Multiple sequence alignment - TraesCS1D01G274200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G274200 chr1D 100.000 6425 0 0 1 6425 369904965 369898541 0.000000e+00 11865.0
1 TraesCS1D01G274200 chr1D 92.866 2341 121 13 2712 5034 481927285 481924973 0.000000e+00 3356.0
2 TraesCS1D01G274200 chr1D 84.782 2359 177 94 425 2711 368323108 368320860 0.000000e+00 2200.0
3 TraesCS1D01G274200 chr1D 91.247 754 50 6 4284 5037 467502753 467502016 0.000000e+00 1013.0
4 TraesCS1D01G274200 chr1D 93.236 547 35 2 5035 5581 368320862 368320318 0.000000e+00 804.0
5 TraesCS1D01G274200 chr1D 92.537 268 13 4 160 422 368323412 368323147 1.690000e-100 377.0
6 TraesCS1D01G274200 chr1D 91.453 234 19 1 66 298 368332775 368332542 2.890000e-83 320.0
7 TraesCS1D01G274200 chr6D 95.371 2333 82 8 2709 5035 446602926 446605238 0.000000e+00 3687.0
8 TraesCS1D01G274200 chr6D 76.347 427 94 7 5751 6174 149236744 149237166 8.380000e-54 222.0
9 TraesCS1D01G274200 chr6D 94.737 57 3 0 1548 1604 468860022 468859966 8.870000e-14 89.8
10 TraesCS1D01G274200 chr6D 91.525 59 2 3 2236 2293 140998103 140998159 1.920000e-10 78.7
11 TraesCS1D01G274200 chr6D 94.118 51 3 0 6221 6271 196752504 196752454 1.920000e-10 78.7
12 TraesCS1D01G274200 chr4B 93.966 2287 91 11 2712 4981 529673698 529675954 0.000000e+00 3415.0
13 TraesCS1D01G274200 chr4B 83.784 518 81 3 5754 6271 323462430 323461916 7.490000e-134 488.0
14 TraesCS1D01G274200 chr4B 82.667 525 87 2 5755 6277 283885639 283886161 4.540000e-126 462.0
15 TraesCS1D01G274200 chr4B 82.567 522 86 5 5754 6275 474608270 474607754 7.590000e-124 455.0
16 TraesCS1D01G274200 chr7D 95.982 2016 64 8 2712 4725 568005803 568007803 0.000000e+00 3258.0
17 TraesCS1D01G274200 chr7D 94.990 2036 57 9 2707 4725 621164037 621162030 0.000000e+00 3153.0
18 TraesCS1D01G274200 chr7D 97.027 370 11 0 4667 5036 568007794 568008163 1.970000e-174 623.0
19 TraesCS1D01G274200 chr7A 92.046 2326 139 18 2712 5034 680902488 680904770 0.000000e+00 3229.0
20 TraesCS1D01G274200 chr7A 94.494 2016 102 3 2712 4725 167798334 167800342 0.000000e+00 3099.0
21 TraesCS1D01G274200 chr7A 96.552 87 3 0 5579 5665 374987573 374987659 1.870000e-30 145.0
22 TraesCS1D01G274200 chr4D 95.101 2021 77 12 2712 4725 466291063 466289058 0.000000e+00 3164.0
23 TraesCS1D01G274200 chr4D 85.906 149 11 5 6280 6421 268664706 268664851 4.010000e-32 150.0
24 TraesCS1D01G274200 chr3D 94.849 2019 83 8 2710 4725 479624416 479622416 0.000000e+00 3133.0
25 TraesCS1D01G274200 chr3D 92.694 219 16 0 995 1213 484345581 484345799 3.740000e-82 316.0
26 TraesCS1D01G274200 chr3D 84.868 152 16 4 6280 6425 264981287 264981437 5.190000e-31 147.0
27 TraesCS1D01G274200 chr3D 84.298 121 19 0 6282 6402 98866820 98866940 1.130000e-22 119.0
28 TraesCS1D01G274200 chr3D 89.333 75 8 0 1538 1612 484346249 484346323 1.910000e-15 95.3
29 TraesCS1D01G274200 chr7B 91.045 2345 134 25 2712 5034 639857642 639855352 0.000000e+00 3097.0
30 TraesCS1D01G274200 chr2D 90.497 2336 148 22 2710 5038 646861905 646864173 0.000000e+00 3016.0
31 TraesCS1D01G274200 chr2D 93.291 1908 88 12 3145 5036 587385201 587387084 0.000000e+00 2778.0
32 TraesCS1D01G274200 chr2D 91.737 2021 124 15 2710 4724 646798392 646800375 0.000000e+00 2767.0
33 TraesCS1D01G274200 chr2D 91.638 2021 126 12 2710 4724 646959766 646961749 0.000000e+00 2756.0
34 TraesCS1D01G274200 chr2D 91.390 2021 121 14 2710 4724 646882168 646884141 0.000000e+00 2719.0
35 TraesCS1D01G274200 chr2D 85.714 518 73 1 5754 6271 248937730 248937214 4.380000e-151 545.0
36 TraesCS1D01G274200 chr2D 90.984 122 11 0 6280 6401 485111181 485111060 1.430000e-36 165.0
37 TraesCS1D01G274200 chr2D 89.231 65 5 2 2231 2294 302262787 302262724 5.340000e-11 80.5
38 TraesCS1D01G274200 chr2D 95.455 44 2 0 6382 6425 485111067 485111024 3.210000e-08 71.3
39 TraesCS1D01G274200 chr3A 93.657 2018 92 15 2712 4725 113365388 113367373 0.000000e+00 2985.0
40 TraesCS1D01G274200 chr3A 87.578 483 58 2 5751 6232 199662580 199663061 5.630000e-155 558.0
41 TraesCS1D01G274200 chr3A 92.857 224 15 1 990 1213 627275625 627275847 2.230000e-84 324.0
42 TraesCS1D01G274200 chr3A 83.796 216 30 1 1000 1215 107617999 107617789 3.930000e-47 200.0
43 TraesCS1D01G274200 chr3A 91.358 81 7 0 1296 1376 627275942 627276022 1.890000e-20 111.0
44 TraesCS1D01G274200 chr3A 88.571 70 8 0 1538 1607 627276288 627276357 1.150000e-12 86.1
45 TraesCS1D01G274200 chr3B 91.150 2034 115 25 2711 4725 745590531 745588544 0.000000e+00 2699.0
46 TraesCS1D01G274200 chr3B 90.553 2043 123 18 2712 4725 581035089 581033088 0.000000e+00 2639.0
47 TraesCS1D01G274200 chr3B 90.753 1860 96 27 2883 4725 771412433 771414233 0.000000e+00 2412.0
48 TraesCS1D01G274200 chr3B 88.919 1110 93 12 2711 3796 782820616 782819513 0.000000e+00 1341.0
49 TraesCS1D01G274200 chr3B 93.617 423 24 3 2712 3132 79287260 79286839 4.230000e-176 628.0
50 TraesCS1D01G274200 chr3B 87.474 479 59 1 5754 6232 243309361 243308884 9.420000e-153 551.0
51 TraesCS1D01G274200 chr3B 91.781 219 18 0 995 1213 647177884 647178102 8.090000e-79 305.0
52 TraesCS1D01G274200 chr3B 91.358 81 7 0 1296 1376 647178235 647178315 1.890000e-20 111.0
53 TraesCS1D01G274200 chr3B 90.000 70 7 0 1538 1607 647178615 647178684 2.470000e-14 91.6
54 TraesCS1D01G274200 chr3B 98.000 50 1 0 2244 2293 448733271 448733320 3.190000e-13 87.9
55 TraesCS1D01G274200 chr1B 87.246 2360 146 72 431 2711 492358644 492356361 0.000000e+00 2547.0
56 TraesCS1D01G274200 chr1B 89.455 550 33 8 5034 5581 492356364 492355838 0.000000e+00 671.0
57 TraesCS1D01G274200 chr1B 85.071 422 44 8 1 422 492359092 492358690 4.640000e-111 412.0
58 TraesCS1D01G274200 chr1B 93.750 96 5 1 5573 5668 300581346 300581252 6.710000e-30 143.0
59 TraesCS1D01G274200 chr1B 90.323 62 5 1 2233 2293 266924028 266923967 5.340000e-11 80.5
60 TraesCS1D01G274200 chr1B 100.000 39 0 0 5716 5754 492355650 492355612 8.940000e-09 73.1
61 TraesCS1D01G274200 chr1A 84.501 1484 151 45 1000 2474 467259928 467258515 0.000000e+00 1393.0
62 TraesCS1D01G274200 chr1A 83.425 543 27 23 428 927 467260491 467259969 4.570000e-121 446.0
63 TraesCS1D01G274200 chr1A 88.796 357 31 5 66 422 467260880 467260533 4.600000e-116 429.0
64 TraesCS1D01G274200 chr1A 85.757 337 29 5 5245 5581 467258216 467257899 7.980000e-89 339.0
65 TraesCS1D01G274200 chr1A 94.891 137 7 0 5040 5176 467258345 467258209 1.400000e-51 215.0
66 TraesCS1D01G274200 chr1A 81.395 215 17 10 461 652 468593151 468592937 3.100000e-33 154.0
67 TraesCS1D01G274200 chr1A 86.131 137 14 5 2539 2675 467258493 467258362 6.710000e-30 143.0
68 TraesCS1D01G274200 chr1A 94.565 92 5 0 5577 5668 514886272 514886363 6.710000e-30 143.0
69 TraesCS1D01G274200 chr1A 94.565 92 5 0 5577 5668 515142538 515142629 6.710000e-30 143.0
70 TraesCS1D01G274200 chr1A 96.386 83 1 1 5663 5743 467257900 467257818 1.120000e-27 135.0
71 TraesCS1D01G274200 chr4A 90.783 575 51 2 4461 5034 619164591 619164018 0.000000e+00 767.0
72 TraesCS1D01G274200 chr4A 75.781 512 116 7 5754 6263 56346394 56345889 1.070000e-62 252.0
73 TraesCS1D01G274200 chr4A 93.750 96 4 1 5580 5675 644038554 644038461 6.710000e-30 143.0
74 TraesCS1D01G274200 chr4A 93.750 96 4 1 5580 5675 644075157 644075064 6.710000e-30 143.0
75 TraesCS1D01G274200 chr4A 97.059 34 1 0 366 399 23609785 23609752 2.500000e-04 58.4
76 TraesCS1D01G274200 chr5A 84.674 522 74 5 5751 6271 218113407 218113923 3.430000e-142 516.0
77 TraesCS1D01G274200 chr5A 93.220 59 1 3 2236 2293 460272718 460272662 4.130000e-12 84.2
78 TraesCS1D01G274200 chr5D 84.259 216 28 2 1000 1215 10495639 10495430 8.440000e-49 206.0
79 TraesCS1D01G274200 chr5D 84.259 216 29 1 1000 1215 511490988 511490778 8.440000e-49 206.0
80 TraesCS1D01G274200 chr5D 85.816 141 20 0 6282 6422 87788943 87789083 4.010000e-32 150.0
81 TraesCS1D01G274200 chr5D 93.878 98 5 1 5577 5674 369424158 369424254 5.190000e-31 147.0
82 TraesCS1D01G274200 chr2A 89.262 149 10 2 6280 6422 204434337 204434485 1.420000e-41 182.0
83 TraesCS1D01G274200 chr2A 93.684 95 5 1 5575 5668 102901038 102900944 2.420000e-29 141.0
84 TraesCS1D01G274200 chr2A 96.078 51 2 0 2242 2292 616055801 616055751 4.130000e-12 84.2
85 TraesCS1D01G274200 chr6B 86.486 148 14 1 6283 6424 535455672 535455525 2.400000e-34 158.0
86 TraesCS1D01G274200 chrUn 95.349 86 4 0 5580 5665 316007525 316007610 3.120000e-28 137.0
87 TraesCS1D01G274200 chr5B 83.495 103 17 0 6294 6396 457420906 457420804 5.300000e-16 97.1
88 TraesCS1D01G274200 chr5B 90.476 63 5 1 2232 2293 322205044 322205106 1.480000e-11 82.4
89 TraesCS1D01G274200 chr2B 81.356 118 22 0 6285 6402 100484538 100484421 5.300000e-16 97.1
90 TraesCS1D01G274200 chr2B 88.060 67 4 3 2231 2293 534232764 534232698 6.910000e-10 76.8
91 TraesCS1D01G274200 chr6A 87.879 66 5 3 2251 2315 116140776 116140713 2.480000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G274200 chr1D 369898541 369904965 6424 True 11865.000000 11865 100.000000 1 6425 1 chr1D.!!$R2 6424
1 TraesCS1D01G274200 chr1D 481924973 481927285 2312 True 3356.000000 3356 92.866000 2712 5034 1 chr1D.!!$R4 2322
2 TraesCS1D01G274200 chr1D 368320318 368323412 3094 True 1127.000000 2200 90.185000 160 5581 3 chr1D.!!$R5 5421
3 TraesCS1D01G274200 chr1D 467502016 467502753 737 True 1013.000000 1013 91.247000 4284 5037 1 chr1D.!!$R3 753
4 TraesCS1D01G274200 chr6D 446602926 446605238 2312 False 3687.000000 3687 95.371000 2709 5035 1 chr6D.!!$F3 2326
5 TraesCS1D01G274200 chr4B 529673698 529675954 2256 False 3415.000000 3415 93.966000 2712 4981 1 chr4B.!!$F2 2269
6 TraesCS1D01G274200 chr4B 323461916 323462430 514 True 488.000000 488 83.784000 5754 6271 1 chr4B.!!$R1 517
7 TraesCS1D01G274200 chr4B 283885639 283886161 522 False 462.000000 462 82.667000 5755 6277 1 chr4B.!!$F1 522
8 TraesCS1D01G274200 chr4B 474607754 474608270 516 True 455.000000 455 82.567000 5754 6275 1 chr4B.!!$R2 521
9 TraesCS1D01G274200 chr7D 621162030 621164037 2007 True 3153.000000 3153 94.990000 2707 4725 1 chr7D.!!$R1 2018
10 TraesCS1D01G274200 chr7D 568005803 568008163 2360 False 1940.500000 3258 96.504500 2712 5036 2 chr7D.!!$F1 2324
11 TraesCS1D01G274200 chr7A 680902488 680904770 2282 False 3229.000000 3229 92.046000 2712 5034 1 chr7A.!!$F3 2322
12 TraesCS1D01G274200 chr7A 167798334 167800342 2008 False 3099.000000 3099 94.494000 2712 4725 1 chr7A.!!$F1 2013
13 TraesCS1D01G274200 chr4D 466289058 466291063 2005 True 3164.000000 3164 95.101000 2712 4725 1 chr4D.!!$R1 2013
14 TraesCS1D01G274200 chr3D 479622416 479624416 2000 True 3133.000000 3133 94.849000 2710 4725 1 chr3D.!!$R1 2015
15 TraesCS1D01G274200 chr3D 484345581 484346323 742 False 205.650000 316 91.013500 995 1612 2 chr3D.!!$F3 617
16 TraesCS1D01G274200 chr7B 639855352 639857642 2290 True 3097.000000 3097 91.045000 2712 5034 1 chr7B.!!$R1 2322
17 TraesCS1D01G274200 chr2D 646861905 646864173 2268 False 3016.000000 3016 90.497000 2710 5038 1 chr2D.!!$F3 2328
18 TraesCS1D01G274200 chr2D 587385201 587387084 1883 False 2778.000000 2778 93.291000 3145 5036 1 chr2D.!!$F1 1891
19 TraesCS1D01G274200 chr2D 646798392 646800375 1983 False 2767.000000 2767 91.737000 2710 4724 1 chr2D.!!$F2 2014
20 TraesCS1D01G274200 chr2D 646959766 646961749 1983 False 2756.000000 2756 91.638000 2710 4724 1 chr2D.!!$F5 2014
21 TraesCS1D01G274200 chr2D 646882168 646884141 1973 False 2719.000000 2719 91.390000 2710 4724 1 chr2D.!!$F4 2014
22 TraesCS1D01G274200 chr2D 248937214 248937730 516 True 545.000000 545 85.714000 5754 6271 1 chr2D.!!$R1 517
23 TraesCS1D01G274200 chr3A 113365388 113367373 1985 False 2985.000000 2985 93.657000 2712 4725 1 chr3A.!!$F1 2013
24 TraesCS1D01G274200 chr3B 745588544 745590531 1987 True 2699.000000 2699 91.150000 2711 4725 1 chr3B.!!$R4 2014
25 TraesCS1D01G274200 chr3B 581033088 581035089 2001 True 2639.000000 2639 90.553000 2712 4725 1 chr3B.!!$R3 2013
26 TraesCS1D01G274200 chr3B 771412433 771414233 1800 False 2412.000000 2412 90.753000 2883 4725 1 chr3B.!!$F2 1842
27 TraesCS1D01G274200 chr3B 782819513 782820616 1103 True 1341.000000 1341 88.919000 2711 3796 1 chr3B.!!$R5 1085
28 TraesCS1D01G274200 chr1B 492355612 492359092 3480 True 925.775000 2547 90.443000 1 5754 4 chr1B.!!$R3 5753
29 TraesCS1D01G274200 chr1A 467257818 467260880 3062 True 442.857143 1393 88.555286 66 5743 7 chr1A.!!$R2 5677
30 TraesCS1D01G274200 chr4A 619164018 619164591 573 True 767.000000 767 90.783000 4461 5034 1 chr4A.!!$R3 573
31 TraesCS1D01G274200 chr4A 56345889 56346394 505 True 252.000000 252 75.781000 5754 6263 1 chr4A.!!$R2 509
32 TraesCS1D01G274200 chr5A 218113407 218113923 516 False 516.000000 516 84.674000 5751 6271 1 chr5A.!!$F1 520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
680 749 0.036732 ACCGGAGTAGTGTCGTGGTA 59.963 55.0 9.46 0.0 0.00 3.25 F
1239 1391 0.105607 GACCCCTCGAGTCCCCTTAT 60.106 60.0 12.31 0.0 0.00 1.73 F
1354 1510 0.179018 AGGTCTTTGTCAAGGCGCTT 60.179 50.0 7.64 0.0 35.20 4.68 F
1953 2235 0.517316 CTGGTTTACCGCAGCTTGTC 59.483 55.0 0.00 0.0 39.43 3.18 F
3341 3686 0.468226 TCAGCTTGACCGTCACCTTT 59.532 50.0 0.00 0.0 0.00 3.11 F
3796 4204 0.844661 TTACTCACCCTGCCCACCAT 60.845 55.0 0.00 0.0 0.00 3.55 F
4760 5263 0.336737 GAAGAGTGGGGAGAGGGAGA 59.663 60.0 0.00 0.0 0.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1710 1985 0.459899 AACGCCGATCAGATAGCACA 59.540 50.000 0.0 0.0 0.00 4.57 R
3167 3510 0.249868 TTGAGGTCGTCAGCAAGTGG 60.250 55.000 0.0 0.0 36.21 4.00 R
3341 3686 3.241530 AACACCGGCTGCTCCTGA 61.242 61.111 0.0 0.0 0.00 3.86 R
3796 4204 1.069775 GAGAGGGGGTGGGTAAACAA 58.930 55.000 0.0 0.0 0.00 2.83 R
4619 5053 0.311165 CGCTAGATTCGATCCACGGT 59.689 55.000 0.0 0.0 42.82 4.83 R
5254 5758 0.730494 GCACGCCAAAGATCAGCAAC 60.730 55.000 0.0 0.0 0.00 4.17 R
5815 6480 0.036388 GAACACCTCCAATCAGGCGA 60.036 55.000 0.0 0.0 36.98 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 7.464830 AGTATGAATAATCGTGTGCAAGTAC 57.535 36.000 0.00 0.00 0.00 2.73
38 39 5.778161 TGAATAATCGTGTGCAAGTACAG 57.222 39.130 0.00 0.00 0.00 2.74
39 40 4.092821 TGAATAATCGTGTGCAAGTACAGC 59.907 41.667 0.00 0.00 0.00 4.40
42 43 1.217001 TCGTGTGCAAGTACAGCAAG 58.783 50.000 13.62 9.12 44.64 4.01
48 49 1.308783 GCAAGTACAGCAAGGAGGCC 61.309 60.000 0.00 0.00 0.00 5.19
53 54 1.209504 GTACAGCAAGGAGGCCACATA 59.790 52.381 5.01 0.00 0.00 2.29
60 61 3.091545 CAAGGAGGCCACATAACATTGT 58.908 45.455 5.01 0.00 0.00 2.71
61 62 2.726821 AGGAGGCCACATAACATTGTG 58.273 47.619 5.01 0.00 45.28 3.33
62 63 2.041620 AGGAGGCCACATAACATTGTGT 59.958 45.455 5.01 0.00 44.42 3.72
63 64 2.423538 GGAGGCCACATAACATTGTGTC 59.576 50.000 5.01 0.00 44.42 3.67
64 65 3.347216 GAGGCCACATAACATTGTGTCT 58.653 45.455 5.01 1.72 44.42 3.41
108 109 7.693969 TCAAATTCTGAGAAGAAAGGAATCC 57.306 36.000 0.00 0.00 0.00 3.01
130 131 0.888736 TGCATCCAAACAGGTCGTGG 60.889 55.000 0.00 0.00 39.02 4.94
133 134 2.773487 CATCCAAACAGGTCGTGGTTA 58.227 47.619 0.00 0.00 31.77 2.85
171 172 5.918426 TGATATTTCCAGCAAGCAATTCA 57.082 34.783 0.00 0.00 0.00 2.57
181 182 2.664916 CAAGCAATTCAAACAGTCGGG 58.335 47.619 0.00 0.00 0.00 5.14
202 203 3.265791 GCAAACAACAACATTGGAACCA 58.734 40.909 0.00 0.00 0.00 3.67
235 236 6.855836 TCAAAATTTCAATTCCGGAGATGAG 58.144 36.000 17.49 8.42 0.00 2.90
275 277 4.083110 AGTTCTGCAGACCAATTCAATTCG 60.083 41.667 18.03 0.00 0.00 3.34
322 324 7.223193 CAGAGATTTTCTGCAAACATTTGTTGA 59.777 33.333 6.24 2.65 46.30 3.18
333 335 6.901357 GCAAACATTTGTTGATGAAAGTTGAC 59.099 34.615 6.24 0.00 40.24 3.18
364 366 3.643792 GGTTGATGATGGCTACTCCTACT 59.356 47.826 0.00 0.00 35.26 2.57
365 367 4.833380 GGTTGATGATGGCTACTCCTACTA 59.167 45.833 0.00 0.00 35.26 1.82
366 368 5.047660 GGTTGATGATGGCTACTCCTACTAG 60.048 48.000 0.00 0.00 35.26 2.57
367 369 5.326283 TGATGATGGCTACTCCTACTAGT 57.674 43.478 0.00 0.00 35.26 2.57
368 370 6.449830 TGATGATGGCTACTCCTACTAGTA 57.550 41.667 1.89 1.89 35.26 1.82
545 598 1.453155 TGATGCTCGAGCCTTTTTCC 58.547 50.000 33.23 12.57 41.18 3.13
575 636 9.569167 TCTTCTTTATCACTCTACATGTAAACG 57.431 33.333 7.06 1.00 0.00 3.60
630 691 6.835174 ACATAGGATAGGAGTAGTACGAACA 58.165 40.000 0.00 0.00 0.00 3.18
680 749 0.036732 ACCGGAGTAGTGTCGTGGTA 59.963 55.000 9.46 0.00 0.00 3.25
705 774 1.639298 GGCACAAGCGCTTCCTGTAG 61.639 60.000 22.21 10.70 43.41 2.74
706 775 1.790387 CACAAGCGCTTCCTGTAGC 59.210 57.895 22.21 0.00 37.80 3.58
707 776 1.376037 ACAAGCGCTTCCTGTAGCC 60.376 57.895 22.21 0.00 37.90 3.93
708 777 2.109126 CAAGCGCTTCCTGTAGCCC 61.109 63.158 22.21 0.00 37.90 5.19
910 1011 1.401018 GGCGGTGCAATCTGTTTGTAC 60.401 52.381 10.13 10.13 46.60 2.90
915 1016 2.095919 GTGCAATCTGTTTGTACCCGTC 60.096 50.000 8.05 0.00 42.97 4.79
916 1017 2.147958 GCAATCTGTTTGTACCCGTCA 58.852 47.619 0.00 0.00 37.65 4.35
917 1018 2.095919 GCAATCTGTTTGTACCCGTCAC 60.096 50.000 0.00 0.00 37.65 3.67
918 1019 3.399330 CAATCTGTTTGTACCCGTCACT 58.601 45.455 0.00 0.00 0.00 3.41
919 1020 2.806608 TCTGTTTGTACCCGTCACTC 57.193 50.000 0.00 0.00 0.00 3.51
920 1021 1.342174 TCTGTTTGTACCCGTCACTCC 59.658 52.381 0.00 0.00 0.00 3.85
921 1022 0.393820 TGTTTGTACCCGTCACTCCC 59.606 55.000 0.00 0.00 0.00 4.30
922 1023 0.393820 GTTTGTACCCGTCACTCCCA 59.606 55.000 0.00 0.00 0.00 4.37
923 1024 0.393820 TTTGTACCCGTCACTCCCAC 59.606 55.000 0.00 0.00 0.00 4.61
924 1025 1.474332 TTGTACCCGTCACTCCCACC 61.474 60.000 0.00 0.00 0.00 4.61
925 1026 2.284112 TACCCGTCACTCCCACCC 60.284 66.667 0.00 0.00 0.00 4.61
926 1027 3.910784 TACCCGTCACTCCCACCCC 62.911 68.421 0.00 0.00 0.00 4.95
928 1029 3.391382 CCGTCACTCCCACCCCTC 61.391 72.222 0.00 0.00 0.00 4.30
929 1030 3.760035 CGTCACTCCCACCCCTCG 61.760 72.222 0.00 0.00 0.00 4.63
930 1031 2.603776 GTCACTCCCACCCCTCGT 60.604 66.667 0.00 0.00 0.00 4.18
931 1032 2.283676 TCACTCCCACCCCTCGTC 60.284 66.667 0.00 0.00 0.00 4.20
932 1033 3.391382 CACTCCCACCCCTCGTCC 61.391 72.222 0.00 0.00 0.00 4.79
933 1034 4.716977 ACTCCCACCCCTCGTCCC 62.717 72.222 0.00 0.00 0.00 4.46
1214 1346 4.389576 CAACGTCCAGGCAAGCGC 62.390 66.667 0.00 0.00 37.44 5.92
1230 1362 4.452733 GCCAACCGACCCCTCGAG 62.453 72.222 5.13 5.13 43.06 4.04
1239 1391 0.105607 GACCCCTCGAGTCCCCTTAT 60.106 60.000 12.31 0.00 0.00 1.73
1262 1414 3.476552 TCGCTTTGTTTCCAATCTCTGT 58.523 40.909 0.00 0.00 0.00 3.41
1276 1428 4.292208 CTGTGCGCGCGTTGACAA 62.292 61.111 32.35 14.12 0.00 3.18
1287 1439 1.937362 GTTGACAAACGTGCACGGC 60.937 57.895 39.21 23.33 44.95 5.68
1288 1440 3.114647 TTGACAAACGTGCACGGCC 62.115 57.895 39.21 23.31 44.95 6.13
1354 1510 0.179018 AGGTCTTTGTCAAGGCGCTT 60.179 50.000 7.64 0.00 35.20 4.68
1380 1536 3.204505 GCGGCCGCACTGTAATATA 57.795 52.632 43.55 0.00 41.49 0.86
1627 1898 0.527385 GCGCTCCTCTTACTCTGCTG 60.527 60.000 0.00 0.00 0.00 4.41
1630 1901 1.206849 GCTCCTCTTACTCTGCTGCTT 59.793 52.381 0.00 0.00 0.00 3.91
1632 1903 2.760092 CTCCTCTTACTCTGCTGCTTCT 59.240 50.000 0.00 0.00 0.00 2.85
1633 1904 2.757868 TCCTCTTACTCTGCTGCTTCTC 59.242 50.000 0.00 0.00 0.00 2.87
1634 1905 2.159114 CCTCTTACTCTGCTGCTTCTCC 60.159 54.545 0.00 0.00 0.00 3.71
1640 1913 1.079266 CTGCTGCTTCTCCGAGCTT 60.079 57.895 0.00 0.00 43.11 3.74
1670 1944 2.957680 TGACTGGTTCAGTACACCGTTA 59.042 45.455 0.11 0.00 45.44 3.18
1706 1981 2.820059 TGTCTGCTGGTTACTCACTG 57.180 50.000 0.00 0.00 0.00 3.66
1707 1982 1.270305 TGTCTGCTGGTTACTCACTGC 60.270 52.381 0.00 0.00 0.00 4.40
1708 1983 1.001406 GTCTGCTGGTTACTCACTGCT 59.999 52.381 0.00 0.00 0.00 4.24
1709 1984 2.231478 GTCTGCTGGTTACTCACTGCTA 59.769 50.000 0.00 0.00 0.00 3.49
1710 1985 3.099905 TCTGCTGGTTACTCACTGCTAT 58.900 45.455 0.00 0.00 0.00 2.97
1711 1986 3.118992 TCTGCTGGTTACTCACTGCTATG 60.119 47.826 0.00 0.00 0.00 2.23
1712 1987 2.567169 TGCTGGTTACTCACTGCTATGT 59.433 45.455 0.00 0.00 0.00 2.29
1788 2063 0.878961 AAGACAAGGACAACGCGACC 60.879 55.000 15.93 10.71 0.00 4.79
1929 2211 4.956700 ACCTCTTCATCCTAGATTCAACGA 59.043 41.667 0.00 0.00 0.00 3.85
1953 2235 0.517316 CTGGTTTACCGCAGCTTGTC 59.483 55.000 0.00 0.00 39.43 3.18
1954 2236 0.887387 TGGTTTACCGCAGCTTGTCC 60.887 55.000 0.00 0.00 39.43 4.02
1986 2268 1.530323 ACGGTGTAAATGGCTTCACC 58.470 50.000 0.00 0.00 44.54 4.02
2060 2342 0.520404 GATGCAGGTCACAGCAACAG 59.480 55.000 0.00 0.00 42.60 3.16
2061 2343 1.521450 ATGCAGGTCACAGCAACAGC 61.521 55.000 0.00 0.00 42.60 4.40
2062 2344 2.188829 GCAGGTCACAGCAACAGCA 61.189 57.895 0.00 0.00 0.00 4.41
2063 2345 1.727511 GCAGGTCACAGCAACAGCAA 61.728 55.000 0.00 0.00 0.00 3.91
2066 2348 1.655350 GTCACAGCAACAGCAACGC 60.655 57.895 0.00 0.00 0.00 4.84
2067 2349 2.111582 TCACAGCAACAGCAACGCA 61.112 52.632 0.00 0.00 0.00 5.24
2068 2350 1.940758 CACAGCAACAGCAACGCAC 60.941 57.895 0.00 0.00 0.00 5.34
2069 2351 2.405805 ACAGCAACAGCAACGCACA 61.406 52.632 0.00 0.00 0.00 4.57
2070 2352 1.226632 CAGCAACAGCAACGCACAA 60.227 52.632 0.00 0.00 0.00 3.33
2073 2355 0.929615 GCAACAGCAACGCACAATTT 59.070 45.000 0.00 0.00 0.00 1.82
2111 2393 3.067180 CACTGATGACCTGCAACAAAAGT 59.933 43.478 0.00 0.00 0.00 2.66
2113 2395 4.202050 ACTGATGACCTGCAACAAAAGTTC 60.202 41.667 0.00 0.00 0.00 3.01
2114 2396 3.953612 TGATGACCTGCAACAAAAGTTCT 59.046 39.130 0.00 0.00 0.00 3.01
2118 2400 1.136695 CCTGCAACAAAAGTTCTGCCA 59.863 47.619 0.00 0.00 33.78 4.92
2129 2411 6.930722 ACAAAAGTTCTGCCAAAATCCTATTG 59.069 34.615 0.00 0.00 0.00 1.90
2138 2420 5.714333 TGCCAAAATCCTATTGTATGTGTGT 59.286 36.000 0.00 0.00 0.00 3.72
2140 2422 6.751888 GCCAAAATCCTATTGTATGTGTGTTC 59.248 38.462 0.00 0.00 0.00 3.18
2152 2434 6.345298 TGTATGTGTGTTCAACTCTTCTTGA 58.655 36.000 0.00 0.00 0.00 3.02
2241 2523 2.678336 GCCCACTGCAAAGTATGTACTC 59.322 50.000 0.00 0.00 40.77 2.59
2243 2525 3.055094 CCCACTGCAAAGTATGTACTCCT 60.055 47.826 0.00 0.00 34.99 3.69
2244 2526 4.161565 CCCACTGCAAAGTATGTACTCCTA 59.838 45.833 0.00 0.00 34.99 2.94
2247 2529 6.398918 CACTGCAAAGTATGTACTCCTACTT 58.601 40.000 9.07 9.07 39.30 2.24
2249 2531 7.488471 CACTGCAAAGTATGTACTCCTACTTAC 59.512 40.741 13.05 10.38 37.23 2.34
2250 2532 7.396623 ACTGCAAAGTATGTACTCCTACTTACT 59.603 37.037 13.05 0.00 41.95 2.24
2251 2533 8.812513 TGCAAAGTATGTACTCCTACTTACTA 57.187 34.615 13.05 4.41 40.47 1.82
2252 2534 8.680903 TGCAAAGTATGTACTCCTACTTACTAC 58.319 37.037 13.05 7.01 40.47 2.73
2255 2537 9.625747 AAAGTATGTACTCCTACTTACTACTCC 57.374 37.037 13.05 0.00 40.47 3.85
2257 2539 6.845168 ATGTACTCCTACTTACTACTCCCT 57.155 41.667 0.00 0.00 0.00 4.20
2258 2540 6.245890 TGTACTCCTACTTACTACTCCCTC 57.754 45.833 0.00 0.00 0.00 4.30
2259 2541 4.794311 ACTCCTACTTACTACTCCCTCC 57.206 50.000 0.00 0.00 0.00 4.30
2260 2542 3.136260 ACTCCTACTTACTACTCCCTCCG 59.864 52.174 0.00 0.00 0.00 4.63
2261 2543 3.118531 TCCTACTTACTACTCCCTCCGT 58.881 50.000 0.00 0.00 0.00 4.69
2262 2544 3.525199 TCCTACTTACTACTCCCTCCGTT 59.475 47.826 0.00 0.00 0.00 4.44
2263 2545 3.882288 CCTACTTACTACTCCCTCCGTTC 59.118 52.174 0.00 0.00 0.00 3.95
2264 2546 2.732763 ACTTACTACTCCCTCCGTTCC 58.267 52.381 0.00 0.00 0.00 3.62
2265 2547 2.042162 ACTTACTACTCCCTCCGTTCCA 59.958 50.000 0.00 0.00 0.00 3.53
2266 2548 2.905415 TACTACTCCCTCCGTTCCAA 57.095 50.000 0.00 0.00 0.00 3.53
2268 2550 2.547990 ACTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
2269 2551 2.910977 ACTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
2270 2552 4.098894 ACTACTCCCTCCGTTCCAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
2271 2553 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
2272 2554 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
2273 2555 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
2274 2556 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
2275 2557 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
2276 2558 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
2277 2559 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
2278 2560 2.030007 TCCGTTCCAAATTACTCGTCGT 60.030 45.455 0.00 0.00 0.00 4.34
2279 2561 2.091588 CCGTTCCAAATTACTCGTCGTG 59.908 50.000 0.00 0.00 0.00 4.35
2280 2562 2.091588 CGTTCCAAATTACTCGTCGTGG 59.908 50.000 0.00 0.00 0.00 4.94
2281 2563 3.062042 GTTCCAAATTACTCGTCGTGGT 58.938 45.455 0.00 0.00 0.00 4.16
2282 2564 3.389925 TCCAAATTACTCGTCGTGGTT 57.610 42.857 0.00 0.00 0.00 3.67
2283 2565 3.731089 TCCAAATTACTCGTCGTGGTTT 58.269 40.909 0.00 0.00 0.00 3.27
2284 2566 4.128643 TCCAAATTACTCGTCGTGGTTTT 58.871 39.130 0.00 0.00 0.00 2.43
2285 2567 5.295950 TCCAAATTACTCGTCGTGGTTTTA 58.704 37.500 0.00 0.00 0.00 1.52
2286 2568 5.406175 TCCAAATTACTCGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 0.00 1.85
2287 2569 5.178067 CCAAATTACTCGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 0.00 2.24
2288 2570 6.293027 CCAAATTACTCGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 0.00 2.24
2289 2571 6.849588 AATTACTCGTCGTGGTTTTAGTTT 57.150 33.333 0.00 0.00 0.00 2.66
2300 2582 7.858879 GTCGTGGTTTTAGTTTAAACATCACAT 59.141 33.333 20.06 1.17 39.27 3.21
2340 2630 1.154035 GCCAACATTGCAGGTACGC 60.154 57.895 0.00 0.00 0.00 4.42
2395 2685 5.734720 TCGCCAAAATCCCTGAGATATATC 58.265 41.667 4.42 4.42 33.66 1.63
2401 2691 6.552445 AAATCCCTGAGATATATCGGAAGG 57.448 41.667 17.78 17.78 33.66 3.46
2402 2692 4.676799 TCCCTGAGATATATCGGAAGGT 57.323 45.455 20.71 1.48 0.00 3.50
2403 2693 4.344978 TCCCTGAGATATATCGGAAGGTG 58.655 47.826 20.71 15.29 0.00 4.00
2404 2694 4.044191 TCCCTGAGATATATCGGAAGGTGA 59.956 45.833 20.71 16.55 0.00 4.02
2414 2704 1.821061 CGGAAGGTGAGTGAGTGCCT 61.821 60.000 0.00 0.00 0.00 4.75
2434 2724 3.745458 CCTGTCTTTCAGCTGTTTCTCTC 59.255 47.826 14.67 0.87 42.38 3.20
2451 2742 5.462530 TCTCTCACATCAAACCGAAACTA 57.537 39.130 0.00 0.00 0.00 2.24
2461 2752 2.851263 ACCGAAACTATTCCACAGCA 57.149 45.000 0.00 0.00 31.52 4.41
2481 2772 0.531200 AATTCAGTCCGACTCCGACC 59.469 55.000 0.00 0.00 38.22 4.79
2493 2785 2.175035 CTCCGACCGCCCCTGTTTTA 62.175 60.000 0.00 0.00 0.00 1.52
2497 2789 1.671979 GACCGCCCCTGTTTTATACC 58.328 55.000 0.00 0.00 0.00 2.73
2611 2910 1.078848 CCGACAAGAAGAGCCCCAG 60.079 63.158 0.00 0.00 0.00 4.45
2619 2918 3.273788 AAGAGCCCCAGCGGAAAGG 62.274 63.158 0.00 0.00 46.67 3.11
2685 2988 2.802816 CCAGCTGATTACGCTTATCCAC 59.197 50.000 17.39 0.00 35.07 4.02
2700 3003 1.003355 CCACGTGCATTCCTGAGGT 60.003 57.895 10.91 0.00 0.00 3.85
2773 3076 0.890996 CACTTCTCCACCCAACCTGC 60.891 60.000 0.00 0.00 0.00 4.85
2843 3163 1.202806 GCATGCCCTCTTACCTGCATA 60.203 52.381 6.36 0.00 42.22 3.14
2898 3222 2.228822 GCATGTTAGTCCACAAACCCAG 59.771 50.000 0.00 0.00 0.00 4.45
3002 3336 3.569277 AGCACACATCATAAGCACAACAA 59.431 39.130 0.00 0.00 0.00 2.83
3093 3435 7.653713 ACGCATAAACCATAAACATGTTCAAAA 59.346 29.630 12.39 0.00 0.00 2.44
3167 3510 3.119096 GCTTCGTCGTGCTTCCCC 61.119 66.667 5.91 0.00 0.00 4.81
3274 3619 4.620589 AGCCGATCTTGATCTGATGAAT 57.379 40.909 8.70 0.00 0.00 2.57
3302 3647 2.616458 GGTGGCCCAACCCTGATCT 61.616 63.158 0.00 0.00 37.83 2.75
3341 3686 0.468226 TCAGCTTGACCGTCACCTTT 59.532 50.000 0.00 0.00 0.00 3.11
3643 4036 1.675310 CCTTGCTGTCAATGGCCGA 60.675 57.895 0.00 0.00 0.00 5.54
3753 4161 1.731720 GGCATGACTGTCACTCTTCC 58.268 55.000 13.50 6.29 0.00 3.46
3796 4204 0.844661 TTACTCACCCTGCCCACCAT 60.845 55.000 0.00 0.00 0.00 3.55
4619 5053 1.068541 CGCCGTGGATCGAATCTATCA 60.069 52.381 0.00 0.00 42.86 2.15
4760 5263 0.336737 GAAGAGTGGGGAGAGGGAGA 59.663 60.000 0.00 0.00 0.00 3.71
5045 5549 1.365699 ACACGCCCATGTCGTATTTC 58.634 50.000 9.45 0.00 38.19 2.17
5063 5567 2.281539 TCCAGTGTTCTGTACGAGGA 57.718 50.000 0.00 0.00 39.82 3.71
5175 5679 5.618056 TTTTATCAGAGCAGCACTTTCTG 57.382 39.130 3.46 3.46 39.69 3.02
5210 5714 1.916651 CACTTCGTCTGATTCAGAGCG 59.083 52.381 16.62 19.97 41.46 5.03
5286 5790 1.601903 TGGCGTGCTGTAACTGAAAAG 59.398 47.619 0.00 0.00 0.00 2.27
5291 5795 3.303132 CGTGCTGTAACTGAAAAGTGGTC 60.303 47.826 0.00 0.00 0.00 4.02
5395 5899 6.877855 CGATGATGTGGAGGAGATTAAATCAT 59.122 38.462 0.00 0.00 36.49 2.45
5400 5904 9.512588 GATGTGGAGGAGATTAAATCATTGTAT 57.487 33.333 0.00 0.00 0.00 2.29
5432 5936 1.078848 GCACCGCCTGATCTGAGTT 60.079 57.895 0.38 0.00 0.00 3.01
5445 5949 4.344968 TGATCTGAGTTCCTGAAGACACAA 59.655 41.667 0.00 0.00 0.00 3.33
5463 5967 4.156556 ACACAATACACATGTTCTGCATCC 59.843 41.667 0.00 0.00 35.19 3.51
5471 5996 0.323302 TGTTCTGCATCCCGTTGCTA 59.677 50.000 0.00 0.00 43.18 3.49
5498 6023 3.974871 AAAAGTTATGTTCGGCGTTGT 57.025 38.095 6.85 0.00 0.00 3.32
5499 6024 2.961522 AAGTTATGTTCGGCGTTGTG 57.038 45.000 6.85 0.00 0.00 3.33
5500 6025 2.157834 AGTTATGTTCGGCGTTGTGA 57.842 45.000 6.85 0.00 0.00 3.58
5501 6026 1.796459 AGTTATGTTCGGCGTTGTGAC 59.204 47.619 6.85 0.37 0.00 3.67
5502 6027 1.527736 GTTATGTTCGGCGTTGTGACA 59.472 47.619 6.85 6.06 0.00 3.58
5503 6028 1.867166 TATGTTCGGCGTTGTGACAA 58.133 45.000 6.85 0.00 0.00 3.18
5506 6031 1.202087 TGTTCGGCGTTGTGACAAAAG 60.202 47.619 6.85 0.00 0.00 2.27
5512 6037 2.450160 GCGTTGTGACAAAAGTCCTTG 58.550 47.619 0.00 0.00 0.00 3.61
5518 6043 2.552743 GTGACAAAAGTCCTTGGGTAGC 59.447 50.000 0.00 0.00 0.00 3.58
5535 6062 3.802685 GGTAGCGTTATGGTGATTCTGAC 59.197 47.826 0.00 0.00 0.00 3.51
5538 6065 3.873361 AGCGTTATGGTGATTCTGACATG 59.127 43.478 0.00 0.00 0.00 3.21
5570 6097 4.444536 GCCTCAATGTAACAATACCCGTA 58.555 43.478 0.00 0.00 0.00 4.02
5585 6112 9.359653 ACAATACCCGTATATACATATACTCCC 57.640 37.037 13.22 0.00 41.72 4.30
5586 6113 9.358406 CAATACCCGTATATACATATACTCCCA 57.642 37.037 13.22 2.39 41.72 4.37
5587 6114 8.930846 ATACCCGTATATACATATACTCCCAC 57.069 38.462 13.22 0.00 41.72 4.61
5588 6115 6.978261 ACCCGTATATACATATACTCCCACT 58.022 40.000 13.22 0.00 41.72 4.00
5589 6116 6.832384 ACCCGTATATACATATACTCCCACTG 59.168 42.308 13.22 1.63 41.72 3.66
5590 6117 6.832384 CCCGTATATACATATACTCCCACTGT 59.168 42.308 13.22 0.00 41.72 3.55
5591 6118 7.994911 CCCGTATATACATATACTCCCACTGTA 59.005 40.741 13.22 0.00 41.72 2.74
5592 6119 9.399797 CCGTATATACATATACTCCCACTGTAA 57.600 37.037 13.22 0.00 41.72 2.41
5606 6133 8.422566 ACTCCCACTGTAAACTAATATAAGAGC 58.577 37.037 0.00 0.00 0.00 4.09
5607 6134 7.431249 TCCCACTGTAAACTAATATAAGAGCG 58.569 38.462 0.00 0.00 0.00 5.03
5608 6135 7.069085 TCCCACTGTAAACTAATATAAGAGCGT 59.931 37.037 0.00 0.00 0.00 5.07
5609 6136 7.709613 CCCACTGTAAACTAATATAAGAGCGTT 59.290 37.037 0.00 0.00 0.00 4.84
5610 6137 9.095065 CCACTGTAAACTAATATAAGAGCGTTT 57.905 33.333 0.00 0.00 0.00 3.60
5618 6145 9.601217 AACTAATATAAGAGCGTTTTGATCACT 57.399 29.630 0.00 0.00 34.70 3.41
5623 6150 7.907214 ATAAGAGCGTTTTGATCACTAAAGT 57.093 32.000 0.00 0.00 34.70 2.66
5624 6151 8.997621 ATAAGAGCGTTTTGATCACTAAAGTA 57.002 30.769 0.00 0.00 34.70 2.24
5625 6152 6.952935 AGAGCGTTTTGATCACTAAAGTAG 57.047 37.500 0.00 0.00 34.70 2.57
5626 6153 6.456501 AGAGCGTTTTGATCACTAAAGTAGT 58.543 36.000 0.00 0.00 40.28 2.73
5641 6168 8.828688 ACTAAAGTAGTGATCTAAACGCTTTT 57.171 30.769 10.23 0.00 37.69 2.27
5642 6169 9.918630 ACTAAAGTAGTGATCTAAACGCTTTTA 57.081 29.630 10.23 0.00 37.69 1.52
5658 6185 7.704789 ACGCTTTTATATTAGTTTACGGAGG 57.295 36.000 0.00 0.00 0.00 4.30
5659 6186 6.703165 ACGCTTTTATATTAGTTTACGGAGGG 59.297 38.462 0.00 0.00 0.00 4.30
5660 6187 6.925165 CGCTTTTATATTAGTTTACGGAGGGA 59.075 38.462 0.00 0.00 0.00 4.20
5661 6188 7.115947 CGCTTTTATATTAGTTTACGGAGGGAG 59.884 40.741 0.00 0.00 0.00 4.30
5836 6501 0.321653 GCCTGATTGGAGGTGTTCGT 60.322 55.000 0.00 0.00 38.35 3.85
5889 6554 3.952628 GAAGGAGGAACCGGCACCG 62.953 68.421 0.00 1.02 44.74 4.94
5891 6556 4.324991 GGAGGAACCGGCACCGTT 62.325 66.667 0.00 2.61 37.81 4.44
5963 6630 1.194781 ACTCACCTCCCACATTCGCT 61.195 55.000 0.00 0.00 0.00 4.93
6037 6705 3.441290 CGCGTCGTCCTCCTTCCT 61.441 66.667 0.00 0.00 0.00 3.36
6078 6747 0.760945 CCTTCGGGATAGCACCTCCT 60.761 60.000 0.00 0.00 37.25 3.69
6167 6836 3.090532 GATGCCCCCTCCGAGGTT 61.091 66.667 13.62 0.00 31.93 3.50
6174 6843 2.815647 CCTCCGAGGTTTGCTCGC 60.816 66.667 6.24 0.00 42.33 5.03
6177 6846 4.735132 CCGAGGTTTGCTCGCCGA 62.735 66.667 0.00 0.00 42.33 5.54
6182 6851 2.357034 GTTTGCTCGCCGAGGTGA 60.357 61.111 16.95 5.20 0.00 4.02
6186 6855 4.148825 GCTCGCCGAGGTGACCAT 62.149 66.667 16.95 0.00 0.00 3.55
6188 6857 2.678580 TCGCCGAGGTGACCATGA 60.679 61.111 3.63 0.00 0.00 3.07
6189 6858 2.021068 CTCGCCGAGGTGACCATGAT 62.021 60.000 6.13 0.00 0.00 2.45
6190 6859 0.753848 TCGCCGAGGTGACCATGATA 60.754 55.000 3.63 0.00 0.00 2.15
6242 6911 9.110502 CTCCATTTGTAAGGGACTATTAGAAAC 57.889 37.037 0.00 0.00 38.49 2.78
6277 6946 4.911390 ACAGCCAAGGAATATATACCTGC 58.089 43.478 0.00 0.00 36.56 4.85
6278 6947 4.263506 ACAGCCAAGGAATATATACCTGCC 60.264 45.833 0.00 0.00 36.56 4.85
6279 6948 3.916349 AGCCAAGGAATATATACCTGCCA 59.084 43.478 0.00 0.00 36.56 4.92
6280 6949 4.541714 AGCCAAGGAATATATACCTGCCAT 59.458 41.667 0.00 0.00 36.56 4.40
6281 6950 4.884164 GCCAAGGAATATATACCTGCCATC 59.116 45.833 0.00 0.00 36.56 3.51
6282 6951 5.573502 GCCAAGGAATATATACCTGCCATCA 60.574 44.000 0.00 0.00 36.56 3.07
6283 6952 5.882557 CCAAGGAATATATACCTGCCATCAC 59.117 44.000 0.00 0.00 36.56 3.06
6284 6953 5.700402 AGGAATATATACCTGCCATCACC 57.300 43.478 0.00 0.00 34.99 4.02
6285 6954 5.353986 AGGAATATATACCTGCCATCACCT 58.646 41.667 0.00 0.00 34.99 4.00
6286 6955 5.792712 AGGAATATATACCTGCCATCACCTT 59.207 40.000 0.00 0.00 34.99 3.50
6287 6956 6.965866 AGGAATATATACCTGCCATCACCTTA 59.034 38.462 0.00 0.00 34.99 2.69
6288 6957 7.126421 AGGAATATATACCTGCCATCACCTTAG 59.874 40.741 0.00 0.00 34.99 2.18
6289 6958 6.814954 ATATATACCTGCCATCACCTTAGG 57.185 41.667 0.00 0.00 34.70 2.69
6293 6962 2.908015 GCCATCACCTTAGGCCGA 59.092 61.111 0.00 0.00 42.58 5.54
6294 6963 1.523938 GCCATCACCTTAGGCCGAC 60.524 63.158 0.00 0.00 42.58 4.79
6295 6964 1.904771 CCATCACCTTAGGCCGACA 59.095 57.895 0.00 0.00 0.00 4.35
6296 6965 0.462047 CCATCACCTTAGGCCGACAC 60.462 60.000 0.00 0.00 0.00 3.67
6297 6966 0.537188 CATCACCTTAGGCCGACACT 59.463 55.000 0.00 0.00 0.00 3.55
6298 6967 0.537188 ATCACCTTAGGCCGACACTG 59.463 55.000 0.00 0.00 0.00 3.66
6299 6968 1.741770 CACCTTAGGCCGACACTGC 60.742 63.158 0.00 0.00 0.00 4.40
6305 6974 2.435059 GGCCGACACTGCCTCTTC 60.435 66.667 0.00 0.00 45.70 2.87
6306 6975 2.811317 GCCGACACTGCCTCTTCG 60.811 66.667 0.00 0.00 0.00 3.79
6307 6976 2.125912 CCGACACTGCCTCTTCGG 60.126 66.667 0.00 0.00 44.65 4.30
6308 6977 2.125912 CGACACTGCCTCTTCGGG 60.126 66.667 0.00 0.00 0.00 5.14
6309 6978 2.266055 GACACTGCCTCTTCGGGG 59.734 66.667 0.00 0.00 0.00 5.73
6315 6984 4.168291 GCCTCTTCGGGGCCTGAG 62.168 72.222 15.99 10.06 43.49 3.35
6316 6985 3.474570 CCTCTTCGGGGCCTGAGG 61.475 72.222 18.00 18.00 39.87 3.86
6317 6986 3.474570 CTCTTCGGGGCCTGAGGG 61.475 72.222 22.89 16.03 0.00 4.30
6324 6993 2.612746 GGGCCTGAGGGGGTTGTA 60.613 66.667 0.84 0.00 35.12 2.41
6325 6994 2.675371 GGCCTGAGGGGGTTGTAC 59.325 66.667 0.00 0.00 35.12 2.90
6326 6995 2.675371 GCCTGAGGGGGTTGTACC 59.325 66.667 0.00 0.00 37.60 3.34
6327 6996 2.987125 CCTGAGGGGGTTGTACCG 59.013 66.667 0.00 0.00 39.83 4.02
6334 7003 3.790177 GGGTTGTACCGCATCGAC 58.210 61.111 0.00 0.00 39.83 4.20
6335 7004 2.162754 GGGTTGTACCGCATCGACG 61.163 63.158 0.00 0.00 39.83 5.12
6336 7005 1.444895 GGTTGTACCGCATCGACGT 60.445 57.895 0.00 0.00 0.00 4.34
6337 7006 1.408474 GGTTGTACCGCATCGACGTC 61.408 60.000 5.18 5.18 0.00 4.34
6338 7007 0.455633 GTTGTACCGCATCGACGTCT 60.456 55.000 14.70 0.00 0.00 4.18
6339 7008 0.241749 TTGTACCGCATCGACGTCTT 59.758 50.000 14.70 0.00 0.00 3.01
6340 7009 0.179181 TGTACCGCATCGACGTCTTC 60.179 55.000 14.70 0.00 0.00 2.87
6361 7030 4.082523 CGCCGCCCTCTTCTTGGA 62.083 66.667 0.00 0.00 0.00 3.53
6362 7031 2.124942 GCCGCCCTCTTCTTGGAG 60.125 66.667 0.00 0.00 0.00 3.86
6363 7032 2.960688 GCCGCCCTCTTCTTGGAGT 61.961 63.158 0.00 0.00 0.00 3.85
6364 7033 1.078848 CCGCCCTCTTCTTGGAGTG 60.079 63.158 0.00 0.00 0.00 3.51
6365 7034 1.743252 CGCCCTCTTCTTGGAGTGC 60.743 63.158 0.00 0.00 34.29 4.40
6366 7035 1.376466 GCCCTCTTCTTGGAGTGCA 59.624 57.895 0.00 0.00 36.86 4.57
6367 7036 0.250901 GCCCTCTTCTTGGAGTGCAA 60.251 55.000 0.00 0.00 36.86 4.08
6368 7037 1.818642 CCCTCTTCTTGGAGTGCAAG 58.181 55.000 17.64 17.64 0.00 4.01
6369 7038 1.612726 CCCTCTTCTTGGAGTGCAAGG 60.613 57.143 22.45 8.32 0.00 3.61
6370 7039 1.349026 CCTCTTCTTGGAGTGCAAGGA 59.651 52.381 22.45 14.51 0.00 3.36
6371 7040 2.614987 CCTCTTCTTGGAGTGCAAGGAG 60.615 54.545 23.29 23.29 36.78 3.69
6372 7041 1.349026 TCTTCTTGGAGTGCAAGGAGG 59.651 52.381 27.13 15.93 36.26 4.30
6373 7042 0.250901 TTCTTGGAGTGCAAGGAGGC 60.251 55.000 22.45 0.00 0.00 4.70
6374 7043 2.032528 TTGGAGTGCAAGGAGGCG 59.967 61.111 0.00 0.00 36.28 5.52
6375 7044 4.704833 TGGAGTGCAAGGAGGCGC 62.705 66.667 0.00 0.00 44.42 6.53
6379 7048 2.563427 GTGCAAGGAGGCGCTTTC 59.437 61.111 7.64 0.00 40.99 2.62
6380 7049 2.672996 TGCAAGGAGGCGCTTTCC 60.673 61.111 19.57 19.57 36.28 3.13
6381 7050 2.360475 GCAAGGAGGCGCTTTCCT 60.360 61.111 22.78 22.78 46.97 3.36
6386 7055 2.202810 GAGGCGCTTTCCTCCTCG 60.203 66.667 7.64 0.00 45.40 4.63
6387 7056 2.997897 AGGCGCTTTCCTCCTCGT 60.998 61.111 7.64 0.00 0.00 4.18
6388 7057 2.509561 GGCGCTTTCCTCCTCGTC 60.510 66.667 7.64 0.00 0.00 4.20
6389 7058 2.574399 GCGCTTTCCTCCTCGTCT 59.426 61.111 0.00 0.00 0.00 4.18
6390 7059 1.079750 GCGCTTTCCTCCTCGTCTT 60.080 57.895 0.00 0.00 0.00 3.01
6391 7060 1.079317 GCGCTTTCCTCCTCGTCTTC 61.079 60.000 0.00 0.00 0.00 2.87
6392 7061 0.798771 CGCTTTCCTCCTCGTCTTCG 60.799 60.000 0.00 0.00 38.55 3.79
6393 7062 0.244178 GCTTTCCTCCTCGTCTTCGT 59.756 55.000 0.00 0.00 38.33 3.85
6394 7063 1.733061 GCTTTCCTCCTCGTCTTCGTC 60.733 57.143 0.00 0.00 38.33 4.20
6395 7064 0.886563 TTTCCTCCTCGTCTTCGTCC 59.113 55.000 0.00 0.00 38.33 4.79
6396 7065 0.964358 TTCCTCCTCGTCTTCGTCCC 60.964 60.000 0.00 0.00 38.33 4.46
6397 7066 2.416432 CCTCCTCGTCTTCGTCCCC 61.416 68.421 0.00 0.00 38.33 4.81
6398 7067 2.749044 TCCTCGTCTTCGTCCCCG 60.749 66.667 0.00 0.00 38.33 5.73
6399 7068 3.060615 CCTCGTCTTCGTCCCCGT 61.061 66.667 0.00 0.00 38.33 5.28
6400 7069 2.484203 CTCGTCTTCGTCCCCGTC 59.516 66.667 0.00 0.00 38.33 4.79
6401 7070 3.048941 CTCGTCTTCGTCCCCGTCC 62.049 68.421 0.00 0.00 38.33 4.79
6402 7071 3.060615 CGTCTTCGTCCCCGTCCT 61.061 66.667 0.00 0.00 35.01 3.85
6403 7072 2.572284 GTCTTCGTCCCCGTCCTG 59.428 66.667 0.00 0.00 35.01 3.86
6404 7073 1.975407 GTCTTCGTCCCCGTCCTGA 60.975 63.158 0.00 0.00 35.01 3.86
6405 7074 1.677966 TCTTCGTCCCCGTCCTGAG 60.678 63.158 0.00 0.00 35.01 3.35
6406 7075 3.358076 CTTCGTCCCCGTCCTGAGC 62.358 68.421 0.00 0.00 35.01 4.26
6407 7076 4.671590 TCGTCCCCGTCCTGAGCA 62.672 66.667 0.00 0.00 35.01 4.26
6408 7077 4.135153 CGTCCCCGTCCTGAGCAG 62.135 72.222 0.00 0.00 0.00 4.24
6409 7078 2.680352 GTCCCCGTCCTGAGCAGA 60.680 66.667 0.00 0.00 0.00 4.26
6410 7079 2.680352 TCCCCGTCCTGAGCAGAC 60.680 66.667 0.00 0.00 0.00 3.51
6411 7080 4.135153 CCCCGTCCTGAGCAGACG 62.135 72.222 6.34 6.34 41.40 4.18
6414 7083 4.135153 CGTCCTGAGCAGACGGGG 62.135 72.222 5.44 0.00 38.50 5.73
6415 7084 4.459089 GTCCTGAGCAGACGGGGC 62.459 72.222 0.00 0.00 36.97 5.80
6416 7085 4.704103 TCCTGAGCAGACGGGGCT 62.704 66.667 0.00 0.00 46.07 5.19
6417 7086 4.463879 CCTGAGCAGACGGGGCTG 62.464 72.222 0.00 0.00 42.78 4.85
6423 7092 4.790962 CAGACGGGGCTGCAGCAT 62.791 66.667 37.63 20.97 44.36 3.79
6424 7093 4.479993 AGACGGGGCTGCAGCATC 62.480 66.667 37.63 27.70 44.36 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 7.039270 TGTACTTGCACACGATTATTCATACT 58.961 34.615 0.00 0.00 0.00 2.12
20 21 3.033368 TGCTGTACTTGCACACGATTA 57.967 42.857 9.44 0.00 35.31 1.75
25 26 1.532868 CTCCTTGCTGTACTTGCACAC 59.467 52.381 12.36 0.00 40.40 3.82
30 31 0.036732 TGGCCTCCTTGCTGTACTTG 59.963 55.000 3.32 0.00 0.00 3.16
36 37 1.098050 GTTATGTGGCCTCCTTGCTG 58.902 55.000 3.32 0.00 0.00 4.41
38 39 1.767759 ATGTTATGTGGCCTCCTTGC 58.232 50.000 3.32 0.00 0.00 4.01
39 40 3.091545 ACAATGTTATGTGGCCTCCTTG 58.908 45.455 3.32 0.00 30.82 3.61
53 54 5.719085 AGATACAGGAGAGAGACACAATGTT 59.281 40.000 0.00 0.00 0.00 2.71
60 61 6.007485 ACATACAGATACAGGAGAGAGACA 57.993 41.667 0.00 0.00 0.00 3.41
61 62 6.544197 TGAACATACAGATACAGGAGAGAGAC 59.456 42.308 0.00 0.00 0.00 3.36
62 63 6.663734 TGAACATACAGATACAGGAGAGAGA 58.336 40.000 0.00 0.00 0.00 3.10
63 64 6.951062 TGAACATACAGATACAGGAGAGAG 57.049 41.667 0.00 0.00 0.00 3.20
64 65 7.718334 TTTGAACATACAGATACAGGAGAGA 57.282 36.000 0.00 0.00 0.00 3.10
108 109 0.518636 CGACCTGTTTGGATGCACAG 59.481 55.000 0.00 0.00 40.23 3.66
130 131 9.846248 AAATATCAAATGACTCAAGTTGCTAAC 57.154 29.630 0.00 0.00 0.00 2.34
133 134 7.177216 TGGAAATATCAAATGACTCAAGTTGCT 59.823 33.333 0.00 0.00 0.00 3.91
171 172 1.178276 TGTTGTTTGCCCGACTGTTT 58.822 45.000 0.00 0.00 0.00 2.83
181 182 3.265791 TGGTTCCAATGTTGTTGTTTGC 58.734 40.909 0.00 0.00 0.00 3.68
202 203 7.306953 CGGAATTGAAATTTTGAAATTGCCAT 58.693 30.769 14.77 0.00 38.53 4.40
235 236 3.005155 AGAACTCAAGTGCAAATTCCAGC 59.995 43.478 0.00 0.00 0.00 4.85
275 277 3.365265 CCCTCCGCTTGGTTGCAC 61.365 66.667 0.00 0.00 0.00 4.57
422 428 1.081641 CAACAAGAAGCAGCGCTGG 60.082 57.895 36.47 21.74 39.62 4.85
442 485 2.729028 TAGATAACCTTGGCCTTGGC 57.271 50.000 3.32 2.49 0.00 4.52
575 636 0.179702 TGATCCTGTGCTCCTCATGC 59.820 55.000 0.00 0.00 0.00 4.06
630 691 1.129058 ATAATTTCCTCCCGGACGCT 58.871 50.000 0.73 0.00 39.60 5.07
680 749 0.319813 GAAGCGCTTGTGCCCATTTT 60.320 50.000 30.47 0.00 35.36 1.82
705 774 3.412624 GATGGGAGGAGCACTGGGC 62.413 68.421 0.00 0.00 45.30 5.36
706 775 1.277580 AAGATGGGAGGAGCACTGGG 61.278 60.000 0.00 0.00 0.00 4.45
707 776 0.622665 AAAGATGGGAGGAGCACTGG 59.377 55.000 0.00 0.00 0.00 4.00
708 777 1.407989 GGAAAGATGGGAGGAGCACTG 60.408 57.143 0.00 0.00 0.00 3.66
825 909 0.889186 CGGGGATTGAAATAGGCGGG 60.889 60.000 0.00 0.00 0.00 6.13
915 1016 3.391382 GGACGAGGGGTGGGAGTG 61.391 72.222 0.00 0.00 0.00 3.51
916 1017 4.716977 GGGACGAGGGGTGGGAGT 62.717 72.222 0.00 0.00 0.00 3.85
987 1119 2.430332 GTGGTCCATCCTCTCTTCTCTG 59.570 54.545 0.00 0.00 37.07 3.35
1214 1346 2.995574 ACTCGAGGGGTCGGTTGG 60.996 66.667 18.41 0.00 0.00 3.77
1216 1348 2.679287 GGACTCGAGGGGTCGGTT 60.679 66.667 18.41 0.00 34.82 4.44
1217 1349 4.755507 GGGACTCGAGGGGTCGGT 62.756 72.222 18.41 0.00 34.82 4.69
1219 1351 2.563013 TAAGGGGACTCGAGGGGTCG 62.563 65.000 18.41 0.00 42.68 4.79
1228 1360 2.168728 ACAAAGCGAGATAAGGGGACTC 59.831 50.000 0.00 0.00 42.68 3.36
1230 1362 2.693267 ACAAAGCGAGATAAGGGGAC 57.307 50.000 0.00 0.00 0.00 4.46
1300 1456 0.459934 CCAGCTTCTTCTGCTCCTCG 60.460 60.000 0.00 0.00 38.92 4.63
1372 1528 9.462606 TGAAGAGTCAGAAGAGTGTATATTACA 57.537 33.333 0.00 0.00 36.08 2.41
1607 1877 1.587613 GCAGAGTAAGAGGAGCGCG 60.588 63.158 0.00 0.00 0.00 6.86
1627 1898 1.107945 AGGTAGAAGCTCGGAGAAGC 58.892 55.000 9.69 0.00 34.09 3.86
1630 1901 1.819288 CAACAGGTAGAAGCTCGGAGA 59.181 52.381 9.69 0.00 0.00 3.71
1632 1903 1.544691 GTCAACAGGTAGAAGCTCGGA 59.455 52.381 0.00 0.00 0.00 4.55
1633 1904 1.546476 AGTCAACAGGTAGAAGCTCGG 59.454 52.381 0.00 0.00 0.00 4.63
1634 1905 2.600731 CAGTCAACAGGTAGAAGCTCG 58.399 52.381 0.00 0.00 0.00 5.03
1640 1913 3.305720 ACTGAACCAGTCAACAGGTAGA 58.694 45.455 0.00 0.00 41.21 2.59
1706 1981 2.266554 GCCGATCAGATAGCACATAGC 58.733 52.381 0.00 0.00 46.19 2.97
1707 1982 2.095008 ACGCCGATCAGATAGCACATAG 60.095 50.000 0.00 0.00 0.00 2.23
1708 1983 1.886542 ACGCCGATCAGATAGCACATA 59.113 47.619 0.00 0.00 0.00 2.29
1709 1984 0.676184 ACGCCGATCAGATAGCACAT 59.324 50.000 0.00 0.00 0.00 3.21
1710 1985 0.459899 AACGCCGATCAGATAGCACA 59.540 50.000 0.00 0.00 0.00 4.57
1711 1986 1.571919 AAACGCCGATCAGATAGCAC 58.428 50.000 0.00 0.00 0.00 4.40
1712 1987 2.201732 GAAAACGCCGATCAGATAGCA 58.798 47.619 0.00 0.00 0.00 3.49
1788 2063 3.535629 TTGCAGCACGTCCTCCAGG 62.536 63.158 0.00 0.00 0.00 4.45
1929 2211 1.165270 GCTGCGGTAAACCAGAACAT 58.835 50.000 0.00 0.00 35.14 2.71
1953 2235 1.156736 CACCGTTTCCAGTGCTTAGG 58.843 55.000 0.00 0.00 0.00 2.69
1954 2236 1.878953 ACACCGTTTCCAGTGCTTAG 58.121 50.000 0.00 0.00 37.51 2.18
1986 2268 1.832912 CCCGAGGGAAGGATCAAGG 59.167 63.158 0.84 0.00 37.50 3.61
2077 2359 8.801299 TGCAGGTCATCAGTGAATAAATTTTAA 58.199 29.630 0.00 0.00 35.80 1.52
2096 2378 2.463876 GCAGAACTTTTGTTGCAGGTC 58.536 47.619 0.00 0.00 43.66 3.85
2097 2379 1.136891 GGCAGAACTTTTGTTGCAGGT 59.863 47.619 0.00 0.00 43.66 4.00
2098 2380 1.136695 TGGCAGAACTTTTGTTGCAGG 59.863 47.619 0.00 0.00 43.66 4.85
2111 2393 6.663093 ACACATACAATAGGATTTTGGCAGAA 59.337 34.615 0.00 0.00 0.00 3.02
2113 2395 6.127647 ACACACATACAATAGGATTTTGGCAG 60.128 38.462 0.00 0.00 0.00 4.85
2114 2396 5.714333 ACACACATACAATAGGATTTTGGCA 59.286 36.000 0.00 0.00 0.00 4.92
2118 2400 9.077885 AGTTGAACACACATACAATAGGATTTT 57.922 29.630 0.00 0.00 0.00 1.82
2129 2411 6.844696 TCAAGAAGAGTTGAACACACATAC 57.155 37.500 0.00 0.00 33.41 2.39
2138 2420 5.125356 TCTGCACAATCAAGAAGAGTTGAA 58.875 37.500 0.00 0.00 39.84 2.69
2140 2422 5.624344 ATCTGCACAATCAAGAAGAGTTG 57.376 39.130 0.00 0.00 0.00 3.16
2152 2434 4.021192 CCCTTTGTTTGGTATCTGCACAAT 60.021 41.667 0.00 0.00 0.00 2.71
2226 2508 7.713734 AGTAAGTAGGAGTACATACTTTGCA 57.286 36.000 17.79 0.00 46.68 4.08
2241 2523 3.574354 ACGGAGGGAGTAGTAAGTAGG 57.426 52.381 0.00 0.00 0.00 3.18
2243 2525 3.266772 TGGAACGGAGGGAGTAGTAAGTA 59.733 47.826 0.00 0.00 0.00 2.24
2244 2526 2.042162 TGGAACGGAGGGAGTAGTAAGT 59.958 50.000 0.00 0.00 0.00 2.24
2247 2529 2.905415 TTGGAACGGAGGGAGTAGTA 57.095 50.000 0.00 0.00 0.00 1.82
2249 2531 3.629142 AATTTGGAACGGAGGGAGTAG 57.371 47.619 0.00 0.00 0.00 2.57
2250 2532 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
2251 2533 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
2252 2534 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
2255 2537 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2257 2539 2.030007 ACGACGAGTAATTTGGAACGGA 60.030 45.455 0.00 0.00 0.00 4.69
2258 2540 2.091588 CACGACGAGTAATTTGGAACGG 59.908 50.000 0.00 0.00 0.00 4.44
2259 2541 2.091588 CCACGACGAGTAATTTGGAACG 59.908 50.000 0.00 0.00 0.00 3.95
2260 2542 3.062042 ACCACGACGAGTAATTTGGAAC 58.938 45.455 0.00 0.00 0.00 3.62
2261 2543 3.389925 ACCACGACGAGTAATTTGGAA 57.610 42.857 0.00 0.00 0.00 3.53
2262 2544 3.389925 AACCACGACGAGTAATTTGGA 57.610 42.857 0.00 0.00 0.00 3.53
2263 2545 4.477302 AAAACCACGACGAGTAATTTGG 57.523 40.909 0.00 0.00 0.00 3.28
2264 2546 6.219302 ACTAAAACCACGACGAGTAATTTG 57.781 37.500 0.00 2.39 0.00 2.32
2265 2547 6.849588 AACTAAAACCACGACGAGTAATTT 57.150 33.333 0.00 0.34 0.00 1.82
2266 2548 6.849588 AAACTAAAACCACGACGAGTAATT 57.150 33.333 0.00 1.08 0.00 1.40
2268 2550 7.276658 TGTTTAAACTAAAACCACGACGAGTAA 59.723 33.333 18.72 0.00 38.35 2.24
2269 2551 6.754209 TGTTTAAACTAAAACCACGACGAGTA 59.246 34.615 18.72 0.00 38.35 2.59
2270 2552 5.580297 TGTTTAAACTAAAACCACGACGAGT 59.420 36.000 18.72 0.00 38.35 4.18
2271 2553 6.035070 TGTTTAAACTAAAACCACGACGAG 57.965 37.500 18.72 0.00 38.35 4.18
2272 2554 6.257411 TGATGTTTAAACTAAAACCACGACGA 59.743 34.615 18.72 0.00 38.35 4.20
2273 2555 6.355144 GTGATGTTTAAACTAAAACCACGACG 59.645 38.462 18.72 0.00 38.35 5.12
2274 2556 7.188157 TGTGATGTTTAAACTAAAACCACGAC 58.812 34.615 18.72 3.13 38.35 4.34
2275 2557 7.317842 TGTGATGTTTAAACTAAAACCACGA 57.682 32.000 18.72 0.00 38.35 4.35
2276 2558 7.858382 TCATGTGATGTTTAAACTAAAACCACG 59.142 33.333 18.72 2.42 38.35 4.94
2277 2559 9.522804 TTCATGTGATGTTTAAACTAAAACCAC 57.477 29.630 18.72 15.28 38.35 4.16
2278 2560 9.743057 CTTCATGTGATGTTTAAACTAAAACCA 57.257 29.630 18.72 8.65 38.35 3.67
2279 2561 9.744468 ACTTCATGTGATGTTTAAACTAAAACC 57.256 29.630 18.72 3.75 38.35 3.27
2284 2566 8.289618 GCTTGACTTCATGTGATGTTTAAACTA 58.710 33.333 18.72 6.44 33.32 2.24
2285 2567 7.013655 AGCTTGACTTCATGTGATGTTTAAACT 59.986 33.333 18.72 5.10 33.32 2.66
2286 2568 7.113965 CAGCTTGACTTCATGTGATGTTTAAAC 59.886 37.037 11.54 11.54 33.32 2.01
2287 2569 7.013178 TCAGCTTGACTTCATGTGATGTTTAAA 59.987 33.333 3.47 0.00 33.32 1.52
2288 2570 6.486320 TCAGCTTGACTTCATGTGATGTTTAA 59.514 34.615 3.47 2.78 33.32 1.52
2289 2571 5.997129 TCAGCTTGACTTCATGTGATGTTTA 59.003 36.000 3.47 0.00 33.32 2.01
2300 2582 4.321718 CCAGAGAATTCAGCTTGACTTCA 58.678 43.478 8.44 0.00 38.17 3.02
2320 2610 1.240641 CGTACCTGCAATGTTGGCCA 61.241 55.000 0.00 0.00 0.00 5.36
2321 2611 1.506262 CGTACCTGCAATGTTGGCC 59.494 57.895 0.00 0.00 0.00 5.36
2340 2630 2.290514 TGGGGAAACTTGCATCTCTCTG 60.291 50.000 0.00 0.00 0.00 3.35
2395 2685 1.374758 GGCACTCACTCACCTTCCG 60.375 63.158 0.00 0.00 0.00 4.30
2401 2691 2.139118 GAAAGACAGGCACTCACTCAC 58.861 52.381 0.00 0.00 34.60 3.51
2402 2692 1.762370 TGAAAGACAGGCACTCACTCA 59.238 47.619 0.00 0.00 34.60 3.41
2403 2693 2.411904 CTGAAAGACAGGCACTCACTC 58.588 52.381 0.00 0.00 42.39 3.51
2404 2694 1.542108 GCTGAAAGACAGGCACTCACT 60.542 52.381 0.00 0.00 45.82 3.41
2414 2704 4.122776 GTGAGAGAAACAGCTGAAAGACA 58.877 43.478 23.35 8.52 34.07 3.41
2434 2724 5.049060 TGTGGAATAGTTTCGGTTTGATGTG 60.049 40.000 0.00 0.00 32.28 3.21
2451 2742 2.489329 CGGACTGAATTTGCTGTGGAAT 59.511 45.455 0.00 0.00 0.00 3.01
2461 2752 1.067071 GGTCGGAGTCGGACTGAATTT 60.067 52.381 24.82 0.00 36.95 1.82
2481 2772 1.667212 GTTCGGTATAAAACAGGGGCG 59.333 52.381 0.00 0.00 0.00 6.13
2493 2785 7.556275 ACATGACAAAATCATTAGGTTCGGTAT 59.444 33.333 0.00 0.00 46.54 2.73
2497 2789 9.787532 AATAACATGACAAAATCATTAGGTTCG 57.212 29.630 0.00 0.00 46.54 3.95
2546 2845 1.139058 AGCAGGGTACGATGAACATCC 59.861 52.381 8.87 0.00 34.40 3.51
2611 2910 2.733671 GCGTACCGAACCTTTCCGC 61.734 63.158 0.00 0.00 31.62 5.54
2685 2988 0.606401 ACCAACCTCAGGAATGCACG 60.606 55.000 0.00 0.00 0.00 5.34
2700 3003 2.282110 CACGCCCCATGTCACCAA 60.282 61.111 0.00 0.00 0.00 3.67
2773 3076 4.617959 CATTTGAGGCTGATTTGCATAGG 58.382 43.478 0.00 0.00 34.04 2.57
2816 3120 0.259647 TAAGAGGGCATGCAGGCAAT 59.740 50.000 26.25 12.77 46.44 3.56
2843 3163 4.643387 GGCAGTGTGGTTCGGCCT 62.643 66.667 0.00 0.00 41.54 5.19
2847 3168 2.111043 ACCAGGCAGTGTGGTTCG 59.889 61.111 0.00 0.00 46.73 3.95
2898 3222 1.333177 TACAACCAAACACCATGCCC 58.667 50.000 0.00 0.00 0.00 5.36
3002 3336 7.331026 TGCTAGTTGATGCTCTGTTTATACTT 58.669 34.615 0.00 0.00 0.00 2.24
3093 3435 2.674852 TCGAGCGTACTATCGAGTTTGT 59.325 45.455 13.34 0.00 42.61 2.83
3167 3510 0.249868 TTGAGGTCGTCAGCAAGTGG 60.250 55.000 0.00 0.00 36.21 4.00
3341 3686 3.241530 AACACCGGCTGCTCCTGA 61.242 61.111 0.00 0.00 0.00 3.86
3753 4161 1.152139 GAGGGGATGGAGAGGAGGG 60.152 68.421 0.00 0.00 0.00 4.30
3796 4204 1.069775 GAGAGGGGGTGGGTAAACAA 58.930 55.000 0.00 0.00 0.00 2.83
3969 4378 1.134670 GCATGGAGCCTAAGTTCGAGT 60.135 52.381 0.00 0.00 37.23 4.18
4609 5043 2.225727 TCGATCCACGGTGATAGATTCG 59.774 50.000 10.28 8.47 42.82 3.34
4619 5053 0.311165 CGCTAGATTCGATCCACGGT 59.689 55.000 0.00 0.00 42.82 4.83
5045 5549 3.594603 AATCCTCGTACAGAACACTGG 57.405 47.619 0.00 0.00 36.12 4.00
5063 5567 1.633432 TCAGGAACGACATGGGGAAAT 59.367 47.619 0.00 0.00 0.00 2.17
5175 5679 2.223340 CGAAGTGGCATGGTATCAAAGC 60.223 50.000 0.00 0.00 0.00 3.51
5254 5758 0.730494 GCACGCCAAAGATCAGCAAC 60.730 55.000 0.00 0.00 0.00 4.17
5286 5790 2.050985 GCAAACGCAGCAGACCAC 60.051 61.111 0.00 0.00 0.00 4.16
5291 5795 1.609932 CTACAATGCAAACGCAGCAG 58.390 50.000 0.00 0.00 46.36 4.24
5308 5812 3.825908 AGGAACAATTTCAAGGGCCTA 57.174 42.857 6.41 0.00 32.80 3.93
5395 5899 1.469251 GCTCGACTCCGAAGCATACAA 60.469 52.381 0.00 0.00 45.04 2.41
5400 5904 2.258591 GTGCTCGACTCCGAAGCA 59.741 61.111 0.00 0.00 45.04 3.91
5432 5936 5.227569 ACATGTGTATTGTGTCTTCAGGA 57.772 39.130 0.00 0.00 0.00 3.86
5445 5949 2.092968 ACGGGATGCAGAACATGTGTAT 60.093 45.455 0.00 0.00 39.84 2.29
5486 6011 0.803117 TTTTGTCACAACGCCGAACA 59.197 45.000 0.00 0.00 0.00 3.18
5487 6012 1.202098 ACTTTTGTCACAACGCCGAAC 60.202 47.619 0.00 0.00 0.00 3.95
5488 6013 1.088306 ACTTTTGTCACAACGCCGAA 58.912 45.000 0.00 0.00 0.00 4.30
5489 6014 2.770134 ACTTTTGTCACAACGCCGA 58.230 47.368 0.00 0.00 0.00 5.54
5500 6025 1.142262 ACGCTACCCAAGGACTTTTGT 59.858 47.619 0.00 0.00 0.00 2.83
5501 6026 1.892209 ACGCTACCCAAGGACTTTTG 58.108 50.000 0.00 0.00 0.00 2.44
5502 6027 2.651382 AACGCTACCCAAGGACTTTT 57.349 45.000 0.00 0.00 0.00 2.27
5503 6028 3.606687 CATAACGCTACCCAAGGACTTT 58.393 45.455 0.00 0.00 0.00 2.66
5506 6031 1.208776 ACCATAACGCTACCCAAGGAC 59.791 52.381 0.00 0.00 0.00 3.85
5512 6037 3.131396 CAGAATCACCATAACGCTACCC 58.869 50.000 0.00 0.00 0.00 3.69
5518 6043 6.037500 ACAATCATGTCAGAATCACCATAACG 59.962 38.462 0.00 0.00 33.41 3.18
5538 6065 4.398988 TGTTACATTGAGGCCATGACAATC 59.601 41.667 5.01 0.00 32.92 2.67
5580 6107 8.422566 GCTCTTATATTAGTTTACAGTGGGAGT 58.577 37.037 0.00 0.00 0.00 3.85
5581 6108 7.595502 CGCTCTTATATTAGTTTACAGTGGGAG 59.404 40.741 0.00 0.00 0.00 4.30
5582 6109 7.069085 ACGCTCTTATATTAGTTTACAGTGGGA 59.931 37.037 0.00 0.00 0.00 4.37
5583 6110 7.208080 ACGCTCTTATATTAGTTTACAGTGGG 58.792 38.462 0.00 0.00 0.00 4.61
5584 6111 8.644318 AACGCTCTTATATTAGTTTACAGTGG 57.356 34.615 0.00 0.00 0.00 4.00
5592 6119 9.601217 AGTGATCAAAACGCTCTTATATTAGTT 57.399 29.630 0.00 0.00 0.00 2.24
5597 6124 9.601217 ACTTTAGTGATCAAAACGCTCTTATAT 57.399 29.630 0.00 0.00 0.00 0.86
5598 6125 8.997621 ACTTTAGTGATCAAAACGCTCTTATA 57.002 30.769 0.00 0.00 0.00 0.98
5599 6126 7.907214 ACTTTAGTGATCAAAACGCTCTTAT 57.093 32.000 0.00 0.00 0.00 1.73
5600 6127 8.086522 ACTACTTTAGTGATCAAAACGCTCTTA 58.913 33.333 0.00 0.00 37.69 2.10
5601 6128 6.929606 ACTACTTTAGTGATCAAAACGCTCTT 59.070 34.615 0.00 0.00 37.69 2.85
5602 6129 6.456501 ACTACTTTAGTGATCAAAACGCTCT 58.543 36.000 0.00 0.00 37.69 4.09
5603 6130 6.707599 ACTACTTTAGTGATCAAAACGCTC 57.292 37.500 0.00 0.00 37.69 5.03
5616 6143 8.828688 AAAAGCGTTTAGATCACTACTTTAGT 57.171 30.769 0.00 0.00 40.28 2.24
5632 6159 8.606602 CCTCCGTAAACTAATATAAAAGCGTTT 58.393 33.333 2.53 2.53 0.00 3.60
5633 6160 7.225341 CCCTCCGTAAACTAATATAAAAGCGTT 59.775 37.037 0.00 0.00 0.00 4.84
5634 6161 6.703165 CCCTCCGTAAACTAATATAAAAGCGT 59.297 38.462 0.00 0.00 0.00 5.07
5635 6162 6.925165 TCCCTCCGTAAACTAATATAAAAGCG 59.075 38.462 0.00 0.00 0.00 4.68
5636 6163 7.930325 ACTCCCTCCGTAAACTAATATAAAAGC 59.070 37.037 0.00 0.00 0.00 3.51
5642 6169 9.151177 TCAAATACTCCCTCCGTAAACTAATAT 57.849 33.333 0.00 0.00 0.00 1.28
5643 6170 8.416329 GTCAAATACTCCCTCCGTAAACTAATA 58.584 37.037 0.00 0.00 0.00 0.98
5644 6171 7.093201 TGTCAAATACTCCCTCCGTAAACTAAT 60.093 37.037 0.00 0.00 0.00 1.73
5645 6172 6.211184 TGTCAAATACTCCCTCCGTAAACTAA 59.789 38.462 0.00 0.00 0.00 2.24
5646 6173 5.716228 TGTCAAATACTCCCTCCGTAAACTA 59.284 40.000 0.00 0.00 0.00 2.24
5647 6174 4.529377 TGTCAAATACTCCCTCCGTAAACT 59.471 41.667 0.00 0.00 0.00 2.66
5648 6175 4.824289 TGTCAAATACTCCCTCCGTAAAC 58.176 43.478 0.00 0.00 0.00 2.01
5649 6176 5.687166 ATGTCAAATACTCCCTCCGTAAA 57.313 39.130 0.00 0.00 0.00 2.01
5650 6177 6.989155 ATATGTCAAATACTCCCTCCGTAA 57.011 37.500 0.00 0.00 0.00 3.18
5651 6178 6.740401 GCAATATGTCAAATACTCCCTCCGTA 60.740 42.308 0.00 0.00 0.00 4.02
5652 6179 5.611374 CAATATGTCAAATACTCCCTCCGT 58.389 41.667 0.00 0.00 0.00 4.69
5653 6180 4.452455 GCAATATGTCAAATACTCCCTCCG 59.548 45.833 0.00 0.00 0.00 4.63
5654 6181 5.239525 GTGCAATATGTCAAATACTCCCTCC 59.760 44.000 0.00 0.00 0.00 4.30
5655 6182 5.050091 CGTGCAATATGTCAAATACTCCCTC 60.050 44.000 0.00 0.00 0.00 4.30
5656 6183 4.816385 CGTGCAATATGTCAAATACTCCCT 59.184 41.667 0.00 0.00 0.00 4.20
5657 6184 4.574828 ACGTGCAATATGTCAAATACTCCC 59.425 41.667 0.00 0.00 0.00 4.30
5658 6185 5.734855 ACGTGCAATATGTCAAATACTCC 57.265 39.130 0.00 0.00 0.00 3.85
5815 6480 0.036388 GAACACCTCCAATCAGGCGA 60.036 55.000 0.00 0.00 36.98 5.54
5822 6487 1.736645 CGCGACGAACACCTCCAAT 60.737 57.895 0.00 0.00 0.00 3.16
5948 6615 1.338136 CCCTAGCGAATGTGGGAGGT 61.338 60.000 0.00 0.00 42.11 3.85
6037 6705 3.869473 CTTTCCCGCCCGAACACGA 62.869 63.158 0.00 0.00 0.00 4.35
6167 6836 4.373116 GGTCACCTCGGCGAGCAA 62.373 66.667 30.55 14.96 0.00 3.91
6174 6843 2.462456 CCATATCATGGTCACCTCGG 57.538 55.000 0.00 0.00 45.54 4.63
6186 6855 1.210234 CTGGTGACACAGCCCATATCA 59.790 52.381 8.08 0.00 35.60 2.15
6188 6857 1.210478 GTCTGGTGACACAGCCCATAT 59.790 52.381 8.08 0.00 42.48 1.78
6189 6858 0.613260 GTCTGGTGACACAGCCCATA 59.387 55.000 8.08 0.00 42.48 2.74
6190 6859 1.376466 GTCTGGTGACACAGCCCAT 59.624 57.895 8.08 0.00 42.48 4.00
6213 6882 5.632034 ATAGTCCCTTACAAATGGAGACC 57.368 43.478 0.00 0.00 0.00 3.85
6242 6911 5.055812 TCCTTGGCTGTTTTAATTGCTTTG 58.944 37.500 0.00 0.00 0.00 2.77
6277 6946 0.462047 GTGTCGGCCTAAGGTGATGG 60.462 60.000 0.00 0.00 0.00 3.51
6278 6947 0.537188 AGTGTCGGCCTAAGGTGATG 59.463 55.000 0.00 0.00 0.00 3.07
6279 6948 0.537188 CAGTGTCGGCCTAAGGTGAT 59.463 55.000 0.00 0.00 0.00 3.06
6280 6949 1.972198 CAGTGTCGGCCTAAGGTGA 59.028 57.895 0.00 0.00 0.00 4.02
6281 6950 1.741770 GCAGTGTCGGCCTAAGGTG 60.742 63.158 0.00 0.00 0.00 4.00
6282 6951 2.663196 GCAGTGTCGGCCTAAGGT 59.337 61.111 0.00 0.00 0.00 3.50
6289 6958 2.811317 CGAAGAGGCAGTGTCGGC 60.811 66.667 0.00 0.00 0.00 5.54
6290 6959 2.125912 CCGAAGAGGCAGTGTCGG 60.126 66.667 4.90 4.90 46.23 4.79
6291 6960 2.125912 CCCGAAGAGGCAGTGTCG 60.126 66.667 0.00 0.00 39.21 4.35
6292 6961 2.266055 CCCCGAAGAGGCAGTGTC 59.734 66.667 0.00 0.00 39.21 3.67
6299 6968 3.474570 CCTCAGGCCCCGAAGAGG 61.475 72.222 0.00 5.20 41.43 3.69
6300 6969 3.474570 CCCTCAGGCCCCGAAGAG 61.475 72.222 0.00 0.00 0.00 2.85
6307 6976 2.612746 TACAACCCCCTCAGGCCC 60.613 66.667 0.00 0.00 0.00 5.80
6308 6977 2.675371 GTACAACCCCCTCAGGCC 59.325 66.667 0.00 0.00 0.00 5.19
6309 6978 2.675371 GGTACAACCCCCTCAGGC 59.325 66.667 0.00 0.00 30.04 4.85
6310 6979 2.987125 CGGTACAACCCCCTCAGG 59.013 66.667 0.00 0.00 33.75 3.86
6311 6980 1.910580 ATGCGGTACAACCCCCTCAG 61.911 60.000 0.00 0.00 33.75 3.35
6312 6981 1.906105 GATGCGGTACAACCCCCTCA 61.906 60.000 0.00 0.00 33.75 3.86
6313 6982 1.153229 GATGCGGTACAACCCCCTC 60.153 63.158 0.00 0.00 33.75 4.30
6314 6983 2.995547 GATGCGGTACAACCCCCT 59.004 61.111 0.00 0.00 33.75 4.79
6315 6984 2.512974 CGATGCGGTACAACCCCC 60.513 66.667 0.00 0.00 33.75 5.40
6316 6985 1.812507 GTCGATGCGGTACAACCCC 60.813 63.158 0.00 0.00 33.75 4.95
6317 6986 2.162754 CGTCGATGCGGTACAACCC 61.163 63.158 0.00 0.00 33.75 4.11
6318 6987 1.408474 GACGTCGATGCGGTACAACC 61.408 60.000 4.06 0.00 35.98 3.77
6319 6988 0.455633 AGACGTCGATGCGGTACAAC 60.456 55.000 10.46 0.00 35.98 3.32
6320 6989 0.241749 AAGACGTCGATGCGGTACAA 59.758 50.000 10.46 0.00 35.98 2.41
6321 6990 0.179181 GAAGACGTCGATGCGGTACA 60.179 55.000 10.46 0.00 35.98 2.90
6322 6991 2.563614 GAAGACGTCGATGCGGTAC 58.436 57.895 10.46 0.00 35.98 3.34
6344 7013 4.082523 TCCAAGAAGAGGGCGGCG 62.083 66.667 0.51 0.51 0.00 6.46
6345 7014 2.124942 CTCCAAGAAGAGGGCGGC 60.125 66.667 0.00 0.00 0.00 6.53
6346 7015 1.078848 CACTCCAAGAAGAGGGCGG 60.079 63.158 0.00 0.00 38.26 6.13
6347 7016 4.606071 CACTCCAAGAAGAGGGCG 57.394 61.111 0.00 0.00 38.26 6.13
6357 7026 2.032528 CGCCTCCTTGCACTCCAA 59.967 61.111 0.00 0.00 0.00 3.53
6358 7027 4.704833 GCGCCTCCTTGCACTCCA 62.705 66.667 0.00 0.00 0.00 3.86
6359 7028 3.909086 AAGCGCCTCCTTGCACTCC 62.909 63.158 2.29 0.00 0.00 3.85
6360 7029 1.916697 GAAAGCGCCTCCTTGCACTC 61.917 60.000 2.29 0.00 0.00 3.51
6361 7030 1.968540 GAAAGCGCCTCCTTGCACT 60.969 57.895 2.29 0.00 0.00 4.40
6362 7031 2.563427 GAAAGCGCCTCCTTGCAC 59.437 61.111 2.29 0.00 0.00 4.57
6363 7032 2.672996 GGAAAGCGCCTCCTTGCA 60.673 61.111 16.93 0.00 0.00 4.08
6364 7033 2.360475 AGGAAAGCGCCTCCTTGC 60.360 61.111 20.28 7.54 40.61 4.01
6370 7039 2.997897 ACGAGGAGGAAAGCGCCT 60.998 61.111 2.29 0.00 42.17 5.52
6371 7040 2.508586 AAGACGAGGAGGAAAGCGCC 62.509 60.000 2.29 0.00 0.00 6.53
6372 7041 1.079317 GAAGACGAGGAGGAAAGCGC 61.079 60.000 0.00 0.00 0.00 5.92
6373 7042 0.798771 CGAAGACGAGGAGGAAAGCG 60.799 60.000 0.00 0.00 42.66 4.68
6374 7043 0.244178 ACGAAGACGAGGAGGAAAGC 59.756 55.000 0.00 0.00 42.66 3.51
6375 7044 1.135344 GGACGAAGACGAGGAGGAAAG 60.135 57.143 0.00 0.00 42.66 2.62
6376 7045 0.886563 GGACGAAGACGAGGAGGAAA 59.113 55.000 0.00 0.00 42.66 3.13
6377 7046 0.964358 GGGACGAAGACGAGGAGGAA 60.964 60.000 0.00 0.00 42.66 3.36
6378 7047 1.378250 GGGACGAAGACGAGGAGGA 60.378 63.158 0.00 0.00 42.66 3.71
6379 7048 2.416432 GGGGACGAAGACGAGGAGG 61.416 68.421 0.00 0.00 42.66 4.30
6380 7049 3.198582 GGGGACGAAGACGAGGAG 58.801 66.667 0.00 0.00 42.66 3.69
6392 7061 2.680352 TCTGCTCAGGACGGGGAC 60.680 66.667 0.00 0.00 0.00 4.46
6393 7062 2.680352 GTCTGCTCAGGACGGGGA 60.680 66.667 0.00 0.00 0.00 4.81
6398 7067 4.459089 GCCCCGTCTGCTCAGGAC 62.459 72.222 0.00 0.00 0.00 3.85
6399 7068 4.704103 AGCCCCGTCTGCTCAGGA 62.704 66.667 0.00 0.00 32.41 3.86
6400 7069 4.463879 CAGCCCCGTCTGCTCAGG 62.464 72.222 0.00 0.00 36.81 3.86
6406 7075 4.790962 ATGCTGCAGCCCCGTCTG 62.791 66.667 34.64 0.00 41.18 3.51
6407 7076 4.479993 GATGCTGCAGCCCCGTCT 62.480 66.667 34.64 12.89 41.18 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.