Multiple sequence alignment - TraesCS1D01G274700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G274700 chr1D 100.000 3134 0 0 1 3134 370340838 370343971 0.000000e+00 5788.0
1 TraesCS1D01G274700 chr1D 82.833 233 31 6 517 744 470770738 470770966 1.910000e-47 200.0
2 TraesCS1D01G274700 chr1D 92.391 92 7 0 357 448 370915211 370915120 7.050000e-27 132.0
3 TraesCS1D01G274700 chr1B 95.461 2049 65 16 958 2996 493857512 493859542 0.000000e+00 3243.0
4 TraesCS1D01G274700 chr1B 86.486 518 54 15 446 951 493856903 493857416 3.530000e-154 555.0
5 TraesCS1D01G274700 chr1B 79.240 342 46 11 130 448 3267230 3266891 6.810000e-52 215.0
6 TraesCS1D01G274700 chr1B 93.407 91 6 0 357 447 647163705 647163795 5.450000e-28 135.0
7 TraesCS1D01G274700 chr1B 93.103 87 6 0 363 449 647162618 647162532 9.120000e-26 128.0
8 TraesCS1D01G274700 chr1A 90.909 2387 115 46 443 2772 469308972 469311313 0.000000e+00 3112.0
9 TraesCS1D01G274700 chr4A 87.565 579 51 13 1375 1950 590441757 590442317 0.000000e+00 651.0
10 TraesCS1D01G274700 chr4A 89.583 144 14 1 215 357 645339687 645339830 6.900000e-42 182.0
11 TraesCS1D01G274700 chr4A 92.308 91 7 0 8 98 645339381 645339471 2.540000e-26 130.0
12 TraesCS1D01G274700 chr5A 83.242 364 42 10 101 448 533523301 533522941 1.810000e-82 316.0
13 TraesCS1D01G274700 chr5A 83.439 157 10 2 308 448 287619900 287620056 7.050000e-27 132.0
14 TraesCS1D01G274700 chr5A 90.385 104 4 2 2 99 659434580 659434683 7.050000e-27 132.0
15 TraesCS1D01G274700 chr3B 83.384 331 44 10 1261 1587 646003162 646002839 2.360000e-76 296.0
16 TraesCS1D01G274700 chr3B 82.629 213 29 6 521 725 541513566 541513354 6.900000e-42 182.0
17 TraesCS1D01G274700 chr3B 81.250 224 30 6 521 732 431041645 431041868 1.490000e-38 171.0
18 TraesCS1D01G274700 chr3D 84.295 312 32 9 1283 1587 483177333 483177032 3.950000e-74 289.0
19 TraesCS1D01G274700 chr3A 84.194 310 36 11 1283 1587 626016528 626016227 3.950000e-74 289.0
20 TraesCS1D01G274700 chr3A 93.878 98 6 0 2 99 671007227 671007130 7.000000e-32 148.0
21 TraesCS1D01G274700 chr3A 89.855 69 5 2 681 747 49966109 49966041 1.550000e-13 87.9
22 TraesCS1D01G274700 chr4D 85.246 244 22 8 519 749 319269850 319269608 4.040000e-59 239.0
23 TraesCS1D01G274700 chr4B 80.058 346 43 13 130 451 495128013 495128356 1.880000e-57 233.0
24 TraesCS1D01G274700 chr6D 91.925 161 13 0 1290 1450 358326165 358326005 3.140000e-55 226.0
25 TraesCS1D01G274700 chr6D 92.391 92 7 0 357 448 68092222 68092313 7.050000e-27 132.0
26 TraesCS1D01G274700 chr6D 81.461 178 16 4 288 449 143688606 143688430 2.540000e-26 130.0
27 TraesCS1D01G274700 chr6D 87.640 89 11 0 576 664 150779530 150779618 1.540000e-18 104.0
28 TraesCS1D01G274700 chr6A 91.925 161 13 0 1290 1450 500083784 500083624 3.140000e-55 226.0
29 TraesCS1D01G274700 chr6B 79.592 343 43 15 130 448 80053377 80053716 1.460000e-53 220.0
30 TraesCS1D01G274700 chr6B 91.304 161 14 0 1290 1450 539727709 539727549 1.460000e-53 220.0
31 TraesCS1D01G274700 chr6B 96.512 86 3 0 363 448 656201590 656201505 3.260000e-30 143.0
32 TraesCS1D01G274700 chr2D 91.558 154 11 2 1298 1450 32763270 32763422 8.810000e-51 211.0
33 TraesCS1D01G274700 chr2D 91.398 93 8 0 357 449 12874146 12874054 9.120000e-26 128.0
34 TraesCS1D01G274700 chr7D 81.013 237 37 6 521 749 401822684 401822448 6.900000e-42 182.0
35 TraesCS1D01G274700 chr7D 88.043 92 4 5 2 92 334867355 334867270 5.530000e-18 102.0
36 TraesCS1D01G274700 chr2A 92.391 92 7 0 357 448 146076524 146076433 7.050000e-27 132.0
37 TraesCS1D01G274700 chr5B 91.398 93 8 0 2 94 654900477 654900385 9.120000e-26 128.0
38 TraesCS1D01G274700 chr5B 92.593 81 6 0 3042 3122 367517220 367517140 1.970000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G274700 chr1D 370340838 370343971 3133 False 5788 5788 100.0000 1 3134 1 chr1D.!!$F1 3133
1 TraesCS1D01G274700 chr1B 493856903 493859542 2639 False 1899 3243 90.9735 446 2996 2 chr1B.!!$F2 2550
2 TraesCS1D01G274700 chr1A 469308972 469311313 2341 False 3112 3112 90.9090 443 2772 1 chr1A.!!$F1 2329
3 TraesCS1D01G274700 chr4A 590441757 590442317 560 False 651 651 87.5650 1375 1950 1 chr4A.!!$F1 575

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
725 741 0.179059 TGTCATGTGTTCGTGCCACT 60.179 50.0 0.0 0.0 33.92 4.00 F
1201 1324 0.671472 CGCCATGCTGTCTTCTCACA 60.671 55.0 0.0 0.0 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1561 1684 0.762082 TTGCCAACCATGCCTTCCAA 60.762 50.0 0.00 0.0 0.00 3.53 R
3089 3240 0.106217 AATTAATGGGCCGGTCCAGG 60.106 55.0 34.47 0.0 40.56 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 3.083997 GGGACAGTGGAGGCCGAT 61.084 66.667 0.00 0.00 0.00 4.18
39 40 2.187946 GGACAGTGGAGGCCGATG 59.812 66.667 0.00 0.00 0.00 3.84
40 41 2.660064 GGACAGTGGAGGCCGATGT 61.660 63.158 0.00 0.00 0.00 3.06
41 42 1.448540 GACAGTGGAGGCCGATGTG 60.449 63.158 0.00 0.00 0.00 3.21
42 43 2.124983 CAGTGGAGGCCGATGTGG 60.125 66.667 0.00 0.00 42.50 4.17
52 53 2.280389 CGATGTGGCCGGATCTGG 60.280 66.667 16.98 16.98 0.00 3.86
53 54 2.911143 GATGTGGCCGGATCTGGT 59.089 61.111 21.88 0.93 0.00 4.00
54 55 1.224592 GATGTGGCCGGATCTGGTT 59.775 57.895 21.88 2.44 0.00 3.67
55 56 1.077501 ATGTGGCCGGATCTGGTTG 60.078 57.895 21.88 0.00 0.00 3.77
56 57 2.438434 GTGGCCGGATCTGGTTGG 60.438 66.667 21.88 3.56 0.00 3.77
57 58 3.727258 TGGCCGGATCTGGTTGGG 61.727 66.667 21.88 0.00 0.00 4.12
58 59 4.506255 GGCCGGATCTGGTTGGGG 62.506 72.222 21.88 0.00 0.00 4.96
59 60 4.506255 GCCGGATCTGGTTGGGGG 62.506 72.222 21.88 0.00 0.00 5.40
60 61 4.506255 CCGGATCTGGTTGGGGGC 62.506 72.222 12.93 0.00 0.00 5.80
61 62 3.727258 CGGATCTGGTTGGGGGCA 61.727 66.667 0.00 0.00 0.00 5.36
62 63 2.043953 GGATCTGGTTGGGGGCAC 60.044 66.667 0.00 0.00 0.00 5.01
63 64 2.438434 GATCTGGTTGGGGGCACG 60.438 66.667 0.00 0.00 0.00 5.34
64 65 2.933287 ATCTGGTTGGGGGCACGA 60.933 61.111 0.00 0.00 0.00 4.35
65 66 3.268103 ATCTGGTTGGGGGCACGAC 62.268 63.158 0.00 0.00 0.00 4.34
126 127 4.041917 CGGTGCAGCAACGGCAAT 62.042 61.111 25.80 0.00 43.91 3.56
127 128 2.431260 GGTGCAGCAACGGCAATG 60.431 61.111 11.86 0.00 43.91 2.82
128 129 2.431260 GTGCAGCAACGGCAATGG 60.431 61.111 0.00 0.00 43.91 3.16
129 130 4.360964 TGCAGCAACGGCAATGGC 62.361 61.111 0.00 0.00 44.61 4.40
149 150 4.821589 GCCTCTGCCTCGTTCGGG 62.822 72.222 0.00 0.00 0.00 5.14
150 151 4.148825 CCTCTGCCTCGTTCGGGG 62.149 72.222 6.77 6.77 0.00 5.73
151 152 3.382832 CTCTGCCTCGTTCGGGGT 61.383 66.667 12.77 0.00 0.00 4.95
152 153 3.358076 CTCTGCCTCGTTCGGGGTC 62.358 68.421 12.77 5.89 0.00 4.46
153 154 3.691342 CTGCCTCGTTCGGGGTCA 61.691 66.667 12.77 9.86 0.00 4.02
154 155 3.649277 CTGCCTCGTTCGGGGTCAG 62.649 68.421 12.77 14.84 0.00 3.51
155 156 4.452733 GCCTCGTTCGGGGTCAGG 62.453 72.222 12.77 3.10 0.00 3.86
156 157 2.678934 CCTCGTTCGGGGTCAGGA 60.679 66.667 2.62 0.00 0.00 3.86
157 158 2.058595 CCTCGTTCGGGGTCAGGAT 61.059 63.158 2.62 0.00 0.00 3.24
158 159 1.141881 CTCGTTCGGGGTCAGGATG 59.858 63.158 0.00 0.00 37.54 3.51
159 160 2.186903 CGTTCGGGGTCAGGATGG 59.813 66.667 0.00 0.00 36.16 3.51
160 161 2.590092 GTTCGGGGTCAGGATGGG 59.410 66.667 0.00 0.00 36.16 4.00
161 162 2.690881 TTCGGGGTCAGGATGGGG 60.691 66.667 0.00 0.00 36.16 4.96
162 163 4.815973 TCGGGGTCAGGATGGGGG 62.816 72.222 0.00 0.00 36.16 5.40
183 184 4.388499 CCGAGGTTGGGACGGGTG 62.388 72.222 0.00 0.00 42.48 4.61
184 185 4.388499 CGAGGTTGGGACGGGTGG 62.388 72.222 0.00 0.00 0.00 4.61
185 186 3.246880 GAGGTTGGGACGGGTGGT 61.247 66.667 0.00 0.00 0.00 4.16
186 187 3.546714 GAGGTTGGGACGGGTGGTG 62.547 68.421 0.00 0.00 0.00 4.17
187 188 3.881104 GGTTGGGACGGGTGGTGT 61.881 66.667 0.00 0.00 0.00 4.16
188 189 2.281276 GTTGGGACGGGTGGTGTC 60.281 66.667 0.00 0.00 35.60 3.67
189 190 2.446994 TTGGGACGGGTGGTGTCT 60.447 61.111 0.00 0.00 36.58 3.41
190 191 2.813726 TTGGGACGGGTGGTGTCTG 61.814 63.158 0.00 0.00 36.58 3.51
191 192 4.016706 GGGACGGGTGGTGTCTGG 62.017 72.222 0.00 0.00 36.58 3.86
192 193 4.016706 GGACGGGTGGTGTCTGGG 62.017 72.222 0.00 0.00 36.58 4.45
193 194 4.016706 GACGGGTGGTGTCTGGGG 62.017 72.222 0.00 0.00 33.54 4.96
194 195 4.892291 ACGGGTGGTGTCTGGGGT 62.892 66.667 0.00 0.00 0.00 4.95
195 196 4.016706 CGGGTGGTGTCTGGGGTC 62.017 72.222 0.00 0.00 0.00 4.46
196 197 4.016706 GGGTGGTGTCTGGGGTCG 62.017 72.222 0.00 0.00 0.00 4.79
197 198 4.016706 GGTGGTGTCTGGGGTCGG 62.017 72.222 0.00 0.00 0.00 4.79
198 199 4.016706 GTGGTGTCTGGGGTCGGG 62.017 72.222 0.00 0.00 0.00 5.14
199 200 4.242586 TGGTGTCTGGGGTCGGGA 62.243 66.667 0.00 0.00 0.00 5.14
200 201 3.391382 GGTGTCTGGGGTCGGGAG 61.391 72.222 0.00 0.00 0.00 4.30
201 202 3.391382 GTGTCTGGGGTCGGGAGG 61.391 72.222 0.00 0.00 0.00 4.30
202 203 4.715130 TGTCTGGGGTCGGGAGGG 62.715 72.222 0.00 0.00 0.00 4.30
214 215 4.222847 GGAGGGGCGACGATGGTC 62.223 72.222 0.00 0.00 39.89 4.02
222 223 4.203076 GACGATGGTCGGGGTCGG 62.203 72.222 4.28 0.00 45.59 4.79
225 226 2.842936 GATGGTCGGGGTCGGGAT 60.843 66.667 0.00 0.00 36.95 3.85
226 227 3.161450 ATGGTCGGGGTCGGGATG 61.161 66.667 0.00 0.00 36.95 3.51
236 237 4.750695 TCGGGATGGGCCTGGGAA 62.751 66.667 4.53 0.00 43.76 3.97
237 238 4.195334 CGGGATGGGCCTGGGAAG 62.195 72.222 4.53 0.00 39.56 3.46
238 239 4.529731 GGGATGGGCCTGGGAAGC 62.530 72.222 4.53 0.00 36.66 3.86
239 240 3.743017 GGATGGGCCTGGGAAGCA 61.743 66.667 4.53 0.00 0.00 3.91
240 241 2.123982 GATGGGCCTGGGAAGCAG 60.124 66.667 4.53 0.00 0.00 4.24
241 242 3.728292 GATGGGCCTGGGAAGCAGG 62.728 68.421 4.53 0.00 42.56 4.85
244 245 4.120755 GGCCTGGGAAGCAGGGAG 62.121 72.222 0.00 0.00 40.11 4.30
245 246 3.011517 GCCTGGGAAGCAGGGAGA 61.012 66.667 0.00 0.00 40.11 3.71
246 247 3.041469 GCCTGGGAAGCAGGGAGAG 62.041 68.421 0.00 0.00 40.11 3.20
247 248 1.306482 CCTGGGAAGCAGGGAGAGA 60.306 63.158 0.00 0.00 36.22 3.10
248 249 0.911525 CCTGGGAAGCAGGGAGAGAA 60.912 60.000 0.00 0.00 36.22 2.87
249 250 0.987294 CTGGGAAGCAGGGAGAGAAA 59.013 55.000 0.00 0.00 0.00 2.52
250 251 1.563410 CTGGGAAGCAGGGAGAGAAAT 59.437 52.381 0.00 0.00 0.00 2.17
251 252 1.995542 TGGGAAGCAGGGAGAGAAATT 59.004 47.619 0.00 0.00 0.00 1.82
252 253 2.379907 TGGGAAGCAGGGAGAGAAATTT 59.620 45.455 0.00 0.00 0.00 1.82
253 254 2.757314 GGGAAGCAGGGAGAGAAATTTG 59.243 50.000 0.00 0.00 0.00 2.32
254 255 2.757314 GGAAGCAGGGAGAGAAATTTGG 59.243 50.000 0.00 0.00 0.00 3.28
255 256 2.521547 AGCAGGGAGAGAAATTTGGG 57.478 50.000 0.00 0.00 0.00 4.12
256 257 1.006400 AGCAGGGAGAGAAATTTGGGG 59.994 52.381 0.00 0.00 0.00 4.96
257 258 1.961919 GCAGGGAGAGAAATTTGGGGG 60.962 57.143 0.00 0.00 0.00 5.40
258 259 0.336392 AGGGAGAGAAATTTGGGGGC 59.664 55.000 0.00 0.00 0.00 5.80
259 260 0.336392 GGGAGAGAAATTTGGGGGCT 59.664 55.000 0.00 0.00 0.00 5.19
260 261 1.273267 GGGAGAGAAATTTGGGGGCTT 60.273 52.381 0.00 0.00 0.00 4.35
261 262 2.540383 GGAGAGAAATTTGGGGGCTTT 58.460 47.619 0.00 0.00 0.00 3.51
262 263 2.906389 GGAGAGAAATTTGGGGGCTTTT 59.094 45.455 0.00 0.00 0.00 2.27
263 264 3.327757 GGAGAGAAATTTGGGGGCTTTTT 59.672 43.478 0.00 0.00 0.00 1.94
264 265 4.563580 GGAGAGAAATTTGGGGGCTTTTTC 60.564 45.833 0.00 0.00 0.00 2.29
265 266 3.006859 AGAGAAATTTGGGGGCTTTTTCG 59.993 43.478 0.00 0.00 32.84 3.46
266 267 1.804151 GAAATTTGGGGGCTTTTTCGC 59.196 47.619 0.00 0.00 0.00 4.70
267 268 0.761802 AATTTGGGGGCTTTTTCGCA 59.238 45.000 0.00 0.00 0.00 5.10
268 269 0.983467 ATTTGGGGGCTTTTTCGCAT 59.017 45.000 0.00 0.00 0.00 4.73
269 270 0.761802 TTTGGGGGCTTTTTCGCATT 59.238 45.000 0.00 0.00 0.00 3.56
270 271 1.633774 TTGGGGGCTTTTTCGCATTA 58.366 45.000 0.00 0.00 0.00 1.90
271 272 1.633774 TGGGGGCTTTTTCGCATTAA 58.366 45.000 0.00 0.00 0.00 1.40
272 273 1.971357 TGGGGGCTTTTTCGCATTAAA 59.029 42.857 0.00 0.00 0.00 1.52
273 274 2.289133 TGGGGGCTTTTTCGCATTAAAC 60.289 45.455 0.00 0.00 0.00 2.01
274 275 2.343101 GGGGCTTTTTCGCATTAAACC 58.657 47.619 0.00 0.00 0.00 3.27
275 276 2.028476 GGGGCTTTTTCGCATTAAACCT 60.028 45.455 0.00 0.00 0.00 3.50
276 277 3.193903 GGGGCTTTTTCGCATTAAACCTA 59.806 43.478 0.00 0.00 0.00 3.08
277 278 4.421058 GGGCTTTTTCGCATTAAACCTAG 58.579 43.478 0.00 0.00 0.00 3.02
278 279 4.157105 GGGCTTTTTCGCATTAAACCTAGA 59.843 41.667 0.00 0.00 0.00 2.43
279 280 5.163550 GGGCTTTTTCGCATTAAACCTAGAT 60.164 40.000 0.00 0.00 0.00 1.98
280 281 6.330278 GGCTTTTTCGCATTAAACCTAGATT 58.670 36.000 0.00 0.00 0.00 2.40
281 282 6.253512 GGCTTTTTCGCATTAAACCTAGATTG 59.746 38.462 0.00 0.00 0.00 2.67
282 283 6.237569 GCTTTTTCGCATTAAACCTAGATTGC 60.238 38.462 0.00 0.00 0.00 3.56
283 284 6.509418 TTTTCGCATTAAACCTAGATTGCT 57.491 33.333 0.00 0.00 0.00 3.91
284 285 5.484173 TTCGCATTAAACCTAGATTGCTG 57.516 39.130 0.00 0.00 0.00 4.41
285 286 4.513442 TCGCATTAAACCTAGATTGCTGT 58.487 39.130 0.00 0.00 0.00 4.40
286 287 4.332543 TCGCATTAAACCTAGATTGCTGTG 59.667 41.667 0.00 0.00 0.00 3.66
287 288 4.354587 GCATTAAACCTAGATTGCTGTGC 58.645 43.478 0.00 0.00 0.00 4.57
288 289 4.734695 GCATTAAACCTAGATTGCTGTGCC 60.735 45.833 0.00 0.00 0.00 5.01
289 290 2.584835 AAACCTAGATTGCTGTGCCA 57.415 45.000 0.00 0.00 0.00 4.92
290 291 1.826385 AACCTAGATTGCTGTGCCAC 58.174 50.000 0.00 0.00 0.00 5.01
291 292 0.391661 ACCTAGATTGCTGTGCCACG 60.392 55.000 0.00 0.00 0.00 4.94
292 293 0.391661 CCTAGATTGCTGTGCCACGT 60.392 55.000 0.00 0.00 0.00 4.49
293 294 1.134818 CCTAGATTGCTGTGCCACGTA 60.135 52.381 0.00 0.00 0.00 3.57
294 295 2.616960 CTAGATTGCTGTGCCACGTAA 58.383 47.619 0.00 0.00 0.00 3.18
296 297 0.179189 GATTGCTGTGCCACGTAAGC 60.179 55.000 2.88 2.88 45.62 3.09
297 298 0.888736 ATTGCTGTGCCACGTAAGCA 60.889 50.000 8.27 8.27 43.60 3.91
298 299 1.506309 TTGCTGTGCCACGTAAGCAG 61.506 55.000 12.33 8.16 45.68 4.24
299 300 1.667830 GCTGTGCCACGTAAGCAGA 60.668 57.895 12.33 10.52 41.87 4.26
300 301 1.227999 GCTGTGCCACGTAAGCAGAA 61.228 55.000 12.33 4.24 41.87 3.02
301 302 1.225855 CTGTGCCACGTAAGCAGAAA 58.774 50.000 12.33 2.04 41.87 2.52
302 303 1.601903 CTGTGCCACGTAAGCAGAAAA 59.398 47.619 12.33 0.00 41.87 2.29
303 304 1.332375 TGTGCCACGTAAGCAGAAAAC 59.668 47.619 12.33 2.22 41.87 2.43
304 305 0.584396 TGCCACGTAAGCAGAAAACG 59.416 50.000 8.27 0.00 45.62 3.60
310 311 1.728425 CGTAAGCAGAAAACGTACCCC 59.272 52.381 0.00 0.00 32.16 4.95
311 312 2.769893 GTAAGCAGAAAACGTACCCCA 58.230 47.619 0.00 0.00 0.00 4.96
312 313 2.579410 AAGCAGAAAACGTACCCCAT 57.421 45.000 0.00 0.00 0.00 4.00
313 314 2.109425 AGCAGAAAACGTACCCCATC 57.891 50.000 0.00 0.00 0.00 3.51
314 315 1.628846 AGCAGAAAACGTACCCCATCT 59.371 47.619 0.00 0.00 0.00 2.90
315 316 2.835764 AGCAGAAAACGTACCCCATCTA 59.164 45.455 0.00 0.00 0.00 1.98
316 317 3.454812 AGCAGAAAACGTACCCCATCTAT 59.545 43.478 0.00 0.00 0.00 1.98
317 318 3.808174 GCAGAAAACGTACCCCATCTATC 59.192 47.826 0.00 0.00 0.00 2.08
318 319 4.682320 GCAGAAAACGTACCCCATCTATCA 60.682 45.833 0.00 0.00 0.00 2.15
319 320 5.611374 CAGAAAACGTACCCCATCTATCAT 58.389 41.667 0.00 0.00 0.00 2.45
320 321 6.740401 GCAGAAAACGTACCCCATCTATCATA 60.740 42.308 0.00 0.00 0.00 2.15
321 322 7.214381 CAGAAAACGTACCCCATCTATCATAA 58.786 38.462 0.00 0.00 0.00 1.90
322 323 7.713507 CAGAAAACGTACCCCATCTATCATAAA 59.286 37.037 0.00 0.00 0.00 1.40
323 324 7.713942 AGAAAACGTACCCCATCTATCATAAAC 59.286 37.037 0.00 0.00 0.00 2.01
324 325 5.130292 ACGTACCCCATCTATCATAAACG 57.870 43.478 0.00 0.00 0.00 3.60
325 326 3.924686 CGTACCCCATCTATCATAAACGC 59.075 47.826 0.00 0.00 0.00 4.84
326 327 4.559906 CGTACCCCATCTATCATAAACGCA 60.560 45.833 0.00 0.00 0.00 5.24
327 328 3.740115 ACCCCATCTATCATAAACGCAC 58.260 45.455 0.00 0.00 0.00 5.34
328 329 3.391296 ACCCCATCTATCATAAACGCACT 59.609 43.478 0.00 0.00 0.00 4.40
329 330 4.141482 ACCCCATCTATCATAAACGCACTT 60.141 41.667 0.00 0.00 0.00 3.16
330 331 5.071250 ACCCCATCTATCATAAACGCACTTA 59.929 40.000 0.00 0.00 0.00 2.24
331 332 5.995282 CCCCATCTATCATAAACGCACTTAA 59.005 40.000 0.00 0.00 0.00 1.85
332 333 6.485313 CCCCATCTATCATAAACGCACTTAAA 59.515 38.462 0.00 0.00 0.00 1.52
333 334 7.352739 CCCATCTATCATAAACGCACTTAAAC 58.647 38.462 0.00 0.00 0.00 2.01
334 335 7.063456 CCATCTATCATAAACGCACTTAAACG 58.937 38.462 0.00 0.00 0.00 3.60
335 336 7.042992 CCATCTATCATAAACGCACTTAAACGA 60.043 37.037 0.00 0.00 0.00 3.85
336 337 7.445900 TCTATCATAAACGCACTTAAACGAG 57.554 36.000 0.00 0.00 0.00 4.18
337 338 4.316375 TCATAAACGCACTTAAACGAGC 57.684 40.909 0.00 0.00 0.00 5.03
338 339 3.123959 TCATAAACGCACTTAAACGAGCC 59.876 43.478 0.00 0.00 0.00 4.70
339 340 1.301423 AAACGCACTTAAACGAGCCA 58.699 45.000 0.00 0.00 0.00 4.75
340 341 1.301423 AACGCACTTAAACGAGCCAA 58.699 45.000 0.00 0.00 0.00 4.52
341 342 1.301423 ACGCACTTAAACGAGCCAAA 58.699 45.000 0.00 0.00 0.00 3.28
342 343 1.877443 ACGCACTTAAACGAGCCAAAT 59.123 42.857 0.00 0.00 0.00 2.32
343 344 2.095919 ACGCACTTAAACGAGCCAAATC 60.096 45.455 0.00 0.00 0.00 2.17
344 345 2.727916 CGCACTTAAACGAGCCAAATCC 60.728 50.000 0.00 0.00 0.00 3.01
345 346 2.727916 GCACTTAAACGAGCCAAATCCG 60.728 50.000 0.00 0.00 0.00 4.18
346 347 1.467342 ACTTAAACGAGCCAAATCCGC 59.533 47.619 0.00 0.00 0.00 5.54
347 348 0.806241 TTAAACGAGCCAAATCCGCC 59.194 50.000 0.00 0.00 0.00 6.13
348 349 1.363145 TAAACGAGCCAAATCCGCCG 61.363 55.000 0.00 0.00 0.00 6.46
349 350 3.599285 AACGAGCCAAATCCGCCGA 62.599 57.895 0.00 0.00 0.00 5.54
350 351 2.588877 CGAGCCAAATCCGCCGAT 60.589 61.111 0.00 0.00 0.00 4.18
351 352 2.598632 CGAGCCAAATCCGCCGATC 61.599 63.158 0.00 0.00 0.00 3.69
352 353 1.523711 GAGCCAAATCCGCCGATCA 60.524 57.895 0.00 0.00 0.00 2.92
353 354 0.886490 GAGCCAAATCCGCCGATCAT 60.886 55.000 0.00 0.00 0.00 2.45
354 355 0.466189 AGCCAAATCCGCCGATCATT 60.466 50.000 0.00 0.00 0.00 2.57
355 356 0.318107 GCCAAATCCGCCGATCATTG 60.318 55.000 0.00 0.00 0.00 2.82
356 357 1.024271 CCAAATCCGCCGATCATTGT 58.976 50.000 0.00 0.00 0.00 2.71
357 358 2.217750 CCAAATCCGCCGATCATTGTA 58.782 47.619 0.00 0.00 0.00 2.41
358 359 2.032030 CCAAATCCGCCGATCATTGTAC 60.032 50.000 0.00 0.00 0.00 2.90
359 360 2.611751 CAAATCCGCCGATCATTGTACA 59.388 45.455 0.00 0.00 0.00 2.90
360 361 1.865865 ATCCGCCGATCATTGTACAC 58.134 50.000 0.00 0.00 0.00 2.90
361 362 0.533032 TCCGCCGATCATTGTACACA 59.467 50.000 0.00 0.00 0.00 3.72
362 363 1.066787 TCCGCCGATCATTGTACACAA 60.067 47.619 0.00 0.00 40.51 3.33
363 364 1.327460 CCGCCGATCATTGTACACAAG 59.673 52.381 0.00 0.00 39.47 3.16
364 365 2.267426 CGCCGATCATTGTACACAAGA 58.733 47.619 0.00 0.00 39.47 3.02
365 366 2.866156 CGCCGATCATTGTACACAAGAT 59.134 45.455 0.00 0.00 39.47 2.40
366 367 3.302675 CGCCGATCATTGTACACAAGATG 60.303 47.826 0.00 0.00 39.47 2.90
367 368 3.623060 GCCGATCATTGTACACAAGATGT 59.377 43.478 0.00 0.00 46.06 3.06
379 380 3.374745 CACAAGATGTGGTGTTTTCTGC 58.625 45.455 2.56 0.00 44.27 4.26
380 381 3.023119 ACAAGATGTGGTGTTTTCTGCA 58.977 40.909 0.00 0.00 0.00 4.41
381 382 3.067180 ACAAGATGTGGTGTTTTCTGCAG 59.933 43.478 7.63 7.63 0.00 4.41
382 383 3.213206 AGATGTGGTGTTTTCTGCAGA 57.787 42.857 13.74 13.74 0.00 4.26
383 384 3.144506 AGATGTGGTGTTTTCTGCAGAG 58.855 45.455 17.43 0.00 0.00 3.35
384 385 2.708216 TGTGGTGTTTTCTGCAGAGA 57.292 45.000 17.43 10.10 0.00 3.10
385 386 2.997980 TGTGGTGTTTTCTGCAGAGAA 58.002 42.857 17.43 16.28 36.36 2.87
386 387 3.351740 TGTGGTGTTTTCTGCAGAGAAA 58.648 40.909 20.24 17.53 44.83 2.52
387 388 3.128589 TGTGGTGTTTTCTGCAGAGAAAC 59.871 43.478 28.61 28.61 45.90 2.78
388 389 3.378427 GTGGTGTTTTCTGCAGAGAAACT 59.622 43.478 31.48 0.00 45.90 2.66
389 390 3.378112 TGGTGTTTTCTGCAGAGAAACTG 59.622 43.478 31.48 7.31 45.90 3.16
390 391 3.378427 GGTGTTTTCTGCAGAGAAACTGT 59.622 43.478 31.48 0.00 45.90 3.55
391 392 4.574828 GGTGTTTTCTGCAGAGAAACTGTA 59.425 41.667 31.48 20.58 45.90 2.74
392 393 5.239525 GGTGTTTTCTGCAGAGAAACTGTAT 59.760 40.000 31.48 0.00 45.90 2.29
393 394 6.366630 GTGTTTTCTGCAGAGAAACTGTATC 58.633 40.000 31.48 18.12 45.90 2.24
394 395 5.470098 TGTTTTCTGCAGAGAAACTGTATCC 59.530 40.000 31.48 17.63 45.90 2.59
395 396 5.703130 GTTTTCTGCAGAGAAACTGTATCCT 59.297 40.000 28.33 0.00 45.90 3.24
396 397 6.874134 GTTTTCTGCAGAGAAACTGTATCCTA 59.126 38.462 28.33 8.44 45.90 2.94
397 398 7.064016 GTTTTCTGCAGAGAAACTGTATCCTAG 59.936 40.741 28.33 0.53 45.90 3.02
398 399 7.795129 TTTTCTGCAGAGAAACTGTATCCTAGG 60.795 40.741 16.75 0.82 45.90 3.02
401 402 5.941555 CAGAGAAACTGTATCCTAGGGTT 57.058 43.478 9.46 1.40 41.30 4.11
402 403 6.301169 CAGAGAAACTGTATCCTAGGGTTT 57.699 41.667 9.46 10.71 41.30 3.27
403 404 6.712276 CAGAGAAACTGTATCCTAGGGTTTT 58.288 40.000 9.46 0.00 41.30 2.43
404 405 7.168905 CAGAGAAACTGTATCCTAGGGTTTTT 58.831 38.462 9.46 6.16 41.30 1.94
405 406 7.334671 CAGAGAAACTGTATCCTAGGGTTTTTC 59.665 40.741 9.46 14.27 41.30 2.29
406 407 6.171213 AGAAACTGTATCCTAGGGTTTTTCG 58.829 40.000 9.46 0.00 31.51 3.46
407 408 3.870274 ACTGTATCCTAGGGTTTTTCGC 58.130 45.455 9.46 0.00 0.00 4.70
408 409 3.262405 ACTGTATCCTAGGGTTTTTCGCA 59.738 43.478 9.46 0.00 0.00 5.10
409 410 4.258543 CTGTATCCTAGGGTTTTTCGCAA 58.741 43.478 9.46 0.00 0.00 4.85
410 411 4.653868 TGTATCCTAGGGTTTTTCGCAAA 58.346 39.130 9.46 0.00 0.00 3.68
411 412 4.456566 TGTATCCTAGGGTTTTTCGCAAAC 59.543 41.667 9.46 0.00 0.00 2.93
412 413 3.217681 TCCTAGGGTTTTTCGCAAACT 57.782 42.857 9.46 0.00 0.00 2.66
413 414 3.558033 TCCTAGGGTTTTTCGCAAACTT 58.442 40.909 9.46 3.00 0.00 2.66
414 415 4.716794 TCCTAGGGTTTTTCGCAAACTTA 58.283 39.130 9.46 3.75 0.00 2.24
415 416 4.758165 TCCTAGGGTTTTTCGCAAACTTAG 59.242 41.667 9.46 10.30 0.00 2.18
416 417 3.364889 AGGGTTTTTCGCAAACTTAGC 57.635 42.857 9.17 0.00 0.00 3.09
417 418 2.035449 AGGGTTTTTCGCAAACTTAGCC 59.965 45.455 9.17 1.48 0.00 3.93
418 419 2.400399 GGTTTTTCGCAAACTTAGCCC 58.600 47.619 9.17 0.00 0.00 5.19
419 420 2.035449 GGTTTTTCGCAAACTTAGCCCT 59.965 45.455 9.17 0.00 0.00 5.19
420 421 3.305964 GTTTTTCGCAAACTTAGCCCTC 58.694 45.455 3.51 0.00 0.00 4.30
421 422 2.264005 TTTCGCAAACTTAGCCCTCA 57.736 45.000 0.00 0.00 0.00 3.86
422 423 2.264005 TTCGCAAACTTAGCCCTCAA 57.736 45.000 0.00 0.00 0.00 3.02
423 424 2.264005 TCGCAAACTTAGCCCTCAAA 57.736 45.000 0.00 0.00 0.00 2.69
424 425 2.577700 TCGCAAACTTAGCCCTCAAAA 58.422 42.857 0.00 0.00 0.00 2.44
425 426 3.153919 TCGCAAACTTAGCCCTCAAAAT 58.846 40.909 0.00 0.00 0.00 1.82
426 427 3.057596 TCGCAAACTTAGCCCTCAAAATG 60.058 43.478 0.00 0.00 0.00 2.32
427 428 3.057596 CGCAAACTTAGCCCTCAAAATGA 60.058 43.478 0.00 0.00 0.00 2.57
428 429 4.380867 CGCAAACTTAGCCCTCAAAATGAT 60.381 41.667 0.00 0.00 0.00 2.45
429 430 4.866486 GCAAACTTAGCCCTCAAAATGATG 59.134 41.667 0.00 0.00 0.00 3.07
430 431 5.413499 CAAACTTAGCCCTCAAAATGATGG 58.587 41.667 0.00 0.00 35.58 3.51
431 432 4.322057 ACTTAGCCCTCAAAATGATGGT 57.678 40.909 4.05 0.00 35.03 3.55
432 433 4.677182 ACTTAGCCCTCAAAATGATGGTT 58.323 39.130 4.05 0.97 35.03 3.67
433 434 5.086621 ACTTAGCCCTCAAAATGATGGTTT 58.913 37.500 4.05 0.00 35.03 3.27
434 435 5.543790 ACTTAGCCCTCAAAATGATGGTTTT 59.456 36.000 4.05 0.00 35.03 2.43
435 436 6.723977 ACTTAGCCCTCAAAATGATGGTTTTA 59.276 34.615 4.05 0.00 35.03 1.52
436 437 7.400052 ACTTAGCCCTCAAAATGATGGTTTTAT 59.600 33.333 4.05 0.00 35.03 1.40
437 438 5.981174 AGCCCTCAAAATGATGGTTTTATG 58.019 37.500 4.05 0.00 35.03 1.90
438 439 4.571984 GCCCTCAAAATGATGGTTTTATGC 59.428 41.667 4.05 0.00 35.03 3.14
439 440 5.732633 CCCTCAAAATGATGGTTTTATGCA 58.267 37.500 0.00 0.00 29.02 3.96
440 441 6.171921 CCCTCAAAATGATGGTTTTATGCAA 58.828 36.000 0.00 0.00 29.02 4.08
441 442 6.824704 CCCTCAAAATGATGGTTTTATGCAAT 59.175 34.615 0.00 0.00 29.02 3.56
442 443 7.337436 CCCTCAAAATGATGGTTTTATGCAATT 59.663 33.333 0.00 0.00 29.02 2.32
443 444 8.732531 CCTCAAAATGATGGTTTTATGCAATTT 58.267 29.630 0.00 0.00 30.56 1.82
448 449 8.947055 AATGATGGTTTTATGCAATTTACTCC 57.053 30.769 0.00 0.00 0.00 3.85
449 450 6.559810 TGATGGTTTTATGCAATTTACTCCG 58.440 36.000 0.00 0.00 0.00 4.63
450 451 5.968528 TGGTTTTATGCAATTTACTCCGT 57.031 34.783 0.00 0.00 0.00 4.69
506 510 1.035932 TAGTCAGTCCTAGCCGTGGC 61.036 60.000 1.67 1.67 42.33 5.01
554 566 2.112297 ACACCCGTGGCACGAAAT 59.888 55.556 38.91 21.43 46.05 2.17
559 571 1.087771 CCCGTGGCACGAAATACTCC 61.088 60.000 38.91 0.00 46.05 3.85
561 573 1.418342 CGTGGCACGAAATACTCCGG 61.418 60.000 34.85 0.00 46.05 5.14
572 587 4.083484 CGAAATACTCCGGCTTGACTTTTT 60.083 41.667 0.00 0.00 0.00 1.94
634 649 3.383185 ACTGAAACTTGCCATCCGAAAAA 59.617 39.130 0.00 0.00 0.00 1.94
642 657 2.288152 TGCCATCCGAAAAAGAAGTTGC 60.288 45.455 0.00 0.00 0.00 4.17
643 658 2.288152 GCCATCCGAAAAAGAAGTTGCA 60.288 45.455 0.00 0.00 0.00 4.08
657 672 3.806625 AGTTGCAATGCTTGACAACTT 57.193 38.095 19.74 11.96 46.10 2.66
660 675 5.043248 AGTTGCAATGCTTGACAACTTAAC 58.957 37.500 19.74 0.00 46.10 2.01
693 708 3.815962 TGCGTCACTAAACTTGCCATAAA 59.184 39.130 0.00 0.00 0.00 1.40
725 741 0.179059 TGTCATGTGTTCGTGCCACT 60.179 50.000 0.00 0.00 33.92 4.00
732 748 1.590525 GTTCGTGCCACTCGTGTGA 60.591 57.895 18.71 0.00 46.55 3.58
753 774 5.416271 GACACTTATCAGGGTCCTTTGTA 57.584 43.478 0.00 0.00 46.65 2.41
757 778 7.924541 ACACTTATCAGGGTCCTTTGTATTTA 58.075 34.615 0.00 0.00 25.34 1.40
819 843 5.172951 TGCAAAATTCGTGAGTTCAAAATCG 59.827 36.000 0.00 0.00 0.00 3.34
893 918 1.669115 CCACAAGCACCAGGAGACG 60.669 63.158 0.00 0.00 0.00 4.18
897 922 2.210013 AAGCACCAGGAGACGCTGA 61.210 57.895 0.00 0.00 34.26 4.26
948 973 3.276846 GCAACAACTCGCCACGGT 61.277 61.111 0.00 0.00 0.00 4.83
1201 1324 0.671472 CGCCATGCTGTCTTCTCACA 60.671 55.000 0.00 0.00 0.00 3.58
1683 1809 4.322049 GCACTGCTCTACTCCAAGTTCTTA 60.322 45.833 0.00 0.00 0.00 2.10
1689 1815 5.148651 TCTACTCCAAGTTCTTAAGCCAC 57.851 43.478 0.00 0.00 0.00 5.01
1695 1821 0.038310 AGTTCTTAAGCCACCAGCCC 59.962 55.000 0.00 0.00 45.47 5.19
1795 1921 4.601794 CCAGCCCAGGCCAACACA 62.602 66.667 5.01 0.00 43.17 3.72
1797 1923 3.177884 AGCCCAGGCCAACACAGA 61.178 61.111 5.01 0.00 43.17 3.41
1862 1988 2.887568 GACGATGCTCCAGTGCGG 60.888 66.667 0.00 0.00 35.36 5.69
2161 2290 2.148916 TCAAGCTCGTTGATTCGTGT 57.851 45.000 0.00 0.00 40.45 4.49
2188 2317 4.084507 CGCTGTTCTCGTGATTGATTTTC 58.915 43.478 0.00 0.00 0.00 2.29
2212 2341 6.502158 TCTGTCTTTTCTTTTCCTCTCCCTAT 59.498 38.462 0.00 0.00 0.00 2.57
2293 2428 7.349859 AGGAGTATACATGTGGGATAAAAAGGA 59.650 37.037 9.11 0.00 0.00 3.36
2305 2440 8.837389 GTGGGATAAAAAGGATGTACTGTAATC 58.163 37.037 0.00 0.00 0.00 1.75
2379 2520 2.329379 CTGTTCTGAGCTACACGTTCC 58.671 52.381 0.00 0.00 0.00 3.62
2624 2775 2.554785 GGCCCTAGCTCGTTATAGAGGA 60.555 54.545 0.00 0.00 38.63 3.71
2772 2923 3.642705 TCACTGTCATCGTCTTCAACAG 58.357 45.455 0.00 0.00 42.33 3.16
2811 2962 4.381185 GCGGTTATTTTTAAGAACAGGGGG 60.381 45.833 0.00 0.00 0.00 5.40
2813 2964 4.528987 GGTTATTTTTAAGAACAGGGGGCA 59.471 41.667 0.00 0.00 0.00 5.36
2818 2969 4.681074 TTTAAGAACAGGGGGCAAAAAG 57.319 40.909 0.00 0.00 0.00 2.27
2837 2988 5.695851 AAAGGAGTAACAACTTGCATCAG 57.304 39.130 0.00 0.00 0.00 2.90
2848 2999 4.038271 ACTTGCATCAGAAGGGAAATCA 57.962 40.909 0.00 0.00 0.00 2.57
2850 3001 4.263639 ACTTGCATCAGAAGGGAAATCAGA 60.264 41.667 0.00 0.00 0.00 3.27
2896 3047 2.096013 GCCTTCCGTAGAATTTCACAGC 59.904 50.000 0.00 0.00 0.00 4.40
2918 3069 5.637810 AGCAAAATCGTTCGAGTGATAAAGA 59.362 36.000 0.80 0.00 0.00 2.52
2919 3070 6.313905 AGCAAAATCGTTCGAGTGATAAAGAT 59.686 34.615 0.80 0.00 0.00 2.40
2920 3071 6.409185 GCAAAATCGTTCGAGTGATAAAGATG 59.591 38.462 0.80 0.82 0.00 2.90
2921 3072 6.589830 AAATCGTTCGAGTGATAAAGATGG 57.410 37.500 0.80 0.00 0.00 3.51
2928 3079 5.340803 TCGAGTGATAAAGATGGAAACGAG 58.659 41.667 0.00 0.00 0.00 4.18
2996 3147 1.488957 GAACAGAGTTCACGCTGCG 59.511 57.895 21.91 21.91 45.78 5.18
2997 3148 1.215655 GAACAGAGTTCACGCTGCGT 61.216 55.000 23.57 23.57 45.78 5.24
2998 3149 1.215655 AACAGAGTTCACGCTGCGTC 61.216 55.000 26.49 14.54 45.78 5.19
2999 3150 1.372251 CAGAGTTCACGCTGCGTCT 60.372 57.895 26.49 19.40 38.32 4.18
3000 3151 1.372251 AGAGTTCACGCTGCGTCTG 60.372 57.895 26.49 15.56 38.32 3.51
3001 3152 1.371758 GAGTTCACGCTGCGTCTGA 60.372 57.895 26.49 17.80 38.32 3.27
3002 3153 0.939577 GAGTTCACGCTGCGTCTGAA 60.940 55.000 26.49 22.55 38.32 3.02
3003 3154 0.529773 AGTTCACGCTGCGTCTGAAA 60.530 50.000 26.49 13.94 38.32 2.69
3004 3155 0.303493 GTTCACGCTGCGTCTGAAAA 59.697 50.000 26.49 11.48 38.32 2.29
3005 3156 0.303493 TTCACGCTGCGTCTGAAAAC 59.697 50.000 26.49 0.00 38.32 2.43
3006 3157 1.437089 CACGCTGCGTCTGAAAACG 60.437 57.895 26.49 7.64 45.31 3.60
3007 3158 1.590525 ACGCTGCGTCTGAAAACGA 60.591 52.632 23.57 0.00 45.37 3.85
3008 3159 1.149361 ACGCTGCGTCTGAAAACGAA 61.149 50.000 23.57 0.00 45.37 3.85
3013 3164 4.446857 CTGCGTCTGAAAACGAAGTAAA 57.553 40.909 0.00 0.00 45.00 2.01
3014 3165 4.446234 CTGCGTCTGAAAACGAAGTAAAG 58.554 43.478 0.00 0.00 45.00 1.85
3015 3166 3.246699 TGCGTCTGAAAACGAAGTAAAGG 59.753 43.478 0.00 0.00 45.00 3.11
3016 3167 3.363673 GCGTCTGAAAACGAAGTAAAGGG 60.364 47.826 0.00 0.00 45.00 3.95
3017 3168 3.185797 CGTCTGAAAACGAAGTAAAGGGG 59.814 47.826 0.00 0.00 45.00 4.79
3018 3169 3.058432 GTCTGAAAACGAAGTAAAGGGGC 60.058 47.826 0.00 0.00 45.00 5.80
3019 3170 2.882137 CTGAAAACGAAGTAAAGGGGCA 59.118 45.455 0.00 0.00 45.00 5.36
3020 3171 3.288964 TGAAAACGAAGTAAAGGGGCAA 58.711 40.909 0.00 0.00 45.00 4.52
3021 3172 3.700038 TGAAAACGAAGTAAAGGGGCAAA 59.300 39.130 0.00 0.00 45.00 3.68
3022 3173 4.342665 TGAAAACGAAGTAAAGGGGCAAAT 59.657 37.500 0.00 0.00 45.00 2.32
3023 3174 4.514781 AAACGAAGTAAAGGGGCAAATC 57.485 40.909 0.00 0.00 45.00 2.17
3024 3175 2.443416 ACGAAGTAAAGGGGCAAATCC 58.557 47.619 0.00 0.00 41.94 3.01
3025 3176 2.041216 ACGAAGTAAAGGGGCAAATCCT 59.959 45.455 0.00 0.00 41.94 3.24
3026 3177 3.264964 ACGAAGTAAAGGGGCAAATCCTA 59.735 43.478 0.00 0.00 41.94 2.94
3027 3178 4.079958 ACGAAGTAAAGGGGCAAATCCTAT 60.080 41.667 0.00 0.00 41.94 2.57
3028 3179 4.887655 CGAAGTAAAGGGGCAAATCCTATT 59.112 41.667 0.00 0.00 33.58 1.73
3029 3180 5.359860 CGAAGTAAAGGGGCAAATCCTATTT 59.640 40.000 0.00 0.00 33.58 1.40
3030 3181 6.544928 AAGTAAAGGGGCAAATCCTATTTG 57.455 37.500 7.80 7.80 33.58 2.32
3031 3182 4.962362 AGTAAAGGGGCAAATCCTATTTGG 59.038 41.667 12.82 0.00 33.58 3.28
3034 3185 3.272766 GGCAAATCCTATTTGGCGC 57.727 52.632 19.05 0.00 43.33 6.53
3035 3186 0.746659 GGCAAATCCTATTTGGCGCT 59.253 50.000 19.05 0.00 43.33 5.92
3036 3187 1.536709 GGCAAATCCTATTTGGCGCTG 60.537 52.381 19.05 0.00 43.33 5.18
3037 3188 1.536709 GCAAATCCTATTTGGCGCTGG 60.537 52.381 7.64 0.49 35.26 4.85
3038 3189 1.750778 CAAATCCTATTTGGCGCTGGT 59.249 47.619 7.64 0.00 35.26 4.00
3039 3190 2.143876 AATCCTATTTGGCGCTGGTT 57.856 45.000 7.64 0.00 35.26 3.67
3040 3191 3.290948 AATCCTATTTGGCGCTGGTTA 57.709 42.857 7.64 0.00 35.26 2.85
3041 3192 2.791347 TCCTATTTGGCGCTGGTTAA 57.209 45.000 7.64 0.00 35.26 2.01
3042 3193 2.361789 TCCTATTTGGCGCTGGTTAAC 58.638 47.619 7.64 0.00 35.26 2.01
3043 3194 1.063469 CCTATTTGGCGCTGGTTAACG 59.937 52.381 7.64 0.00 0.00 3.18
3044 3195 1.735571 CTATTTGGCGCTGGTTAACGT 59.264 47.619 7.64 0.00 0.00 3.99
3045 3196 0.239879 ATTTGGCGCTGGTTAACGTG 59.760 50.000 7.64 0.00 0.00 4.49
3046 3197 2.395367 TTTGGCGCTGGTTAACGTGC 62.395 55.000 7.64 9.69 36.00 5.34
3047 3198 3.350612 GGCGCTGGTTAACGTGCA 61.351 61.111 17.17 2.86 38.34 4.57
3048 3199 2.686816 GGCGCTGGTTAACGTGCAT 61.687 57.895 17.17 0.00 38.34 3.96
3049 3200 1.209127 GCGCTGGTTAACGTGCATT 59.791 52.632 17.48 0.00 36.69 3.56
3050 3201 0.386731 GCGCTGGTTAACGTGCATTT 60.387 50.000 17.48 0.00 36.69 2.32
3051 3202 1.326576 CGCTGGTTAACGTGCATTTG 58.673 50.000 17.48 2.48 0.00 2.32
3052 3203 1.696988 GCTGGTTAACGTGCATTTGG 58.303 50.000 14.05 0.00 0.00 3.28
3053 3204 1.000717 GCTGGTTAACGTGCATTTGGT 60.001 47.619 14.05 0.00 0.00 3.67
3054 3205 2.544903 GCTGGTTAACGTGCATTTGGTT 60.545 45.455 14.05 0.00 0.00 3.67
3055 3206 3.304794 GCTGGTTAACGTGCATTTGGTTA 60.305 43.478 14.05 0.00 0.00 2.85
3056 3207 4.793353 GCTGGTTAACGTGCATTTGGTTAA 60.793 41.667 14.05 9.72 34.69 2.01
3058 3209 4.854780 GTTAACGTGCATTTGGTTAACG 57.145 40.909 20.03 7.68 43.19 3.18
3059 3210 2.409152 AACGTGCATTTGGTTAACGG 57.591 45.000 0.00 0.00 38.52 4.44
3060 3211 0.594110 ACGTGCATTTGGTTAACGGG 59.406 50.000 0.00 0.00 38.52 5.28
3061 3212 0.731174 CGTGCATTTGGTTAACGGGC 60.731 55.000 0.00 0.00 0.00 6.13
3062 3213 0.315568 GTGCATTTGGTTAACGGGCA 59.684 50.000 0.00 2.22 0.00 5.36
3063 3214 0.315568 TGCATTTGGTTAACGGGCAC 59.684 50.000 0.00 0.00 0.00 5.01
3083 3234 3.423154 GCAGCGTGCACCACCTAC 61.423 66.667 12.15 0.00 44.26 3.18
3084 3235 2.742372 CAGCGTGCACCACCTACC 60.742 66.667 12.15 0.00 0.00 3.18
3085 3236 4.373116 AGCGTGCACCACCTACCG 62.373 66.667 12.15 0.00 0.00 4.02
3088 3239 4.367023 GTGCACCACCTACCGCGA 62.367 66.667 8.23 0.00 0.00 5.87
3089 3240 4.367023 TGCACCACCTACCGCGAC 62.367 66.667 8.23 0.00 0.00 5.19
3091 3242 3.379445 CACCACCTACCGCGACCT 61.379 66.667 8.23 0.00 0.00 3.85
3092 3243 3.379445 ACCACCTACCGCGACCTG 61.379 66.667 8.23 0.00 0.00 4.00
3093 3244 4.143333 CCACCTACCGCGACCTGG 62.143 72.222 8.23 6.78 0.00 4.45
3094 3245 3.066190 CACCTACCGCGACCTGGA 61.066 66.667 8.23 0.00 0.00 3.86
3095 3246 3.066814 ACCTACCGCGACCTGGAC 61.067 66.667 8.23 0.00 0.00 4.02
3096 3247 3.834799 CCTACCGCGACCTGGACC 61.835 72.222 8.23 0.00 0.00 4.46
3097 3248 4.189188 CTACCGCGACCTGGACCG 62.189 72.222 8.23 4.72 0.00 4.79
3104 3255 3.728373 GACCTGGACCGGCCCATT 61.728 66.667 11.03 0.00 35.33 3.16
3105 3256 2.285818 ACCTGGACCGGCCCATTA 60.286 61.111 11.03 0.00 35.33 1.90
3106 3257 1.917336 GACCTGGACCGGCCCATTAA 61.917 60.000 11.03 0.00 35.33 1.40
3107 3258 1.286305 ACCTGGACCGGCCCATTAAT 61.286 55.000 11.03 0.00 35.33 1.40
3108 3259 0.106217 CCTGGACCGGCCCATTAATT 60.106 55.000 11.03 0.00 35.33 1.40
3109 3260 1.687996 CCTGGACCGGCCCATTAATTT 60.688 52.381 11.03 0.00 35.33 1.82
3110 3261 2.423660 CCTGGACCGGCCCATTAATTTA 60.424 50.000 11.03 0.00 35.33 1.40
3111 3262 2.621526 CTGGACCGGCCCATTAATTTAC 59.378 50.000 11.03 0.00 35.33 2.01
3112 3263 1.605232 GGACCGGCCCATTAATTTACG 59.395 52.381 0.00 0.00 0.00 3.18
3113 3264 2.291365 GACCGGCCCATTAATTTACGT 58.709 47.619 0.00 0.00 0.00 3.57
3114 3265 2.684374 GACCGGCCCATTAATTTACGTT 59.316 45.455 0.00 0.00 0.00 3.99
3115 3266 2.684374 ACCGGCCCATTAATTTACGTTC 59.316 45.455 0.00 0.00 0.00 3.95
3116 3267 2.946990 CCGGCCCATTAATTTACGTTCT 59.053 45.455 0.00 0.00 0.00 3.01
3117 3268 3.002965 CCGGCCCATTAATTTACGTTCTC 59.997 47.826 0.00 0.00 0.00 2.87
3118 3269 3.623960 CGGCCCATTAATTTACGTTCTCA 59.376 43.478 0.00 0.00 0.00 3.27
3119 3270 4.274950 CGGCCCATTAATTTACGTTCTCAT 59.725 41.667 0.00 0.00 0.00 2.90
3120 3271 5.220970 CGGCCCATTAATTTACGTTCTCATT 60.221 40.000 0.00 0.00 0.00 2.57
3121 3272 6.569780 GGCCCATTAATTTACGTTCTCATTT 58.430 36.000 0.00 0.00 0.00 2.32
3122 3273 7.467539 CGGCCCATTAATTTACGTTCTCATTTA 60.468 37.037 0.00 0.00 0.00 1.40
3123 3274 7.860872 GGCCCATTAATTTACGTTCTCATTTAG 59.139 37.037 0.00 0.00 0.00 1.85
3124 3275 7.378728 GCCCATTAATTTACGTTCTCATTTAGC 59.621 37.037 0.00 0.00 0.00 3.09
3125 3276 7.586300 CCCATTAATTTACGTTCTCATTTAGCG 59.414 37.037 0.00 0.00 0.00 4.26
3126 3277 8.332464 CCATTAATTTACGTTCTCATTTAGCGA 58.668 33.333 0.00 0.00 0.00 4.93
3127 3278 9.144085 CATTAATTTACGTTCTCATTTAGCGAC 57.856 33.333 0.00 0.00 0.00 5.19
3128 3279 5.713822 ATTTACGTTCTCATTTAGCGACC 57.286 39.130 0.00 0.00 0.00 4.79
3129 3280 4.445452 TTACGTTCTCATTTAGCGACCT 57.555 40.909 0.00 0.00 0.00 3.85
3130 3281 2.607187 ACGTTCTCATTTAGCGACCTG 58.393 47.619 0.00 0.00 0.00 4.00
3131 3282 1.324736 CGTTCTCATTTAGCGACCTGC 59.675 52.381 0.00 0.00 46.98 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.083997 ATCGGCCTCCACTGTCCC 61.084 66.667 0.00 0.00 0.00 4.46
22 23 2.187946 CATCGGCCTCCACTGTCC 59.812 66.667 0.00 0.00 0.00 4.02
23 24 1.448540 CACATCGGCCTCCACTGTC 60.449 63.158 0.00 0.00 0.00 3.51
24 25 2.665000 CACATCGGCCTCCACTGT 59.335 61.111 0.00 0.00 0.00 3.55
25 26 2.124983 CCACATCGGCCTCCACTG 60.125 66.667 0.00 0.00 0.00 3.66
35 36 2.280389 CCAGATCCGGCCACATCG 60.280 66.667 2.24 0.14 0.00 3.84
36 37 1.097547 CAACCAGATCCGGCCACATC 61.098 60.000 2.24 2.75 0.00 3.06
37 38 1.077501 CAACCAGATCCGGCCACAT 60.078 57.895 2.24 0.00 0.00 3.21
38 39 2.350895 CAACCAGATCCGGCCACA 59.649 61.111 2.24 0.00 0.00 4.17
39 40 2.438434 CCAACCAGATCCGGCCAC 60.438 66.667 2.24 0.00 0.00 5.01
40 41 3.727258 CCCAACCAGATCCGGCCA 61.727 66.667 2.24 0.00 0.00 5.36
41 42 4.506255 CCCCAACCAGATCCGGCC 62.506 72.222 0.00 0.00 0.00 6.13
42 43 4.506255 CCCCCAACCAGATCCGGC 62.506 72.222 0.00 0.00 0.00 6.13
43 44 4.506255 GCCCCCAACCAGATCCGG 62.506 72.222 0.00 0.00 0.00 5.14
44 45 3.727258 TGCCCCCAACCAGATCCG 61.727 66.667 0.00 0.00 0.00 4.18
45 46 2.043953 GTGCCCCCAACCAGATCC 60.044 66.667 0.00 0.00 0.00 3.36
46 47 2.438434 CGTGCCCCCAACCAGATC 60.438 66.667 0.00 0.00 0.00 2.75
47 48 2.933287 TCGTGCCCCCAACCAGAT 60.933 61.111 0.00 0.00 0.00 2.90
48 49 3.948719 GTCGTGCCCCCAACCAGA 61.949 66.667 0.00 0.00 0.00 3.86
109 110 4.041917 ATTGCCGTTGCTGCACCG 62.042 61.111 12.88 12.88 38.72 4.94
110 111 2.431260 CATTGCCGTTGCTGCACC 60.431 61.111 0.00 0.00 38.72 5.01
111 112 2.431260 CCATTGCCGTTGCTGCAC 60.431 61.111 0.00 0.00 38.72 4.57
112 113 4.360964 GCCATTGCCGTTGCTGCA 62.361 61.111 0.00 0.00 38.71 4.41
114 115 4.781959 CCGCCATTGCCGTTGCTG 62.782 66.667 0.00 0.00 38.71 4.41
132 133 4.821589 CCCGAACGAGGCAGAGGC 62.822 72.222 0.00 0.00 40.13 4.70
133 134 4.148825 CCCCGAACGAGGCAGAGG 62.149 72.222 0.00 0.00 0.00 3.69
134 135 3.358076 GACCCCGAACGAGGCAGAG 62.358 68.421 0.00 0.00 0.00 3.35
135 136 3.379445 GACCCCGAACGAGGCAGA 61.379 66.667 0.00 0.00 0.00 4.26
136 137 3.649277 CTGACCCCGAACGAGGCAG 62.649 68.421 5.88 5.88 0.00 4.85
137 138 3.691342 CTGACCCCGAACGAGGCA 61.691 66.667 0.00 0.00 0.00 4.75
138 139 4.452733 CCTGACCCCGAACGAGGC 62.453 72.222 0.00 0.00 0.00 4.70
139 140 2.058595 ATCCTGACCCCGAACGAGG 61.059 63.158 0.00 0.00 0.00 4.63
140 141 1.141881 CATCCTGACCCCGAACGAG 59.858 63.158 0.00 0.00 0.00 4.18
141 142 2.355986 CCATCCTGACCCCGAACGA 61.356 63.158 0.00 0.00 0.00 3.85
142 143 2.186903 CCATCCTGACCCCGAACG 59.813 66.667 0.00 0.00 0.00 3.95
143 144 2.590092 CCCATCCTGACCCCGAAC 59.410 66.667 0.00 0.00 0.00 3.95
144 145 2.690881 CCCCATCCTGACCCCGAA 60.691 66.667 0.00 0.00 0.00 4.30
145 146 4.815973 CCCCCATCCTGACCCCGA 62.816 72.222 0.00 0.00 0.00 5.14
166 167 4.388499 CACCCGTCCCAACCTCGG 62.388 72.222 0.00 0.00 43.30 4.63
167 168 4.388499 CCACCCGTCCCAACCTCG 62.388 72.222 0.00 0.00 0.00 4.63
168 169 3.246880 ACCACCCGTCCCAACCTC 61.247 66.667 0.00 0.00 0.00 3.85
169 170 3.566210 CACCACCCGTCCCAACCT 61.566 66.667 0.00 0.00 0.00 3.50
170 171 3.837570 GACACCACCCGTCCCAACC 62.838 68.421 0.00 0.00 0.00 3.77
171 172 2.281276 GACACCACCCGTCCCAAC 60.281 66.667 0.00 0.00 0.00 3.77
172 173 2.446994 AGACACCACCCGTCCCAA 60.447 61.111 0.00 0.00 33.70 4.12
173 174 3.238497 CAGACACCACCCGTCCCA 61.238 66.667 0.00 0.00 33.70 4.37
174 175 4.016706 CCAGACACCACCCGTCCC 62.017 72.222 0.00 0.00 33.70 4.46
175 176 4.016706 CCCAGACACCACCCGTCC 62.017 72.222 0.00 0.00 33.70 4.79
176 177 4.016706 CCCCAGACACCACCCGTC 62.017 72.222 0.00 0.00 0.00 4.79
177 178 4.892291 ACCCCAGACACCACCCGT 62.892 66.667 0.00 0.00 0.00 5.28
178 179 4.016706 GACCCCAGACACCACCCG 62.017 72.222 0.00 0.00 0.00 5.28
179 180 4.016706 CGACCCCAGACACCACCC 62.017 72.222 0.00 0.00 0.00 4.61
180 181 4.016706 CCGACCCCAGACACCACC 62.017 72.222 0.00 0.00 0.00 4.61
181 182 4.016706 CCCGACCCCAGACACCAC 62.017 72.222 0.00 0.00 0.00 4.16
182 183 4.242586 TCCCGACCCCAGACACCA 62.243 66.667 0.00 0.00 0.00 4.17
183 184 3.391382 CTCCCGACCCCAGACACC 61.391 72.222 0.00 0.00 0.00 4.16
184 185 3.391382 CCTCCCGACCCCAGACAC 61.391 72.222 0.00 0.00 0.00 3.67
185 186 4.715130 CCCTCCCGACCCCAGACA 62.715 72.222 0.00 0.00 0.00 3.41
197 198 4.222847 GACCATCGTCGCCCCTCC 62.223 72.222 0.00 0.00 0.00 4.30
205 206 4.203076 CCGACCCCGACCATCGTC 62.203 72.222 0.00 0.00 38.40 4.20
208 209 2.842936 ATCCCGACCCCGACCATC 60.843 66.667 0.00 0.00 38.22 3.51
209 210 3.161450 CATCCCGACCCCGACCAT 61.161 66.667 0.00 0.00 38.22 3.55
219 220 4.750695 TTCCCAGGCCCATCCCGA 62.751 66.667 0.00 0.00 34.51 5.14
220 221 4.195334 CTTCCCAGGCCCATCCCG 62.195 72.222 0.00 0.00 34.51 5.14
221 222 4.529731 GCTTCCCAGGCCCATCCC 62.530 72.222 0.00 0.00 34.51 3.85
222 223 3.728292 CTGCTTCCCAGGCCCATCC 62.728 68.421 0.00 0.00 37.93 3.51
223 224 2.123982 CTGCTTCCCAGGCCCATC 60.124 66.667 0.00 0.00 37.93 3.51
230 231 0.987294 TTTCTCTCCCTGCTTCCCAG 59.013 55.000 0.00 0.00 41.41 4.45
231 232 1.673767 ATTTCTCTCCCTGCTTCCCA 58.326 50.000 0.00 0.00 0.00 4.37
232 233 2.757314 CAAATTTCTCTCCCTGCTTCCC 59.243 50.000 0.00 0.00 0.00 3.97
233 234 2.757314 CCAAATTTCTCTCCCTGCTTCC 59.243 50.000 0.00 0.00 0.00 3.46
234 235 2.757314 CCCAAATTTCTCTCCCTGCTTC 59.243 50.000 0.00 0.00 0.00 3.86
235 236 2.558350 CCCCAAATTTCTCTCCCTGCTT 60.558 50.000 0.00 0.00 0.00 3.91
236 237 1.006400 CCCCAAATTTCTCTCCCTGCT 59.994 52.381 0.00 0.00 0.00 4.24
237 238 1.478631 CCCCAAATTTCTCTCCCTGC 58.521 55.000 0.00 0.00 0.00 4.85
238 239 1.961919 GCCCCCAAATTTCTCTCCCTG 60.962 57.143 0.00 0.00 0.00 4.45
239 240 0.336392 GCCCCCAAATTTCTCTCCCT 59.664 55.000 0.00 0.00 0.00 4.20
240 241 0.336392 AGCCCCCAAATTTCTCTCCC 59.664 55.000 0.00 0.00 0.00 4.30
241 242 2.238084 AAGCCCCCAAATTTCTCTCC 57.762 50.000 0.00 0.00 0.00 3.71
242 243 4.569943 GAAAAAGCCCCCAAATTTCTCTC 58.430 43.478 0.00 0.00 0.00 3.20
243 244 3.006859 CGAAAAAGCCCCCAAATTTCTCT 59.993 43.478 0.00 0.00 0.00 3.10
244 245 3.325870 CGAAAAAGCCCCCAAATTTCTC 58.674 45.455 0.00 0.00 0.00 2.87
245 246 2.549992 GCGAAAAAGCCCCCAAATTTCT 60.550 45.455 0.00 0.00 0.00 2.52
246 247 1.804151 GCGAAAAAGCCCCCAAATTTC 59.196 47.619 0.00 0.00 0.00 2.17
247 248 1.141858 TGCGAAAAAGCCCCCAAATTT 59.858 42.857 0.00 0.00 36.02 1.82
248 249 0.761802 TGCGAAAAAGCCCCCAAATT 59.238 45.000 0.00 0.00 36.02 1.82
249 250 0.983467 ATGCGAAAAAGCCCCCAAAT 59.017 45.000 0.00 0.00 36.02 2.32
250 251 0.761802 AATGCGAAAAAGCCCCCAAA 59.238 45.000 0.00 0.00 36.02 3.28
251 252 1.633774 TAATGCGAAAAAGCCCCCAA 58.366 45.000 0.00 0.00 36.02 4.12
252 253 1.633774 TTAATGCGAAAAAGCCCCCA 58.366 45.000 0.00 0.00 36.02 4.96
253 254 2.343101 GTTTAATGCGAAAAAGCCCCC 58.657 47.619 0.00 0.00 36.02 5.40
254 255 2.028476 AGGTTTAATGCGAAAAAGCCCC 60.028 45.455 0.00 0.00 34.44 5.80
255 256 3.313012 AGGTTTAATGCGAAAAAGCCC 57.687 42.857 0.00 0.00 34.44 5.19
256 257 5.305139 TCTAGGTTTAATGCGAAAAAGCC 57.695 39.130 0.00 0.00 34.44 4.35
257 258 6.237569 GCAATCTAGGTTTAATGCGAAAAAGC 60.238 38.462 0.00 0.00 34.19 3.51
258 259 7.008628 CAGCAATCTAGGTTTAATGCGAAAAAG 59.991 37.037 0.00 0.00 38.74 2.27
259 260 6.806249 CAGCAATCTAGGTTTAATGCGAAAAA 59.194 34.615 0.00 0.00 38.74 1.94
260 261 6.072175 ACAGCAATCTAGGTTTAATGCGAAAA 60.072 34.615 0.00 0.00 38.74 2.29
261 262 5.414454 ACAGCAATCTAGGTTTAATGCGAAA 59.586 36.000 0.00 0.00 38.74 3.46
262 263 4.941263 ACAGCAATCTAGGTTTAATGCGAA 59.059 37.500 0.00 0.00 38.74 4.70
263 264 4.332543 CACAGCAATCTAGGTTTAATGCGA 59.667 41.667 0.00 0.00 38.74 5.10
264 265 4.591202 CACAGCAATCTAGGTTTAATGCG 58.409 43.478 0.00 0.00 38.74 4.73
265 266 4.354587 GCACAGCAATCTAGGTTTAATGC 58.645 43.478 0.00 0.00 0.00 3.56
266 267 4.398988 TGGCACAGCAATCTAGGTTTAATG 59.601 41.667 0.00 0.00 0.00 1.90
267 268 4.399303 GTGGCACAGCAATCTAGGTTTAAT 59.601 41.667 13.86 0.00 41.80 1.40
268 269 3.756434 GTGGCACAGCAATCTAGGTTTAA 59.244 43.478 13.86 0.00 41.80 1.52
269 270 3.343617 GTGGCACAGCAATCTAGGTTTA 58.656 45.455 13.86 0.00 41.80 2.01
270 271 2.162681 GTGGCACAGCAATCTAGGTTT 58.837 47.619 13.86 0.00 41.80 3.27
271 272 1.826385 GTGGCACAGCAATCTAGGTT 58.174 50.000 13.86 0.00 41.80 3.50
272 273 0.391661 CGTGGCACAGCAATCTAGGT 60.392 55.000 19.09 0.00 41.80 3.08
273 274 0.391661 ACGTGGCACAGCAATCTAGG 60.392 55.000 19.09 0.00 41.80 3.02
274 275 2.293677 TACGTGGCACAGCAATCTAG 57.706 50.000 19.09 0.00 41.80 2.43
275 276 2.616960 CTTACGTGGCACAGCAATCTA 58.383 47.619 19.09 0.00 41.80 1.98
276 277 1.442769 CTTACGTGGCACAGCAATCT 58.557 50.000 19.09 0.00 41.80 2.40
277 278 0.179189 GCTTACGTGGCACAGCAATC 60.179 55.000 19.91 3.00 41.80 2.67
278 279 0.888736 TGCTTACGTGGCACAGCAAT 60.889 50.000 23.79 4.91 41.80 3.56
279 280 1.506309 CTGCTTACGTGGCACAGCAA 61.506 55.000 25.24 12.35 41.65 3.91
280 281 1.960763 CTGCTTACGTGGCACAGCA 60.961 57.895 24.19 24.19 41.80 4.41
281 282 1.227999 TTCTGCTTACGTGGCACAGC 61.228 55.000 19.09 18.75 41.80 4.40
282 283 1.225855 TTTCTGCTTACGTGGCACAG 58.774 50.000 19.09 12.74 41.80 3.66
283 284 1.332375 GTTTTCTGCTTACGTGGCACA 59.668 47.619 19.09 0.00 35.71 4.57
284 285 1.659211 CGTTTTCTGCTTACGTGGCAC 60.659 52.381 7.79 7.79 35.71 5.01
285 286 0.584396 CGTTTTCTGCTTACGTGGCA 59.416 50.000 15.25 15.25 38.10 4.92
286 287 0.584876 ACGTTTTCTGCTTACGTGGC 59.415 50.000 0.00 3.00 45.67 5.01
287 288 2.156310 GGTACGTTTTCTGCTTACGTGG 59.844 50.000 9.47 0.00 46.66 4.94
288 289 2.156310 GGGTACGTTTTCTGCTTACGTG 59.844 50.000 9.47 0.00 46.66 4.49
290 291 1.728425 GGGGTACGTTTTCTGCTTACG 59.272 52.381 0.00 0.00 40.85 3.18
291 292 2.769893 TGGGGTACGTTTTCTGCTTAC 58.230 47.619 0.00 0.00 0.00 2.34
292 293 3.262405 AGATGGGGTACGTTTTCTGCTTA 59.738 43.478 0.00 0.00 0.00 3.09
293 294 2.039879 AGATGGGGTACGTTTTCTGCTT 59.960 45.455 0.00 0.00 0.00 3.91
294 295 1.628846 AGATGGGGTACGTTTTCTGCT 59.371 47.619 0.00 0.00 0.00 4.24
295 296 2.109425 AGATGGGGTACGTTTTCTGC 57.891 50.000 0.00 0.00 0.00 4.26
296 297 5.018539 TGATAGATGGGGTACGTTTTCTG 57.981 43.478 0.00 0.00 0.00 3.02
297 298 5.888982 ATGATAGATGGGGTACGTTTTCT 57.111 39.130 0.00 0.00 0.00 2.52
298 299 7.306983 CGTTTATGATAGATGGGGTACGTTTTC 60.307 40.741 0.00 0.00 0.00 2.29
299 300 6.480981 CGTTTATGATAGATGGGGTACGTTTT 59.519 38.462 0.00 0.00 0.00 2.43
300 301 5.987347 CGTTTATGATAGATGGGGTACGTTT 59.013 40.000 0.00 0.00 0.00 3.60
301 302 5.535333 CGTTTATGATAGATGGGGTACGTT 58.465 41.667 0.00 0.00 0.00 3.99
302 303 4.560108 GCGTTTATGATAGATGGGGTACGT 60.560 45.833 0.00 0.00 0.00 3.57
303 304 3.924686 GCGTTTATGATAGATGGGGTACG 59.075 47.826 0.00 0.00 0.00 3.67
304 305 4.689345 GTGCGTTTATGATAGATGGGGTAC 59.311 45.833 0.00 0.00 0.00 3.34
305 306 4.591498 AGTGCGTTTATGATAGATGGGGTA 59.409 41.667 0.00 0.00 0.00 3.69
306 307 3.391296 AGTGCGTTTATGATAGATGGGGT 59.609 43.478 0.00 0.00 0.00 4.95
307 308 4.008074 AGTGCGTTTATGATAGATGGGG 57.992 45.455 0.00 0.00 0.00 4.96
308 309 7.352739 GTTTAAGTGCGTTTATGATAGATGGG 58.647 38.462 0.00 0.00 0.00 4.00
309 310 7.042992 TCGTTTAAGTGCGTTTATGATAGATGG 60.043 37.037 0.00 0.00 0.00 3.51
310 311 7.837505 TCGTTTAAGTGCGTTTATGATAGATG 58.162 34.615 0.00 0.00 0.00 2.90
311 312 7.306632 GCTCGTTTAAGTGCGTTTATGATAGAT 60.307 37.037 0.00 0.00 0.00 1.98
312 313 6.020121 GCTCGTTTAAGTGCGTTTATGATAGA 60.020 38.462 0.00 0.00 0.00 1.98
313 314 6.120812 GCTCGTTTAAGTGCGTTTATGATAG 58.879 40.000 0.00 0.00 0.00 2.08
314 315 5.005971 GGCTCGTTTAAGTGCGTTTATGATA 59.994 40.000 0.00 0.00 0.00 2.15
315 316 4.201783 GGCTCGTTTAAGTGCGTTTATGAT 60.202 41.667 0.00 0.00 0.00 2.45
316 317 3.123959 GGCTCGTTTAAGTGCGTTTATGA 59.876 43.478 0.00 0.00 0.00 2.15
317 318 3.120477 TGGCTCGTTTAAGTGCGTTTATG 60.120 43.478 0.00 0.00 0.00 1.90
318 319 3.068560 TGGCTCGTTTAAGTGCGTTTAT 58.931 40.909 0.00 0.00 0.00 1.40
319 320 2.481854 TGGCTCGTTTAAGTGCGTTTA 58.518 42.857 0.00 0.00 0.00 2.01
320 321 1.301423 TGGCTCGTTTAAGTGCGTTT 58.699 45.000 0.00 0.00 0.00 3.60
321 322 1.301423 TTGGCTCGTTTAAGTGCGTT 58.699 45.000 0.00 0.00 0.00 4.84
322 323 1.301423 TTTGGCTCGTTTAAGTGCGT 58.699 45.000 0.00 0.00 0.00 5.24
323 324 2.505866 GATTTGGCTCGTTTAAGTGCG 58.494 47.619 0.00 0.00 0.00 5.34
324 325 2.727916 CGGATTTGGCTCGTTTAAGTGC 60.728 50.000 0.00 0.00 0.00 4.40
325 326 2.727916 GCGGATTTGGCTCGTTTAAGTG 60.728 50.000 0.00 0.00 0.00 3.16
326 327 1.467342 GCGGATTTGGCTCGTTTAAGT 59.533 47.619 0.00 0.00 0.00 2.24
327 328 1.202143 GGCGGATTTGGCTCGTTTAAG 60.202 52.381 0.00 0.00 0.00 1.85
328 329 0.806241 GGCGGATTTGGCTCGTTTAA 59.194 50.000 0.00 0.00 0.00 1.52
329 330 1.363145 CGGCGGATTTGGCTCGTTTA 61.363 55.000 0.00 0.00 0.00 2.01
330 331 2.686816 CGGCGGATTTGGCTCGTTT 61.687 57.895 0.00 0.00 0.00 3.60
331 332 2.869503 ATCGGCGGATTTGGCTCGTT 62.870 55.000 7.21 0.00 0.00 3.85
332 333 3.385749 ATCGGCGGATTTGGCTCGT 62.386 57.895 7.21 0.00 0.00 4.18
333 334 2.588877 ATCGGCGGATTTGGCTCG 60.589 61.111 7.21 0.00 0.00 5.03
334 335 0.886490 ATGATCGGCGGATTTGGCTC 60.886 55.000 7.21 0.00 31.51 4.70
335 336 0.466189 AATGATCGGCGGATTTGGCT 60.466 50.000 7.21 0.00 31.51 4.75
336 337 0.318107 CAATGATCGGCGGATTTGGC 60.318 55.000 7.21 0.00 31.51 4.52
337 338 1.024271 ACAATGATCGGCGGATTTGG 58.976 50.000 17.81 7.11 31.51 3.28
338 339 2.611751 TGTACAATGATCGGCGGATTTG 59.388 45.455 7.21 11.73 31.51 2.32
339 340 2.612212 GTGTACAATGATCGGCGGATTT 59.388 45.455 7.21 0.00 31.51 2.17
340 341 2.210116 GTGTACAATGATCGGCGGATT 58.790 47.619 7.21 0.08 31.51 3.01
341 342 1.138069 TGTGTACAATGATCGGCGGAT 59.862 47.619 7.21 6.45 34.96 4.18
342 343 0.533032 TGTGTACAATGATCGGCGGA 59.467 50.000 7.21 0.00 0.00 5.54
343 344 1.327460 CTTGTGTACAATGATCGGCGG 59.673 52.381 7.21 0.00 35.02 6.13
344 345 2.267426 TCTTGTGTACAATGATCGGCG 58.733 47.619 0.00 0.00 35.02 6.46
345 346 3.623060 ACATCTTGTGTACAATGATCGGC 59.377 43.478 11.34 0.00 39.91 5.54
346 347 4.034394 CCACATCTTGTGTACAATGATCGG 59.966 45.833 11.34 7.87 46.45 4.18
347 348 4.631377 ACCACATCTTGTGTACAATGATCG 59.369 41.667 11.34 6.92 46.45 3.69
348 349 5.412594 ACACCACATCTTGTGTACAATGATC 59.587 40.000 11.34 0.00 46.45 2.92
349 350 5.316167 ACACCACATCTTGTGTACAATGAT 58.684 37.500 11.34 6.50 46.45 2.45
350 351 4.713553 ACACCACATCTTGTGTACAATGA 58.286 39.130 11.34 4.58 46.45 2.57
351 352 5.437289 AACACCACATCTTGTGTACAATG 57.563 39.130 0.00 0.00 46.45 2.82
352 353 6.321181 AGAAAACACCACATCTTGTGTACAAT 59.679 34.615 0.00 0.00 46.45 2.71
353 354 5.650266 AGAAAACACCACATCTTGTGTACAA 59.350 36.000 0.00 0.00 46.45 2.41
354 355 5.065859 CAGAAAACACCACATCTTGTGTACA 59.934 40.000 6.86 0.00 46.45 2.90
355 356 5.510671 CAGAAAACACCACATCTTGTGTAC 58.489 41.667 6.86 0.00 46.45 2.90
356 357 4.036262 GCAGAAAACACCACATCTTGTGTA 59.964 41.667 6.86 0.00 46.45 2.90
357 358 3.181487 GCAGAAAACACCACATCTTGTGT 60.181 43.478 6.86 0.00 46.45 3.72
359 360 3.023119 TGCAGAAAACACCACATCTTGT 58.977 40.909 0.00 0.00 0.00 3.16
360 361 3.316029 TCTGCAGAAAACACCACATCTTG 59.684 43.478 15.67 0.00 0.00 3.02
361 362 3.554934 TCTGCAGAAAACACCACATCTT 58.445 40.909 15.67 0.00 0.00 2.40
362 363 3.144506 CTCTGCAGAAAACACCACATCT 58.855 45.455 18.85 0.00 0.00 2.90
363 364 3.141398 TCTCTGCAGAAAACACCACATC 58.859 45.455 18.85 0.00 0.00 3.06
364 365 3.213206 TCTCTGCAGAAAACACCACAT 57.787 42.857 18.85 0.00 0.00 3.21
365 366 2.708216 TCTCTGCAGAAAACACCACA 57.292 45.000 18.85 0.00 0.00 4.17
369 370 8.645498 AGGATACAGTTTCTCTGCAGAAAACAC 61.645 40.741 32.34 22.06 44.59 3.32
370 371 6.688922 AGGATACAGTTTCTCTGCAGAAAACA 60.689 38.462 32.34 22.48 44.59 2.83
371 372 5.703130 AGGATACAGTTTCTCTGCAGAAAAC 59.297 40.000 28.36 28.36 44.59 2.43
372 373 5.869579 AGGATACAGTTTCTCTGCAGAAAA 58.130 37.500 18.85 16.82 44.59 2.29
380 381 6.954352 AAAACCCTAGGATACAGTTTCTCT 57.046 37.500 11.48 0.00 41.41 3.10
381 382 6.313164 CGAAAAACCCTAGGATACAGTTTCTC 59.687 42.308 11.48 7.06 41.41 2.87
382 383 6.171213 CGAAAAACCCTAGGATACAGTTTCT 58.829 40.000 11.48 0.00 41.41 2.52
383 384 5.163784 GCGAAAAACCCTAGGATACAGTTTC 60.164 44.000 11.48 9.69 41.41 2.78
384 385 4.698780 GCGAAAAACCCTAGGATACAGTTT 59.301 41.667 11.48 8.79 41.41 2.66
385 386 4.259356 GCGAAAAACCCTAGGATACAGTT 58.741 43.478 11.48 2.04 41.41 3.16
386 387 3.262405 TGCGAAAAACCCTAGGATACAGT 59.738 43.478 11.48 0.00 41.41 3.55
387 388 3.869065 TGCGAAAAACCCTAGGATACAG 58.131 45.455 11.48 0.00 41.41 2.74
388 389 3.985019 TGCGAAAAACCCTAGGATACA 57.015 42.857 11.48 0.00 41.41 2.29
389 390 4.698780 AGTTTGCGAAAAACCCTAGGATAC 59.301 41.667 11.48 0.00 0.00 2.24
390 391 4.913784 AGTTTGCGAAAAACCCTAGGATA 58.086 39.130 11.48 0.00 0.00 2.59
391 392 3.763057 AGTTTGCGAAAAACCCTAGGAT 58.237 40.909 11.48 0.00 0.00 3.24
392 393 3.217681 AGTTTGCGAAAAACCCTAGGA 57.782 42.857 11.48 0.00 0.00 2.94
393 394 4.615223 GCTAAGTTTGCGAAAAACCCTAGG 60.615 45.833 0.06 0.06 0.00 3.02
394 395 4.473199 GCTAAGTTTGCGAAAAACCCTAG 58.527 43.478 9.70 11.12 0.00 3.02
395 396 3.253921 GGCTAAGTTTGCGAAAAACCCTA 59.746 43.478 9.70 3.31 0.00 3.53
396 397 2.035449 GGCTAAGTTTGCGAAAAACCCT 59.965 45.455 9.70 2.48 0.00 4.34
397 398 2.400399 GGCTAAGTTTGCGAAAAACCC 58.600 47.619 9.70 2.37 0.00 4.11
398 399 2.035449 AGGGCTAAGTTTGCGAAAAACC 59.965 45.455 9.70 0.00 0.00 3.27
399 400 3.243267 TGAGGGCTAAGTTTGCGAAAAAC 60.243 43.478 3.21 0.00 0.00 2.43
400 401 2.952978 TGAGGGCTAAGTTTGCGAAAAA 59.047 40.909 3.21 0.00 0.00 1.94
401 402 2.577700 TGAGGGCTAAGTTTGCGAAAA 58.422 42.857 3.21 0.00 0.00 2.29
402 403 2.264005 TGAGGGCTAAGTTTGCGAAA 57.736 45.000 3.21 0.00 0.00 3.46
403 404 2.264005 TTGAGGGCTAAGTTTGCGAA 57.736 45.000 3.21 0.00 0.00 4.70
404 405 2.264005 TTTGAGGGCTAAGTTTGCGA 57.736 45.000 3.21 0.00 0.00 5.10
405 406 3.057596 TCATTTTGAGGGCTAAGTTTGCG 60.058 43.478 3.21 0.00 0.00 4.85
406 407 4.519540 TCATTTTGAGGGCTAAGTTTGC 57.480 40.909 0.18 0.18 0.00 3.68
407 408 5.413499 CCATCATTTTGAGGGCTAAGTTTG 58.587 41.667 0.00 0.00 41.71 2.93
408 409 5.665916 CCATCATTTTGAGGGCTAAGTTT 57.334 39.130 0.00 0.00 41.71 2.66
417 418 7.852971 ATTGCATAAAACCATCATTTTGAGG 57.147 32.000 0.00 0.00 33.80 3.86
422 423 9.382275 GGAGTAAATTGCATAAAACCATCATTT 57.618 29.630 0.00 0.00 0.00 2.32
423 424 7.706179 CGGAGTAAATTGCATAAAACCATCATT 59.294 33.333 0.00 0.00 0.00 2.57
424 425 7.147915 ACGGAGTAAATTGCATAAAACCATCAT 60.148 33.333 0.00 0.00 41.94 2.45
425 426 6.151985 ACGGAGTAAATTGCATAAAACCATCA 59.848 34.615 0.00 0.00 41.94 3.07
426 427 6.560711 ACGGAGTAAATTGCATAAAACCATC 58.439 36.000 0.00 0.00 41.94 3.51
427 428 6.524101 ACGGAGTAAATTGCATAAAACCAT 57.476 33.333 0.00 0.00 41.94 3.55
428 429 5.968528 ACGGAGTAAATTGCATAAAACCA 57.031 34.783 0.00 0.00 41.94 3.67
429 430 7.274033 GGTTAACGGAGTAAATTGCATAAAACC 59.726 37.037 0.00 0.00 45.00 3.27
430 431 7.808856 TGGTTAACGGAGTAAATTGCATAAAAC 59.191 33.333 0.00 0.00 45.00 2.43
431 432 7.883217 TGGTTAACGGAGTAAATTGCATAAAA 58.117 30.769 0.00 0.00 45.00 1.52
432 433 7.450124 TGGTTAACGGAGTAAATTGCATAAA 57.550 32.000 0.00 0.00 45.00 1.40
433 434 7.476667 CATGGTTAACGGAGTAAATTGCATAA 58.523 34.615 0.00 0.00 45.00 1.90
434 435 6.459024 GCATGGTTAACGGAGTAAATTGCATA 60.459 38.462 0.00 0.00 45.00 3.14
435 436 5.678616 GCATGGTTAACGGAGTAAATTGCAT 60.679 40.000 0.00 0.00 45.00 3.96
436 437 4.380023 GCATGGTTAACGGAGTAAATTGCA 60.380 41.667 0.00 0.00 45.00 4.08
437 438 4.102649 GCATGGTTAACGGAGTAAATTGC 58.897 43.478 0.00 0.00 45.00 3.56
438 439 5.303747 TGCATGGTTAACGGAGTAAATTG 57.696 39.130 0.00 0.00 45.00 2.32
439 440 5.678616 GCATGCATGGTTAACGGAGTAAATT 60.679 40.000 27.34 0.00 45.00 1.82
440 441 4.202010 GCATGCATGGTTAACGGAGTAAAT 60.202 41.667 27.34 0.00 45.00 1.40
441 442 3.127895 GCATGCATGGTTAACGGAGTAAA 59.872 43.478 27.34 0.00 45.00 2.01
442 443 2.680841 GCATGCATGGTTAACGGAGTAA 59.319 45.455 27.34 0.00 45.00 2.24
443 444 2.285083 GCATGCATGGTTAACGGAGTA 58.715 47.619 27.34 0.00 45.00 2.59
445 446 0.381801 GGCATGCATGGTTAACGGAG 59.618 55.000 27.34 0.00 0.00 4.63
446 447 0.034574 AGGCATGCATGGTTAACGGA 60.035 50.000 27.34 0.00 0.00 4.69
447 448 0.101040 CAGGCATGCATGGTTAACGG 59.899 55.000 27.34 0.11 0.00 4.44
448 449 3.628005 CAGGCATGCATGGTTAACG 57.372 52.632 27.34 0.91 0.00 3.18
478 481 5.067413 CGGCTAGGACTGACTAATCACTAAA 59.933 44.000 0.00 0.00 0.00 1.85
506 510 6.880942 ATCATTTGGGAAAACAAAACATGG 57.119 33.333 0.00 0.00 42.91 3.66
613 628 3.641437 TTTTCGGATGGCAAGTTTCAG 57.359 42.857 0.00 0.00 0.00 3.02
657 672 2.610374 GTGACGCAAGGTTGACAAGTTA 59.390 45.455 0.00 0.00 46.39 2.24
660 675 1.299541 AGTGACGCAAGGTTGACAAG 58.700 50.000 0.00 0.00 46.39 3.16
667 682 1.602377 GCAAGTTTAGTGACGCAAGGT 59.398 47.619 0.00 0.00 46.39 3.50
693 708 2.878406 CACATGACAACTCCGACCTTTT 59.122 45.455 0.00 0.00 0.00 2.27
697 712 1.798813 GAACACATGACAACTCCGACC 59.201 52.381 0.00 0.00 0.00 4.79
699 714 1.067974 ACGAACACATGACAACTCCGA 59.932 47.619 0.00 0.00 0.00 4.55
700 715 1.192312 CACGAACACATGACAACTCCG 59.808 52.381 0.00 0.00 0.00 4.63
701 716 1.069906 GCACGAACACATGACAACTCC 60.070 52.381 0.00 0.00 0.00 3.85
704 719 0.660488 TGGCACGAACACATGACAAC 59.340 50.000 0.00 0.00 28.30 3.32
708 724 0.943835 CGAGTGGCACGAACACATGA 60.944 55.000 12.71 0.00 41.21 3.07
725 741 2.230508 GACCCTGATAAGTGTCACACGA 59.769 50.000 1.22 0.00 39.64 4.35
732 748 6.388619 AATACAAAGGACCCTGATAAGTGT 57.611 37.500 0.00 0.00 0.00 3.55
757 778 7.678947 AACGAGTTCAATCTTCATGAGAATT 57.321 32.000 0.00 0.00 38.06 2.17
847 872 8.816640 ATTGAATTGTGTGTTCTAAAATCCAC 57.183 30.769 0.00 0.00 0.00 4.02
948 973 6.014925 TGTGCTGGTAATTAGTTAGTCAGTGA 60.015 38.462 0.00 0.00 30.84 3.41
1019 1134 3.082579 GCCGAAGCCAGGACGAGAT 62.083 63.158 0.00 0.00 0.00 2.75
1067 1182 1.152546 GGAGAGAGAGGAGGGAGGC 60.153 68.421 0.00 0.00 0.00 4.70
1152 1270 1.209019 GAGGAGGAGATCAGCAAGCAA 59.791 52.381 0.00 0.00 0.00 3.91
1201 1324 1.617018 TAGGCCAACATGCTCTCGCT 61.617 55.000 5.01 0.00 36.97 4.93
1561 1684 0.762082 TTGCCAACCATGCCTTCCAA 60.762 50.000 0.00 0.00 0.00 3.53
1795 1921 1.097547 CCGCAGATTTCGCCCAATCT 61.098 55.000 0.07 0.07 43.14 2.40
1797 1923 2.120909 CCCGCAGATTTCGCCCAAT 61.121 57.895 0.00 0.00 0.00 3.16
1884 2010 0.946221 CGCTGAAGTTGAACTCGCCT 60.946 55.000 0.00 0.00 0.00 5.52
2097 2226 1.981312 TGCGGAGAGAGCAGCTTCT 60.981 57.895 0.00 1.28 40.01 2.85
2161 2290 1.877576 ATCACGAGAACAGCGGCAGA 61.878 55.000 1.45 0.00 0.00 4.26
2188 2317 4.979335 AGGGAGAGGAAAAGAAAAGACAG 58.021 43.478 0.00 0.00 0.00 3.51
2379 2520 1.848652 TGGTCGTCCTAGGAAGAAGG 58.151 55.000 26.38 8.53 34.71 3.46
2624 2775 1.382522 CGTGCAGGCATGGTAAATCT 58.617 50.000 0.00 0.00 0.00 2.40
2772 2923 1.584483 CGCAATCACGCTGCCAATC 60.584 57.895 0.00 0.00 36.40 2.67
2811 2962 4.429108 TGCAAGTTGTTACTCCTTTTTGC 58.571 39.130 4.48 0.00 33.38 3.68
2813 2964 6.321181 TCTGATGCAAGTTGTTACTCCTTTTT 59.679 34.615 4.48 0.00 31.99 1.94
2818 2969 4.154918 CCTTCTGATGCAAGTTGTTACTCC 59.845 45.833 4.48 0.00 31.99 3.85
2837 2988 3.829026 AGCTGGTTTTCTGATTTCCCTTC 59.171 43.478 0.00 0.00 0.00 3.46
2848 2999 0.825010 CAGGGTGCAGCTGGTTTTCT 60.825 55.000 17.12 0.00 0.00 2.52
2850 3001 2.501602 GCAGGGTGCAGCTGGTTTT 61.502 57.895 17.12 0.00 44.26 2.43
2873 3024 1.062148 GTGAAATTCTACGGAAGGCGC 59.938 52.381 0.00 0.00 34.70 6.53
2896 3047 6.901887 CCATCTTTATCACTCGAACGATTTTG 59.098 38.462 1.89 0.00 0.00 2.44
2918 3069 1.971357 ACTCCACAGTCTCGTTTCCAT 59.029 47.619 0.00 0.00 0.00 3.41
2919 3070 1.068588 CACTCCACAGTCTCGTTTCCA 59.931 52.381 0.00 0.00 0.00 3.53
2920 3071 1.605712 CCACTCCACAGTCTCGTTTCC 60.606 57.143 0.00 0.00 0.00 3.13
2921 3072 1.068741 ACCACTCCACAGTCTCGTTTC 59.931 52.381 0.00 0.00 0.00 2.78
2928 3079 4.683432 GAGCACCACTCCACAGTC 57.317 61.111 0.00 0.00 39.75 3.51
2996 3147 3.058432 GCCCCTTTACTTCGTTTTCAGAC 60.058 47.826 0.00 0.00 0.00 3.51
2997 3148 3.143728 GCCCCTTTACTTCGTTTTCAGA 58.856 45.455 0.00 0.00 0.00 3.27
2998 3149 2.882137 TGCCCCTTTACTTCGTTTTCAG 59.118 45.455 0.00 0.00 0.00 3.02
2999 3150 2.933573 TGCCCCTTTACTTCGTTTTCA 58.066 42.857 0.00 0.00 0.00 2.69
3000 3151 3.994204 TTGCCCCTTTACTTCGTTTTC 57.006 42.857 0.00 0.00 0.00 2.29
3001 3152 4.262292 GGATTTGCCCCTTTACTTCGTTTT 60.262 41.667 0.00 0.00 0.00 2.43
3002 3153 3.257375 GGATTTGCCCCTTTACTTCGTTT 59.743 43.478 0.00 0.00 0.00 3.60
3003 3154 2.823747 GGATTTGCCCCTTTACTTCGTT 59.176 45.455 0.00 0.00 0.00 3.85
3004 3155 2.041216 AGGATTTGCCCCTTTACTTCGT 59.959 45.455 0.00 0.00 37.37 3.85
3005 3156 2.723273 AGGATTTGCCCCTTTACTTCG 58.277 47.619 0.00 0.00 37.37 3.79
3006 3157 6.406961 CCAAATAGGATTTGCCCCTTTACTTC 60.407 42.308 6.43 0.00 41.22 3.01
3007 3158 5.425217 CCAAATAGGATTTGCCCCTTTACTT 59.575 40.000 6.43 0.00 41.22 2.24
3008 3159 4.962362 CCAAATAGGATTTGCCCCTTTACT 59.038 41.667 6.43 0.00 41.22 2.24
3009 3160 4.442893 GCCAAATAGGATTTGCCCCTTTAC 60.443 45.833 6.43 0.00 41.22 2.01
3010 3161 3.709141 GCCAAATAGGATTTGCCCCTTTA 59.291 43.478 6.43 0.00 41.22 1.85
3011 3162 2.505407 GCCAAATAGGATTTGCCCCTTT 59.495 45.455 6.43 0.00 41.22 3.11
3012 3163 2.118679 GCCAAATAGGATTTGCCCCTT 58.881 47.619 6.43 0.00 41.22 3.95
3013 3164 1.793414 GCCAAATAGGATTTGCCCCT 58.207 50.000 6.43 0.00 41.22 4.79
3014 3165 0.389025 CGCCAAATAGGATTTGCCCC 59.611 55.000 6.43 0.00 41.22 5.80
3015 3166 0.249447 GCGCCAAATAGGATTTGCCC 60.249 55.000 0.00 0.38 41.22 5.36
3016 3167 0.746659 AGCGCCAAATAGGATTTGCC 59.253 50.000 2.29 0.00 41.22 4.52
3017 3168 1.536709 CCAGCGCCAAATAGGATTTGC 60.537 52.381 2.29 2.59 41.22 3.68
3018 3169 1.750778 ACCAGCGCCAAATAGGATTTG 59.249 47.619 2.29 5.17 41.22 2.32
3019 3170 2.143876 ACCAGCGCCAAATAGGATTT 57.856 45.000 2.29 0.00 41.22 2.17
3020 3171 2.143876 AACCAGCGCCAAATAGGATT 57.856 45.000 2.29 0.00 41.22 3.01
3021 3172 2.949644 GTTAACCAGCGCCAAATAGGAT 59.050 45.455 2.29 0.00 41.22 3.24
3022 3173 2.361789 GTTAACCAGCGCCAAATAGGA 58.638 47.619 2.29 0.00 41.22 2.94
3023 3174 1.063469 CGTTAACCAGCGCCAAATAGG 59.937 52.381 2.29 0.00 41.84 2.57
3024 3175 1.735571 ACGTTAACCAGCGCCAAATAG 59.264 47.619 2.29 0.00 0.00 1.73
3025 3176 1.465387 CACGTTAACCAGCGCCAAATA 59.535 47.619 2.29 0.00 0.00 1.40
3026 3177 0.239879 CACGTTAACCAGCGCCAAAT 59.760 50.000 2.29 0.00 0.00 2.32
3027 3178 1.649815 CACGTTAACCAGCGCCAAA 59.350 52.632 2.29 0.00 0.00 3.28
3028 3179 2.899044 GCACGTTAACCAGCGCCAA 61.899 57.895 2.29 0.00 0.00 4.52
3029 3180 3.350612 GCACGTTAACCAGCGCCA 61.351 61.111 2.29 0.00 0.00 5.69
3030 3181 2.195123 AATGCACGTTAACCAGCGCC 62.195 55.000 2.29 0.00 0.00 6.53
3031 3182 0.386731 AAATGCACGTTAACCAGCGC 60.387 50.000 0.00 0.00 0.00 5.92
3032 3183 1.326576 CAAATGCACGTTAACCAGCG 58.673 50.000 11.04 0.00 0.00 5.18
3033 3184 1.000717 ACCAAATGCACGTTAACCAGC 60.001 47.619 9.35 9.35 0.00 4.85
3034 3185 3.363341 AACCAAATGCACGTTAACCAG 57.637 42.857 0.00 0.00 0.00 4.00
3035 3186 4.608951 GTTAACCAAATGCACGTTAACCA 58.391 39.130 19.85 0.00 42.84 3.67
3036 3187 3.664947 CGTTAACCAAATGCACGTTAACC 59.335 43.478 22.23 12.55 44.47 2.85
3037 3188 3.664947 CCGTTAACCAAATGCACGTTAAC 59.335 43.478 20.24 20.24 44.14 2.01
3038 3189 3.304525 CCCGTTAACCAAATGCACGTTAA 60.305 43.478 0.00 0.00 31.33 2.01
3039 3190 2.225963 CCCGTTAACCAAATGCACGTTA 59.774 45.455 0.00 0.00 0.00 3.18
3040 3191 1.001158 CCCGTTAACCAAATGCACGTT 60.001 47.619 0.00 0.00 0.00 3.99
3041 3192 0.594110 CCCGTTAACCAAATGCACGT 59.406 50.000 0.00 0.00 0.00 4.49
3042 3193 0.731174 GCCCGTTAACCAAATGCACG 60.731 55.000 0.00 0.00 0.00 5.34
3043 3194 0.315568 TGCCCGTTAACCAAATGCAC 59.684 50.000 0.00 0.00 0.00 4.57
3044 3195 0.315568 GTGCCCGTTAACCAAATGCA 59.684 50.000 0.00 0.00 0.00 3.96
3045 3196 0.389296 GGTGCCCGTTAACCAAATGC 60.389 55.000 0.00 0.00 36.41 3.56
3046 3197 1.067915 CAGGTGCCCGTTAACCAAATG 60.068 52.381 0.00 0.00 39.05 2.32
3047 3198 1.253100 CAGGTGCCCGTTAACCAAAT 58.747 50.000 0.00 0.00 39.05 2.32
3048 3199 1.457009 GCAGGTGCCCGTTAACCAAA 61.457 55.000 0.00 0.00 39.05 3.28
3049 3200 1.899534 GCAGGTGCCCGTTAACCAA 60.900 57.895 0.00 0.00 39.05 3.67
3050 3201 2.281900 GCAGGTGCCCGTTAACCA 60.282 61.111 0.00 0.00 39.05 3.67
3051 3202 2.281900 TGCAGGTGCCCGTTAACC 60.282 61.111 0.00 0.00 41.18 2.85
3052 3203 2.978018 GCTGCAGGTGCCCGTTAAC 61.978 63.158 17.12 0.00 41.18 2.01
3053 3204 2.671619 GCTGCAGGTGCCCGTTAA 60.672 61.111 17.12 0.00 41.18 2.01
3066 3217 3.423154 GTAGGTGGTGCACGCTGC 61.423 66.667 11.45 0.00 45.29 5.25
3067 3218 2.742372 GGTAGGTGGTGCACGCTG 60.742 66.667 11.45 0.00 34.83 5.18
3068 3219 4.373116 CGGTAGGTGGTGCACGCT 62.373 66.667 11.45 0.00 34.83 5.07
3071 3222 4.367023 TCGCGGTAGGTGGTGCAC 62.367 66.667 8.80 8.80 0.00 4.57
3072 3223 4.367023 GTCGCGGTAGGTGGTGCA 62.367 66.667 6.13 0.00 0.00 4.57
3074 3225 3.379445 AGGTCGCGGTAGGTGGTG 61.379 66.667 6.13 0.00 0.00 4.17
3075 3226 3.379445 CAGGTCGCGGTAGGTGGT 61.379 66.667 6.13 0.00 0.00 4.16
3076 3227 4.143333 CCAGGTCGCGGTAGGTGG 62.143 72.222 6.13 2.70 0.00 4.61
3077 3228 3.066190 TCCAGGTCGCGGTAGGTG 61.066 66.667 6.13 0.00 0.00 4.00
3078 3229 3.066814 GTCCAGGTCGCGGTAGGT 61.067 66.667 6.13 0.00 0.00 3.08
3079 3230 3.834799 GGTCCAGGTCGCGGTAGG 61.835 72.222 6.13 3.66 0.00 3.18
3080 3231 4.189188 CGGTCCAGGTCGCGGTAG 62.189 72.222 6.13 0.00 0.00 3.18
3087 3238 1.917336 TTAATGGGCCGGTCCAGGTC 61.917 60.000 34.47 2.47 40.56 3.85
3088 3239 1.286305 ATTAATGGGCCGGTCCAGGT 61.286 55.000 34.47 25.27 40.56 4.00
3089 3240 0.106217 AATTAATGGGCCGGTCCAGG 60.106 55.000 34.47 0.00 40.56 4.45
3090 3241 1.775385 AAATTAATGGGCCGGTCCAG 58.225 50.000 34.47 0.00 40.56 3.86
3091 3242 2.657143 GTAAATTAATGGGCCGGTCCA 58.343 47.619 33.79 33.79 41.60 4.02
3092 3243 1.605232 CGTAAATTAATGGGCCGGTCC 59.395 52.381 21.35 21.35 0.00 4.46
3093 3244 2.291365 ACGTAAATTAATGGGCCGGTC 58.709 47.619 1.90 0.00 0.00 4.79
3094 3245 2.423446 ACGTAAATTAATGGGCCGGT 57.577 45.000 1.90 0.00 0.00 5.28
3095 3246 2.946990 AGAACGTAAATTAATGGGCCGG 59.053 45.455 0.00 0.00 0.00 6.13
3096 3247 3.623960 TGAGAACGTAAATTAATGGGCCG 59.376 43.478 0.00 0.00 0.00 6.13
3097 3248 5.767816 ATGAGAACGTAAATTAATGGGCC 57.232 39.130 0.00 0.00 0.00 5.80
3098 3249 7.378728 GCTAAATGAGAACGTAAATTAATGGGC 59.621 37.037 0.00 0.00 0.00 5.36
3099 3250 7.586300 CGCTAAATGAGAACGTAAATTAATGGG 59.414 37.037 0.00 0.00 0.00 4.00
3100 3251 8.332464 TCGCTAAATGAGAACGTAAATTAATGG 58.668 33.333 0.00 0.00 0.00 3.16
3101 3252 9.144085 GTCGCTAAATGAGAACGTAAATTAATG 57.856 33.333 0.00 0.00 0.00 1.90
3102 3253 8.333186 GGTCGCTAAATGAGAACGTAAATTAAT 58.667 33.333 0.00 0.00 0.00 1.40
3103 3254 7.546667 AGGTCGCTAAATGAGAACGTAAATTAA 59.453 33.333 0.00 0.00 37.27 1.40
3104 3255 7.009815 CAGGTCGCTAAATGAGAACGTAAATTA 59.990 37.037 0.00 0.00 37.27 1.40
3105 3256 5.873164 AGGTCGCTAAATGAGAACGTAAATT 59.127 36.000 0.00 0.00 37.27 1.82
3106 3257 5.291128 CAGGTCGCTAAATGAGAACGTAAAT 59.709 40.000 0.00 0.00 37.27 1.40
3107 3258 4.624024 CAGGTCGCTAAATGAGAACGTAAA 59.376 41.667 0.00 0.00 37.27 2.01
3108 3259 4.171005 CAGGTCGCTAAATGAGAACGTAA 58.829 43.478 0.00 0.00 37.27 3.18
3109 3260 3.766151 CAGGTCGCTAAATGAGAACGTA 58.234 45.455 0.00 0.00 37.27 3.57
3110 3261 2.607187 CAGGTCGCTAAATGAGAACGT 58.393 47.619 0.00 0.00 37.27 3.99
3111 3262 1.324736 GCAGGTCGCTAAATGAGAACG 59.675 52.381 0.00 0.00 37.27 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.