Multiple sequence alignment - TraesCS1D01G267300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G267300 chr1D 100.000 3845 0 0 1 3845 363252616 363248772 0.000000e+00 7101.0
1 TraesCS1D01G267300 chr1D 88.793 580 56 8 1 574 19931339 19930763 0.000000e+00 702.0
2 TraesCS1D01G267300 chr1D 90.529 359 30 3 3488 3845 462935647 462936002 4.500000e-129 472.0
3 TraesCS1D01G267300 chr1D 90.000 360 34 2 3488 3845 201774944 201774585 7.520000e-127 464.0
4 TraesCS1D01G267300 chr1B 91.128 2198 118 44 1322 3481 486490076 486487918 0.000000e+00 2907.0
5 TraesCS1D01G267300 chr1B 94.484 562 22 3 747 1308 486490680 486490128 0.000000e+00 857.0
6 TraesCS1D01G267300 chr1A 92.935 1741 80 29 1329 3048 462401479 462399761 0.000000e+00 2494.0
7 TraesCS1D01G267300 chr1A 92.116 723 39 10 616 1323 462402251 462401532 0.000000e+00 1003.0
8 TraesCS1D01G267300 chr1A 90.000 360 34 2 3488 3845 62797924 62797565 7.520000e-127 464.0
9 TraesCS1D01G267300 chr1A 80.769 182 14 7 3074 3237 462399475 462399297 5.220000e-24 122.0
10 TraesCS1D01G267300 chr1A 93.220 59 1 2 3034 3092 462399541 462399486 2.460000e-12 84.2
11 TraesCS1D01G267300 chr5D 90.000 580 46 6 1 574 546451461 546452034 0.000000e+00 739.0
12 TraesCS1D01G267300 chr5D 91.111 360 29 3 3488 3845 188816195 188816553 5.780000e-133 484.0
13 TraesCS1D01G267300 chr7B 88.348 575 61 6 2 574 9765051 9764481 0.000000e+00 686.0
14 TraesCS1D01G267300 chr6D 87.905 587 56 11 1 574 36736810 36737394 0.000000e+00 676.0
15 TraesCS1D01G267300 chr6D 87.521 585 58 12 1 574 454349073 454349653 0.000000e+00 662.0
16 TraesCS1D01G267300 chr2D 87.822 583 58 11 1 574 20764322 20764900 0.000000e+00 671.0
17 TraesCS1D01G267300 chr2D 90.278 360 33 2 3488 3845 625091270 625090911 1.620000e-128 470.0
18 TraesCS1D01G267300 chr2D 89.431 369 33 4 3481 3845 556342645 556343011 9.730000e-126 460.0
19 TraesCS1D01G267300 chr3D 87.713 586 55 13 1 574 522397369 522396789 0.000000e+00 667.0
20 TraesCS1D01G267300 chr3D 87.352 253 26 2 1742 1988 496786846 496787098 6.290000e-73 285.0
21 TraesCS1D01G267300 chr3D 83.770 191 26 5 1535 1721 496786524 496786713 3.950000e-40 176.0
22 TraesCS1D01G267300 chr7A 87.415 588 58 12 1 575 29313982 29314566 0.000000e+00 662.0
23 TraesCS1D01G267300 chr5B 87.370 578 67 6 1 576 605534746 605534173 0.000000e+00 658.0
24 TraesCS1D01G267300 chr4B 90.278 360 33 2 3488 3845 573998396 573998755 1.620000e-128 470.0
25 TraesCS1D01G267300 chr6B 90.028 361 33 3 3487 3845 54151821 54152180 7.520000e-127 464.0
26 TraesCS1D01G267300 chr2B 89.589 365 35 3 3483 3845 335623443 335623806 9.730000e-126 460.0
27 TraesCS1D01G267300 chr3B 86.131 274 28 8 1724 1988 656290894 656291166 1.750000e-73 287.0
28 TraesCS1D01G267300 chr3B 85.340 191 23 5 1535 1721 656290591 656290780 3.920000e-45 193.0
29 TraesCS1D01G267300 chr3A 86.719 256 25 7 1742 1988 638028871 638029126 3.780000e-70 276.0
30 TraesCS1D01G267300 chr3A 84.574 188 24 3 1535 1721 638028583 638028766 8.490000e-42 182.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G267300 chr1D 363248772 363252616 3844 True 7101.0 7101 100.0000 1 3845 1 chr1D.!!$R3 3844
1 TraesCS1D01G267300 chr1D 19930763 19931339 576 True 702.0 702 88.7930 1 574 1 chr1D.!!$R1 573
2 TraesCS1D01G267300 chr1B 486487918 486490680 2762 True 1882.0 2907 92.8060 747 3481 2 chr1B.!!$R1 2734
3 TraesCS1D01G267300 chr1A 462399297 462402251 2954 True 925.8 2494 89.7600 616 3237 4 chr1A.!!$R2 2621
4 TraesCS1D01G267300 chr5D 546451461 546452034 573 False 739.0 739 90.0000 1 574 1 chr5D.!!$F2 573
5 TraesCS1D01G267300 chr7B 9764481 9765051 570 True 686.0 686 88.3480 2 574 1 chr7B.!!$R1 572
6 TraesCS1D01G267300 chr6D 36736810 36737394 584 False 676.0 676 87.9050 1 574 1 chr6D.!!$F1 573
7 TraesCS1D01G267300 chr6D 454349073 454349653 580 False 662.0 662 87.5210 1 574 1 chr6D.!!$F2 573
8 TraesCS1D01G267300 chr2D 20764322 20764900 578 False 671.0 671 87.8220 1 574 1 chr2D.!!$F1 573
9 TraesCS1D01G267300 chr3D 522396789 522397369 580 True 667.0 667 87.7130 1 574 1 chr3D.!!$R1 573
10 TraesCS1D01G267300 chr3D 496786524 496787098 574 False 230.5 285 85.5610 1535 1988 2 chr3D.!!$F1 453
11 TraesCS1D01G267300 chr7A 29313982 29314566 584 False 662.0 662 87.4150 1 575 1 chr7A.!!$F1 574
12 TraesCS1D01G267300 chr5B 605534173 605534746 573 True 658.0 658 87.3700 1 576 1 chr5B.!!$R1 575
13 TraesCS1D01G267300 chr3B 656290591 656291166 575 False 240.0 287 85.7355 1535 1988 2 chr3B.!!$F1 453
14 TraesCS1D01G267300 chr3A 638028583 638029126 543 False 229.0 276 85.6465 1535 1988 2 chr3A.!!$F1 453

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
660 681 0.107508 ACCAGCGGATCATTCACAGG 60.108 55.0 0.00 0.0 0.00 4.0 F
1327 1364 0.166597 CTACCGTTCGAGCACGTACA 59.833 55.0 13.03 0.0 39.17 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2228 2491 0.035881 CCATGGCCATAGCGACAGAT 59.964 55.0 20.3 0.0 41.24 2.90 R
3151 3684 0.250124 ATTCGTCCACGGCAGTTTGA 60.250 50.0 0.0 0.0 40.29 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
99 100 4.131596 GGACCGCTAAACCTATGCAAATA 58.868 43.478 0.00 0.00 0.00 1.40
104 105 4.451096 CGCTAAACCTATGCAAATATCGGT 59.549 41.667 0.00 0.00 0.00 4.69
105 106 5.389516 CGCTAAACCTATGCAAATATCGGTC 60.390 44.000 0.00 0.00 0.00 4.79
240 241 1.595382 CCTCGCCGGCCAGAATAAG 60.595 63.158 23.78 4.84 0.00 1.73
293 307 2.941210 GGCAACTCATTTGTCCCGA 58.059 52.632 0.00 0.00 37.54 5.14
309 323 1.079127 CGATTCGTGGCTGGAACCT 60.079 57.895 0.00 0.00 0.00 3.50
317 331 1.282157 GTGGCTGGAACCTGGACTAAT 59.718 52.381 0.00 0.00 0.00 1.73
322 337 0.919710 GGAACCTGGACTAATGGCCT 59.080 55.000 3.32 0.00 0.00 5.19
357 374 3.998672 GAGCCACGAACCGGGACA 61.999 66.667 6.32 0.00 28.17 4.02
370 387 1.340600 CCGGGACAAATGTATGTGGGT 60.341 52.381 0.00 0.00 32.57 4.51
374 391 4.624364 CGGGACAAATGTATGTGGGTTAGA 60.624 45.833 0.00 0.00 32.57 2.10
395 412 2.807107 CGAGGCCCATTGATCCCGA 61.807 63.158 0.00 0.00 0.00 5.14
403 420 1.586422 CATTGATCCCGATTCGTGCT 58.414 50.000 5.20 0.00 0.00 4.40
453 470 2.668632 GGACCAATGCCCACGAGA 59.331 61.111 0.00 0.00 0.00 4.04
507 528 2.005840 TATGCACTCCATGGGCCCA 61.006 57.895 30.92 30.92 46.54 5.36
555 576 1.529713 GGCCAGACCCGAACCAAAA 60.530 57.895 0.00 0.00 0.00 2.44
576 597 7.881232 CCAAAACCCTATTTTCTACTAGTGACA 59.119 37.037 5.39 0.00 0.00 3.58
577 598 8.936864 CAAAACCCTATTTTCTACTAGTGACAG 58.063 37.037 5.39 0.00 0.00 3.51
578 599 6.793505 ACCCTATTTTCTACTAGTGACAGG 57.206 41.667 5.39 2.52 0.00 4.00
579 600 6.262207 ACCCTATTTTCTACTAGTGACAGGT 58.738 40.000 5.39 0.00 0.00 4.00
580 601 6.154706 ACCCTATTTTCTACTAGTGACAGGTG 59.845 42.308 5.39 0.64 0.00 4.00
581 602 6.380274 CCCTATTTTCTACTAGTGACAGGTGA 59.620 42.308 5.39 0.00 0.00 4.02
582 603 7.093465 CCCTATTTTCTACTAGTGACAGGTGAA 60.093 40.741 5.39 0.00 0.00 3.18
583 604 8.478877 CCTATTTTCTACTAGTGACAGGTGAAT 58.521 37.037 5.39 0.50 0.00 2.57
584 605 9.522804 CTATTTTCTACTAGTGACAGGTGAATC 57.477 37.037 5.39 0.00 0.00 2.52
585 606 6.911250 TTTCTACTAGTGACAGGTGAATCA 57.089 37.500 5.39 0.00 0.00 2.57
586 607 5.899120 TCTACTAGTGACAGGTGAATCAC 57.101 43.478 5.39 4.51 44.64 3.06
592 613 3.930336 GTGACAGGTGAATCACTCATCA 58.070 45.455 13.53 10.83 41.69 3.07
593 614 4.318332 GTGACAGGTGAATCACTCATCAA 58.682 43.478 13.53 0.00 41.69 2.57
594 615 4.756642 GTGACAGGTGAATCACTCATCAAA 59.243 41.667 13.53 0.00 41.69 2.69
595 616 4.756642 TGACAGGTGAATCACTCATCAAAC 59.243 41.667 13.53 0.00 37.67 2.93
596 617 4.717877 ACAGGTGAATCACTCATCAAACA 58.282 39.130 13.53 0.00 37.67 2.83
597 618 5.319453 ACAGGTGAATCACTCATCAAACAT 58.681 37.500 13.53 0.00 37.67 2.71
598 619 6.475504 ACAGGTGAATCACTCATCAAACATA 58.524 36.000 13.53 0.00 37.67 2.29
599 620 6.372659 ACAGGTGAATCACTCATCAAACATAC 59.627 38.462 13.53 0.00 37.67 2.39
600 621 5.582269 AGGTGAATCACTCATCAAACATACG 59.418 40.000 13.53 0.00 37.67 3.06
601 622 5.351465 GGTGAATCACTCATCAAACATACGT 59.649 40.000 13.53 0.00 35.00 3.57
602 623 6.533723 GGTGAATCACTCATCAAACATACGTA 59.466 38.462 13.53 0.00 35.00 3.57
603 624 7.064134 GGTGAATCACTCATCAAACATACGTAA 59.936 37.037 13.53 0.00 35.00 3.18
604 625 8.440059 GTGAATCACTCATCAAACATACGTAAA 58.560 33.333 6.07 0.00 36.14 2.01
605 626 8.440059 TGAATCACTCATCAAACATACGTAAAC 58.560 33.333 0.00 0.00 0.00 2.01
606 627 8.547967 AATCACTCATCAAACATACGTAAACT 57.452 30.769 0.00 0.00 0.00 2.66
607 628 9.647797 AATCACTCATCAAACATACGTAAACTA 57.352 29.630 0.00 0.00 0.00 2.24
608 629 8.456904 TCACTCATCAAACATACGTAAACTAC 57.543 34.615 0.00 0.00 0.00 2.73
609 630 8.301720 TCACTCATCAAACATACGTAAACTACT 58.698 33.333 0.00 0.00 0.00 2.57
610 631 8.584600 CACTCATCAAACATACGTAAACTACTC 58.415 37.037 0.00 0.00 0.00 2.59
611 632 7.484007 ACTCATCAAACATACGTAAACTACTCG 59.516 37.037 0.00 0.00 0.00 4.18
612 633 6.748658 TCATCAAACATACGTAAACTACTCGG 59.251 38.462 0.00 0.00 0.00 4.63
613 634 4.858692 TCAAACATACGTAAACTACTCGGC 59.141 41.667 0.00 0.00 0.00 5.54
614 635 3.056952 ACATACGTAAACTACTCGGCG 57.943 47.619 0.00 0.00 0.00 6.46
631 652 2.414029 CGGCGCATCAATAACAAACAGT 60.414 45.455 10.83 0.00 0.00 3.55
647 668 1.959226 AGTGCACCGTTAACCAGCG 60.959 57.895 14.63 0.00 0.00 5.18
658 679 3.006940 GTTAACCAGCGGATCATTCACA 58.993 45.455 0.00 0.00 0.00 3.58
660 681 0.107508 ACCAGCGGATCATTCACAGG 60.108 55.000 0.00 0.00 0.00 4.00
661 682 0.178767 CCAGCGGATCATTCACAGGA 59.821 55.000 0.00 0.00 0.00 3.86
663 684 1.667724 CAGCGGATCATTCACAGGAAC 59.332 52.381 0.00 0.00 35.46 3.62
664 685 1.017387 GCGGATCATTCACAGGAACC 58.983 55.000 0.00 0.00 35.46 3.62
691 714 1.604693 GGCGAGTGGTCTTTTCTTCGA 60.605 52.381 0.00 0.00 0.00 3.71
702 725 0.246360 TTTCTTCGAGGCATCAGCGA 59.754 50.000 0.00 0.00 43.41 4.93
704 727 1.318576 TCTTCGAGGCATCAGCGATA 58.681 50.000 0.00 0.00 43.41 2.92
732 755 2.511373 CGCCTCGGCAGCATGTTA 60.511 61.111 8.87 0.00 42.06 2.41
911 934 0.739112 GCCTCTTCAGTCTTCAGCCG 60.739 60.000 0.00 0.00 0.00 5.52
912 935 0.739112 CCTCTTCAGTCTTCAGCCGC 60.739 60.000 0.00 0.00 0.00 6.53
923 946 3.753434 CAGCCGCGGAGACAGAGT 61.753 66.667 33.48 0.00 0.00 3.24
1046 1077 1.401905 GCTGGCCTGAGAAATTAACCG 59.598 52.381 14.77 0.00 0.00 4.44
1057 1088 1.616159 AATTAACCGGTGCACTGCTT 58.384 45.000 20.76 15.45 0.00 3.91
1073 1104 2.720578 CTGCTTATGCGTGTGTGTTTTG 59.279 45.455 0.00 0.00 43.34 2.44
1156 1193 4.096003 ATGTCGGGGAAGGCCGTG 62.096 66.667 0.00 0.00 33.83 4.94
1264 1301 2.524394 GGCTCCAGGATCGCCCTA 60.524 66.667 8.35 0.00 45.60 3.53
1309 1346 2.030185 CAGGCGTGTAAGTGTCACTACT 60.030 50.000 5.77 0.00 34.14 2.57
1310 1347 3.189910 CAGGCGTGTAAGTGTCACTACTA 59.810 47.826 5.77 0.00 34.14 1.82
1311 1348 3.190118 AGGCGTGTAAGTGTCACTACTAC 59.810 47.826 5.77 6.89 34.14 2.73
1319 1356 2.740981 AGTGTCACTACTACCGTTCGAG 59.259 50.000 2.87 0.00 0.00 4.04
1323 1360 0.445436 ACTACTACCGTTCGAGCACG 59.555 55.000 2.65 2.65 40.02 5.34
1324 1361 0.445436 CTACTACCGTTCGAGCACGT 59.555 55.000 8.68 2.02 38.57 4.49
1325 1362 1.660607 CTACTACCGTTCGAGCACGTA 59.339 52.381 8.68 3.04 38.57 3.57
1326 1363 0.166814 ACTACCGTTCGAGCACGTAC 59.833 55.000 8.68 3.12 38.57 3.67
1327 1364 0.166597 CTACCGTTCGAGCACGTACA 59.833 55.000 13.03 0.00 39.17 2.90
1332 1416 1.454276 CGTTCGAGCACGTACATTGTT 59.546 47.619 13.03 0.00 39.17 2.83
1337 1421 2.284457 CGAGCACGTACATTGTTGATCG 60.284 50.000 11.70 11.70 34.56 3.69
1368 1452 3.121778 GCTTGGTTCATCGTTCATTTTGC 59.878 43.478 0.00 0.00 0.00 3.68
1375 1459 6.378582 GTTCATCGTTCATTTTGCCTTCTTA 58.621 36.000 0.00 0.00 0.00 2.10
1453 1537 1.684869 CCCACCAAGCCATTCGGTAAT 60.685 52.381 0.00 0.00 33.28 1.89
1460 1544 3.530265 AGCCATTCGGTAATCACGTAA 57.470 42.857 0.00 0.00 33.28 3.18
1461 1545 4.067972 AGCCATTCGGTAATCACGTAAT 57.932 40.909 0.00 0.00 33.28 1.89
1516 1607 9.674824 AGTACTATACTGATATTTGTTACGCAC 57.325 33.333 0.00 0.00 37.69 5.34
1526 1617 3.910862 TTGTTACGCACGTATGTATGC 57.089 42.857 3.43 0.00 38.52 3.14
1988 2224 0.242017 ACACGTCAACCTAGGTACGC 59.758 55.000 28.91 15.57 34.56 4.42
1991 2233 0.524862 CGTCAACCTAGGTACGCACT 59.475 55.000 21.05 0.00 0.00 4.40
1994 2236 3.181493 CGTCAACCTAGGTACGCACTTAT 60.181 47.826 21.05 0.00 0.00 1.73
1996 2238 4.097589 GTCAACCTAGGTACGCACTTATCT 59.902 45.833 16.67 0.00 0.00 1.98
1997 2239 5.297776 GTCAACCTAGGTACGCACTTATCTA 59.702 44.000 16.67 0.00 0.00 1.98
1998 2240 6.016443 GTCAACCTAGGTACGCACTTATCTAT 60.016 42.308 16.67 0.00 0.00 1.98
1999 2241 6.548622 TCAACCTAGGTACGCACTTATCTATT 59.451 38.462 16.67 0.00 0.00 1.73
2000 2242 6.973460 ACCTAGGTACGCACTTATCTATTT 57.027 37.500 14.41 0.00 0.00 1.40
2001 2243 6.746120 ACCTAGGTACGCACTTATCTATTTG 58.254 40.000 14.41 0.00 0.00 2.32
2002 2244 5.634020 CCTAGGTACGCACTTATCTATTTGC 59.366 44.000 0.00 0.00 0.00 3.68
2003 2245 5.018539 AGGTACGCACTTATCTATTTGCA 57.981 39.130 0.00 0.00 34.49 4.08
2005 2247 3.925688 ACGCACTTATCTATTTGCACG 57.074 42.857 0.00 0.00 34.49 5.34
2006 2248 3.259064 ACGCACTTATCTATTTGCACGT 58.741 40.909 0.00 0.00 34.49 4.49
2007 2249 4.426416 ACGCACTTATCTATTTGCACGTA 58.574 39.130 0.00 0.00 34.49 3.57
2008 2250 5.047847 ACGCACTTATCTATTTGCACGTAT 58.952 37.500 0.00 0.00 34.49 3.06
2010 2252 5.051039 CGCACTTATCTATTTGCACGTATGT 60.051 40.000 0.00 0.00 34.49 2.29
2011 2253 6.509517 CGCACTTATCTATTTGCACGTATGTT 60.510 38.462 0.00 0.00 34.49 2.71
2015 2257 4.955925 TCTATTTGCACGTATGTTTGGG 57.044 40.909 0.00 0.00 0.00 4.12
2016 2258 4.328536 TCTATTTGCACGTATGTTTGGGT 58.671 39.130 0.00 0.00 0.00 4.51
2017 2259 5.489249 TCTATTTGCACGTATGTTTGGGTA 58.511 37.500 0.00 0.00 0.00 3.69
2018 2260 3.900388 TTTGCACGTATGTTTGGGTAC 57.100 42.857 0.00 0.00 0.00 3.34
2020 2262 0.722848 GCACGTATGTTTGGGTACGG 59.277 55.000 9.35 1.00 45.75 4.02
2021 2263 1.672441 GCACGTATGTTTGGGTACGGA 60.672 52.381 9.35 0.00 45.75 4.69
2022 2264 2.264813 CACGTATGTTTGGGTACGGAG 58.735 52.381 9.35 0.00 45.75 4.63
2023 2265 1.205417 ACGTATGTTTGGGTACGGAGG 59.795 52.381 9.35 0.00 45.75 4.30
2026 2270 0.616891 ATGTTTGGGTACGGAGGGTC 59.383 55.000 0.00 0.00 0.00 4.46
2047 2297 0.526954 GTACGTACCGTGGCTCCATG 60.527 60.000 15.00 1.13 41.39 3.66
2148 2406 3.329889 TGCATGAAGTCCGGCCCT 61.330 61.111 0.00 0.00 0.00 5.19
2188 2451 4.106029 TCTAGTGCACCGAACTGAATAC 57.894 45.455 14.63 0.00 0.00 1.89
2195 2458 4.094739 TGCACCGAACTGAATACATTGATG 59.905 41.667 0.00 0.00 0.00 3.07
2196 2459 4.496341 GCACCGAACTGAATACATTGATGG 60.496 45.833 0.00 0.00 0.00 3.51
2199 2462 6.315144 CACCGAACTGAATACATTGATGGTTA 59.685 38.462 0.00 0.00 0.00 2.85
2201 2464 7.556275 ACCGAACTGAATACATTGATGGTTAAT 59.444 33.333 0.00 0.00 0.00 1.40
2203 2466 8.611757 CGAACTGAATACATTGATGGTTAATCA 58.388 33.333 0.00 0.00 43.79 2.57
2223 2486 4.484236 TCATCGTTTTGCCATGTCATTTC 58.516 39.130 0.00 0.00 0.00 2.17
2224 2487 2.927429 TCGTTTTGCCATGTCATTTCG 58.073 42.857 0.00 0.00 0.00 3.46
2225 2488 1.386412 CGTTTTGCCATGTCATTTCGC 59.614 47.619 0.00 0.00 0.00 4.70
2226 2489 2.676076 GTTTTGCCATGTCATTTCGCT 58.324 42.857 0.00 0.00 0.00 4.93
2227 2490 2.350899 TTTGCCATGTCATTTCGCTG 57.649 45.000 0.00 0.00 0.00 5.18
2228 2491 1.532523 TTGCCATGTCATTTCGCTGA 58.467 45.000 0.00 0.00 0.00 4.26
2230 2493 1.672363 TGCCATGTCATTTCGCTGATC 59.328 47.619 0.00 0.00 0.00 2.92
2231 2494 1.945394 GCCATGTCATTTCGCTGATCT 59.055 47.619 0.00 0.00 0.00 2.75
2232 2495 2.286831 GCCATGTCATTTCGCTGATCTG 60.287 50.000 0.00 0.00 0.00 2.90
2233 2496 2.941064 CCATGTCATTTCGCTGATCTGT 59.059 45.455 1.27 0.00 0.00 3.41
2234 2497 3.002042 CCATGTCATTTCGCTGATCTGTC 59.998 47.826 1.27 0.00 0.00 3.51
2235 2498 2.262211 TGTCATTTCGCTGATCTGTCG 58.738 47.619 1.27 5.90 0.00 4.35
2238 2501 2.099098 TCATTTCGCTGATCTGTCGCTA 59.901 45.455 10.12 3.64 0.00 4.26
2240 2503 2.125461 TTCGCTGATCTGTCGCTATG 57.875 50.000 10.12 0.00 0.00 2.23
2251 2514 3.289834 CGCTATGGCCATGGGTGC 61.290 66.667 29.04 22.66 34.44 5.01
2285 2554 1.585006 CGTCAAGTACCACGAGCCT 59.415 57.895 4.05 0.00 38.32 4.58
2402 2671 5.741011 TCCATCAACCAGTAAGTACAATCC 58.259 41.667 0.00 0.00 0.00 3.01
2403 2672 5.249622 TCCATCAACCAGTAAGTACAATCCA 59.750 40.000 0.00 0.00 0.00 3.41
2457 2726 1.359848 ACGTCGTTGGCTGATGATTC 58.640 50.000 0.00 0.00 0.00 2.52
2670 2939 0.034616 GTGAAGCTGACCTGCTCTGT 59.965 55.000 1.94 0.00 43.24 3.41
2878 3147 2.100631 CCGTGATGTCGACCAAGCC 61.101 63.158 14.12 0.00 0.00 4.35
2879 3148 1.079819 CGTGATGTCGACCAAGCCT 60.080 57.895 14.12 0.00 0.00 4.58
2941 3211 3.808728 TCAGAGAAAGGAACCAACTGTG 58.191 45.455 0.00 0.00 0.00 3.66
3025 3298 1.002624 TGGTGATCCAACCGAAGGC 60.003 57.895 0.00 0.00 46.67 4.35
3117 3650 2.358898 CCATTGTTAGGATTCCAAGCCG 59.641 50.000 5.29 0.00 40.07 5.52
3261 3812 1.984570 CCTCCGCACCTCCTCTTCA 60.985 63.158 0.00 0.00 0.00 3.02
3353 3904 0.878523 TCGCCGTTGGTCTTTGTCAG 60.879 55.000 0.00 0.00 0.00 3.51
3406 3957 0.175989 GATGACGAGGGTTGGTCTCC 59.824 60.000 0.00 0.00 33.65 3.71
3414 3965 1.421646 AGGGTTGGTCTCCTTCACAAG 59.578 52.381 0.00 0.00 0.00 3.16
3477 4028 2.056577 GATGCTGCTGCTGTTTTTGTC 58.943 47.619 17.00 0.00 40.48 3.18
3481 4032 2.639000 GCTGCTGTTTTTGTCGCGC 61.639 57.895 0.00 0.00 0.00 6.86
3482 4033 2.010817 CTGCTGTTTTTGTCGCGCC 61.011 57.895 0.00 0.00 0.00 6.53
3483 4034 2.025441 GCTGTTTTTGTCGCGCCA 59.975 55.556 0.00 0.00 0.00 5.69
3484 4035 2.292916 GCTGTTTTTGTCGCGCCAC 61.293 57.895 0.00 0.00 0.00 5.01
3485 4036 1.355210 CTGTTTTTGTCGCGCCACT 59.645 52.632 6.72 0.00 0.00 4.00
3486 4037 0.248458 CTGTTTTTGTCGCGCCACTT 60.248 50.000 6.72 0.00 0.00 3.16
3487 4038 0.248296 TGTTTTTGTCGCGCCACTTC 60.248 50.000 6.72 0.00 0.00 3.01
3488 4039 1.010574 TTTTTGTCGCGCCACTTCG 60.011 52.632 6.72 0.00 0.00 3.79
3489 4040 1.707239 TTTTTGTCGCGCCACTTCGT 61.707 50.000 6.72 0.00 0.00 3.85
3490 4041 2.096481 TTTTGTCGCGCCACTTCGTC 62.096 55.000 6.72 0.00 0.00 4.20
3493 4044 4.111016 TCGCGCCACTTCGTCGAT 62.111 61.111 0.00 0.00 34.84 3.59
3494 4045 3.179265 CGCGCCACTTCGTCGATT 61.179 61.111 0.00 0.00 33.36 3.34
3495 4046 1.870458 CGCGCCACTTCGTCGATTA 60.870 57.895 0.00 0.00 33.36 1.75
3496 4047 1.206745 CGCGCCACTTCGTCGATTAT 61.207 55.000 0.00 0.00 33.36 1.28
3497 4048 0.503117 GCGCCACTTCGTCGATTATC 59.497 55.000 0.00 0.00 0.00 1.75
3498 4049 1.129326 CGCCACTTCGTCGATTATCC 58.871 55.000 0.00 0.00 0.00 2.59
3499 4050 1.129326 GCCACTTCGTCGATTATCCG 58.871 55.000 0.00 0.00 0.00 4.18
3500 4051 1.268896 GCCACTTCGTCGATTATCCGA 60.269 52.381 0.00 0.00 36.06 4.55
3501 4052 2.651701 CCACTTCGTCGATTATCCGAG 58.348 52.381 0.00 0.00 39.43 4.63
3502 4053 2.604855 CCACTTCGTCGATTATCCGAGG 60.605 54.545 0.00 3.47 43.32 4.63
3505 4056 1.233019 TCGTCGATTATCCGAGGACC 58.767 55.000 0.00 0.00 44.89 4.46
3506 4057 0.949397 CGTCGATTATCCGAGGACCA 59.051 55.000 0.00 0.00 44.30 4.02
3507 4058 1.335810 CGTCGATTATCCGAGGACCAA 59.664 52.381 0.00 0.00 44.30 3.67
3508 4059 2.604855 CGTCGATTATCCGAGGACCAAG 60.605 54.545 0.00 0.00 44.30 3.61
3509 4060 1.340248 TCGATTATCCGAGGACCAAGC 59.660 52.381 0.00 0.00 34.19 4.01
3510 4061 1.068588 CGATTATCCGAGGACCAAGCA 59.931 52.381 0.00 0.00 0.00 3.91
3511 4062 2.483013 CGATTATCCGAGGACCAAGCAA 60.483 50.000 0.00 0.00 0.00 3.91
3512 4063 3.744660 GATTATCCGAGGACCAAGCAAT 58.255 45.455 0.00 0.00 0.00 3.56
3513 4064 2.910688 TATCCGAGGACCAAGCAATC 57.089 50.000 0.00 0.00 0.00 2.67
3514 4065 0.911769 ATCCGAGGACCAAGCAATCA 59.088 50.000 0.00 0.00 0.00 2.57
3515 4066 0.036388 TCCGAGGACCAAGCAATCAC 60.036 55.000 0.00 0.00 0.00 3.06
3516 4067 0.321564 CCGAGGACCAAGCAATCACA 60.322 55.000 0.00 0.00 0.00 3.58
3517 4068 0.798776 CGAGGACCAAGCAATCACAC 59.201 55.000 0.00 0.00 0.00 3.82
3518 4069 0.798776 GAGGACCAAGCAATCACACG 59.201 55.000 0.00 0.00 0.00 4.49
3519 4070 0.396435 AGGACCAAGCAATCACACGA 59.604 50.000 0.00 0.00 0.00 4.35
3520 4071 0.798776 GGACCAAGCAATCACACGAG 59.201 55.000 0.00 0.00 0.00 4.18
3521 4072 0.166814 GACCAAGCAATCACACGAGC 59.833 55.000 0.00 0.00 0.00 5.03
3522 4073 0.534877 ACCAAGCAATCACACGAGCA 60.535 50.000 0.00 0.00 0.00 4.26
3523 4074 0.592637 CCAAGCAATCACACGAGCAA 59.407 50.000 0.00 0.00 0.00 3.91
3524 4075 1.400629 CCAAGCAATCACACGAGCAAG 60.401 52.381 0.00 0.00 0.00 4.01
3525 4076 1.532437 CAAGCAATCACACGAGCAAGA 59.468 47.619 0.00 0.00 0.00 3.02
3526 4077 1.151668 AGCAATCACACGAGCAAGAC 58.848 50.000 0.00 0.00 0.00 3.01
3527 4078 0.867746 GCAATCACACGAGCAAGACA 59.132 50.000 0.00 0.00 0.00 3.41
3528 4079 1.466167 GCAATCACACGAGCAAGACAT 59.534 47.619 0.00 0.00 0.00 3.06
3529 4080 2.475187 GCAATCACACGAGCAAGACATC 60.475 50.000 0.00 0.00 0.00 3.06
3530 4081 1.633561 ATCACACGAGCAAGACATCG 58.366 50.000 0.00 0.00 44.36 3.84
3531 4082 0.596082 TCACACGAGCAAGACATCGA 59.404 50.000 1.13 0.00 41.40 3.59
3532 4083 0.987715 CACACGAGCAAGACATCGAG 59.012 55.000 1.13 0.00 41.40 4.04
3533 4084 0.881796 ACACGAGCAAGACATCGAGA 59.118 50.000 1.13 0.00 41.40 4.04
3534 4085 1.474478 ACACGAGCAAGACATCGAGAT 59.526 47.619 1.13 0.00 41.40 2.75
3535 4086 2.094494 ACACGAGCAAGACATCGAGATT 60.094 45.455 1.13 0.00 41.40 2.40
3536 4087 2.926200 CACGAGCAAGACATCGAGATTT 59.074 45.455 1.13 0.00 41.40 2.17
3537 4088 2.926200 ACGAGCAAGACATCGAGATTTG 59.074 45.455 1.13 0.00 41.40 2.32
3538 4089 2.926200 CGAGCAAGACATCGAGATTTGT 59.074 45.455 0.00 0.00 41.40 2.83
3539 4090 3.369147 CGAGCAAGACATCGAGATTTGTT 59.631 43.478 0.00 0.00 41.40 2.83
3540 4091 4.562789 CGAGCAAGACATCGAGATTTGTTA 59.437 41.667 0.00 0.00 41.40 2.41
3541 4092 5.062183 CGAGCAAGACATCGAGATTTGTTAA 59.938 40.000 0.00 0.00 41.40 2.01
3542 4093 6.170675 AGCAAGACATCGAGATTTGTTAAC 57.829 37.500 0.00 0.00 0.00 2.01
3543 4094 5.015733 GCAAGACATCGAGATTTGTTAACG 58.984 41.667 0.26 0.00 0.00 3.18
3544 4095 5.163992 GCAAGACATCGAGATTTGTTAACGA 60.164 40.000 0.26 0.00 37.39 3.85
3545 4096 6.461816 CAAGACATCGAGATTTGTTAACGAG 58.538 40.000 0.26 0.00 36.49 4.18
3546 4097 5.103000 AGACATCGAGATTTGTTAACGAGG 58.897 41.667 0.26 0.00 39.86 4.63
3547 4098 4.817517 ACATCGAGATTTGTTAACGAGGT 58.182 39.130 0.00 0.00 41.62 3.85
3548 4099 5.235516 ACATCGAGATTTGTTAACGAGGTT 58.764 37.500 0.00 0.00 43.27 3.50
3549 4100 5.347907 ACATCGAGATTTGTTAACGAGGTTC 59.652 40.000 0.00 0.00 43.27 3.62
3550 4101 4.873817 TCGAGATTTGTTAACGAGGTTCA 58.126 39.130 0.26 0.00 0.00 3.18
3551 4102 5.475719 TCGAGATTTGTTAACGAGGTTCAT 58.524 37.500 0.26 0.00 0.00 2.57
3552 4103 5.575606 TCGAGATTTGTTAACGAGGTTCATC 59.424 40.000 0.26 0.00 0.00 2.92
3554 4105 5.475719 AGATTTGTTAACGAGGTTCATCGA 58.524 37.500 13.45 0.00 45.56 3.59
3555 4106 6.106673 AGATTTGTTAACGAGGTTCATCGAT 58.893 36.000 13.45 4.51 45.56 3.59
3556 4107 7.262772 AGATTTGTTAACGAGGTTCATCGATA 58.737 34.615 13.45 3.54 45.56 2.92
3557 4108 7.926555 AGATTTGTTAACGAGGTTCATCGATAT 59.073 33.333 13.45 2.69 45.56 1.63
3558 4109 6.822073 TTGTTAACGAGGTTCATCGATATG 57.178 37.500 13.45 0.00 45.56 1.78
3559 4110 6.139048 TGTTAACGAGGTTCATCGATATGA 57.861 37.500 13.45 0.00 45.56 2.15
3560 4111 5.975344 TGTTAACGAGGTTCATCGATATGAC 59.025 40.000 13.45 3.67 45.56 3.06
3561 4112 4.920640 AACGAGGTTCATCGATATGACT 57.079 40.909 13.45 0.00 45.56 3.41
3562 4113 7.012610 TGTTAACGAGGTTCATCGATATGACTA 59.987 37.037 13.45 0.00 45.56 2.59
3563 4114 5.359716 ACGAGGTTCATCGATATGACTAC 57.640 43.478 13.45 0.00 45.56 2.73
3564 4115 4.820173 ACGAGGTTCATCGATATGACTACA 59.180 41.667 13.45 0.00 45.56 2.74
3565 4116 5.473846 ACGAGGTTCATCGATATGACTACAT 59.526 40.000 13.45 0.00 45.56 2.29
3566 4117 6.653740 ACGAGGTTCATCGATATGACTACATA 59.346 38.462 13.45 0.00 45.56 2.29
3567 4118 6.962116 CGAGGTTCATCGATATGACTACATAC 59.038 42.308 0.00 0.00 45.56 2.39
3568 4119 7.159322 AGGTTCATCGATATGACTACATACC 57.841 40.000 0.00 0.00 41.87 2.73
3569 4120 6.719829 AGGTTCATCGATATGACTACATACCA 59.280 38.462 0.00 0.00 41.87 3.25
3570 4121 7.232737 AGGTTCATCGATATGACTACATACCAA 59.767 37.037 0.00 0.00 41.87 3.67
3571 4122 7.542477 GGTTCATCGATATGACTACATACCAAG 59.458 40.741 0.00 0.00 41.87 3.61
3572 4123 7.158099 TCATCGATATGACTACATACCAAGG 57.842 40.000 0.00 0.00 41.03 3.61
3573 4124 5.386958 TCGATATGACTACATACCAAGGC 57.613 43.478 0.00 0.00 41.03 4.35
3574 4125 5.077564 TCGATATGACTACATACCAAGGCT 58.922 41.667 0.00 0.00 41.03 4.58
3575 4126 5.048013 TCGATATGACTACATACCAAGGCTG 60.048 44.000 0.00 0.00 41.03 4.85
3576 4127 5.048013 CGATATGACTACATACCAAGGCTGA 60.048 44.000 0.00 0.00 41.03 4.26
3577 4128 3.887621 TGACTACATACCAAGGCTGAC 57.112 47.619 0.00 0.00 0.00 3.51
3578 4129 3.441101 TGACTACATACCAAGGCTGACT 58.559 45.455 0.00 0.00 0.00 3.41
3579 4130 4.606210 TGACTACATACCAAGGCTGACTA 58.394 43.478 0.00 0.00 0.00 2.59
3580 4131 5.208890 TGACTACATACCAAGGCTGACTAT 58.791 41.667 0.00 0.00 0.00 2.12
3581 4132 5.069119 TGACTACATACCAAGGCTGACTATG 59.931 44.000 0.00 0.00 0.00 2.23
3582 4133 3.845781 ACATACCAAGGCTGACTATGG 57.154 47.619 9.35 9.35 38.91 2.74
3583 4134 2.439507 ACATACCAAGGCTGACTATGGG 59.560 50.000 13.81 5.68 37.26 4.00
3584 4135 0.837272 TACCAAGGCTGACTATGGGC 59.163 55.000 13.81 0.00 37.26 5.36
3585 4136 1.524621 CCAAGGCTGACTATGGGCG 60.525 63.158 0.00 0.00 0.00 6.13
3586 4137 2.182842 CAAGGCTGACTATGGGCGC 61.183 63.158 0.00 0.00 0.00 6.53
3587 4138 2.370445 AAGGCTGACTATGGGCGCT 61.370 57.895 7.64 0.00 0.00 5.92
3588 4139 2.280457 GGCTGACTATGGGCGCTC 60.280 66.667 7.64 2.47 0.00 5.03
3589 4140 2.280457 GCTGACTATGGGCGCTCC 60.280 66.667 3.94 6.36 0.00 4.70
3590 4141 2.801631 GCTGACTATGGGCGCTCCT 61.802 63.158 3.94 0.00 36.20 3.69
3591 4142 1.826024 CTGACTATGGGCGCTCCTT 59.174 57.895 3.94 6.68 36.20 3.36
3592 4143 0.179000 CTGACTATGGGCGCTCCTTT 59.821 55.000 3.94 0.64 36.20 3.11
3593 4144 0.178068 TGACTATGGGCGCTCCTTTC 59.822 55.000 3.94 0.00 36.20 2.62
3594 4145 0.533085 GACTATGGGCGCTCCTTTCC 60.533 60.000 3.94 0.00 36.20 3.13
3595 4146 1.271840 ACTATGGGCGCTCCTTTCCA 61.272 55.000 3.94 3.52 36.20 3.53
3596 4147 0.109342 CTATGGGCGCTCCTTTCCAT 59.891 55.000 16.24 16.24 42.12 3.41
3597 4148 0.179020 TATGGGCGCTCCTTTCCATG 60.179 55.000 19.87 0.00 39.96 3.66
3598 4149 1.925285 ATGGGCGCTCCTTTCCATGA 61.925 55.000 3.94 0.00 38.45 3.07
3599 4150 2.115291 GGGCGCTCCTTTCCATGAC 61.115 63.158 7.64 0.00 0.00 3.06
3600 4151 1.377202 GGCGCTCCTTTCCATGACA 60.377 57.895 7.64 0.00 0.00 3.58
3601 4152 1.648467 GGCGCTCCTTTCCATGACAC 61.648 60.000 7.64 0.00 0.00 3.67
3602 4153 1.648467 GCGCTCCTTTCCATGACACC 61.648 60.000 0.00 0.00 0.00 4.16
3603 4154 1.361668 CGCTCCTTTCCATGACACCG 61.362 60.000 0.00 0.00 0.00 4.94
3604 4155 1.648467 GCTCCTTTCCATGACACCGC 61.648 60.000 0.00 0.00 0.00 5.68
3605 4156 0.036010 CTCCTTTCCATGACACCGCT 60.036 55.000 0.00 0.00 0.00 5.52
3606 4157 1.207089 CTCCTTTCCATGACACCGCTA 59.793 52.381 0.00 0.00 0.00 4.26
3607 4158 1.066430 TCCTTTCCATGACACCGCTAC 60.066 52.381 0.00 0.00 0.00 3.58
3608 4159 1.338674 CCTTTCCATGACACCGCTACA 60.339 52.381 0.00 0.00 0.00 2.74
3609 4160 2.422597 CTTTCCATGACACCGCTACAA 58.577 47.619 0.00 0.00 0.00 2.41
3610 4161 2.779755 TTCCATGACACCGCTACAAT 57.220 45.000 0.00 0.00 0.00 2.71
3611 4162 3.897141 TTCCATGACACCGCTACAATA 57.103 42.857 0.00 0.00 0.00 1.90
3612 4163 3.173668 TCCATGACACCGCTACAATAC 57.826 47.619 0.00 0.00 0.00 1.89
3613 4164 2.159014 TCCATGACACCGCTACAATACC 60.159 50.000 0.00 0.00 0.00 2.73
3614 4165 1.858458 CATGACACCGCTACAATACCG 59.142 52.381 0.00 0.00 0.00 4.02
3615 4166 0.458889 TGACACCGCTACAATACCGC 60.459 55.000 0.00 0.00 0.00 5.68
3616 4167 1.477030 GACACCGCTACAATACCGCG 61.477 60.000 0.00 0.00 45.86 6.46
3617 4168 1.517694 CACCGCTACAATACCGCGT 60.518 57.895 4.92 0.00 44.92 6.01
3618 4169 1.226773 ACCGCTACAATACCGCGTC 60.227 57.895 4.92 0.00 44.92 5.19
3619 4170 1.947642 CCGCTACAATACCGCGTCC 60.948 63.158 4.92 0.00 44.92 4.79
3620 4171 2.290789 CGCTACAATACCGCGTCCG 61.291 63.158 4.92 0.00 41.78 4.79
3632 4183 4.112341 CGTCCGGTCGTCCTGGAC 62.112 72.222 22.61 22.61 45.16 4.02
3666 4217 4.265056 AGCTTCCCCCGCGTTGTT 62.265 61.111 4.92 0.00 0.00 2.83
3667 4218 4.038080 GCTTCCCCCGCGTTGTTG 62.038 66.667 4.92 0.00 0.00 3.33
3668 4219 2.593436 CTTCCCCCGCGTTGTTGT 60.593 61.111 4.92 0.00 0.00 3.32
3669 4220 2.902846 TTCCCCCGCGTTGTTGTG 60.903 61.111 4.92 0.00 0.00 3.33
3672 4223 3.893763 CCCCGCGTTGTTGTGCAA 61.894 61.111 4.92 0.00 34.16 4.08
3673 4224 2.334653 CCCGCGTTGTTGTGCAAT 59.665 55.556 4.92 0.00 39.55 3.56
3674 4225 1.299773 CCCGCGTTGTTGTGCAATT 60.300 52.632 4.92 0.00 39.55 2.32
3675 4226 0.039978 CCCGCGTTGTTGTGCAATTA 60.040 50.000 4.92 0.00 39.55 1.40
3676 4227 1.402194 CCCGCGTTGTTGTGCAATTAT 60.402 47.619 4.92 0.00 39.55 1.28
3677 4228 1.648191 CCGCGTTGTTGTGCAATTATG 59.352 47.619 4.92 0.00 39.55 1.90
3678 4229 2.315011 CGCGTTGTTGTGCAATTATGT 58.685 42.857 0.00 0.00 39.55 2.29
3679 4230 2.723658 CGCGTTGTTGTGCAATTATGTT 59.276 40.909 0.00 0.00 39.55 2.71
3680 4231 3.420289 CGCGTTGTTGTGCAATTATGTTG 60.420 43.478 0.00 0.00 39.55 3.33
3681 4232 3.121058 GCGTTGTTGTGCAATTATGTTGG 60.121 43.478 0.00 0.00 39.55 3.77
3682 4233 3.121058 CGTTGTTGTGCAATTATGTTGGC 60.121 43.478 0.00 0.00 39.55 4.52
3683 4234 3.740631 TGTTGTGCAATTATGTTGGCA 57.259 38.095 0.00 0.00 0.00 4.92
3684 4235 4.268797 TGTTGTGCAATTATGTTGGCAT 57.731 36.364 0.00 0.00 38.68 4.40
3685 4236 5.397142 TGTTGTGCAATTATGTTGGCATA 57.603 34.783 0.00 0.00 38.68 3.14
3686 4237 5.409211 TGTTGTGCAATTATGTTGGCATAG 58.591 37.500 0.00 0.00 38.64 2.23
3687 4238 4.652421 TGTGCAATTATGTTGGCATAGG 57.348 40.909 0.00 0.00 38.64 2.57
3688 4239 4.022603 TGTGCAATTATGTTGGCATAGGT 58.977 39.130 0.00 0.00 38.64 3.08
3689 4240 4.465660 TGTGCAATTATGTTGGCATAGGTT 59.534 37.500 0.00 0.00 38.64 3.50
3690 4241 5.654209 TGTGCAATTATGTTGGCATAGGTTA 59.346 36.000 0.00 0.00 38.64 2.85
3691 4242 5.977129 GTGCAATTATGTTGGCATAGGTTAC 59.023 40.000 0.00 0.00 38.64 2.50
3692 4243 5.654209 TGCAATTATGTTGGCATAGGTTACA 59.346 36.000 0.00 0.00 38.64 2.41
3693 4244 6.323482 TGCAATTATGTTGGCATAGGTTACAT 59.677 34.615 5.64 5.64 38.64 2.29
3694 4245 6.863126 GCAATTATGTTGGCATAGGTTACATC 59.137 38.462 3.66 0.00 38.64 3.06
3695 4246 6.801539 ATTATGTTGGCATAGGTTACATCG 57.198 37.500 3.66 0.00 38.64 3.84
3696 4247 3.620427 TGTTGGCATAGGTTACATCGT 57.380 42.857 0.00 0.00 0.00 3.73
3697 4248 3.266636 TGTTGGCATAGGTTACATCGTG 58.733 45.455 0.00 0.00 0.00 4.35
3698 4249 3.267483 GTTGGCATAGGTTACATCGTGT 58.733 45.455 0.00 0.00 0.00 4.49
3699 4250 2.899976 TGGCATAGGTTACATCGTGTG 58.100 47.619 1.58 0.00 0.00 3.82
3700 4251 2.235155 TGGCATAGGTTACATCGTGTGT 59.765 45.455 1.58 1.87 44.95 3.72
3701 4252 2.864343 GGCATAGGTTACATCGTGTGTC 59.136 50.000 0.00 0.00 42.29 3.67
3702 4253 3.430374 GGCATAGGTTACATCGTGTGTCT 60.430 47.826 0.00 0.00 42.29 3.41
3703 4254 4.202080 GGCATAGGTTACATCGTGTGTCTA 60.202 45.833 0.00 0.00 42.29 2.59
3704 4255 4.738740 GCATAGGTTACATCGTGTGTCTAC 59.261 45.833 0.00 1.46 42.29 2.59
3705 4256 3.863142 AGGTTACATCGTGTGTCTACC 57.137 47.619 14.22 14.22 42.04 3.18
3706 4257 2.494870 AGGTTACATCGTGTGTCTACCC 59.505 50.000 16.46 7.75 42.39 3.69
3707 4258 2.494870 GGTTACATCGTGTGTCTACCCT 59.505 50.000 12.48 0.00 42.29 4.34
3708 4259 3.428589 GGTTACATCGTGTGTCTACCCTC 60.429 52.174 12.48 0.00 42.29 4.30
3709 4260 0.809385 ACATCGTGTGTCTACCCTCG 59.191 55.000 0.00 0.00 35.77 4.63
3710 4261 1.092348 CATCGTGTGTCTACCCTCGA 58.908 55.000 0.00 0.00 0.00 4.04
3711 4262 1.676529 CATCGTGTGTCTACCCTCGAT 59.323 52.381 0.00 0.00 35.88 3.59
3712 4263 2.696989 TCGTGTGTCTACCCTCGATA 57.303 50.000 0.00 0.00 0.00 2.92
3713 4264 3.204306 TCGTGTGTCTACCCTCGATAT 57.796 47.619 0.00 0.00 0.00 1.63
3714 4265 4.341366 TCGTGTGTCTACCCTCGATATA 57.659 45.455 0.00 0.00 0.00 0.86
3715 4266 4.903054 TCGTGTGTCTACCCTCGATATAT 58.097 43.478 0.00 0.00 0.00 0.86
3716 4267 6.041423 TCGTGTGTCTACCCTCGATATATA 57.959 41.667 0.00 0.00 0.00 0.86
3717 4268 6.647229 TCGTGTGTCTACCCTCGATATATAT 58.353 40.000 0.00 0.00 0.00 0.86
3718 4269 6.537660 TCGTGTGTCTACCCTCGATATATATG 59.462 42.308 0.00 0.00 0.00 1.78
3719 4270 6.537660 CGTGTGTCTACCCTCGATATATATGA 59.462 42.308 0.00 0.00 0.00 2.15
3720 4271 7.065443 CGTGTGTCTACCCTCGATATATATGAA 59.935 40.741 0.00 0.00 0.00 2.57
3721 4272 8.737175 GTGTGTCTACCCTCGATATATATGAAA 58.263 37.037 0.00 0.00 0.00 2.69
3722 4273 8.957466 TGTGTCTACCCTCGATATATATGAAAG 58.043 37.037 0.00 0.00 0.00 2.62
3723 4274 9.175312 GTGTCTACCCTCGATATATATGAAAGA 57.825 37.037 0.00 0.00 0.00 2.52
3724 4275 9.175312 TGTCTACCCTCGATATATATGAAAGAC 57.825 37.037 0.00 8.73 0.00 3.01
3725 4276 8.623030 GTCTACCCTCGATATATATGAAAGACC 58.377 40.741 0.00 0.00 0.00 3.85
3726 4277 8.558312 TCTACCCTCGATATATATGAAAGACCT 58.442 37.037 0.00 0.00 0.00 3.85
3727 4278 9.848710 CTACCCTCGATATATATGAAAGACCTA 57.151 37.037 0.00 0.00 0.00 3.08
3728 4279 8.754991 ACCCTCGATATATATGAAAGACCTAG 57.245 38.462 0.00 0.00 0.00 3.02
3729 4280 7.780745 ACCCTCGATATATATGAAAGACCTAGG 59.219 40.741 7.41 7.41 0.00 3.02
3730 4281 7.999545 CCCTCGATATATATGAAAGACCTAGGA 59.000 40.741 17.98 0.00 0.00 2.94
3731 4282 9.581289 CCTCGATATATATGAAAGACCTAGGAT 57.419 37.037 17.98 0.00 0.00 3.24
3741 4292 7.598759 TGAAAGACCTAGGATATAAGTGTCC 57.401 40.000 17.98 0.00 35.96 4.02
3742 4293 7.363031 TGAAAGACCTAGGATATAAGTGTCCT 58.637 38.462 17.98 0.00 46.48 3.85
3743 4294 8.508601 TGAAAGACCTAGGATATAAGTGTCCTA 58.491 37.037 17.98 1.59 43.42 2.94
3744 4295 8.709272 AAAGACCTAGGATATAAGTGTCCTAC 57.291 38.462 17.98 0.00 43.42 3.18
3745 4296 7.651229 AGACCTAGGATATAAGTGTCCTACT 57.349 40.000 17.98 0.00 43.42 2.57
3746 4297 8.754258 AGACCTAGGATATAAGTGTCCTACTA 57.246 38.462 17.98 0.00 43.42 1.82
3747 4298 8.828751 AGACCTAGGATATAAGTGTCCTACTAG 58.171 40.741 17.98 0.00 43.42 2.57
3748 4299 7.931046 ACCTAGGATATAAGTGTCCTACTAGG 58.069 42.308 17.98 11.26 43.42 3.02
3749 4300 7.743139 ACCTAGGATATAAGTGTCCTACTAGGA 59.257 40.741 17.98 0.03 43.42 2.94
3758 4309 2.706339 TCCTACTAGGACACGACTCC 57.294 55.000 0.03 0.00 40.06 3.85
3759 4310 1.911357 TCCTACTAGGACACGACTCCA 59.089 52.381 0.03 0.00 40.06 3.86
3760 4311 2.508716 TCCTACTAGGACACGACTCCAT 59.491 50.000 0.03 0.00 40.06 3.41
3761 4312 3.713248 TCCTACTAGGACACGACTCCATA 59.287 47.826 0.03 0.00 40.06 2.74
3762 4313 4.350225 TCCTACTAGGACACGACTCCATAT 59.650 45.833 0.03 0.00 40.06 1.78
3763 4314 4.696402 CCTACTAGGACACGACTCCATATC 59.304 50.000 0.00 0.00 37.67 1.63
3764 4315 3.488363 ACTAGGACACGACTCCATATCC 58.512 50.000 0.00 0.00 31.94 2.59
3765 4316 2.757894 AGGACACGACTCCATATCCT 57.242 50.000 6.01 0.00 31.94 3.24
3766 4317 3.878237 AGGACACGACTCCATATCCTA 57.122 47.619 6.01 0.00 34.77 2.94
3767 4318 4.390129 AGGACACGACTCCATATCCTAT 57.610 45.455 6.01 0.00 34.77 2.57
3768 4319 4.337145 AGGACACGACTCCATATCCTATC 58.663 47.826 6.01 0.00 34.77 2.08
3769 4320 4.043561 AGGACACGACTCCATATCCTATCT 59.956 45.833 6.01 0.00 34.77 1.98
3770 4321 5.251005 AGGACACGACTCCATATCCTATCTA 59.749 44.000 6.01 0.00 34.77 1.98
3771 4322 5.944599 GGACACGACTCCATATCCTATCTAA 59.055 44.000 0.00 0.00 0.00 2.10
3772 4323 6.433404 GGACACGACTCCATATCCTATCTAAA 59.567 42.308 0.00 0.00 0.00 1.85
3773 4324 7.216973 ACACGACTCCATATCCTATCTAAAC 57.783 40.000 0.00 0.00 0.00 2.01
3774 4325 6.776116 ACACGACTCCATATCCTATCTAAACA 59.224 38.462 0.00 0.00 0.00 2.83
3775 4326 7.085116 CACGACTCCATATCCTATCTAAACAC 58.915 42.308 0.00 0.00 0.00 3.32
3776 4327 6.776116 ACGACTCCATATCCTATCTAAACACA 59.224 38.462 0.00 0.00 0.00 3.72
3777 4328 7.287005 ACGACTCCATATCCTATCTAAACACAA 59.713 37.037 0.00 0.00 0.00 3.33
3778 4329 8.307483 CGACTCCATATCCTATCTAAACACAAT 58.693 37.037 0.00 0.00 0.00 2.71
3788 4339 9.916360 TCCTATCTAAACACAATACTACTCAGA 57.084 33.333 0.00 0.00 0.00 3.27
3792 4343 8.053026 TCTAAACACAATACTACTCAGAGTCC 57.947 38.462 6.27 0.00 0.00 3.85
3793 4344 6.665992 AAACACAATACTACTCAGAGTCCA 57.334 37.500 6.27 0.00 0.00 4.02
3794 4345 6.665992 AACACAATACTACTCAGAGTCCAA 57.334 37.500 6.27 0.00 0.00 3.53
3795 4346 6.026947 ACACAATACTACTCAGAGTCCAAC 57.973 41.667 6.27 0.00 0.00 3.77
3796 4347 5.775701 ACACAATACTACTCAGAGTCCAACT 59.224 40.000 6.27 0.00 0.00 3.16
3797 4348 6.096036 CACAATACTACTCAGAGTCCAACTG 58.904 44.000 6.27 3.54 36.80 3.16
3798 4349 5.775701 ACAATACTACTCAGAGTCCAACTGT 59.224 40.000 6.27 4.17 36.81 3.55
3799 4350 6.946583 ACAATACTACTCAGAGTCCAACTGTA 59.053 38.462 6.27 3.18 36.81 2.74
3800 4351 7.450634 ACAATACTACTCAGAGTCCAACTGTAA 59.549 37.037 6.27 0.00 36.81 2.41
3801 4352 5.708877 ACTACTCAGAGTCCAACTGTAAC 57.291 43.478 6.27 0.00 36.81 2.50
3802 4353 4.523558 ACTACTCAGAGTCCAACTGTAACC 59.476 45.833 6.27 0.00 36.81 2.85
3803 4354 3.577919 ACTCAGAGTCCAACTGTAACCT 58.422 45.455 0.00 0.00 36.81 3.50
3804 4355 4.737578 ACTCAGAGTCCAACTGTAACCTA 58.262 43.478 0.00 0.00 36.81 3.08
3805 4356 4.523558 ACTCAGAGTCCAACTGTAACCTAC 59.476 45.833 0.00 0.00 36.81 3.18
3806 4357 3.830755 TCAGAGTCCAACTGTAACCTACC 59.169 47.826 0.00 0.00 36.81 3.18
3807 4358 3.833070 CAGAGTCCAACTGTAACCTACCT 59.167 47.826 0.00 0.00 0.00 3.08
3808 4359 4.283722 CAGAGTCCAACTGTAACCTACCTT 59.716 45.833 0.00 0.00 0.00 3.50
3809 4360 4.283722 AGAGTCCAACTGTAACCTACCTTG 59.716 45.833 0.00 0.00 0.00 3.61
3810 4361 3.971971 AGTCCAACTGTAACCTACCTTGT 59.028 43.478 0.00 0.00 0.00 3.16
3811 4362 5.149976 AGTCCAACTGTAACCTACCTTGTA 58.850 41.667 0.00 0.00 0.00 2.41
3812 4363 5.011431 AGTCCAACTGTAACCTACCTTGTAC 59.989 44.000 0.00 0.00 0.00 2.90
3813 4364 4.900652 TCCAACTGTAACCTACCTTGTACA 59.099 41.667 0.00 0.00 0.00 2.90
3814 4365 5.544948 TCCAACTGTAACCTACCTTGTACAT 59.455 40.000 0.00 0.00 0.00 2.29
3815 4366 6.043474 TCCAACTGTAACCTACCTTGTACATT 59.957 38.462 0.00 0.00 0.00 2.71
3816 4367 7.235193 TCCAACTGTAACCTACCTTGTACATTA 59.765 37.037 0.00 0.00 0.00 1.90
3817 4368 8.044908 CCAACTGTAACCTACCTTGTACATTAT 58.955 37.037 0.00 0.00 0.00 1.28
3826 4377 9.609346 ACCTACCTTGTACATTATATTCAACAC 57.391 33.333 0.00 0.00 0.00 3.32
3827 4378 9.607988 CCTACCTTGTACATTATATTCAACACA 57.392 33.333 0.00 0.00 0.00 3.72
3830 4381 9.515226 ACCTTGTACATTATATTCAACACAACT 57.485 29.630 0.00 0.00 0.00 3.16
3831 4382 9.988350 CCTTGTACATTATATTCAACACAACTC 57.012 33.333 0.00 0.00 0.00 3.01
3832 4383 9.988350 CTTGTACATTATATTCAACACAACTCC 57.012 33.333 0.00 0.00 0.00 3.85
3833 4384 9.508642 TTGTACATTATATTCAACACAACTCCA 57.491 29.630 0.00 0.00 0.00 3.86
3834 4385 9.508642 TGTACATTATATTCAACACAACTCCAA 57.491 29.630 0.00 0.00 0.00 3.53
3835 4386 9.769093 GTACATTATATTCAACACAACTCCAAC 57.231 33.333 0.00 0.00 0.00 3.77
3836 4387 8.402798 ACATTATATTCAACACAACTCCAACA 57.597 30.769 0.00 0.00 0.00 3.33
3837 4388 8.855110 ACATTATATTCAACACAACTCCAACAA 58.145 29.630 0.00 0.00 0.00 2.83
3838 4389 9.689976 CATTATATTCAACACAACTCCAACAAA 57.310 29.630 0.00 0.00 0.00 2.83
3839 4390 9.691362 ATTATATTCAACACAACTCCAACAAAC 57.309 29.630 0.00 0.00 0.00 2.93
3840 4391 5.659440 ATTCAACACAACTCCAACAAACT 57.341 34.783 0.00 0.00 0.00 2.66
3841 4392 4.695217 TCAACACAACTCCAACAAACTC 57.305 40.909 0.00 0.00 0.00 3.01
3842 4393 3.442273 TCAACACAACTCCAACAAACTCC 59.558 43.478 0.00 0.00 0.00 3.85
3843 4394 3.080300 ACACAACTCCAACAAACTCCA 57.920 42.857 0.00 0.00 0.00 3.86
3844 4395 2.752903 ACACAACTCCAACAAACTCCAC 59.247 45.455 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 3.678717 CTTCACCGCCGTCGATCGT 62.679 63.158 15.94 0.00 38.10 3.73
99 100 2.094675 CCAAGCTCCATTTTGACCGAT 58.905 47.619 0.00 0.00 0.00 4.18
104 105 2.795329 GACCTCCAAGCTCCATTTTGA 58.205 47.619 0.00 0.00 0.00 2.69
105 106 1.470098 CGACCTCCAAGCTCCATTTTG 59.530 52.381 0.00 0.00 0.00 2.44
293 307 1.002134 CCAGGTTCCAGCCACGAAT 60.002 57.895 0.00 0.00 0.00 3.34
309 323 1.213296 GAAGGGAGGCCATTAGTCCA 58.787 55.000 5.01 0.00 31.31 4.02
317 331 2.610859 GGGACAGAAGGGAGGCCA 60.611 66.667 5.01 0.00 0.00 5.36
322 337 2.280552 CGAACCGGGACAGAAGGGA 61.281 63.158 6.32 0.00 0.00 4.20
357 374 4.839121 TCGCTTCTAACCCACATACATTT 58.161 39.130 0.00 0.00 0.00 2.32
370 387 0.908910 TCAATGGGCCTCGCTTCTAA 59.091 50.000 4.53 0.00 0.00 2.10
374 391 1.152881 GGATCAATGGGCCTCGCTT 60.153 57.895 4.53 0.00 0.00 4.68
395 412 1.207329 GTCCCAGTTCCTAGCACGAAT 59.793 52.381 0.00 0.00 0.00 3.34
403 420 2.307686 GACCCATTTGTCCCAGTTCCTA 59.692 50.000 0.00 0.00 0.00 2.94
494 512 1.217057 ATGAACTGGGCCCATGGAGT 61.217 55.000 28.82 17.72 0.00 3.85
496 515 1.213619 TCATGAACTGGGCCCATGGA 61.214 55.000 28.82 13.67 38.47 3.41
527 548 1.306296 GGTCTGGCCAGCCCATTAA 59.694 57.895 27.97 5.89 44.33 1.40
555 576 6.154706 CACCTGTCACTAGTAGAAAATAGGGT 59.845 42.308 3.59 0.92 0.00 4.34
576 597 5.582269 CGTATGTTTGATGAGTGATTCACCT 59.418 40.000 13.14 1.13 38.99 4.00
577 598 5.351465 ACGTATGTTTGATGAGTGATTCACC 59.649 40.000 13.14 5.86 38.99 4.02
578 599 6.408858 ACGTATGTTTGATGAGTGATTCAC 57.591 37.500 8.82 8.82 38.99 3.18
579 600 8.440059 GTTTACGTATGTTTGATGAGTGATTCA 58.560 33.333 0.00 0.00 40.85 2.57
580 601 8.656849 AGTTTACGTATGTTTGATGAGTGATTC 58.343 33.333 0.00 0.00 0.00 2.52
581 602 8.547967 AGTTTACGTATGTTTGATGAGTGATT 57.452 30.769 0.00 0.00 0.00 2.57
582 603 9.084164 GTAGTTTACGTATGTTTGATGAGTGAT 57.916 33.333 0.00 0.00 0.00 3.06
583 604 8.301720 AGTAGTTTACGTATGTTTGATGAGTGA 58.698 33.333 0.00 0.00 0.00 3.41
584 605 8.462143 AGTAGTTTACGTATGTTTGATGAGTG 57.538 34.615 0.00 0.00 0.00 3.51
585 606 7.484007 CGAGTAGTTTACGTATGTTTGATGAGT 59.516 37.037 0.00 0.00 0.00 3.41
586 607 7.044249 CCGAGTAGTTTACGTATGTTTGATGAG 60.044 40.741 0.00 0.00 0.00 2.90
587 608 6.748658 CCGAGTAGTTTACGTATGTTTGATGA 59.251 38.462 0.00 0.00 0.00 2.92
588 609 6.507456 GCCGAGTAGTTTACGTATGTTTGATG 60.507 42.308 0.00 0.00 0.00 3.07
589 610 5.517770 GCCGAGTAGTTTACGTATGTTTGAT 59.482 40.000 0.00 0.00 0.00 2.57
590 611 4.858692 GCCGAGTAGTTTACGTATGTTTGA 59.141 41.667 0.00 0.00 0.00 2.69
591 612 4.259135 CGCCGAGTAGTTTACGTATGTTTG 60.259 45.833 0.00 0.00 0.00 2.93
592 613 3.853671 CGCCGAGTAGTTTACGTATGTTT 59.146 43.478 0.00 0.00 0.00 2.83
593 614 3.429085 CGCCGAGTAGTTTACGTATGTT 58.571 45.455 0.00 0.00 0.00 2.71
594 615 2.792542 GCGCCGAGTAGTTTACGTATGT 60.793 50.000 0.00 0.00 0.00 2.29
595 616 1.777461 GCGCCGAGTAGTTTACGTATG 59.223 52.381 0.00 0.00 0.00 2.39
596 617 1.401552 TGCGCCGAGTAGTTTACGTAT 59.598 47.619 4.18 0.00 0.00 3.06
597 618 0.801872 TGCGCCGAGTAGTTTACGTA 59.198 50.000 4.18 0.00 0.00 3.57
598 619 0.171903 ATGCGCCGAGTAGTTTACGT 59.828 50.000 4.18 0.00 0.00 3.57
599 620 0.844503 GATGCGCCGAGTAGTTTACG 59.155 55.000 4.18 0.00 0.00 3.18
600 621 1.917273 TGATGCGCCGAGTAGTTTAC 58.083 50.000 4.18 0.00 0.00 2.01
601 622 2.658373 TTGATGCGCCGAGTAGTTTA 57.342 45.000 4.18 0.00 0.00 2.01
602 623 2.024176 ATTGATGCGCCGAGTAGTTT 57.976 45.000 4.18 0.00 0.00 2.66
603 624 2.864343 GTTATTGATGCGCCGAGTAGTT 59.136 45.455 4.18 0.00 0.00 2.24
604 625 2.159156 TGTTATTGATGCGCCGAGTAGT 60.159 45.455 4.18 0.00 0.00 2.73
605 626 2.469826 TGTTATTGATGCGCCGAGTAG 58.530 47.619 4.18 0.00 0.00 2.57
606 627 2.588027 TGTTATTGATGCGCCGAGTA 57.412 45.000 4.18 0.00 0.00 2.59
607 628 1.732941 TTGTTATTGATGCGCCGAGT 58.267 45.000 4.18 0.00 0.00 4.18
608 629 2.159585 TGTTTGTTATTGATGCGCCGAG 60.160 45.455 4.18 0.00 0.00 4.63
609 630 1.807142 TGTTTGTTATTGATGCGCCGA 59.193 42.857 4.18 0.00 0.00 5.54
610 631 2.176369 CTGTTTGTTATTGATGCGCCG 58.824 47.619 4.18 0.00 0.00 6.46
611 632 2.916716 CACTGTTTGTTATTGATGCGCC 59.083 45.455 4.18 0.00 0.00 6.53
612 633 2.342354 GCACTGTTTGTTATTGATGCGC 59.658 45.455 0.00 0.00 0.00 6.09
613 634 3.361644 GTGCACTGTTTGTTATTGATGCG 59.638 43.478 10.32 0.00 34.56 4.73
614 635 3.674753 GGTGCACTGTTTGTTATTGATGC 59.325 43.478 17.98 0.00 0.00 3.91
631 652 2.666862 CCGCTGGTTAACGGTGCA 60.667 61.111 13.67 0.00 44.46 4.57
647 668 5.467035 TTTTTGGTTCCTGTGAATGATCC 57.533 39.130 0.00 0.00 31.98 3.36
671 692 0.790814 CGAAGAAAAGACCACTCGCC 59.209 55.000 0.00 0.00 0.00 5.54
672 693 1.721926 CTCGAAGAAAAGACCACTCGC 59.278 52.381 0.00 0.00 34.09 5.03
673 694 2.329379 CCTCGAAGAAAAGACCACTCG 58.671 52.381 0.00 0.00 34.09 4.18
674 695 2.070028 GCCTCGAAGAAAAGACCACTC 58.930 52.381 0.00 0.00 34.09 3.51
675 696 1.416401 TGCCTCGAAGAAAAGACCACT 59.584 47.619 0.00 0.00 34.09 4.00
676 697 1.878953 TGCCTCGAAGAAAAGACCAC 58.121 50.000 0.00 0.00 34.09 4.16
716 739 0.029834 CAATAACATGCTGCCGAGGC 59.970 55.000 7.26 7.26 42.35 4.70
717 740 0.029834 GCAATAACATGCTGCCGAGG 59.970 55.000 0.00 0.00 43.06 4.63
732 755 3.438017 GAGCGAGGGAGCGAGCAAT 62.438 63.158 0.00 0.00 43.00 3.56
911 934 1.138671 GAGCTGACTCTGTCTCCGC 59.861 63.158 0.00 0.52 40.03 5.54
923 946 4.835615 ACTACTGAAAGGAAGAAGAGCTGA 59.164 41.667 0.00 0.00 39.30 4.26
1020 1051 2.469465 TTTCTCAGGCCAGCTTCGGG 62.469 60.000 5.01 0.00 0.00 5.14
1046 1077 1.135315 CACGCATAAGCAGTGCACC 59.865 57.895 19.20 0.00 42.62 5.01
1057 1088 3.198872 TCAGACAAAACACACACGCATA 58.801 40.909 0.00 0.00 0.00 3.14
1073 1104 0.809241 CTCAGCGCCTGGATTCAGAC 60.809 60.000 2.29 0.00 43.49 3.51
1264 1301 1.136984 GCAGTCGTCGTCGGAGAAT 59.863 57.895 1.55 0.00 39.69 2.40
1319 1356 2.757896 CACGATCAACAATGTACGTGC 58.242 47.619 16.64 0.00 43.39 5.34
1323 1360 3.100817 GCATGCACGATCAACAATGTAC 58.899 45.455 14.21 0.00 0.00 2.90
1324 1361 2.222999 CGCATGCACGATCAACAATGTA 60.223 45.455 19.57 0.00 34.06 2.29
1325 1362 1.466192 CGCATGCACGATCAACAATGT 60.466 47.619 19.57 0.00 34.06 2.71
1326 1363 1.185189 CGCATGCACGATCAACAATG 58.815 50.000 19.57 0.00 34.06 2.82
1327 1364 0.099259 CCGCATGCACGATCAACAAT 59.901 50.000 19.57 0.00 34.06 2.71
1332 1416 2.436469 AAGCCGCATGCACGATCA 60.436 55.556 19.57 0.00 44.83 2.92
1337 1421 2.126346 GAACCAAGCCGCATGCAC 60.126 61.111 19.57 9.19 44.83 4.57
1375 1459 4.623647 GCTCTCTTCTTCCAGCTTCTGAAT 60.624 45.833 0.00 0.00 32.44 2.57
1453 1537 4.639755 TGTCGGGACTAACATATTACGTGA 59.360 41.667 0.00 0.00 0.00 4.35
1460 1544 4.710375 ACTTGACTGTCGGGACTAACATAT 59.290 41.667 2.98 0.00 0.00 1.78
1461 1545 4.082408 CACTTGACTGTCGGGACTAACATA 60.082 45.833 2.98 0.00 0.00 2.29
1516 1607 0.808060 TGCACCACCGCATACATACG 60.808 55.000 0.00 0.00 36.86 3.06
1526 1617 2.047844 CAGAGACCTGCACCACCG 60.048 66.667 0.00 0.00 33.07 4.94
1969 2205 0.242017 GCGTACCTAGGTTGACGTGT 59.758 55.000 28.97 4.55 33.97 4.49
1988 2224 7.639850 CCAAACATACGTGCAAATAGATAAGTG 59.360 37.037 0.00 0.00 0.00 3.16
1991 2233 6.600032 ACCCAAACATACGTGCAAATAGATAA 59.400 34.615 0.00 0.00 0.00 1.75
1994 2236 4.328536 ACCCAAACATACGTGCAAATAGA 58.671 39.130 0.00 0.00 0.00 1.98
1996 2238 4.093115 CGTACCCAAACATACGTGCAAATA 59.907 41.667 0.00 0.00 39.42 1.40
1997 2239 3.120130 CGTACCCAAACATACGTGCAAAT 60.120 43.478 0.00 0.00 39.42 2.32
1998 2240 2.223611 CGTACCCAAACATACGTGCAAA 59.776 45.455 0.00 0.00 39.42 3.68
1999 2241 1.799403 CGTACCCAAACATACGTGCAA 59.201 47.619 0.00 0.00 39.42 4.08
2000 2242 1.430479 CGTACCCAAACATACGTGCA 58.570 50.000 0.00 0.00 39.42 4.57
2001 2243 0.722848 CCGTACCCAAACATACGTGC 59.277 55.000 0.00 0.00 42.03 5.34
2002 2244 2.264813 CTCCGTACCCAAACATACGTG 58.735 52.381 0.00 0.00 42.03 4.49
2003 2245 1.205417 CCTCCGTACCCAAACATACGT 59.795 52.381 0.00 0.00 42.03 3.57
2005 2247 1.556451 ACCCTCCGTACCCAAACATAC 59.444 52.381 0.00 0.00 0.00 2.39
2006 2248 1.832998 GACCCTCCGTACCCAAACATA 59.167 52.381 0.00 0.00 0.00 2.29
2007 2249 0.616891 GACCCTCCGTACCCAAACAT 59.383 55.000 0.00 0.00 0.00 2.71
2008 2250 0.472352 AGACCCTCCGTACCCAAACA 60.472 55.000 0.00 0.00 0.00 2.83
2010 2252 0.472352 ACAGACCCTCCGTACCCAAA 60.472 55.000 0.00 0.00 0.00 3.28
2011 2253 0.409092 TACAGACCCTCCGTACCCAA 59.591 55.000 0.00 0.00 0.00 4.12
2015 2257 1.666189 GTACGTACAGACCCTCCGTAC 59.334 57.143 20.67 0.00 44.45 3.67
2016 2258 1.406887 GGTACGTACAGACCCTCCGTA 60.407 57.143 26.02 0.00 33.32 4.02
2017 2259 0.678048 GGTACGTACAGACCCTCCGT 60.678 60.000 26.02 0.00 35.68 4.69
2018 2260 2.101700 GGTACGTACAGACCCTCCG 58.898 63.158 26.02 0.00 0.00 4.63
2047 2297 1.608590 CACAACCACCACACAAGATCC 59.391 52.381 0.00 0.00 0.00 3.36
2050 2304 1.372838 CGCACAACCACCACACAAGA 61.373 55.000 0.00 0.00 0.00 3.02
2188 2451 6.019640 GGCAAAACGATGATTAACCATCAATG 60.020 38.462 10.48 4.19 45.45 2.82
2195 2458 4.743493 ACATGGCAAAACGATGATTAACC 58.257 39.130 0.00 0.00 37.86 2.85
2196 2459 5.398169 TGACATGGCAAAACGATGATTAAC 58.602 37.500 0.00 0.00 37.86 2.01
2199 2462 4.724074 ATGACATGGCAAAACGATGATT 57.276 36.364 4.70 0.00 37.86 2.57
2201 2464 4.484236 GAAATGACATGGCAAAACGATGA 58.516 39.130 4.70 0.00 37.86 2.92
2203 2466 3.500982 CGAAATGACATGGCAAAACGAT 58.499 40.909 4.70 0.00 0.00 3.73
2223 2486 1.280886 GCCATAGCGACAGATCAGCG 61.281 60.000 0.00 0.00 35.78 5.18
2224 2487 0.948141 GGCCATAGCGACAGATCAGC 60.948 60.000 0.00 0.00 41.24 4.26
2225 2488 0.390492 TGGCCATAGCGACAGATCAG 59.610 55.000 0.00 0.00 41.24 2.90
2226 2489 1.051008 ATGGCCATAGCGACAGATCA 58.949 50.000 19.18 0.00 41.24 2.92
2227 2490 1.436600 CATGGCCATAGCGACAGATC 58.563 55.000 20.30 0.00 41.24 2.75
2228 2491 0.035881 CCATGGCCATAGCGACAGAT 59.964 55.000 20.30 0.00 41.24 2.90
2230 2493 1.598962 CCCATGGCCATAGCGACAG 60.599 63.158 20.30 3.68 41.24 3.51
2231 2494 2.374525 ACCCATGGCCATAGCGACA 61.375 57.895 20.30 0.00 41.24 4.35
2232 2495 1.893808 CACCCATGGCCATAGCGAC 60.894 63.158 20.30 0.00 41.24 5.19
2233 2496 2.510411 CACCCATGGCCATAGCGA 59.490 61.111 20.30 0.00 41.24 4.93
2234 2497 3.289834 GCACCCATGGCCATAGCG 61.290 66.667 20.30 11.07 41.24 4.26
2235 2498 3.289834 CGCACCCATGGCCATAGC 61.290 66.667 20.30 18.26 38.76 2.97
2285 2554 0.685097 CCCCGAACTTCCAAGACTCA 59.315 55.000 0.00 0.00 0.00 3.41
2402 2671 6.479972 TCATTTACCCTAGGATGTACTGTG 57.520 41.667 11.48 4.26 0.00 3.66
2403 2672 7.076446 AGATCATTTACCCTAGGATGTACTGT 58.924 38.462 11.48 0.00 0.00 3.55
2457 2726 2.919859 GCATCCATCATCATACGACGAG 59.080 50.000 0.00 0.00 0.00 4.18
2670 2939 1.945819 GCATGCACGGAGAAGGAGAAA 60.946 52.381 14.21 0.00 0.00 2.52
2853 3122 3.849951 CGACATCACGGGGAGGGG 61.850 72.222 0.00 0.00 0.00 4.79
2856 3125 1.884075 TTGGTCGACATCACGGGGAG 61.884 60.000 18.91 0.00 0.00 4.30
2857 3126 1.884075 CTTGGTCGACATCACGGGGA 61.884 60.000 18.91 0.00 0.00 4.81
2861 3130 0.670546 AAGGCTTGGTCGACATCACG 60.671 55.000 18.91 5.93 0.00 4.35
2862 3131 0.798776 CAAGGCTTGGTCGACATCAC 59.201 55.000 19.55 3.57 0.00 3.06
2863 3132 0.396435 ACAAGGCTTGGTCGACATCA 59.604 50.000 29.26 3.92 34.12 3.07
2864 3133 1.523758 AACAAGGCTTGGTCGACATC 58.476 50.000 29.26 0.81 34.12 3.06
2865 3134 2.224426 TGTAACAAGGCTTGGTCGACAT 60.224 45.455 29.26 5.32 34.12 3.06
2986 3259 0.326264 ACCACCAGATGCTCTGTTCC 59.674 55.000 10.86 0.00 42.80 3.62
3025 3298 7.761249 CCTCCAAAGCTTAATAAAAAGACATGG 59.239 37.037 0.00 0.00 0.00 3.66
3151 3684 0.250124 ATTCGTCCACGGCAGTTTGA 60.250 50.000 0.00 0.00 40.29 2.69
3252 3803 2.430332 GAGGAGGACACATGAAGAGGAG 59.570 54.545 0.00 0.00 0.00 3.69
3261 3812 0.921896 CCCCATTGAGGAGGACACAT 59.078 55.000 0.00 0.00 41.22 3.21
3406 3957 4.095483 GCCACACCATCTAATCTTGTGAAG 59.905 45.833 1.64 0.00 40.02 3.02
3457 4008 2.056577 GACAAAAACAGCAGCAGCATC 58.943 47.619 3.17 0.00 45.49 3.91
3484 4035 2.350580 GGTCCTCGGATAATCGACGAAG 60.351 54.545 0.00 0.00 36.08 3.79
3485 4036 1.605710 GGTCCTCGGATAATCGACGAA 59.394 52.381 0.00 0.00 36.08 3.85
3486 4037 1.233019 GGTCCTCGGATAATCGACGA 58.767 55.000 0.00 0.00 35.18 4.20
3487 4038 0.949397 TGGTCCTCGGATAATCGACG 59.051 55.000 0.00 0.00 35.18 5.12
3488 4039 2.862921 GCTTGGTCCTCGGATAATCGAC 60.863 54.545 0.00 0.00 35.18 4.20
3489 4040 1.340248 GCTTGGTCCTCGGATAATCGA 59.660 52.381 0.00 0.00 37.60 3.59
3490 4041 1.068588 TGCTTGGTCCTCGGATAATCG 59.931 52.381 0.00 0.00 0.00 3.34
3491 4042 2.910688 TGCTTGGTCCTCGGATAATC 57.089 50.000 0.00 0.00 0.00 1.75
3492 4043 3.136443 TGATTGCTTGGTCCTCGGATAAT 59.864 43.478 0.00 0.00 0.00 1.28
3493 4044 2.503765 TGATTGCTTGGTCCTCGGATAA 59.496 45.455 0.00 0.00 0.00 1.75
3494 4045 2.115427 TGATTGCTTGGTCCTCGGATA 58.885 47.619 0.00 0.00 0.00 2.59
3495 4046 0.911769 TGATTGCTTGGTCCTCGGAT 59.088 50.000 0.00 0.00 0.00 4.18
3496 4047 0.036388 GTGATTGCTTGGTCCTCGGA 60.036 55.000 0.00 0.00 0.00 4.55
3497 4048 0.321564 TGTGATTGCTTGGTCCTCGG 60.322 55.000 0.00 0.00 0.00 4.63
3498 4049 0.798776 GTGTGATTGCTTGGTCCTCG 59.201 55.000 0.00 0.00 0.00 4.63
3499 4050 0.798776 CGTGTGATTGCTTGGTCCTC 59.201 55.000 0.00 0.00 0.00 3.71
3500 4051 0.396435 TCGTGTGATTGCTTGGTCCT 59.604 50.000 0.00 0.00 0.00 3.85
3501 4052 0.798776 CTCGTGTGATTGCTTGGTCC 59.201 55.000 0.00 0.00 0.00 4.46
3502 4053 0.166814 GCTCGTGTGATTGCTTGGTC 59.833 55.000 0.00 0.00 0.00 4.02
3503 4054 0.534877 TGCTCGTGTGATTGCTTGGT 60.535 50.000 0.00 0.00 0.00 3.67
3504 4055 0.592637 TTGCTCGTGTGATTGCTTGG 59.407 50.000 0.00 0.00 0.00 3.61
3505 4056 1.532437 TCTTGCTCGTGTGATTGCTTG 59.468 47.619 0.00 0.00 0.00 4.01
3506 4057 1.532868 GTCTTGCTCGTGTGATTGCTT 59.467 47.619 0.00 0.00 0.00 3.91
3507 4058 1.151668 GTCTTGCTCGTGTGATTGCT 58.848 50.000 0.00 0.00 0.00 3.91
3508 4059 0.867746 TGTCTTGCTCGTGTGATTGC 59.132 50.000 0.00 0.00 0.00 3.56
3509 4060 2.222663 CGATGTCTTGCTCGTGTGATTG 60.223 50.000 0.00 0.00 0.00 2.67
3510 4061 1.995484 CGATGTCTTGCTCGTGTGATT 59.005 47.619 0.00 0.00 0.00 2.57
3511 4062 1.202348 TCGATGTCTTGCTCGTGTGAT 59.798 47.619 0.00 0.00 36.33 3.06
3512 4063 0.596082 TCGATGTCTTGCTCGTGTGA 59.404 50.000 0.00 0.00 36.33 3.58
3513 4064 0.987715 CTCGATGTCTTGCTCGTGTG 59.012 55.000 0.00 0.00 36.33 3.82
3514 4065 0.881796 TCTCGATGTCTTGCTCGTGT 59.118 50.000 0.00 0.00 36.33 4.49
3515 4066 2.200792 ATCTCGATGTCTTGCTCGTG 57.799 50.000 0.00 0.00 36.33 4.35
3516 4067 2.926200 CAAATCTCGATGTCTTGCTCGT 59.074 45.455 0.00 0.00 36.33 4.18
3517 4068 2.926200 ACAAATCTCGATGTCTTGCTCG 59.074 45.455 0.00 0.00 36.25 5.03
3518 4069 4.935885 AACAAATCTCGATGTCTTGCTC 57.064 40.909 0.00 0.00 0.00 4.26
3519 4070 5.163953 CGTTAACAAATCTCGATGTCTTGCT 60.164 40.000 6.39 0.00 0.00 3.91
3520 4071 5.015733 CGTTAACAAATCTCGATGTCTTGC 58.984 41.667 6.39 0.00 0.00 4.01
3521 4072 6.389622 TCGTTAACAAATCTCGATGTCTTG 57.610 37.500 6.39 0.00 0.00 3.02
3522 4073 5.577164 CCTCGTTAACAAATCTCGATGTCTT 59.423 40.000 6.39 0.00 0.00 3.01
3523 4074 5.103000 CCTCGTTAACAAATCTCGATGTCT 58.897 41.667 6.39 0.00 0.00 3.41
3524 4075 4.863131 ACCTCGTTAACAAATCTCGATGTC 59.137 41.667 6.39 0.00 0.00 3.06
3525 4076 4.817517 ACCTCGTTAACAAATCTCGATGT 58.182 39.130 6.39 0.00 0.00 3.06
3526 4077 5.347635 TGAACCTCGTTAACAAATCTCGATG 59.652 40.000 6.39 0.00 0.00 3.84
3527 4078 5.475719 TGAACCTCGTTAACAAATCTCGAT 58.524 37.500 6.39 0.00 0.00 3.59
3528 4079 4.873817 TGAACCTCGTTAACAAATCTCGA 58.126 39.130 6.39 0.00 0.00 4.04
3529 4080 5.498700 CGATGAACCTCGTTAACAAATCTCG 60.499 44.000 6.39 0.25 34.00 4.04
3530 4081 5.575606 TCGATGAACCTCGTTAACAAATCTC 59.424 40.000 6.39 0.00 39.62 2.75
3531 4082 5.475719 TCGATGAACCTCGTTAACAAATCT 58.524 37.500 6.39 0.00 39.62 2.40
3532 4083 5.773239 TCGATGAACCTCGTTAACAAATC 57.227 39.130 6.39 0.00 39.62 2.17
3533 4084 7.709182 TCATATCGATGAACCTCGTTAACAAAT 59.291 33.333 8.54 0.00 39.20 2.32
3534 4085 7.009815 GTCATATCGATGAACCTCGTTAACAAA 59.990 37.037 8.54 0.00 43.77 2.83
3535 4086 6.474427 GTCATATCGATGAACCTCGTTAACAA 59.526 38.462 8.54 0.00 43.77 2.83
3536 4087 5.975344 GTCATATCGATGAACCTCGTTAACA 59.025 40.000 8.54 0.00 43.77 2.41
3537 4088 6.207213 AGTCATATCGATGAACCTCGTTAAC 58.793 40.000 8.54 0.00 43.77 2.01
3538 4089 6.387041 AGTCATATCGATGAACCTCGTTAA 57.613 37.500 8.54 0.00 43.77 2.01
3539 4090 6.484308 TGTAGTCATATCGATGAACCTCGTTA 59.516 38.462 8.54 0.00 43.77 3.18
3540 4091 4.920640 AGTCATATCGATGAACCTCGTT 57.079 40.909 8.54 0.00 43.77 3.85
3541 4092 4.820173 TGTAGTCATATCGATGAACCTCGT 59.180 41.667 8.54 0.00 43.77 4.18
3542 4093 5.358298 TGTAGTCATATCGATGAACCTCG 57.642 43.478 8.54 0.00 43.77 4.63
3543 4094 7.094334 TGGTATGTAGTCATATCGATGAACCTC 60.094 40.741 8.54 1.05 43.77 3.85
3544 4095 6.719829 TGGTATGTAGTCATATCGATGAACCT 59.280 38.462 8.54 1.60 43.77 3.50
3545 4096 6.920817 TGGTATGTAGTCATATCGATGAACC 58.079 40.000 8.54 3.47 43.77 3.62
3546 4097 7.542477 CCTTGGTATGTAGTCATATCGATGAAC 59.458 40.741 8.54 3.40 43.77 3.18
3547 4098 7.602753 CCTTGGTATGTAGTCATATCGATGAA 58.397 38.462 8.54 0.00 43.77 2.57
3548 4099 6.350194 GCCTTGGTATGTAGTCATATCGATGA 60.350 42.308 8.54 0.00 39.69 2.92
3549 4100 5.807520 GCCTTGGTATGTAGTCATATCGATG 59.192 44.000 8.54 0.00 39.69 3.84
3550 4101 5.717178 AGCCTTGGTATGTAGTCATATCGAT 59.283 40.000 2.16 2.16 39.69 3.59
3551 4102 5.048013 CAGCCTTGGTATGTAGTCATATCGA 60.048 44.000 0.00 0.00 39.69 3.59
3552 4103 5.048013 TCAGCCTTGGTATGTAGTCATATCG 60.048 44.000 0.00 0.00 39.69 2.92
3553 4104 6.015010 AGTCAGCCTTGGTATGTAGTCATATC 60.015 42.308 0.00 0.00 38.56 1.63
3554 4105 5.841237 AGTCAGCCTTGGTATGTAGTCATAT 59.159 40.000 0.00 0.00 38.56 1.78
3555 4106 5.208890 AGTCAGCCTTGGTATGTAGTCATA 58.791 41.667 0.00 0.00 35.70 2.15
3556 4107 4.033709 AGTCAGCCTTGGTATGTAGTCAT 58.966 43.478 0.00 0.00 38.00 3.06
3557 4108 3.441101 AGTCAGCCTTGGTATGTAGTCA 58.559 45.455 0.00 0.00 0.00 3.41
3558 4109 5.509840 CCATAGTCAGCCTTGGTATGTAGTC 60.510 48.000 0.00 0.00 0.00 2.59
3559 4110 4.345257 CCATAGTCAGCCTTGGTATGTAGT 59.655 45.833 0.00 0.00 0.00 2.73
3560 4111 4.262635 CCCATAGTCAGCCTTGGTATGTAG 60.263 50.000 0.00 0.00 0.00 2.74
3561 4112 3.646162 CCCATAGTCAGCCTTGGTATGTA 59.354 47.826 0.00 0.00 0.00 2.29
3562 4113 2.439507 CCCATAGTCAGCCTTGGTATGT 59.560 50.000 0.00 0.00 0.00 2.29
3563 4114 2.811873 GCCCATAGTCAGCCTTGGTATG 60.812 54.545 0.00 0.00 0.00 2.39
3564 4115 1.421646 GCCCATAGTCAGCCTTGGTAT 59.578 52.381 0.00 0.00 0.00 2.73
3565 4116 0.837272 GCCCATAGTCAGCCTTGGTA 59.163 55.000 0.00 0.00 0.00 3.25
3566 4117 1.609783 GCCCATAGTCAGCCTTGGT 59.390 57.895 0.00 0.00 0.00 3.67
3567 4118 1.524621 CGCCCATAGTCAGCCTTGG 60.525 63.158 0.00 0.00 0.00 3.61
3568 4119 2.182842 GCGCCCATAGTCAGCCTTG 61.183 63.158 0.00 0.00 0.00 3.61
3569 4120 2.190578 GCGCCCATAGTCAGCCTT 59.809 61.111 0.00 0.00 0.00 4.35
3570 4121 2.765807 AGCGCCCATAGTCAGCCT 60.766 61.111 2.29 0.00 0.00 4.58
3571 4122 2.280457 GAGCGCCCATAGTCAGCC 60.280 66.667 2.29 0.00 0.00 4.85
3572 4123 2.280457 GGAGCGCCCATAGTCAGC 60.280 66.667 2.29 0.00 34.14 4.26
3573 4124 0.179000 AAAGGAGCGCCCATAGTCAG 59.821 55.000 15.92 0.00 37.41 3.51
3574 4125 0.178068 GAAAGGAGCGCCCATAGTCA 59.822 55.000 15.92 0.00 37.41 3.41
3575 4126 0.533085 GGAAAGGAGCGCCCATAGTC 60.533 60.000 15.92 0.69 37.41 2.59
3576 4127 1.271840 TGGAAAGGAGCGCCCATAGT 61.272 55.000 15.92 0.00 37.41 2.12
3577 4128 0.109342 ATGGAAAGGAGCGCCCATAG 59.891 55.000 11.31 0.00 37.61 2.23
3578 4129 0.179020 CATGGAAAGGAGCGCCCATA 60.179 55.000 12.41 0.00 37.30 2.74
3579 4130 1.454479 CATGGAAAGGAGCGCCCAT 60.454 57.895 15.92 11.96 39.80 4.00
3580 4131 2.045045 CATGGAAAGGAGCGCCCA 60.045 61.111 15.92 10.17 37.41 5.36
3581 4132 2.115291 GTCATGGAAAGGAGCGCCC 61.115 63.158 2.29 5.07 33.31 6.13
3582 4133 1.377202 TGTCATGGAAAGGAGCGCC 60.377 57.895 2.29 0.00 0.00 6.53
3583 4134 1.648467 GGTGTCATGGAAAGGAGCGC 61.648 60.000 0.00 0.00 0.00 5.92
3584 4135 1.361668 CGGTGTCATGGAAAGGAGCG 61.362 60.000 0.00 0.00 0.00 5.03
3585 4136 1.648467 GCGGTGTCATGGAAAGGAGC 61.648 60.000 0.00 0.00 0.00 4.70
3586 4137 0.036010 AGCGGTGTCATGGAAAGGAG 60.036 55.000 0.00 0.00 0.00 3.69
3587 4138 1.066430 GTAGCGGTGTCATGGAAAGGA 60.066 52.381 0.00 0.00 0.00 3.36
3588 4139 1.338674 TGTAGCGGTGTCATGGAAAGG 60.339 52.381 0.00 0.00 0.00 3.11
3589 4140 2.093306 TGTAGCGGTGTCATGGAAAG 57.907 50.000 0.00 0.00 0.00 2.62
3590 4141 2.552599 TTGTAGCGGTGTCATGGAAA 57.447 45.000 0.00 0.00 0.00 3.13
3591 4142 2.779755 ATTGTAGCGGTGTCATGGAA 57.220 45.000 0.00 0.00 0.00 3.53
3592 4143 2.159014 GGTATTGTAGCGGTGTCATGGA 60.159 50.000 0.00 0.00 0.00 3.41
3593 4144 2.210116 GGTATTGTAGCGGTGTCATGG 58.790 52.381 0.00 0.00 0.00 3.66
3594 4145 1.858458 CGGTATTGTAGCGGTGTCATG 59.142 52.381 0.00 0.00 45.08 3.07
3595 4146 2.218953 CGGTATTGTAGCGGTGTCAT 57.781 50.000 0.00 0.00 45.08 3.06
3596 4147 3.725485 CGGTATTGTAGCGGTGTCA 57.275 52.632 0.00 0.00 45.08 3.58
3603 4154 1.947642 CCGGACGCGGTATTGTAGC 60.948 63.158 12.47 0.00 0.00 3.58
3604 4155 0.593263 GACCGGACGCGGTATTGTAG 60.593 60.000 9.46 0.00 43.07 2.74
3605 4156 1.433064 GACCGGACGCGGTATTGTA 59.567 57.895 9.46 0.00 43.07 2.41
3606 4157 2.182537 GACCGGACGCGGTATTGT 59.817 61.111 9.46 0.00 43.07 2.71
3607 4158 2.952783 CGACCGGACGCGGTATTG 60.953 66.667 14.33 0.00 43.07 1.90
3608 4159 3.401243 GACGACCGGACGCGGTATT 62.401 63.158 25.79 5.34 43.07 1.89
3609 4160 3.880846 GACGACCGGACGCGGTAT 61.881 66.667 25.79 6.14 43.07 2.73
3615 4166 4.112341 GTCCAGGACGACCGGACG 62.112 72.222 24.38 24.38 43.69 4.79
3649 4200 4.265056 AACAACGCGGGGGAAGCT 62.265 61.111 12.47 0.00 0.00 3.74
3650 4201 4.038080 CAACAACGCGGGGGAAGC 62.038 66.667 12.47 0.00 0.00 3.86
3651 4202 2.593436 ACAACAACGCGGGGGAAG 60.593 61.111 12.47 0.00 0.00 3.46
3652 4203 2.902846 CACAACAACGCGGGGGAA 60.903 61.111 12.47 0.00 0.00 3.97
3655 4206 2.691674 AATTGCACAACAACGCGGGG 62.692 55.000 12.47 4.01 42.27 5.73
3656 4207 0.039978 TAATTGCACAACAACGCGGG 60.040 50.000 12.47 4.46 42.27 6.13
3657 4208 1.648191 CATAATTGCACAACAACGCGG 59.352 47.619 12.47 0.00 42.27 6.46
3658 4209 2.315011 ACATAATTGCACAACAACGCG 58.685 42.857 3.53 3.53 42.27 6.01
3659 4210 3.121058 CCAACATAATTGCACAACAACGC 60.121 43.478 0.00 0.00 42.27 4.84
3660 4211 3.121058 GCCAACATAATTGCACAACAACG 60.121 43.478 0.00 0.00 42.27 4.10
3661 4212 3.806521 TGCCAACATAATTGCACAACAAC 59.193 39.130 0.00 0.00 42.27 3.32
3662 4213 4.063998 TGCCAACATAATTGCACAACAA 57.936 36.364 0.00 0.00 44.01 2.83
3663 4214 3.740631 TGCCAACATAATTGCACAACA 57.259 38.095 0.00 0.00 0.00 3.33
3664 4215 4.805192 CCTATGCCAACATAATTGCACAAC 59.195 41.667 0.00 0.00 38.29 3.32
3665 4216 4.465660 ACCTATGCCAACATAATTGCACAA 59.534 37.500 0.00 0.00 38.29 3.33
3666 4217 4.022603 ACCTATGCCAACATAATTGCACA 58.977 39.130 0.00 0.00 38.29 4.57
3667 4218 4.654091 ACCTATGCCAACATAATTGCAC 57.346 40.909 0.00 0.00 38.29 4.57
3668 4219 5.654209 TGTAACCTATGCCAACATAATTGCA 59.346 36.000 0.00 0.00 38.29 4.08
3669 4220 6.142818 TGTAACCTATGCCAACATAATTGC 57.857 37.500 0.00 0.00 38.29 3.56
3670 4221 7.077605 CGATGTAACCTATGCCAACATAATTG 58.922 38.462 0.00 0.00 38.29 2.32
3671 4222 6.770785 ACGATGTAACCTATGCCAACATAATT 59.229 34.615 0.00 0.00 38.29 1.40
3672 4223 6.204688 CACGATGTAACCTATGCCAACATAAT 59.795 38.462 0.00 0.00 38.29 1.28
3673 4224 5.525745 CACGATGTAACCTATGCCAACATAA 59.474 40.000 0.00 0.00 38.29 1.90
3674 4225 5.053811 CACGATGTAACCTATGCCAACATA 58.946 41.667 0.00 0.00 37.74 2.29
3675 4226 3.876914 CACGATGTAACCTATGCCAACAT 59.123 43.478 0.00 0.00 40.49 2.71
3676 4227 3.266636 CACGATGTAACCTATGCCAACA 58.733 45.455 0.00 0.00 0.00 3.33
3677 4228 3.063452 CACACGATGTAACCTATGCCAAC 59.937 47.826 0.00 0.00 0.00 3.77
3678 4229 3.266636 CACACGATGTAACCTATGCCAA 58.733 45.455 0.00 0.00 0.00 4.52
3679 4230 2.235155 ACACACGATGTAACCTATGCCA 59.765 45.455 0.00 0.00 40.88 4.92
3680 4231 2.864343 GACACACGATGTAACCTATGCC 59.136 50.000 0.00 0.00 43.56 4.40
3681 4232 3.782046 AGACACACGATGTAACCTATGC 58.218 45.455 0.00 0.00 43.56 3.14
3682 4233 5.279384 GGTAGACACACGATGTAACCTATG 58.721 45.833 15.25 0.00 43.56 2.23
3683 4234 4.340381 GGGTAGACACACGATGTAACCTAT 59.660 45.833 18.81 0.00 43.56 2.57
3684 4235 3.696051 GGGTAGACACACGATGTAACCTA 59.304 47.826 18.81 7.47 43.56 3.08
3685 4236 2.494870 GGGTAGACACACGATGTAACCT 59.505 50.000 18.81 8.15 43.56 3.50
3686 4237 2.494870 AGGGTAGACACACGATGTAACC 59.505 50.000 14.65 14.65 43.56 2.85
3687 4238 3.730061 CGAGGGTAGACACACGATGTAAC 60.730 52.174 0.00 0.00 43.56 2.50
3688 4239 2.421073 CGAGGGTAGACACACGATGTAA 59.579 50.000 0.00 0.00 43.56 2.41
3689 4240 2.011947 CGAGGGTAGACACACGATGTA 58.988 52.381 0.00 0.00 43.56 2.29
3691 4242 1.092348 TCGAGGGTAGACACACGATG 58.908 55.000 0.08 0.00 31.29 3.84
3692 4243 2.054232 ATCGAGGGTAGACACACGAT 57.946 50.000 10.84 10.84 34.59 3.73
3693 4244 2.696989 TATCGAGGGTAGACACACGA 57.303 50.000 6.90 6.90 31.29 4.35
3694 4245 6.537660 TCATATATATCGAGGGTAGACACACG 59.462 42.308 0.00 0.00 31.29 4.49
3695 4246 7.860918 TCATATATATCGAGGGTAGACACAC 57.139 40.000 0.00 0.00 0.00 3.82
3696 4247 8.873186 TTTCATATATATCGAGGGTAGACACA 57.127 34.615 0.00 0.00 0.00 3.72
3697 4248 9.175312 TCTTTCATATATATCGAGGGTAGACAC 57.825 37.037 0.00 0.00 0.00 3.67
3698 4249 9.175312 GTCTTTCATATATATCGAGGGTAGACA 57.825 37.037 0.00 0.00 0.00 3.41
3699 4250 8.623030 GGTCTTTCATATATATCGAGGGTAGAC 58.377 40.741 0.00 0.00 0.00 2.59
3700 4251 8.558312 AGGTCTTTCATATATATCGAGGGTAGA 58.442 37.037 0.00 0.00 0.00 2.59
3701 4252 8.754991 AGGTCTTTCATATATATCGAGGGTAG 57.245 38.462 0.00 0.00 0.00 3.18
3702 4253 9.848710 CTAGGTCTTTCATATATATCGAGGGTA 57.151 37.037 0.00 0.00 0.00 3.69
3703 4254 7.780745 CCTAGGTCTTTCATATATATCGAGGGT 59.219 40.741 0.00 0.00 0.00 4.34
3704 4255 7.999545 TCCTAGGTCTTTCATATATATCGAGGG 59.000 40.741 9.08 0.00 0.00 4.30
3705 4256 8.982091 TCCTAGGTCTTTCATATATATCGAGG 57.018 38.462 9.08 0.00 0.00 4.63
3715 4266 9.310449 GGACACTTATATCCTAGGTCTTTCATA 57.690 37.037 9.08 0.00 31.75 2.15
3716 4267 8.013667 AGGACACTTATATCCTAGGTCTTTCAT 58.986 37.037 9.08 0.00 43.85 2.57
3717 4268 7.363031 AGGACACTTATATCCTAGGTCTTTCA 58.637 38.462 9.08 0.00 43.85 2.69
3718 4269 7.842887 AGGACACTTATATCCTAGGTCTTTC 57.157 40.000 9.08 0.00 43.85 2.62
3719 4270 8.512813 AGTAGGACACTTATATCCTAGGTCTTT 58.487 37.037 9.08 0.00 46.10 2.52
3720 4271 8.059565 AGTAGGACACTTATATCCTAGGTCTT 57.940 38.462 9.08 0.00 46.10 3.01
3721 4272 7.651229 AGTAGGACACTTATATCCTAGGTCT 57.349 40.000 9.08 0.00 46.10 3.85
3722 4273 8.048514 CCTAGTAGGACACTTATATCCTAGGTC 58.951 44.444 11.09 0.00 46.10 3.85
3723 4274 7.743139 TCCTAGTAGGACACTTATATCCTAGGT 59.257 40.741 15.33 0.00 46.10 3.08
3724 4275 8.160434 TCCTAGTAGGACACTTATATCCTAGG 57.840 42.308 15.33 0.82 46.10 3.02
3739 4290 1.911357 TGGAGTCGTGTCCTAGTAGGA 59.089 52.381 15.33 15.33 43.43 2.94
3740 4291 2.414994 TGGAGTCGTGTCCTAGTAGG 57.585 55.000 10.24 10.24 37.52 3.18
3741 4292 4.696402 GGATATGGAGTCGTGTCCTAGTAG 59.304 50.000 7.24 0.00 37.26 2.57
3742 4293 4.350225 AGGATATGGAGTCGTGTCCTAGTA 59.650 45.833 9.72 0.24 45.13 1.82
3743 4294 3.138653 AGGATATGGAGTCGTGTCCTAGT 59.861 47.826 9.72 0.00 45.13 2.57
3744 4295 3.757270 AGGATATGGAGTCGTGTCCTAG 58.243 50.000 9.72 0.00 45.13 3.02
3745 4296 3.878237 AGGATATGGAGTCGTGTCCTA 57.122 47.619 9.72 0.00 45.13 2.94
3746 4297 2.757894 AGGATATGGAGTCGTGTCCT 57.242 50.000 6.63 6.63 43.11 3.85
3747 4298 4.337145 AGATAGGATATGGAGTCGTGTCC 58.663 47.826 2.82 2.82 39.58 4.02
3748 4299 7.040617 TGTTTAGATAGGATATGGAGTCGTGTC 60.041 40.741 0.00 0.00 0.00 3.67
3749 4300 6.776116 TGTTTAGATAGGATATGGAGTCGTGT 59.224 38.462 0.00 0.00 0.00 4.49
3750 4301 7.085116 GTGTTTAGATAGGATATGGAGTCGTG 58.915 42.308 0.00 0.00 0.00 4.35
3751 4302 6.776116 TGTGTTTAGATAGGATATGGAGTCGT 59.224 38.462 0.00 0.00 0.00 4.34
3752 4303 7.215719 TGTGTTTAGATAGGATATGGAGTCG 57.784 40.000 0.00 0.00 0.00 4.18
3762 4313 9.916360 TCTGAGTAGTATTGTGTTTAGATAGGA 57.084 33.333 0.00 0.00 0.00 2.94
3766 4317 8.688151 GGACTCTGAGTAGTATTGTGTTTAGAT 58.312 37.037 10.86 0.00 0.00 1.98
3767 4318 7.668469 TGGACTCTGAGTAGTATTGTGTTTAGA 59.332 37.037 10.86 0.00 0.00 2.10
3768 4319 7.827701 TGGACTCTGAGTAGTATTGTGTTTAG 58.172 38.462 10.86 0.00 0.00 1.85
3769 4320 7.770366 TGGACTCTGAGTAGTATTGTGTTTA 57.230 36.000 10.86 0.00 0.00 2.01
3770 4321 6.665992 TGGACTCTGAGTAGTATTGTGTTT 57.334 37.500 10.86 0.00 0.00 2.83
3771 4322 6.267928 AGTTGGACTCTGAGTAGTATTGTGTT 59.732 38.462 10.86 0.00 0.00 3.32
3772 4323 5.775701 AGTTGGACTCTGAGTAGTATTGTGT 59.224 40.000 10.86 0.00 0.00 3.72
3773 4324 6.096036 CAGTTGGACTCTGAGTAGTATTGTG 58.904 44.000 10.86 0.00 35.20 3.33
3774 4325 5.775701 ACAGTTGGACTCTGAGTAGTATTGT 59.224 40.000 10.86 10.02 36.81 2.71
3775 4326 6.274157 ACAGTTGGACTCTGAGTAGTATTG 57.726 41.667 10.86 9.43 36.81 1.90
3776 4327 7.093858 GGTTACAGTTGGACTCTGAGTAGTATT 60.094 40.741 10.86 0.00 36.81 1.89
3777 4328 6.377712 GGTTACAGTTGGACTCTGAGTAGTAT 59.622 42.308 10.86 0.00 36.81 2.12
3778 4329 5.709164 GGTTACAGTTGGACTCTGAGTAGTA 59.291 44.000 10.86 4.80 36.81 1.82
3779 4330 4.523558 GGTTACAGTTGGACTCTGAGTAGT 59.476 45.833 10.86 5.68 36.81 2.73
3780 4331 4.767928 AGGTTACAGTTGGACTCTGAGTAG 59.232 45.833 10.86 0.00 36.81 2.57
3781 4332 4.737578 AGGTTACAGTTGGACTCTGAGTA 58.262 43.478 10.86 0.00 36.81 2.59
3782 4333 3.577919 AGGTTACAGTTGGACTCTGAGT 58.422 45.455 10.66 10.66 36.81 3.41
3783 4334 4.082136 GGTAGGTTACAGTTGGACTCTGAG 60.082 50.000 2.45 2.45 36.81 3.35
3784 4335 3.830755 GGTAGGTTACAGTTGGACTCTGA 59.169 47.826 0.00 0.00 36.81 3.27
3785 4336 3.833070 AGGTAGGTTACAGTTGGACTCTG 59.167 47.826 0.00 0.00 38.68 3.35
3786 4337 4.129317 AGGTAGGTTACAGTTGGACTCT 57.871 45.455 0.00 0.00 0.00 3.24
3787 4338 4.040095 ACAAGGTAGGTTACAGTTGGACTC 59.960 45.833 0.00 0.00 31.85 3.36
3788 4339 3.971971 ACAAGGTAGGTTACAGTTGGACT 59.028 43.478 0.00 0.00 31.85 3.85
3789 4340 4.347360 ACAAGGTAGGTTACAGTTGGAC 57.653 45.455 0.00 0.00 31.85 4.02
3790 4341 4.900652 TGTACAAGGTAGGTTACAGTTGGA 59.099 41.667 0.00 0.00 31.85 3.53
3791 4342 5.217978 TGTACAAGGTAGGTTACAGTTGG 57.782 43.478 0.00 0.00 31.85 3.77
3800 4351 9.609346 GTGTTGAATATAATGTACAAGGTAGGT 57.391 33.333 0.00 0.00 0.00 3.08
3801 4352 9.607988 TGTGTTGAATATAATGTACAAGGTAGG 57.392 33.333 0.00 0.00 0.00 3.18
3804 4355 9.515226 AGTTGTGTTGAATATAATGTACAAGGT 57.485 29.630 0.00 0.00 0.00 3.50
3805 4356 9.988350 GAGTTGTGTTGAATATAATGTACAAGG 57.012 33.333 0.00 0.00 0.00 3.61
3806 4357 9.988350 GGAGTTGTGTTGAATATAATGTACAAG 57.012 33.333 0.00 0.00 0.00 3.16
3807 4358 9.508642 TGGAGTTGTGTTGAATATAATGTACAA 57.491 29.630 0.00 0.00 0.00 2.41
3808 4359 9.508642 TTGGAGTTGTGTTGAATATAATGTACA 57.491 29.630 0.00 0.00 0.00 2.90
3809 4360 9.769093 GTTGGAGTTGTGTTGAATATAATGTAC 57.231 33.333 0.00 0.00 0.00 2.90
3810 4361 9.508642 TGTTGGAGTTGTGTTGAATATAATGTA 57.491 29.630 0.00 0.00 0.00 2.29
3811 4362 8.402798 TGTTGGAGTTGTGTTGAATATAATGT 57.597 30.769 0.00 0.00 0.00 2.71
3812 4363 9.689976 TTTGTTGGAGTTGTGTTGAATATAATG 57.310 29.630 0.00 0.00 0.00 1.90
3813 4364 9.691362 GTTTGTTGGAGTTGTGTTGAATATAAT 57.309 29.630 0.00 0.00 0.00 1.28
3814 4365 8.908903 AGTTTGTTGGAGTTGTGTTGAATATAA 58.091 29.630 0.00 0.00 0.00 0.98
3815 4366 8.458573 AGTTTGTTGGAGTTGTGTTGAATATA 57.541 30.769 0.00 0.00 0.00 0.86
3816 4367 7.346751 AGTTTGTTGGAGTTGTGTTGAATAT 57.653 32.000 0.00 0.00 0.00 1.28
3817 4368 6.183360 GGAGTTTGTTGGAGTTGTGTTGAATA 60.183 38.462 0.00 0.00 0.00 1.75
3818 4369 5.394115 GGAGTTTGTTGGAGTTGTGTTGAAT 60.394 40.000 0.00 0.00 0.00 2.57
3819 4370 4.082463 GGAGTTTGTTGGAGTTGTGTTGAA 60.082 41.667 0.00 0.00 0.00 2.69
3820 4371 3.442273 GGAGTTTGTTGGAGTTGTGTTGA 59.558 43.478 0.00 0.00 0.00 3.18
3821 4372 3.192422 TGGAGTTTGTTGGAGTTGTGTTG 59.808 43.478 0.00 0.00 0.00 3.33
3822 4373 3.192633 GTGGAGTTTGTTGGAGTTGTGTT 59.807 43.478 0.00 0.00 0.00 3.32
3823 4374 2.752903 GTGGAGTTTGTTGGAGTTGTGT 59.247 45.455 0.00 0.00 0.00 3.72
3824 4375 3.420839 GTGGAGTTTGTTGGAGTTGTG 57.579 47.619 0.00 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.