Multiple sequence alignment - TraesCS1D01G266300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G266300 chr1D 100.000 4160 0 0 1 4160 362133572 362129413 0.000000e+00 7683.0
1 TraesCS1D01G266300 chr1D 86.998 1046 83 20 800 1815 362013419 362012397 0.000000e+00 1129.0
2 TraesCS1D01G266300 chr1D 77.561 615 106 17 1124 1710 476872643 476872033 3.980000e-90 342.0
3 TraesCS1D01G266300 chr1D 97.980 99 2 0 7 105 127778193 127778095 5.530000e-39 172.0
4 TraesCS1D01G266300 chr1D 96.190 105 4 0 1 105 325822620 325822724 5.530000e-39 172.0
5 TraesCS1D01G266300 chr1D 96.190 105 4 0 1 105 398252079 398252183 5.530000e-39 172.0
6 TraesCS1D01G266300 chr1D 97.980 99 2 0 7 105 450950148 450950050 5.530000e-39 172.0
7 TraesCS1D01G266300 chr1D 96.190 105 4 0 1 105 452061012 452061116 5.530000e-39 172.0
8 TraesCS1D01G266300 chr1A 95.783 1826 40 10 2351 4160 461642627 461640823 0.000000e+00 2911.0
9 TraesCS1D01G266300 chr1A 95.573 1039 36 7 756 1787 461644209 461643174 0.000000e+00 1655.0
10 TraesCS1D01G266300 chr1A 88.519 932 77 18 810 1723 461524228 461523309 0.000000e+00 1101.0
11 TraesCS1D01G266300 chr1A 87.121 528 30 17 1778 2298 461643122 461642626 7.810000e-157 564.0
12 TraesCS1D01G266300 chr1B 95.004 1281 46 10 752 2020 484693105 484691831 0.000000e+00 1995.0
13 TraesCS1D01G266300 chr1B 91.365 996 59 12 3192 4160 484690042 484689047 0.000000e+00 1338.0
14 TraesCS1D01G266300 chr1B 93.990 782 47 0 2427 3208 484691258 484690477 0.000000e+00 1184.0
15 TraesCS1D01G266300 chr1B 87.140 1042 86 23 800 1814 484465437 484464417 0.000000e+00 1138.0
16 TraesCS1D01G266300 chr1B 88.037 652 72 5 2560 3208 484463754 484463106 0.000000e+00 767.0
17 TraesCS1D01G266300 chr1B 92.511 227 13 4 2175 2399 484691647 484691423 5.190000e-84 322.0
18 TraesCS1D01G266300 chr1B 76.355 609 110 27 1128 1707 664317874 664318477 3.140000e-76 296.0
19 TraesCS1D01G266300 chr1B 81.148 122 23 0 2559 2680 656183494 656183615 9.520000e-17 99.0
20 TraesCS1D01G266300 chr1B 90.141 71 6 1 2061 2131 484691701 484691632 1.590000e-14 91.6
21 TraesCS1D01G266300 chr5D 97.115 104 3 0 1 104 469701223 469701326 4.270000e-40 176.0
22 TraesCS1D01G266300 chr5D 96.190 105 4 0 1 105 65390050 65390154 5.530000e-39 172.0
23 TraesCS1D01G266300 chr4D 98.969 97 1 0 7 103 456647055 456646959 1.540000e-39 174.0
24 TraesCS1D01G266300 chr6D 96.190 105 4 0 1 105 175351718 175351822 5.530000e-39 172.0
25 TraesCS1D01G266300 chr3D 88.235 119 12 2 1444 1561 326120747 326120630 1.560000e-29 141.0
26 TraesCS1D01G266300 chr3A 87.395 119 13 2 1444 1561 438810548 438810665 7.250000e-28 135.0
27 TraesCS1D01G266300 chr3B 77.698 139 28 2 594 731 736471794 736471658 9.590000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G266300 chr1D 362129413 362133572 4159 True 7683.00 7683 100.000000 1 4160 1 chr1D.!!$R3 4159
1 TraesCS1D01G266300 chr1D 362012397 362013419 1022 True 1129.00 1129 86.998000 800 1815 1 chr1D.!!$R2 1015
2 TraesCS1D01G266300 chr1D 476872033 476872643 610 True 342.00 342 77.561000 1124 1710 1 chr1D.!!$R5 586
3 TraesCS1D01G266300 chr1A 461640823 461644209 3386 True 1710.00 2911 92.825667 756 4160 3 chr1A.!!$R2 3404
4 TraesCS1D01G266300 chr1A 461523309 461524228 919 True 1101.00 1101 88.519000 810 1723 1 chr1A.!!$R1 913
5 TraesCS1D01G266300 chr1B 484689047 484693105 4058 True 986.12 1995 92.602200 752 4160 5 chr1B.!!$R2 3408
6 TraesCS1D01G266300 chr1B 484463106 484465437 2331 True 952.50 1138 87.588500 800 3208 2 chr1B.!!$R1 2408
7 TraesCS1D01G266300 chr1B 664317874 664318477 603 False 296.00 296 76.355000 1128 1707 1 chr1B.!!$F2 579

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
331 332 0.036010 CACCGCAGACTTGGAGGATT 60.036 55.0 0.00 0.00 0.00 3.01 F
594 595 0.036010 GACTCATGGGCCGGATATGG 60.036 60.0 5.05 3.14 0.00 2.74 F
639 640 0.037447 GGCCCAGATATGAAGAGCCC 59.963 60.0 0.00 0.00 32.68 5.19 F
1701 1754 0.103937 CCAAAACCAGCGCCAAAGAA 59.896 50.0 2.29 0.00 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2251 2540 0.179215 CCAAGCTGACGCGTTCAATC 60.179 55.000 15.53 0.0 42.32 2.67 R
2391 2746 0.726827 CGCTTTCGCTGAGGCATAAA 59.273 50.000 0.00 0.0 38.60 1.40 R
2631 3103 1.363807 CGATGCACCGAGGCTATGA 59.636 57.895 0.00 0.0 34.04 2.15 R
3213 4136 0.739813 ACGCCATGAACCGAGTAAGC 60.740 55.000 0.00 0.0 0.00 3.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 9.443323 AAAAAGTTGCCAAAAGTATGTAAAAGT 57.557 25.926 0.00 0.00 0.00 2.66
48 49 9.443323 AAAAGTTGCCAAAAGTATGTAAAAGTT 57.557 25.926 0.00 0.00 0.00 2.66
49 50 8.419076 AAGTTGCCAAAAGTATGTAAAAGTTG 57.581 30.769 0.00 0.00 0.00 3.16
50 51 7.552459 AGTTGCCAAAAGTATGTAAAAGTTGT 58.448 30.769 0.00 0.00 0.00 3.32
51 52 8.688151 AGTTGCCAAAAGTATGTAAAAGTTGTA 58.312 29.630 0.00 0.00 0.00 2.41
52 53 8.964150 GTTGCCAAAAGTATGTAAAAGTTGTAG 58.036 33.333 0.00 0.00 0.00 2.74
53 54 8.453238 TGCCAAAAGTATGTAAAAGTTGTAGA 57.547 30.769 0.00 0.00 0.00 2.59
54 55 8.904834 TGCCAAAAGTATGTAAAAGTTGTAGAA 58.095 29.630 0.00 0.00 0.00 2.10
55 56 9.908152 GCCAAAAGTATGTAAAAGTTGTAGAAT 57.092 29.630 0.00 0.00 0.00 2.40
65 66 8.465999 TGTAAAAGTTGTAGAATATTGGCATGG 58.534 33.333 0.00 0.00 0.00 3.66
66 67 7.716799 AAAAGTTGTAGAATATTGGCATGGA 57.283 32.000 0.00 0.00 0.00 3.41
67 68 7.716799 AAAGTTGTAGAATATTGGCATGGAA 57.283 32.000 0.00 0.00 0.00 3.53
68 69 6.699575 AGTTGTAGAATATTGGCATGGAAC 57.300 37.500 0.00 0.00 0.00 3.62
110 111 1.513178 CGTAGACGTATCAGCTTTGCG 59.487 52.381 0.00 2.88 34.11 4.85
111 112 1.852895 GTAGACGTATCAGCTTTGCGG 59.147 52.381 8.44 0.00 0.00 5.69
112 113 0.246635 AGACGTATCAGCTTTGCGGT 59.753 50.000 8.44 0.00 0.00 5.68
113 114 0.370273 GACGTATCAGCTTTGCGGTG 59.630 55.000 8.44 0.00 42.42 4.94
114 115 1.060937 CGTATCAGCTTTGCGGTGC 59.939 57.895 0.00 0.00 40.87 5.01
115 116 1.429423 GTATCAGCTTTGCGGTGCC 59.571 57.895 0.00 0.00 40.87 5.01
116 117 1.002746 TATCAGCTTTGCGGTGCCA 60.003 52.632 0.00 0.00 40.87 4.92
117 118 1.305219 TATCAGCTTTGCGGTGCCAC 61.305 55.000 0.00 0.00 40.87 5.01
118 119 3.594775 CAGCTTTGCGGTGCCACA 61.595 61.111 0.00 0.00 33.91 4.17
119 120 3.595758 AGCTTTGCGGTGCCACAC 61.596 61.111 0.00 0.00 0.00 3.82
120 121 3.898509 GCTTTGCGGTGCCACACA 61.899 61.111 0.00 0.00 35.86 3.72
134 135 4.619227 CACACGCGTCCACCCCTT 62.619 66.667 9.86 0.00 0.00 3.95
135 136 4.619227 ACACGCGTCCACCCCTTG 62.619 66.667 9.86 0.00 0.00 3.61
136 137 4.619227 CACGCGTCCACCCCTTGT 62.619 66.667 9.86 0.00 0.00 3.16
137 138 4.309950 ACGCGTCCACCCCTTGTC 62.310 66.667 5.58 0.00 0.00 3.18
141 142 4.717313 GTCCACCCCTTGTCGGCC 62.717 72.222 0.00 0.00 0.00 6.13
142 143 4.974438 TCCACCCCTTGTCGGCCT 62.974 66.667 0.00 0.00 0.00 5.19
143 144 4.722700 CCACCCCTTGTCGGCCTG 62.723 72.222 0.00 0.00 0.00 4.85
148 149 4.711949 CCTTGTCGGCCTGCAGCT 62.712 66.667 8.66 0.00 43.05 4.24
183 184 4.734652 GGAAACGCCAGATCCCAA 57.265 55.556 0.00 0.00 36.34 4.12
184 185 2.180674 GGAAACGCCAGATCCCAAC 58.819 57.895 0.00 0.00 36.34 3.77
185 186 1.313091 GGAAACGCCAGATCCCAACC 61.313 60.000 0.00 0.00 36.34 3.77
186 187 1.644786 GAAACGCCAGATCCCAACCG 61.645 60.000 0.00 0.00 0.00 4.44
187 188 2.406002 AAACGCCAGATCCCAACCGT 62.406 55.000 0.00 0.00 0.00 4.83
188 189 2.046314 CGCCAGATCCCAACCGTT 60.046 61.111 0.00 0.00 0.00 4.44
189 190 2.398554 CGCCAGATCCCAACCGTTG 61.399 63.158 4.12 4.12 0.00 4.10
190 191 2.700773 GCCAGATCCCAACCGTTGC 61.701 63.158 5.68 0.00 0.00 4.17
191 192 2.046285 CCAGATCCCAACCGTTGCC 61.046 63.158 5.68 0.00 0.00 4.52
192 193 2.046285 CAGATCCCAACCGTTGCCC 61.046 63.158 5.68 0.00 0.00 5.36
193 194 3.131478 GATCCCAACCGTTGCCCG 61.131 66.667 5.68 0.00 0.00 6.13
227 228 3.933155 CGAAGCATTGTATCTCACACC 57.067 47.619 0.00 0.00 36.69 4.16
228 229 2.609459 CGAAGCATTGTATCTCACACCC 59.391 50.000 0.00 0.00 36.69 4.61
229 230 3.609853 GAAGCATTGTATCTCACACCCA 58.390 45.455 0.00 0.00 36.69 4.51
230 231 2.991250 AGCATTGTATCTCACACCCAC 58.009 47.619 0.00 0.00 36.69 4.61
231 232 2.017049 GCATTGTATCTCACACCCACC 58.983 52.381 0.00 0.00 36.69 4.61
232 233 2.356125 GCATTGTATCTCACACCCACCT 60.356 50.000 0.00 0.00 36.69 4.00
233 234 3.535561 CATTGTATCTCACACCCACCTC 58.464 50.000 0.00 0.00 36.69 3.85
234 235 1.568504 TGTATCTCACACCCACCTCC 58.431 55.000 0.00 0.00 30.04 4.30
235 236 0.831307 GTATCTCACACCCACCTCCC 59.169 60.000 0.00 0.00 0.00 4.30
236 237 0.326238 TATCTCACACCCACCTCCCC 60.326 60.000 0.00 0.00 0.00 4.81
237 238 2.125066 ATCTCACACCCACCTCCCCT 62.125 60.000 0.00 0.00 0.00 4.79
238 239 1.080354 CTCACACCCACCTCCCCTA 59.920 63.158 0.00 0.00 0.00 3.53
239 240 1.229400 TCACACCCACCTCCCCTAC 60.229 63.158 0.00 0.00 0.00 3.18
240 241 1.537889 CACACCCACCTCCCCTACA 60.538 63.158 0.00 0.00 0.00 2.74
241 242 1.131303 CACACCCACCTCCCCTACAA 61.131 60.000 0.00 0.00 0.00 2.41
242 243 0.840722 ACACCCACCTCCCCTACAAG 60.841 60.000 0.00 0.00 0.00 3.16
243 244 0.546747 CACCCACCTCCCCTACAAGA 60.547 60.000 0.00 0.00 0.00 3.02
244 245 0.546988 ACCCACCTCCCCTACAAGAC 60.547 60.000 0.00 0.00 0.00 3.01
245 246 1.614241 CCCACCTCCCCTACAAGACG 61.614 65.000 0.00 0.00 0.00 4.18
246 247 0.613853 CCACCTCCCCTACAAGACGA 60.614 60.000 0.00 0.00 0.00 4.20
247 248 0.531200 CACCTCCCCTACAAGACGAC 59.469 60.000 0.00 0.00 0.00 4.34
248 249 0.614134 ACCTCCCCTACAAGACGACC 60.614 60.000 0.00 0.00 0.00 4.79
249 250 1.664321 CCTCCCCTACAAGACGACCG 61.664 65.000 0.00 0.00 0.00 4.79
250 251 2.183555 CCCCTACAAGACGACCGC 59.816 66.667 0.00 0.00 0.00 5.68
251 252 2.183555 CCCTACAAGACGACCGCC 59.816 66.667 0.00 0.00 0.00 6.13
252 253 2.202570 CCTACAAGACGACCGCCG 60.203 66.667 0.00 0.00 45.44 6.46
253 254 2.879462 CTACAAGACGACCGCCGC 60.879 66.667 0.00 0.00 43.32 6.53
254 255 3.620300 CTACAAGACGACCGCCGCA 62.620 63.158 0.00 0.00 43.32 5.69
255 256 3.210223 TACAAGACGACCGCCGCAA 62.210 57.895 0.00 0.00 43.32 4.85
256 257 3.777925 CAAGACGACCGCCGCAAG 61.778 66.667 0.00 0.00 43.32 4.01
272 273 1.533625 CAAGGATTTGCCGGTGAAGA 58.466 50.000 1.90 0.00 43.43 2.87
273 274 1.200020 CAAGGATTTGCCGGTGAAGAC 59.800 52.381 1.90 0.00 43.43 3.01
274 275 0.673644 AGGATTTGCCGGTGAAGACG 60.674 55.000 1.90 0.00 43.43 4.18
275 276 1.134694 GATTTGCCGGTGAAGACGC 59.865 57.895 1.90 0.00 0.00 5.19
276 277 2.253414 GATTTGCCGGTGAAGACGCC 62.253 60.000 1.90 0.00 42.65 5.68
277 278 3.758973 TTTGCCGGTGAAGACGCCA 62.759 57.895 1.90 0.00 46.01 5.69
278 279 4.980805 TGCCGGTGAAGACGCCAC 62.981 66.667 1.90 0.00 46.01 5.01
279 280 4.681978 GCCGGTGAAGACGCCACT 62.682 66.667 1.90 0.00 46.01 4.00
280 281 2.432628 CCGGTGAAGACGCCACTC 60.433 66.667 0.00 0.00 46.01 3.51
281 282 2.805353 CGGTGAAGACGCCACTCG 60.805 66.667 0.00 0.00 46.01 4.18
282 283 3.112709 GGTGAAGACGCCACTCGC 61.113 66.667 0.00 0.00 45.14 5.03
324 325 4.081030 CGCAGCACCGCAGACTTG 62.081 66.667 0.00 0.00 0.00 3.16
325 326 3.730761 GCAGCACCGCAGACTTGG 61.731 66.667 0.00 0.00 0.00 3.61
326 327 2.031012 CAGCACCGCAGACTTGGA 59.969 61.111 0.00 0.00 0.00 3.53
327 328 2.031516 CAGCACCGCAGACTTGGAG 61.032 63.158 0.00 0.00 0.00 3.86
328 329 2.743928 GCACCGCAGACTTGGAGG 60.744 66.667 0.00 0.00 0.00 4.30
329 330 3.059982 CACCGCAGACTTGGAGGA 58.940 61.111 0.00 0.00 0.00 3.71
330 331 1.599047 CACCGCAGACTTGGAGGAT 59.401 57.895 0.00 0.00 0.00 3.24
331 332 0.036010 CACCGCAGACTTGGAGGATT 60.036 55.000 0.00 0.00 0.00 3.01
332 333 0.250513 ACCGCAGACTTGGAGGATTC 59.749 55.000 0.00 0.00 0.00 2.52
333 334 0.807667 CCGCAGACTTGGAGGATTCG 60.808 60.000 0.00 0.00 0.00 3.34
334 335 1.424493 CGCAGACTTGGAGGATTCGC 61.424 60.000 0.00 0.00 0.00 4.70
335 336 1.092345 GCAGACTTGGAGGATTCGCC 61.092 60.000 0.00 0.00 0.00 5.54
336 337 0.462759 CAGACTTGGAGGATTCGCCC 60.463 60.000 0.00 0.00 37.37 6.13
337 338 0.618968 AGACTTGGAGGATTCGCCCT 60.619 55.000 0.00 0.00 39.77 5.19
338 339 0.462759 GACTTGGAGGATTCGCCCTG 60.463 60.000 0.00 0.00 36.49 4.45
339 340 1.821332 CTTGGAGGATTCGCCCTGC 60.821 63.158 0.00 0.00 43.95 4.85
340 341 3.344137 TTGGAGGATTCGCCCTGCC 62.344 63.158 0.00 0.00 43.15 4.85
341 342 4.570874 GGAGGATTCGCCCTGCCC 62.571 72.222 0.00 0.00 38.55 5.36
342 343 4.570874 GAGGATTCGCCCTGCCCC 62.571 72.222 0.00 0.00 36.49 5.80
356 357 4.609018 CCCCGCCGCATCGAAGAT 62.609 66.667 0.00 0.00 45.12 2.40
357 358 3.038417 CCCGCCGCATCGAAGATC 61.038 66.667 0.00 0.00 45.12 2.75
358 359 3.038417 CCGCCGCATCGAAGATCC 61.038 66.667 0.00 0.00 45.12 3.36
359 360 3.038417 CGCCGCATCGAAGATCCC 61.038 66.667 0.00 0.00 45.12 3.85
360 361 2.666526 GCCGCATCGAAGATCCCC 60.667 66.667 0.00 0.00 45.12 4.81
361 362 3.142393 CCGCATCGAAGATCCCCT 58.858 61.111 0.00 0.00 45.12 4.79
362 363 1.005630 CCGCATCGAAGATCCCCTC 60.006 63.158 0.00 0.00 45.12 4.30
363 364 1.467678 CCGCATCGAAGATCCCCTCT 61.468 60.000 0.00 0.00 45.12 3.69
371 372 2.487746 AAGATCCCCTCTTCCTCCTC 57.512 55.000 0.00 0.00 40.26 3.71
372 373 1.324014 AGATCCCCTCTTCCTCCTCA 58.676 55.000 0.00 0.00 0.00 3.86
373 374 1.653918 AGATCCCCTCTTCCTCCTCAA 59.346 52.381 0.00 0.00 0.00 3.02
374 375 1.765904 GATCCCCTCTTCCTCCTCAAC 59.234 57.143 0.00 0.00 0.00 3.18
375 376 0.793617 TCCCCTCTTCCTCCTCAACT 59.206 55.000 0.00 0.00 0.00 3.16
376 377 1.199615 CCCCTCTTCCTCCTCAACTC 58.800 60.000 0.00 0.00 0.00 3.01
377 378 1.199615 CCCTCTTCCTCCTCAACTCC 58.800 60.000 0.00 0.00 0.00 3.85
378 379 1.199615 CCTCTTCCTCCTCAACTCCC 58.800 60.000 0.00 0.00 0.00 4.30
379 380 1.199615 CTCTTCCTCCTCAACTCCCC 58.800 60.000 0.00 0.00 0.00 4.81
380 381 0.252742 TCTTCCTCCTCAACTCCCCC 60.253 60.000 0.00 0.00 0.00 5.40
381 382 0.547712 CTTCCTCCTCAACTCCCCCA 60.548 60.000 0.00 0.00 0.00 4.96
382 383 0.547712 TTCCTCCTCAACTCCCCCAG 60.548 60.000 0.00 0.00 0.00 4.45
383 384 2.674220 CCTCCTCAACTCCCCCAGC 61.674 68.421 0.00 0.00 0.00 4.85
384 385 1.920325 CTCCTCAACTCCCCCAGCA 60.920 63.158 0.00 0.00 0.00 4.41
385 386 2.190488 CTCCTCAACTCCCCCAGCAC 62.190 65.000 0.00 0.00 0.00 4.40
386 387 2.352805 CTCAACTCCCCCAGCACC 59.647 66.667 0.00 0.00 0.00 5.01
387 388 3.256960 TCAACTCCCCCAGCACCC 61.257 66.667 0.00 0.00 0.00 4.61
388 389 3.579302 CAACTCCCCCAGCACCCA 61.579 66.667 0.00 0.00 0.00 4.51
389 390 3.260100 AACTCCCCCAGCACCCAG 61.260 66.667 0.00 0.00 0.00 4.45
390 391 3.810687 AACTCCCCCAGCACCCAGA 62.811 63.158 0.00 0.00 0.00 3.86
391 392 2.935481 CTCCCCCAGCACCCAGAA 60.935 66.667 0.00 0.00 0.00 3.02
392 393 3.256960 TCCCCCAGCACCCAGAAC 61.257 66.667 0.00 0.00 0.00 3.01
393 394 3.579302 CCCCCAGCACCCAGAACA 61.579 66.667 0.00 0.00 0.00 3.18
394 395 2.034687 CCCCAGCACCCAGAACAG 59.965 66.667 0.00 0.00 0.00 3.16
395 396 2.034687 CCCAGCACCCAGAACAGG 59.965 66.667 0.00 0.00 0.00 4.00
396 397 2.674380 CCAGCACCCAGAACAGGC 60.674 66.667 0.00 0.00 0.00 4.85
397 398 2.674380 CAGCACCCAGAACAGGCC 60.674 66.667 0.00 0.00 0.00 5.19
398 399 4.335647 AGCACCCAGAACAGGCCG 62.336 66.667 0.00 0.00 0.00 6.13
453 454 3.633116 CCCCCGACGGTGAAGGTT 61.633 66.667 13.94 0.00 0.00 3.50
454 455 2.358247 CCCCGACGGTGAAGGTTG 60.358 66.667 13.94 0.00 0.00 3.77
455 456 3.047877 CCCGACGGTGAAGGTTGC 61.048 66.667 13.94 0.00 0.00 4.17
456 457 3.411351 CCGACGGTGAAGGTTGCG 61.411 66.667 5.48 0.00 0.00 4.85
457 458 4.072088 CGACGGTGAAGGTTGCGC 62.072 66.667 0.00 0.00 0.00 6.09
458 459 3.723348 GACGGTGAAGGTTGCGCC 61.723 66.667 4.18 0.00 37.58 6.53
497 498 2.792635 CCTTTTGGGGGAGGAGACT 58.207 57.895 0.00 0.00 39.00 3.24
498 499 0.329596 CCTTTTGGGGGAGGAGACTG 59.670 60.000 0.00 0.00 36.91 3.51
505 506 3.124686 GGAGGAGACTGCTAGCGG 58.875 66.667 22.26 22.26 46.74 5.52
506 507 2.494530 GGAGGAGACTGCTAGCGGG 61.495 68.421 26.90 16.15 46.74 6.13
507 508 1.454111 GAGGAGACTGCTAGCGGGA 60.454 63.158 26.90 0.24 44.43 5.14
508 509 1.730451 GAGGAGACTGCTAGCGGGAC 61.730 65.000 26.90 19.23 44.43 4.46
535 536 2.668550 GAAGGCGCCTTCCGTGTT 60.669 61.111 45.60 24.93 44.76 3.32
536 537 2.966309 GAAGGCGCCTTCCGTGTTG 61.966 63.158 45.60 0.00 44.76 3.33
541 542 3.365265 GCCTTCCGTGTTGCCCAG 61.365 66.667 0.00 0.00 0.00 4.45
542 543 2.672996 CCTTCCGTGTTGCCCAGG 60.673 66.667 0.00 0.00 0.00 4.45
543 544 3.365265 CTTCCGTGTTGCCCAGGC 61.365 66.667 0.38 0.38 42.35 4.85
553 554 2.985847 GCCCAGGCACACAACCTC 60.986 66.667 3.12 0.00 41.49 3.85
554 555 2.669569 CCCAGGCACACAACCTCG 60.670 66.667 0.00 0.00 34.42 4.63
555 556 3.357079 CCAGGCACACAACCTCGC 61.357 66.667 0.00 0.00 34.42 5.03
556 557 2.281070 CAGGCACACAACCTCGCT 60.281 61.111 0.00 0.00 34.42 4.93
557 558 2.031163 AGGCACACAACCTCGCTC 59.969 61.111 0.00 0.00 28.76 5.03
558 559 3.050275 GGCACACAACCTCGCTCC 61.050 66.667 0.00 0.00 0.00 4.70
559 560 3.050275 GCACACAACCTCGCTCCC 61.050 66.667 0.00 0.00 0.00 4.30
560 561 2.358737 CACACAACCTCGCTCCCC 60.359 66.667 0.00 0.00 0.00 4.81
561 562 2.847234 ACACAACCTCGCTCCCCA 60.847 61.111 0.00 0.00 0.00 4.96
562 563 2.358737 CACAACCTCGCTCCCCAC 60.359 66.667 0.00 0.00 0.00 4.61
563 564 4.003788 ACAACCTCGCTCCCCACG 62.004 66.667 0.00 0.00 0.00 4.94
564 565 4.760047 CAACCTCGCTCCCCACGG 62.760 72.222 0.00 0.00 0.00 4.94
568 569 3.461773 CTCGCTCCCCACGGTCAT 61.462 66.667 0.00 0.00 0.00 3.06
569 570 2.043752 TCGCTCCCCACGGTCATA 60.044 61.111 0.00 0.00 0.00 2.15
570 571 1.456892 TCGCTCCCCACGGTCATAT 60.457 57.895 0.00 0.00 0.00 1.78
571 572 1.006102 CGCTCCCCACGGTCATATC 60.006 63.158 0.00 0.00 0.00 1.63
572 573 1.744320 CGCTCCCCACGGTCATATCA 61.744 60.000 0.00 0.00 0.00 2.15
573 574 0.249911 GCTCCCCACGGTCATATCAC 60.250 60.000 0.00 0.00 0.00 3.06
574 575 1.414158 CTCCCCACGGTCATATCACT 58.586 55.000 0.00 0.00 0.00 3.41
575 576 1.069204 CTCCCCACGGTCATATCACTG 59.931 57.143 0.00 0.00 0.00 3.66
576 577 1.119684 CCCCACGGTCATATCACTGA 58.880 55.000 0.00 0.00 0.00 3.41
577 578 1.202533 CCCCACGGTCATATCACTGAC 60.203 57.143 0.00 0.00 43.90 3.51
578 579 1.757118 CCCACGGTCATATCACTGACT 59.243 52.381 0.00 0.00 44.05 3.41
579 580 2.223829 CCCACGGTCATATCACTGACTC 60.224 54.545 0.00 0.00 44.05 3.36
580 581 2.427095 CCACGGTCATATCACTGACTCA 59.573 50.000 0.00 0.00 44.05 3.41
581 582 3.068732 CCACGGTCATATCACTGACTCAT 59.931 47.826 0.00 0.00 44.05 2.90
582 583 4.047142 CACGGTCATATCACTGACTCATG 58.953 47.826 0.00 0.00 44.05 3.07
583 584 3.068732 ACGGTCATATCACTGACTCATGG 59.931 47.826 0.00 0.00 44.05 3.66
584 585 3.553715 CGGTCATATCACTGACTCATGGG 60.554 52.174 0.00 0.00 44.05 4.00
585 586 3.397482 GTCATATCACTGACTCATGGGC 58.603 50.000 0.00 0.00 41.87 5.36
586 587 2.369860 TCATATCACTGACTCATGGGCC 59.630 50.000 0.00 0.00 0.00 5.80
587 588 0.752658 TATCACTGACTCATGGGCCG 59.247 55.000 0.00 0.00 0.00 6.13
588 589 1.976132 ATCACTGACTCATGGGCCGG 61.976 60.000 0.00 0.00 0.00 6.13
589 590 2.284625 ACTGACTCATGGGCCGGA 60.285 61.111 5.05 0.00 0.00 5.14
590 591 1.690633 ACTGACTCATGGGCCGGAT 60.691 57.895 5.05 0.00 0.00 4.18
591 592 0.398522 ACTGACTCATGGGCCGGATA 60.399 55.000 5.05 0.00 0.00 2.59
592 593 0.979665 CTGACTCATGGGCCGGATAT 59.020 55.000 5.05 0.00 0.00 1.63
593 594 0.686789 TGACTCATGGGCCGGATATG 59.313 55.000 5.05 6.12 0.00 1.78
594 595 0.036010 GACTCATGGGCCGGATATGG 60.036 60.000 5.05 3.14 0.00 2.74
595 596 0.768221 ACTCATGGGCCGGATATGGT 60.768 55.000 5.05 3.75 0.00 3.55
596 597 0.321919 CTCATGGGCCGGATATGGTG 60.322 60.000 5.05 0.00 0.00 4.17
597 598 0.766288 TCATGGGCCGGATATGGTGA 60.766 55.000 5.05 0.00 0.00 4.02
598 599 0.321919 CATGGGCCGGATATGGTGAG 60.322 60.000 5.05 0.00 0.00 3.51
599 600 0.768221 ATGGGCCGGATATGGTGAGT 60.768 55.000 5.05 0.00 0.00 3.41
600 601 1.071471 GGGCCGGATATGGTGAGTG 59.929 63.158 5.05 0.00 0.00 3.51
601 602 1.598130 GGCCGGATATGGTGAGTGC 60.598 63.158 5.05 0.00 0.00 4.40
602 603 1.598130 GCCGGATATGGTGAGTGCC 60.598 63.158 5.05 0.00 0.00 5.01
603 604 1.300931 CCGGATATGGTGAGTGCCG 60.301 63.158 0.00 0.00 38.54 5.69
604 605 1.300931 CGGATATGGTGAGTGCCGG 60.301 63.158 0.00 0.00 35.42 6.13
605 606 1.830145 GGATATGGTGAGTGCCGGT 59.170 57.895 1.90 0.00 0.00 5.28
606 607 0.249911 GGATATGGTGAGTGCCGGTC 60.250 60.000 1.90 0.00 0.00 4.79
607 608 0.464036 GATATGGTGAGTGCCGGTCA 59.536 55.000 1.90 0.00 0.00 4.02
608 609 0.465705 ATATGGTGAGTGCCGGTCAG 59.534 55.000 1.90 0.00 0.00 3.51
609 610 0.902984 TATGGTGAGTGCCGGTCAGT 60.903 55.000 1.90 4.41 0.00 3.41
610 611 2.048127 GGTGAGTGCCGGTCAGTC 60.048 66.667 20.35 20.35 43.80 3.51
611 612 2.048127 GTGAGTGCCGGTCAGTCC 60.048 66.667 22.72 14.35 43.06 3.85
612 613 2.523168 TGAGTGCCGGTCAGTCCA 60.523 61.111 22.72 12.94 43.06 4.02
613 614 2.262915 GAGTGCCGGTCAGTCCAG 59.737 66.667 17.82 0.00 38.85 3.86
614 615 3.302347 GAGTGCCGGTCAGTCCAGG 62.302 68.421 17.82 0.00 38.85 4.45
618 619 4.003788 CCGGTCAGTCCAGGCGTT 62.004 66.667 0.00 0.00 35.57 4.84
619 620 2.030562 CGGTCAGTCCAGGCGTTT 59.969 61.111 0.00 0.00 35.57 3.60
620 621 2.317609 CGGTCAGTCCAGGCGTTTG 61.318 63.158 0.00 0.00 35.57 2.93
621 622 1.966451 GGTCAGTCCAGGCGTTTGG 60.966 63.158 1.38 1.38 39.70 3.28
622 623 2.281484 TCAGTCCAGGCGTTTGGC 60.281 61.111 2.82 0.00 38.16 4.52
632 633 3.094386 GCGTTTGGCCCAGATATGA 57.906 52.632 0.00 0.00 34.80 2.15
633 634 1.388547 GCGTTTGGCCCAGATATGAA 58.611 50.000 0.00 0.00 34.80 2.57
634 635 1.334869 GCGTTTGGCCCAGATATGAAG 59.665 52.381 0.00 0.00 34.80 3.02
635 636 2.917933 CGTTTGGCCCAGATATGAAGA 58.082 47.619 0.00 0.00 0.00 2.87
636 637 2.874701 CGTTTGGCCCAGATATGAAGAG 59.125 50.000 0.00 0.00 0.00 2.85
637 638 2.620585 GTTTGGCCCAGATATGAAGAGC 59.379 50.000 0.00 0.00 0.00 4.09
638 639 0.767375 TGGCCCAGATATGAAGAGCC 59.233 55.000 0.00 0.00 39.41 4.70
639 640 0.037447 GGCCCAGATATGAAGAGCCC 59.963 60.000 0.00 0.00 32.68 5.19
640 641 0.767375 GCCCAGATATGAAGAGCCCA 59.233 55.000 0.00 0.00 0.00 5.36
641 642 1.271271 GCCCAGATATGAAGAGCCCAG 60.271 57.143 0.00 0.00 0.00 4.45
642 643 2.053244 CCCAGATATGAAGAGCCCAGT 58.947 52.381 0.00 0.00 0.00 4.00
643 644 2.441001 CCCAGATATGAAGAGCCCAGTT 59.559 50.000 0.00 0.00 0.00 3.16
644 645 3.474600 CCAGATATGAAGAGCCCAGTTG 58.525 50.000 0.00 0.00 0.00 3.16
645 646 3.474600 CAGATATGAAGAGCCCAGTTGG 58.525 50.000 0.00 0.00 37.09 3.77
657 658 1.775385 CCAGTTGGGTGGTCAAAACT 58.225 50.000 0.00 0.00 33.20 2.66
658 659 1.408702 CCAGTTGGGTGGTCAAAACTG 59.591 52.381 7.29 7.29 45.81 3.16
659 660 1.408702 CAGTTGGGTGGTCAAAACTGG 59.591 52.381 6.52 0.00 43.64 4.00
660 661 1.006639 AGTTGGGTGGTCAAAACTGGT 59.993 47.619 0.00 0.00 31.82 4.00
661 662 1.407618 GTTGGGTGGTCAAAACTGGTC 59.592 52.381 0.00 0.00 0.00 4.02
662 663 0.106419 TGGGTGGTCAAAACTGGTCC 60.106 55.000 0.00 0.00 0.00 4.46
663 664 1.170290 GGGTGGTCAAAACTGGTCCG 61.170 60.000 0.00 0.00 0.00 4.79
664 665 1.652563 GTGGTCAAAACTGGTCCGC 59.347 57.895 0.00 0.00 0.00 5.54
665 666 1.098712 GTGGTCAAAACTGGTCCGCA 61.099 55.000 0.00 0.00 0.00 5.69
666 667 1.098712 TGGTCAAAACTGGTCCGCAC 61.099 55.000 0.00 0.00 0.00 5.34
667 668 1.098712 GGTCAAAACTGGTCCGCACA 61.099 55.000 0.00 0.00 0.00 4.57
668 669 0.307760 GTCAAAACTGGTCCGCACAG 59.692 55.000 0.00 0.00 41.64 3.66
672 673 2.421739 ACTGGTCCGCACAGTGAC 59.578 61.111 4.15 0.00 46.67 3.67
673 674 3.165160 ACTGGTCCGCACAGTGACC 62.165 63.158 4.15 3.68 46.67 4.02
702 703 2.593436 CCGTGCGTTTGGGAAGGT 60.593 61.111 0.00 0.00 31.06 3.50
703 704 2.190841 CCGTGCGTTTGGGAAGGTT 61.191 57.895 0.00 0.00 31.06 3.50
704 705 0.885596 CCGTGCGTTTGGGAAGGTTA 60.886 55.000 0.00 0.00 31.06 2.85
705 706 1.161843 CGTGCGTTTGGGAAGGTTAT 58.838 50.000 0.00 0.00 0.00 1.89
706 707 1.135803 CGTGCGTTTGGGAAGGTTATG 60.136 52.381 0.00 0.00 0.00 1.90
707 708 1.201414 GTGCGTTTGGGAAGGTTATGG 59.799 52.381 0.00 0.00 0.00 2.74
708 709 0.815095 GCGTTTGGGAAGGTTATGGG 59.185 55.000 0.00 0.00 0.00 4.00
709 710 1.889262 GCGTTTGGGAAGGTTATGGGT 60.889 52.381 0.00 0.00 0.00 4.51
710 711 2.618559 GCGTTTGGGAAGGTTATGGGTA 60.619 50.000 0.00 0.00 0.00 3.69
711 712 3.275999 CGTTTGGGAAGGTTATGGGTAG 58.724 50.000 0.00 0.00 0.00 3.18
712 713 3.307904 CGTTTGGGAAGGTTATGGGTAGT 60.308 47.826 0.00 0.00 0.00 2.73
713 714 4.267536 GTTTGGGAAGGTTATGGGTAGTC 58.732 47.826 0.00 0.00 0.00 2.59
714 715 2.484602 TGGGAAGGTTATGGGTAGTCC 58.515 52.381 0.00 0.00 0.00 3.85
715 716 1.415289 GGGAAGGTTATGGGTAGTCCG 59.585 57.143 0.00 0.00 38.76 4.79
716 717 2.113807 GGAAGGTTATGGGTAGTCCGT 58.886 52.381 0.00 0.00 38.76 4.69
717 718 2.502947 GGAAGGTTATGGGTAGTCCGTT 59.497 50.000 0.00 0.00 38.76 4.44
718 719 3.528532 GAAGGTTATGGGTAGTCCGTTG 58.471 50.000 0.00 0.00 38.76 4.10
719 720 2.543635 AGGTTATGGGTAGTCCGTTGT 58.456 47.619 0.00 0.00 38.76 3.32
720 721 3.711863 AGGTTATGGGTAGTCCGTTGTA 58.288 45.455 0.00 0.00 38.76 2.41
721 722 3.703052 AGGTTATGGGTAGTCCGTTGTAG 59.297 47.826 0.00 0.00 38.76 2.74
722 723 3.701040 GGTTATGGGTAGTCCGTTGTAGA 59.299 47.826 0.00 0.00 38.76 2.59
723 724 4.343239 GGTTATGGGTAGTCCGTTGTAGAT 59.657 45.833 0.00 0.00 38.76 1.98
724 725 5.287226 GTTATGGGTAGTCCGTTGTAGATG 58.713 45.833 0.00 0.00 38.76 2.90
725 726 1.479323 TGGGTAGTCCGTTGTAGATGC 59.521 52.381 0.00 0.00 38.76 3.91
726 727 1.755380 GGGTAGTCCGTTGTAGATGCT 59.245 52.381 0.00 0.00 33.83 3.79
727 728 2.223758 GGGTAGTCCGTTGTAGATGCTC 60.224 54.545 0.00 0.00 33.83 4.26
728 729 2.688958 GGTAGTCCGTTGTAGATGCTCT 59.311 50.000 0.00 0.00 0.00 4.09
729 730 3.130693 GGTAGTCCGTTGTAGATGCTCTT 59.869 47.826 0.00 0.00 0.00 2.85
730 731 4.337555 GGTAGTCCGTTGTAGATGCTCTTA 59.662 45.833 0.00 0.00 0.00 2.10
731 732 4.373348 AGTCCGTTGTAGATGCTCTTAC 57.627 45.455 0.00 0.00 0.00 2.34
732 733 4.017808 AGTCCGTTGTAGATGCTCTTACT 58.982 43.478 0.00 0.00 0.00 2.24
733 734 5.191426 AGTCCGTTGTAGATGCTCTTACTA 58.809 41.667 0.00 0.00 0.00 1.82
734 735 5.651139 AGTCCGTTGTAGATGCTCTTACTAA 59.349 40.000 0.00 0.00 0.00 2.24
735 736 5.742926 GTCCGTTGTAGATGCTCTTACTAAC 59.257 44.000 0.00 0.00 0.00 2.34
736 737 5.651139 TCCGTTGTAGATGCTCTTACTAACT 59.349 40.000 0.00 0.00 0.00 2.24
737 738 5.744345 CCGTTGTAGATGCTCTTACTAACTG 59.256 44.000 0.00 0.00 0.00 3.16
738 739 6.404403 CCGTTGTAGATGCTCTTACTAACTGA 60.404 42.308 0.00 0.00 0.00 3.41
739 740 7.197017 CGTTGTAGATGCTCTTACTAACTGAT 58.803 38.462 0.00 0.00 0.00 2.90
740 741 7.702772 CGTTGTAGATGCTCTTACTAACTGATT 59.297 37.037 0.00 0.00 0.00 2.57
741 742 9.372369 GTTGTAGATGCTCTTACTAACTGATTT 57.628 33.333 0.00 0.00 0.00 2.17
742 743 8.932945 TGTAGATGCTCTTACTAACTGATTTG 57.067 34.615 0.00 0.00 0.00 2.32
743 744 8.749354 TGTAGATGCTCTTACTAACTGATTTGA 58.251 33.333 0.00 0.00 0.00 2.69
744 745 9.243637 GTAGATGCTCTTACTAACTGATTTGAG 57.756 37.037 0.00 0.00 0.00 3.02
745 746 6.760770 AGATGCTCTTACTAACTGATTTGAGC 59.239 38.462 0.00 0.00 43.90 4.26
746 747 5.178797 TGCTCTTACTAACTGATTTGAGCC 58.821 41.667 0.00 0.00 43.25 4.70
747 748 4.572795 GCTCTTACTAACTGATTTGAGCCC 59.427 45.833 0.00 0.00 39.53 5.19
748 749 4.755411 TCTTACTAACTGATTTGAGCCCG 58.245 43.478 0.00 0.00 0.00 6.13
749 750 2.403252 ACTAACTGATTTGAGCCCGG 57.597 50.000 0.00 0.00 0.00 5.73
750 751 1.628846 ACTAACTGATTTGAGCCCGGT 59.371 47.619 0.00 0.00 0.00 5.28
751 752 2.009774 CTAACTGATTTGAGCCCGGTG 58.990 52.381 0.00 0.00 0.00 4.94
752 753 0.400213 AACTGATTTGAGCCCGGTGA 59.600 50.000 0.00 0.00 0.00 4.02
753 754 0.620556 ACTGATTTGAGCCCGGTGAT 59.379 50.000 0.00 0.00 0.00 3.06
754 755 1.004745 ACTGATTTGAGCCCGGTGATT 59.995 47.619 0.00 0.00 0.00 2.57
868 872 0.250295 AGTCACATGGTTCACACGGG 60.250 55.000 0.00 0.00 0.00 5.28
872 876 0.472471 ACATGGTTCACACGGGAACT 59.528 50.000 11.72 0.00 45.07 3.01
873 877 1.156736 CATGGTTCACACGGGAACTC 58.843 55.000 11.72 3.45 45.07 3.01
938 957 5.473846 CACTAGCTAGCAGCCATACTTACTA 59.526 44.000 20.91 0.00 43.77 1.82
940 959 4.475345 AGCTAGCAGCCATACTTACTAGT 58.525 43.478 18.83 0.00 43.77 2.57
941 960 5.632118 AGCTAGCAGCCATACTTACTAGTA 58.368 41.667 18.83 0.00 43.77 1.82
942 961 5.474189 AGCTAGCAGCCATACTTACTAGTAC 59.526 44.000 18.83 0.00 43.77 2.73
947 966 4.577693 CAGCCATACTTACTAGTACCACGA 59.422 45.833 0.91 0.00 39.59 4.35
1027 1050 3.083349 TCCCGATCCCACTGCCAG 61.083 66.667 0.00 0.00 0.00 4.85
1440 1493 2.341101 GGACGTCTGGAGCCGAGAA 61.341 63.158 16.46 0.00 0.00 2.87
1701 1754 0.103937 CCAAAACCAGCGCCAAAGAA 59.896 50.000 2.29 0.00 0.00 2.52
1712 1766 2.415512 GCGCCAAAGAACAGGTAAGTAG 59.584 50.000 0.00 0.00 0.00 2.57
1987 2135 3.644966 AGGTTCAAAACACAGACAGGA 57.355 42.857 0.00 0.00 0.00 3.86
2030 2178 7.270047 CAGAAAAATAAGACATGATGGGCAAT 58.730 34.615 0.00 0.00 0.00 3.56
2047 2195 4.346129 GGCAATCATCACACGAAAGATTC 58.654 43.478 0.00 0.00 31.37 2.52
2125 2362 9.525826 AATCTTGAGGACATAAAAGAATGAACT 57.474 29.630 0.00 0.00 32.72 3.01
2126 2363 8.924511 TCTTGAGGACATAAAAGAATGAACTT 57.075 30.769 0.00 0.00 0.00 2.66
2238 2475 8.378172 TGAATTATTTAGAGGCTAAACCATCG 57.622 34.615 2.07 0.00 43.14 3.84
2266 2555 0.314578 CGATGATTGAACGCGTCAGC 60.315 55.000 14.44 7.75 37.61 4.26
2267 2556 1.002366 GATGATTGAACGCGTCAGCT 58.998 50.000 14.44 0.00 42.32 4.24
2311 2613 7.759489 AAATGGTCTGCACTGATTTAAGTAA 57.241 32.000 0.00 0.00 0.00 2.24
2391 2746 5.514914 CAGCGCGTTATCCAAATGTTAAATT 59.485 36.000 8.43 0.00 0.00 1.82
2402 2757 9.603921 ATCCAAATGTTAAATTTTATGCCTCAG 57.396 29.630 0.00 0.00 0.00 3.35
2432 2901 1.300963 CCCTGCTGGCTGTGTGTAT 59.699 57.895 3.63 0.00 0.00 2.29
2443 2912 2.159707 GCTGTGTGTATTTACCGTGCAG 60.160 50.000 0.00 0.00 0.00 4.41
2646 3118 2.900273 GGTCATAGCCTCGGTGCA 59.100 61.111 0.11 0.00 0.00 4.57
2736 3208 1.899814 TCGTTCCCTGTGACTGCTATT 59.100 47.619 0.00 0.00 0.00 1.73
2901 3373 2.032178 GCTGACCATAAGAACAATCCGC 59.968 50.000 0.00 0.00 0.00 5.54
3044 3516 1.381165 GCGTTGGTGAACAAGGGTGT 61.381 55.000 5.00 0.00 43.36 4.16
3213 4136 2.691526 CCCTTGATGTGATTCATGGTGG 59.308 50.000 0.00 0.00 38.60 4.61
3222 4153 2.213499 GATTCATGGTGGCTTACTCGG 58.787 52.381 0.00 0.00 0.00 4.63
3230 4161 0.392461 TGGCTTACTCGGTTCATGGC 60.392 55.000 0.00 0.00 0.00 4.40
3233 4164 1.278238 CTTACTCGGTTCATGGCGTC 58.722 55.000 0.00 0.00 0.00 5.19
3237 4168 1.135083 ACTCGGTTCATGGCGTCTTAG 60.135 52.381 0.00 0.00 0.00 2.18
3243 4174 2.672961 TCATGGCGTCTTAGTCCTTG 57.327 50.000 0.00 0.00 0.00 3.61
3267 4198 8.276252 TGCGAAGGTTCTTAAATAAAAGCTAT 57.724 30.769 0.00 0.00 31.02 2.97
3287 4220 5.278022 GCTATGGCTTGTTAATGTTCCTAGC 60.278 44.000 0.00 0.00 35.22 3.42
3678 4642 4.641541 CCTTACACATTCATCTCATGCCAA 59.358 41.667 0.00 0.00 0.00 4.52
3959 4924 4.224370 GGTCTCACCAAAGTCTAACCCATA 59.776 45.833 0.00 0.00 38.42 2.74
4079 5044 4.079787 AGGCTACACACATGATTTGGGTAT 60.080 41.667 0.00 0.00 41.13 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 9.443323 ACTTTTACATACTTTTGGCAACTTTTT 57.557 25.926 0.00 0.00 37.61 1.94
22 23 9.443323 AACTTTTACATACTTTTGGCAACTTTT 57.557 25.926 0.00 0.00 37.61 2.27
23 24 8.878769 CAACTTTTACATACTTTTGGCAACTTT 58.121 29.630 0.00 0.00 37.61 2.66
24 25 8.038351 ACAACTTTTACATACTTTTGGCAACTT 58.962 29.630 0.00 0.00 37.61 2.66
25 26 7.552459 ACAACTTTTACATACTTTTGGCAACT 58.448 30.769 0.00 0.00 37.61 3.16
26 27 7.764695 ACAACTTTTACATACTTTTGGCAAC 57.235 32.000 0.00 0.00 0.00 4.17
27 28 8.904834 TCTACAACTTTTACATACTTTTGGCAA 58.095 29.630 0.00 0.00 0.00 4.52
28 29 8.453238 TCTACAACTTTTACATACTTTTGGCA 57.547 30.769 0.00 0.00 0.00 4.92
29 30 9.908152 ATTCTACAACTTTTACATACTTTTGGC 57.092 29.630 0.00 0.00 0.00 4.52
39 40 8.465999 CCATGCCAATATTCTACAACTTTTACA 58.534 33.333 0.00 0.00 0.00 2.41
40 41 8.682710 TCCATGCCAATATTCTACAACTTTTAC 58.317 33.333 0.00 0.00 0.00 2.01
41 42 8.815565 TCCATGCCAATATTCTACAACTTTTA 57.184 30.769 0.00 0.00 0.00 1.52
42 43 7.716799 TCCATGCCAATATTCTACAACTTTT 57.283 32.000 0.00 0.00 0.00 2.27
43 44 7.178274 TGTTCCATGCCAATATTCTACAACTTT 59.822 33.333 0.00 0.00 0.00 2.66
44 45 6.663093 TGTTCCATGCCAATATTCTACAACTT 59.337 34.615 0.00 0.00 0.00 2.66
45 46 6.186957 TGTTCCATGCCAATATTCTACAACT 58.813 36.000 0.00 0.00 0.00 3.16
46 47 6.449635 TGTTCCATGCCAATATTCTACAAC 57.550 37.500 0.00 0.00 0.00 3.32
47 48 7.658525 ATTGTTCCATGCCAATATTCTACAA 57.341 32.000 0.00 0.00 29.78 2.41
48 49 8.759481 TTATTGTTCCATGCCAATATTCTACA 57.241 30.769 9.90 0.00 34.48 2.74
90 91 1.513178 CGCAAAGCTGATACGTCTACG 59.487 52.381 0.00 0.04 46.33 3.51
91 92 1.852895 CCGCAAAGCTGATACGTCTAC 59.147 52.381 0.00 0.00 0.00 2.59
92 93 1.475280 ACCGCAAAGCTGATACGTCTA 59.525 47.619 0.00 0.00 0.00 2.59
93 94 0.246635 ACCGCAAAGCTGATACGTCT 59.753 50.000 0.00 0.00 0.00 4.18
94 95 0.370273 CACCGCAAAGCTGATACGTC 59.630 55.000 0.00 0.00 0.00 4.34
95 96 1.635663 GCACCGCAAAGCTGATACGT 61.636 55.000 0.00 0.00 0.00 3.57
96 97 1.060937 GCACCGCAAAGCTGATACG 59.939 57.895 0.00 0.00 0.00 3.06
97 98 1.305219 TGGCACCGCAAAGCTGATAC 61.305 55.000 0.00 0.00 0.00 2.24
98 99 1.002746 TGGCACCGCAAAGCTGATA 60.003 52.632 0.00 0.00 0.00 2.15
99 100 2.282391 TGGCACCGCAAAGCTGAT 60.282 55.556 0.00 0.00 0.00 2.90
100 101 3.286751 GTGGCACCGCAAAGCTGA 61.287 61.111 6.29 0.00 0.00 4.26
101 102 3.594775 TGTGGCACCGCAAAGCTG 61.595 61.111 16.26 0.00 33.12 4.24
102 103 3.595758 GTGTGGCACCGCAAAGCT 61.596 61.111 16.26 0.00 38.24 3.74
103 104 3.898509 TGTGTGGCACCGCAAAGC 61.899 61.111 16.26 0.00 38.24 3.51
104 105 2.026014 GTGTGTGGCACCGCAAAG 59.974 61.111 16.26 0.00 42.10 2.77
105 106 3.882013 CGTGTGTGGCACCGCAAA 61.882 61.111 16.26 0.00 44.97 3.68
117 118 4.619227 AAGGGGTGGACGCGTGTG 62.619 66.667 20.70 0.00 37.07 3.82
118 119 4.619227 CAAGGGGTGGACGCGTGT 62.619 66.667 20.70 0.00 36.89 4.49
119 120 4.619227 ACAAGGGGTGGACGCGTG 62.619 66.667 20.70 0.01 44.78 5.34
120 121 4.309950 GACAAGGGGTGGACGCGT 62.310 66.667 13.85 13.85 37.07 6.01
124 125 4.717313 GGCCGACAAGGGGTGGAC 62.717 72.222 0.00 0.00 41.48 4.02
125 126 4.974438 AGGCCGACAAGGGGTGGA 62.974 66.667 0.00 0.00 41.48 4.02
126 127 4.722700 CAGGCCGACAAGGGGTGG 62.723 72.222 0.00 0.00 41.48 4.61
131 132 4.711949 AGCTGCAGGCCGACAAGG 62.712 66.667 17.12 0.00 43.05 3.61
132 133 3.429141 CAGCTGCAGGCCGACAAG 61.429 66.667 17.12 0.00 43.05 3.16
161 162 3.083600 GATCTGGCGTTTCCGTGCG 62.084 63.158 0.00 0.00 37.80 5.34
162 163 2.750888 GGATCTGGCGTTTCCGTGC 61.751 63.158 0.00 0.00 37.80 5.34
163 164 2.106683 GGGATCTGGCGTTTCCGTG 61.107 63.158 0.00 0.00 37.80 4.94
164 165 2.119484 TTGGGATCTGGCGTTTCCGT 62.119 55.000 0.00 0.00 37.80 4.69
165 166 1.376683 TTGGGATCTGGCGTTTCCG 60.377 57.895 0.00 0.00 37.80 4.30
166 167 1.313091 GGTTGGGATCTGGCGTTTCC 61.313 60.000 0.00 0.00 0.00 3.13
167 168 1.644786 CGGTTGGGATCTGGCGTTTC 61.645 60.000 0.00 0.00 0.00 2.78
168 169 1.674322 CGGTTGGGATCTGGCGTTT 60.674 57.895 0.00 0.00 0.00 3.60
169 170 2.046314 CGGTTGGGATCTGGCGTT 60.046 61.111 0.00 0.00 0.00 4.84
170 171 2.890766 AACGGTTGGGATCTGGCGT 61.891 57.895 0.00 0.00 0.00 5.68
171 172 2.046314 AACGGTTGGGATCTGGCG 60.046 61.111 0.00 0.00 0.00 5.69
172 173 2.700773 GCAACGGTTGGGATCTGGC 61.701 63.158 21.37 1.59 0.00 4.85
173 174 2.046285 GGCAACGGTTGGGATCTGG 61.046 63.158 21.37 0.00 0.00 3.86
174 175 2.046285 GGGCAACGGTTGGGATCTG 61.046 63.158 21.37 0.00 37.60 2.90
175 176 2.355115 GGGCAACGGTTGGGATCT 59.645 61.111 21.37 0.00 37.60 2.75
176 177 3.131478 CGGGCAACGGTTGGGATC 61.131 66.667 21.37 5.45 39.42 3.36
195 196 4.133796 GCTTCGCCCATGGTTGGC 62.134 66.667 11.73 6.17 45.70 4.52
196 197 1.606885 AATGCTTCGCCCATGGTTGG 61.607 55.000 11.73 0.00 43.23 3.77
197 198 0.458889 CAATGCTTCGCCCATGGTTG 60.459 55.000 11.73 2.19 0.00 3.77
198 199 0.899717 ACAATGCTTCGCCCATGGTT 60.900 50.000 11.73 0.00 0.00 3.67
199 200 0.034574 TACAATGCTTCGCCCATGGT 60.035 50.000 11.73 0.00 31.96 3.55
200 201 1.267806 GATACAATGCTTCGCCCATGG 59.732 52.381 4.14 4.14 0.00 3.66
201 202 2.224606 AGATACAATGCTTCGCCCATG 58.775 47.619 0.00 0.00 0.00 3.66
202 203 2.158769 TGAGATACAATGCTTCGCCCAT 60.159 45.455 0.00 0.00 0.00 4.00
203 204 1.209261 TGAGATACAATGCTTCGCCCA 59.791 47.619 0.00 0.00 0.00 5.36
204 205 1.599542 GTGAGATACAATGCTTCGCCC 59.400 52.381 0.00 0.00 0.00 6.13
205 206 2.030946 GTGTGAGATACAATGCTTCGCC 59.969 50.000 0.00 0.00 41.89 5.54
206 207 2.030946 GGTGTGAGATACAATGCTTCGC 59.969 50.000 0.00 0.00 41.89 4.70
207 208 2.609459 GGGTGTGAGATACAATGCTTCG 59.391 50.000 0.00 0.00 41.89 3.79
208 209 3.375299 GTGGGTGTGAGATACAATGCTTC 59.625 47.826 0.00 0.00 41.89 3.86
209 210 3.347216 GTGGGTGTGAGATACAATGCTT 58.653 45.455 0.00 0.00 41.89 3.91
210 211 2.356125 GGTGGGTGTGAGATACAATGCT 60.356 50.000 0.00 0.00 41.89 3.79
211 212 2.017049 GGTGGGTGTGAGATACAATGC 58.983 52.381 0.00 0.00 41.89 3.56
212 213 3.535561 GAGGTGGGTGTGAGATACAATG 58.464 50.000 0.00 0.00 41.89 2.82
213 214 2.505819 GGAGGTGGGTGTGAGATACAAT 59.494 50.000 0.00 0.00 41.89 2.71
214 215 1.906574 GGAGGTGGGTGTGAGATACAA 59.093 52.381 0.00 0.00 41.89 2.41
215 216 1.568504 GGAGGTGGGTGTGAGATACA 58.431 55.000 0.00 0.00 36.82 2.29
216 217 0.831307 GGGAGGTGGGTGTGAGATAC 59.169 60.000 0.00 0.00 0.00 2.24
217 218 0.326238 GGGGAGGTGGGTGTGAGATA 60.326 60.000 0.00 0.00 0.00 1.98
218 219 1.616628 GGGGAGGTGGGTGTGAGAT 60.617 63.158 0.00 0.00 0.00 2.75
219 220 1.448814 TAGGGGAGGTGGGTGTGAGA 61.449 60.000 0.00 0.00 0.00 3.27
220 221 1.080354 TAGGGGAGGTGGGTGTGAG 59.920 63.158 0.00 0.00 0.00 3.51
221 222 1.229400 GTAGGGGAGGTGGGTGTGA 60.229 63.158 0.00 0.00 0.00 3.58
222 223 1.131303 TTGTAGGGGAGGTGGGTGTG 61.131 60.000 0.00 0.00 0.00 3.82
223 224 0.840722 CTTGTAGGGGAGGTGGGTGT 60.841 60.000 0.00 0.00 0.00 4.16
224 225 0.546747 TCTTGTAGGGGAGGTGGGTG 60.547 60.000 0.00 0.00 0.00 4.61
225 226 0.546988 GTCTTGTAGGGGAGGTGGGT 60.547 60.000 0.00 0.00 0.00 4.51
226 227 1.614241 CGTCTTGTAGGGGAGGTGGG 61.614 65.000 0.00 0.00 0.00 4.61
227 228 0.613853 TCGTCTTGTAGGGGAGGTGG 60.614 60.000 0.00 0.00 0.00 4.61
228 229 0.531200 GTCGTCTTGTAGGGGAGGTG 59.469 60.000 0.00 0.00 0.00 4.00
229 230 0.614134 GGTCGTCTTGTAGGGGAGGT 60.614 60.000 0.00 0.00 0.00 3.85
230 231 1.664321 CGGTCGTCTTGTAGGGGAGG 61.664 65.000 0.00 0.00 0.00 4.30
231 232 1.807886 CGGTCGTCTTGTAGGGGAG 59.192 63.158 0.00 0.00 0.00 4.30
232 233 2.345760 GCGGTCGTCTTGTAGGGGA 61.346 63.158 0.00 0.00 0.00 4.81
233 234 2.183555 GCGGTCGTCTTGTAGGGG 59.816 66.667 0.00 0.00 0.00 4.79
234 235 2.183555 GGCGGTCGTCTTGTAGGG 59.816 66.667 0.00 0.00 0.00 3.53
235 236 2.202570 CGGCGGTCGTCTTGTAGG 60.203 66.667 0.00 0.00 0.00 3.18
236 237 2.879462 GCGGCGGTCGTCTTGTAG 60.879 66.667 9.78 0.00 41.72 2.74
237 238 3.210223 TTGCGGCGGTCGTCTTGTA 62.210 57.895 9.78 0.00 41.72 2.41
238 239 4.595538 TTGCGGCGGTCGTCTTGT 62.596 61.111 9.78 0.00 41.72 3.16
239 240 3.777925 CTTGCGGCGGTCGTCTTG 61.778 66.667 9.78 0.00 41.72 3.02
242 243 4.814294 ATCCTTGCGGCGGTCGTC 62.814 66.667 9.78 0.00 41.72 4.20
243 244 3.894547 AAATCCTTGCGGCGGTCGT 62.895 57.895 9.78 0.00 41.72 4.34
244 245 3.124921 AAATCCTTGCGGCGGTCG 61.125 61.111 9.78 0.00 42.76 4.79
245 246 2.485122 CAAATCCTTGCGGCGGTC 59.515 61.111 9.78 0.00 0.00 4.79
253 254 1.200020 GTCTTCACCGGCAAATCCTTG 59.800 52.381 0.00 0.00 35.49 3.61
254 255 1.534729 GTCTTCACCGGCAAATCCTT 58.465 50.000 0.00 0.00 0.00 3.36
255 256 0.673644 CGTCTTCACCGGCAAATCCT 60.674 55.000 0.00 0.00 0.00 3.24
256 257 1.794222 CGTCTTCACCGGCAAATCC 59.206 57.895 0.00 0.00 0.00 3.01
257 258 1.134694 GCGTCTTCACCGGCAAATC 59.865 57.895 0.00 0.00 0.00 2.17
258 259 3.263941 GCGTCTTCACCGGCAAAT 58.736 55.556 0.00 0.00 0.00 2.32
263 264 2.432628 GAGTGGCGTCTTCACCGG 60.433 66.667 0.00 0.00 35.87 5.28
264 265 2.805353 CGAGTGGCGTCTTCACCG 60.805 66.667 0.00 0.00 35.87 4.94
265 266 3.112709 GCGAGTGGCGTCTTCACC 61.113 66.667 0.00 0.00 43.41 4.02
307 308 4.081030 CAAGTCTGCGGTGCTGCG 62.081 66.667 0.00 0.00 37.81 5.18
308 309 3.730761 CCAAGTCTGCGGTGCTGC 61.731 66.667 0.00 0.00 0.00 5.25
309 310 2.031012 TCCAAGTCTGCGGTGCTG 59.969 61.111 0.00 0.00 0.00 4.41
310 311 2.345244 CTCCAAGTCTGCGGTGCT 59.655 61.111 0.00 0.00 0.00 4.40
311 312 2.527951 ATCCTCCAAGTCTGCGGTGC 62.528 60.000 0.00 0.00 0.00 5.01
312 313 0.036010 AATCCTCCAAGTCTGCGGTG 60.036 55.000 0.00 0.00 0.00 4.94
313 314 0.250513 GAATCCTCCAAGTCTGCGGT 59.749 55.000 0.00 0.00 0.00 5.68
314 315 0.807667 CGAATCCTCCAAGTCTGCGG 60.808 60.000 0.00 0.00 0.00 5.69
315 316 1.424493 GCGAATCCTCCAAGTCTGCG 61.424 60.000 0.00 0.00 0.00 5.18
316 317 1.092345 GGCGAATCCTCCAAGTCTGC 61.092 60.000 0.00 0.00 0.00 4.26
317 318 0.462759 GGGCGAATCCTCCAAGTCTG 60.463 60.000 0.00 0.00 34.39 3.51
318 319 0.618968 AGGGCGAATCCTCCAAGTCT 60.619 55.000 0.00 0.00 29.56 3.24
319 320 0.462759 CAGGGCGAATCCTCCAAGTC 60.463 60.000 0.00 0.00 34.31 3.01
320 321 1.604378 CAGGGCGAATCCTCCAAGT 59.396 57.895 0.00 0.00 34.31 3.16
321 322 1.821332 GCAGGGCGAATCCTCCAAG 60.821 63.158 0.00 0.00 34.31 3.61
322 323 2.272146 GCAGGGCGAATCCTCCAA 59.728 61.111 0.00 0.00 34.31 3.53
323 324 3.797353 GGCAGGGCGAATCCTCCA 61.797 66.667 0.00 0.00 34.31 3.86
324 325 4.570874 GGGCAGGGCGAATCCTCC 62.571 72.222 0.00 0.00 34.31 4.30
325 326 4.570874 GGGGCAGGGCGAATCCTC 62.571 72.222 0.00 0.00 34.31 3.71
339 340 4.609018 ATCTTCGATGCGGCGGGG 62.609 66.667 9.78 0.00 0.00 5.73
340 341 3.038417 GATCTTCGATGCGGCGGG 61.038 66.667 9.78 0.00 0.00 6.13
341 342 3.038417 GGATCTTCGATGCGGCGG 61.038 66.667 9.78 0.00 0.00 6.13
342 343 3.038417 GGGATCTTCGATGCGGCG 61.038 66.667 0.51 0.51 0.00 6.46
343 344 2.666526 GGGGATCTTCGATGCGGC 60.667 66.667 0.00 0.00 0.00 6.53
344 345 1.005630 GAGGGGATCTTCGATGCGG 60.006 63.158 0.00 0.00 0.00 5.69
345 346 0.390860 AAGAGGGGATCTTCGATGCG 59.609 55.000 0.00 0.00 45.50 4.73
353 354 1.324014 TGAGGAGGAAGAGGGGATCT 58.676 55.000 0.00 0.00 41.27 2.75
354 355 1.765904 GTTGAGGAGGAAGAGGGGATC 59.234 57.143 0.00 0.00 0.00 3.36
355 356 1.367848 AGTTGAGGAGGAAGAGGGGAT 59.632 52.381 0.00 0.00 0.00 3.85
356 357 0.793617 AGTTGAGGAGGAAGAGGGGA 59.206 55.000 0.00 0.00 0.00 4.81
357 358 1.199615 GAGTTGAGGAGGAAGAGGGG 58.800 60.000 0.00 0.00 0.00 4.79
358 359 1.199615 GGAGTTGAGGAGGAAGAGGG 58.800 60.000 0.00 0.00 0.00 4.30
359 360 1.199615 GGGAGTTGAGGAGGAAGAGG 58.800 60.000 0.00 0.00 0.00 3.69
360 361 1.199615 GGGGAGTTGAGGAGGAAGAG 58.800 60.000 0.00 0.00 0.00 2.85
361 362 0.252742 GGGGGAGTTGAGGAGGAAGA 60.253 60.000 0.00 0.00 0.00 2.87
362 363 0.547712 TGGGGGAGTTGAGGAGGAAG 60.548 60.000 0.00 0.00 0.00 3.46
363 364 0.547712 CTGGGGGAGTTGAGGAGGAA 60.548 60.000 0.00 0.00 0.00 3.36
364 365 1.081092 CTGGGGGAGTTGAGGAGGA 59.919 63.158 0.00 0.00 0.00 3.71
365 366 2.674220 GCTGGGGGAGTTGAGGAGG 61.674 68.421 0.00 0.00 0.00 4.30
366 367 1.920325 TGCTGGGGGAGTTGAGGAG 60.920 63.158 0.00 0.00 0.00 3.69
367 368 2.206900 TGCTGGGGGAGTTGAGGA 59.793 61.111 0.00 0.00 0.00 3.71
368 369 2.352805 GTGCTGGGGGAGTTGAGG 59.647 66.667 0.00 0.00 0.00 3.86
369 370 2.352805 GGTGCTGGGGGAGTTGAG 59.647 66.667 0.00 0.00 0.00 3.02
370 371 3.256960 GGGTGCTGGGGGAGTTGA 61.257 66.667 0.00 0.00 0.00 3.18
371 372 3.574074 CTGGGTGCTGGGGGAGTTG 62.574 68.421 0.00 0.00 0.00 3.16
372 373 3.260100 CTGGGTGCTGGGGGAGTT 61.260 66.667 0.00 0.00 0.00 3.01
373 374 3.810687 TTCTGGGTGCTGGGGGAGT 62.811 63.158 0.00 0.00 0.00 3.85
374 375 2.935481 TTCTGGGTGCTGGGGGAG 60.935 66.667 0.00 0.00 0.00 4.30
375 376 3.256960 GTTCTGGGTGCTGGGGGA 61.257 66.667 0.00 0.00 0.00 4.81
376 377 3.574074 CTGTTCTGGGTGCTGGGGG 62.574 68.421 0.00 0.00 0.00 5.40
377 378 2.034687 CTGTTCTGGGTGCTGGGG 59.965 66.667 0.00 0.00 0.00 4.96
378 379 2.034687 CCTGTTCTGGGTGCTGGG 59.965 66.667 0.00 0.00 0.00 4.45
379 380 2.674380 GCCTGTTCTGGGTGCTGG 60.674 66.667 0.00 0.00 0.00 4.85
380 381 2.674380 GGCCTGTTCTGGGTGCTG 60.674 66.667 0.00 0.00 0.00 4.41
381 382 4.335647 CGGCCTGTTCTGGGTGCT 62.336 66.667 0.00 0.00 0.00 4.40
436 437 3.633116 AACCTTCACCGTCGGGGG 61.633 66.667 14.96 12.80 41.60 5.40
437 438 2.358247 CAACCTTCACCGTCGGGG 60.358 66.667 17.28 12.77 43.62 5.73
438 439 3.047877 GCAACCTTCACCGTCGGG 61.048 66.667 17.28 4.77 40.11 5.14
439 440 3.411351 CGCAACCTTCACCGTCGG 61.411 66.667 10.48 10.48 0.00 4.79
440 441 4.072088 GCGCAACCTTCACCGTCG 62.072 66.667 0.30 0.00 0.00 5.12
441 442 3.723348 GGCGCAACCTTCACCGTC 61.723 66.667 10.83 0.00 34.51 4.79
479 480 0.329596 CAGTCTCCTCCCCCAAAAGG 59.670 60.000 0.00 0.00 0.00 3.11
480 481 0.322906 GCAGTCTCCTCCCCCAAAAG 60.323 60.000 0.00 0.00 0.00 2.27
481 482 0.772124 AGCAGTCTCCTCCCCCAAAA 60.772 55.000 0.00 0.00 0.00 2.44
482 483 0.118346 TAGCAGTCTCCTCCCCCAAA 59.882 55.000 0.00 0.00 0.00 3.28
483 484 0.325671 CTAGCAGTCTCCTCCCCCAA 60.326 60.000 0.00 0.00 0.00 4.12
484 485 1.311403 CTAGCAGTCTCCTCCCCCA 59.689 63.158 0.00 0.00 0.00 4.96
485 486 2.137528 GCTAGCAGTCTCCTCCCCC 61.138 68.421 10.63 0.00 0.00 5.40
486 487 2.494530 CGCTAGCAGTCTCCTCCCC 61.495 68.421 16.45 0.00 0.00 4.81
487 488 2.494530 CCGCTAGCAGTCTCCTCCC 61.495 68.421 16.45 0.00 0.00 4.30
488 489 2.494530 CCCGCTAGCAGTCTCCTCC 61.495 68.421 16.45 0.00 0.00 4.30
489 490 1.454111 TCCCGCTAGCAGTCTCCTC 60.454 63.158 16.45 0.00 0.00 3.71
490 491 1.755008 GTCCCGCTAGCAGTCTCCT 60.755 63.158 16.45 0.00 0.00 3.69
491 492 2.809010 GTCCCGCTAGCAGTCTCC 59.191 66.667 16.45 0.00 0.00 3.71
492 493 2.113433 TCGTCCCGCTAGCAGTCTC 61.113 63.158 16.45 0.00 0.00 3.36
493 494 2.045242 TCGTCCCGCTAGCAGTCT 60.045 61.111 16.45 0.00 0.00 3.24
494 495 2.102553 GTCGTCCCGCTAGCAGTC 59.897 66.667 16.45 2.28 0.00 3.51
495 496 3.812019 CGTCGTCCCGCTAGCAGT 61.812 66.667 16.45 0.00 0.00 4.40
496 497 4.554363 CCGTCGTCCCGCTAGCAG 62.554 72.222 16.45 2.56 0.00 4.24
519 520 2.978010 CAACACGGAAGGCGCCTT 60.978 61.111 40.90 40.90 39.23 4.35
524 525 3.365265 CTGGGCAACACGGAAGGC 61.365 66.667 0.00 0.00 39.74 4.35
525 526 2.672996 CCTGGGCAACACGGAAGG 60.673 66.667 0.00 0.00 39.74 3.46
526 527 3.365265 GCCTGGGCAACACGGAAG 61.365 66.667 6.75 0.00 41.49 3.46
536 537 2.985847 GAGGTTGTGTGCCTGGGC 60.986 66.667 4.43 4.43 36.29 5.36
537 538 2.669569 CGAGGTTGTGTGCCTGGG 60.670 66.667 0.00 0.00 36.29 4.45
538 539 3.357079 GCGAGGTTGTGTGCCTGG 61.357 66.667 0.00 0.00 36.29 4.45
539 540 2.281070 AGCGAGGTTGTGTGCCTG 60.281 61.111 0.00 0.00 36.29 4.85
540 541 2.031163 GAGCGAGGTTGTGTGCCT 59.969 61.111 0.00 0.00 39.42 4.75
541 542 3.050275 GGAGCGAGGTTGTGTGCC 61.050 66.667 0.00 0.00 0.00 5.01
542 543 3.050275 GGGAGCGAGGTTGTGTGC 61.050 66.667 0.00 0.00 0.00 4.57
543 544 2.358737 GGGGAGCGAGGTTGTGTG 60.359 66.667 0.00 0.00 0.00 3.82
544 545 2.847234 TGGGGAGCGAGGTTGTGT 60.847 61.111 0.00 0.00 0.00 3.72
545 546 2.358737 GTGGGGAGCGAGGTTGTG 60.359 66.667 0.00 0.00 0.00 3.33
546 547 4.003788 CGTGGGGAGCGAGGTTGT 62.004 66.667 0.00 0.00 0.00 3.32
547 548 4.760047 CCGTGGGGAGCGAGGTTG 62.760 72.222 0.00 0.00 34.06 3.77
551 552 1.464376 ATATGACCGTGGGGAGCGAG 61.464 60.000 0.00 0.00 36.97 5.03
552 553 1.456892 ATATGACCGTGGGGAGCGA 60.457 57.895 0.00 0.00 36.97 4.93
553 554 1.006102 GATATGACCGTGGGGAGCG 60.006 63.158 0.00 0.00 36.97 5.03
554 555 0.249911 GTGATATGACCGTGGGGAGC 60.250 60.000 0.00 0.00 36.97 4.70
555 556 1.069204 CAGTGATATGACCGTGGGGAG 59.931 57.143 0.00 0.00 36.97 4.30
556 557 1.119684 CAGTGATATGACCGTGGGGA 58.880 55.000 0.00 0.00 36.97 4.81
557 558 1.119684 TCAGTGATATGACCGTGGGG 58.880 55.000 0.00 0.00 40.11 4.96
558 559 2.225068 GTCAGTGATATGACCGTGGG 57.775 55.000 0.00 0.00 43.12 4.61
565 566 2.369860 GGCCCATGAGTCAGTGATATGA 59.630 50.000 13.43 0.00 0.00 2.15
566 567 2.775890 GGCCCATGAGTCAGTGATATG 58.224 52.381 0.00 2.27 0.00 1.78
567 568 1.345741 CGGCCCATGAGTCAGTGATAT 59.654 52.381 0.00 0.00 0.00 1.63
568 569 0.752658 CGGCCCATGAGTCAGTGATA 59.247 55.000 0.00 0.00 0.00 2.15
569 570 1.524002 CGGCCCATGAGTCAGTGAT 59.476 57.895 0.00 0.00 0.00 3.06
570 571 2.659063 CCGGCCCATGAGTCAGTGA 61.659 63.158 0.00 0.00 0.00 3.41
571 572 1.976132 ATCCGGCCCATGAGTCAGTG 61.976 60.000 0.00 0.00 0.00 3.66
572 573 0.398522 TATCCGGCCCATGAGTCAGT 60.399 55.000 0.00 0.00 0.00 3.41
573 574 0.979665 ATATCCGGCCCATGAGTCAG 59.020 55.000 0.00 0.00 0.00 3.51
574 575 0.686789 CATATCCGGCCCATGAGTCA 59.313 55.000 0.00 0.00 0.00 3.41
575 576 0.036010 CCATATCCGGCCCATGAGTC 60.036 60.000 0.00 0.00 0.00 3.36
576 577 0.768221 ACCATATCCGGCCCATGAGT 60.768 55.000 0.00 0.00 0.00 3.41
577 578 0.321919 CACCATATCCGGCCCATGAG 60.322 60.000 0.00 0.00 0.00 2.90
578 579 0.766288 TCACCATATCCGGCCCATGA 60.766 55.000 0.00 0.00 0.00 3.07
579 580 0.321919 CTCACCATATCCGGCCCATG 60.322 60.000 0.00 0.00 0.00 3.66
580 581 0.768221 ACTCACCATATCCGGCCCAT 60.768 55.000 0.00 0.00 0.00 4.00
581 582 1.383943 ACTCACCATATCCGGCCCA 60.384 57.895 0.00 0.00 0.00 5.36
582 583 1.071471 CACTCACCATATCCGGCCC 59.929 63.158 0.00 0.00 0.00 5.80
583 584 1.598130 GCACTCACCATATCCGGCC 60.598 63.158 0.00 0.00 0.00 6.13
584 585 1.598130 GGCACTCACCATATCCGGC 60.598 63.158 0.00 0.00 0.00 6.13
585 586 1.300931 CGGCACTCACCATATCCGG 60.301 63.158 0.00 0.00 33.85 5.14
586 587 1.300931 CCGGCACTCACCATATCCG 60.301 63.158 0.00 0.00 36.90 4.18
587 588 0.249911 GACCGGCACTCACCATATCC 60.250 60.000 0.00 0.00 0.00 2.59
588 589 0.464036 TGACCGGCACTCACCATATC 59.536 55.000 0.00 0.00 0.00 1.63
589 590 0.465705 CTGACCGGCACTCACCATAT 59.534 55.000 0.00 0.00 0.00 1.78
590 591 0.902984 ACTGACCGGCACTCACCATA 60.903 55.000 0.00 0.00 0.00 2.74
591 592 2.172483 GACTGACCGGCACTCACCAT 62.172 60.000 0.00 0.00 0.00 3.55
592 593 2.842462 ACTGACCGGCACTCACCA 60.842 61.111 0.00 0.00 0.00 4.17
593 594 2.048127 GACTGACCGGCACTCACC 60.048 66.667 0.00 0.00 0.00 4.02
594 595 2.048127 GGACTGACCGGCACTCAC 60.048 66.667 0.00 0.00 0.00 3.51
595 596 2.523168 TGGACTGACCGGCACTCA 60.523 61.111 0.00 0.00 42.61 3.41
596 597 2.262915 CTGGACTGACCGGCACTC 59.737 66.667 0.00 0.00 42.61 3.51
597 598 3.314331 CCTGGACTGACCGGCACT 61.314 66.667 0.00 0.00 43.37 4.40
601 602 3.530910 AAACGCCTGGACTGACCGG 62.531 63.158 0.00 0.00 44.27 5.28
602 603 2.030562 AAACGCCTGGACTGACCG 59.969 61.111 0.00 0.00 42.61 4.79
603 604 1.966451 CCAAACGCCTGGACTGACC 60.966 63.158 0.00 0.00 38.96 4.02
604 605 2.617274 GCCAAACGCCTGGACTGAC 61.617 63.158 7.54 0.00 38.96 3.51
605 606 2.281484 GCCAAACGCCTGGACTGA 60.281 61.111 7.54 0.00 38.96 3.41
614 615 1.334869 CTTCATATCTGGGCCAAACGC 59.665 52.381 8.04 0.00 0.00 4.84
615 616 2.874701 CTCTTCATATCTGGGCCAAACG 59.125 50.000 8.04 0.00 0.00 3.60
616 617 2.620585 GCTCTTCATATCTGGGCCAAAC 59.379 50.000 8.04 0.00 0.00 2.93
617 618 2.423373 GGCTCTTCATATCTGGGCCAAA 60.423 50.000 8.04 0.00 38.16 3.28
618 619 1.143684 GGCTCTTCATATCTGGGCCAA 59.856 52.381 8.04 0.00 38.16 4.52
619 620 0.767375 GGCTCTTCATATCTGGGCCA 59.233 55.000 5.85 5.85 38.16 5.36
620 621 0.037447 GGGCTCTTCATATCTGGGCC 59.963 60.000 0.00 0.00 37.61 5.80
621 622 0.767375 TGGGCTCTTCATATCTGGGC 59.233 55.000 0.00 0.00 0.00 5.36
622 623 2.053244 ACTGGGCTCTTCATATCTGGG 58.947 52.381 0.00 0.00 0.00 4.45
623 624 3.474600 CAACTGGGCTCTTCATATCTGG 58.525 50.000 0.00 0.00 0.00 3.86
624 625 3.474600 CCAACTGGGCTCTTCATATCTG 58.525 50.000 0.00 0.00 0.00 2.90
625 626 3.853355 CCAACTGGGCTCTTCATATCT 57.147 47.619 0.00 0.00 0.00 1.98
638 639 1.408702 CAGTTTTGACCACCCAACTGG 59.591 52.381 3.43 0.00 41.59 4.00
639 640 1.408702 CCAGTTTTGACCACCCAACTG 59.591 52.381 4.27 4.27 43.85 3.16
640 641 1.006639 ACCAGTTTTGACCACCCAACT 59.993 47.619 0.00 0.00 0.00 3.16
641 642 1.407618 GACCAGTTTTGACCACCCAAC 59.592 52.381 0.00 0.00 0.00 3.77
642 643 1.686741 GGACCAGTTTTGACCACCCAA 60.687 52.381 0.00 0.00 0.00 4.12
643 644 0.106419 GGACCAGTTTTGACCACCCA 60.106 55.000 0.00 0.00 0.00 4.51
644 645 1.170290 CGGACCAGTTTTGACCACCC 61.170 60.000 0.00 0.00 0.00 4.61
645 646 1.792118 GCGGACCAGTTTTGACCACC 61.792 60.000 0.00 0.00 0.00 4.61
646 647 1.098712 TGCGGACCAGTTTTGACCAC 61.099 55.000 0.00 0.00 0.00 4.16
647 648 1.098712 GTGCGGACCAGTTTTGACCA 61.099 55.000 0.00 0.00 0.00 4.02
648 649 1.098712 TGTGCGGACCAGTTTTGACC 61.099 55.000 4.04 0.00 0.00 4.02
649 650 0.307760 CTGTGCGGACCAGTTTTGAC 59.692 55.000 4.04 0.00 0.00 3.18
650 651 0.107410 ACTGTGCGGACCAGTTTTGA 60.107 50.000 4.04 0.00 40.14 2.69
651 652 0.029300 CACTGTGCGGACCAGTTTTG 59.971 55.000 4.04 0.00 41.10 2.44
652 653 0.107410 TCACTGTGCGGACCAGTTTT 60.107 50.000 4.04 0.00 41.10 2.43
653 654 0.814010 GTCACTGTGCGGACCAGTTT 60.814 55.000 4.04 0.00 41.10 2.66
654 655 1.227556 GTCACTGTGCGGACCAGTT 60.228 57.895 4.04 0.00 41.10 3.16
655 656 2.421739 GTCACTGTGCGGACCAGT 59.578 61.111 4.04 5.48 43.76 4.00
683 684 4.038080 CTTCCCAAACGCACGGGC 62.038 66.667 0.00 0.00 42.75 6.13
684 685 3.361977 CCTTCCCAAACGCACGGG 61.362 66.667 0.00 0.00 44.60 5.28
685 686 0.885596 TAACCTTCCCAAACGCACGG 60.886 55.000 0.00 0.00 0.00 4.94
686 687 1.135803 CATAACCTTCCCAAACGCACG 60.136 52.381 0.00 0.00 0.00 5.34
687 688 1.201414 CCATAACCTTCCCAAACGCAC 59.799 52.381 0.00 0.00 0.00 5.34
688 689 1.540267 CCATAACCTTCCCAAACGCA 58.460 50.000 0.00 0.00 0.00 5.24
689 690 0.815095 CCCATAACCTTCCCAAACGC 59.185 55.000 0.00 0.00 0.00 4.84
690 691 2.209690 ACCCATAACCTTCCCAAACG 57.790 50.000 0.00 0.00 0.00 3.60
691 692 4.267536 GACTACCCATAACCTTCCCAAAC 58.732 47.826 0.00 0.00 0.00 2.93
692 693 3.267551 GGACTACCCATAACCTTCCCAAA 59.732 47.826 0.00 0.00 34.14 3.28
693 694 2.848071 GGACTACCCATAACCTTCCCAA 59.152 50.000 0.00 0.00 34.14 4.12
694 695 2.484602 GGACTACCCATAACCTTCCCA 58.515 52.381 0.00 0.00 34.14 4.37
695 696 1.415289 CGGACTACCCATAACCTTCCC 59.585 57.143 0.00 0.00 34.14 3.97
696 697 2.113807 ACGGACTACCCATAACCTTCC 58.886 52.381 0.00 0.00 34.14 3.46
697 698 3.055602 ACAACGGACTACCCATAACCTTC 60.056 47.826 0.00 0.00 34.14 3.46
698 699 2.908351 ACAACGGACTACCCATAACCTT 59.092 45.455 0.00 0.00 34.14 3.50
699 700 2.543635 ACAACGGACTACCCATAACCT 58.456 47.619 0.00 0.00 34.14 3.50
700 701 3.701040 TCTACAACGGACTACCCATAACC 59.299 47.826 0.00 0.00 34.14 2.85
701 702 4.989279 TCTACAACGGACTACCCATAAC 57.011 45.455 0.00 0.00 34.14 1.89
702 703 4.202182 GCATCTACAACGGACTACCCATAA 60.202 45.833 0.00 0.00 34.14 1.90
703 704 3.319972 GCATCTACAACGGACTACCCATA 59.680 47.826 0.00 0.00 34.14 2.74
704 705 2.102588 GCATCTACAACGGACTACCCAT 59.897 50.000 0.00 0.00 34.14 4.00
705 706 1.479323 GCATCTACAACGGACTACCCA 59.521 52.381 0.00 0.00 34.14 4.51
706 707 1.755380 AGCATCTACAACGGACTACCC 59.245 52.381 0.00 0.00 0.00 3.69
707 708 3.081329 GAGCATCTACAACGGACTACC 57.919 52.381 0.00 0.00 0.00 3.18
721 722 6.018343 GGCTCAAATCAGTTAGTAAGAGCATC 60.018 42.308 15.72 1.64 46.59 3.91
722 723 5.819901 GGCTCAAATCAGTTAGTAAGAGCAT 59.180 40.000 15.72 0.00 46.59 3.79
723 724 5.178797 GGCTCAAATCAGTTAGTAAGAGCA 58.821 41.667 15.72 0.00 46.59 4.26
724 725 4.572795 GGGCTCAAATCAGTTAGTAAGAGC 59.427 45.833 0.00 0.00 44.69 4.09
725 726 4.806247 CGGGCTCAAATCAGTTAGTAAGAG 59.194 45.833 0.00 0.00 0.00 2.85
726 727 4.382685 CCGGGCTCAAATCAGTTAGTAAGA 60.383 45.833 0.00 0.00 0.00 2.10
727 728 3.871594 CCGGGCTCAAATCAGTTAGTAAG 59.128 47.826 0.00 0.00 0.00 2.34
728 729 3.262405 ACCGGGCTCAAATCAGTTAGTAA 59.738 43.478 6.32 0.00 0.00 2.24
729 730 2.835764 ACCGGGCTCAAATCAGTTAGTA 59.164 45.455 6.32 0.00 0.00 1.82
730 731 1.628846 ACCGGGCTCAAATCAGTTAGT 59.371 47.619 6.32 0.00 0.00 2.24
731 732 2.009774 CACCGGGCTCAAATCAGTTAG 58.990 52.381 6.32 0.00 0.00 2.34
732 733 1.626321 TCACCGGGCTCAAATCAGTTA 59.374 47.619 6.32 0.00 0.00 2.24
733 734 0.400213 TCACCGGGCTCAAATCAGTT 59.600 50.000 6.32 0.00 0.00 3.16
734 735 0.620556 ATCACCGGGCTCAAATCAGT 59.379 50.000 6.32 0.00 0.00 3.41
735 736 1.672881 GAATCACCGGGCTCAAATCAG 59.327 52.381 6.32 0.00 0.00 2.90
736 737 1.681780 GGAATCACCGGGCTCAAATCA 60.682 52.381 6.32 0.00 0.00 2.57
737 738 1.025041 GGAATCACCGGGCTCAAATC 58.975 55.000 6.32 0.00 0.00 2.17
738 739 0.331278 TGGAATCACCGGGCTCAAAT 59.669 50.000 6.32 0.00 42.61 2.32
739 740 0.322456 CTGGAATCACCGGGCTCAAA 60.322 55.000 6.32 0.00 41.14 2.69
740 741 1.299648 CTGGAATCACCGGGCTCAA 59.700 57.895 6.32 0.00 41.14 3.02
741 742 2.989639 CTGGAATCACCGGGCTCA 59.010 61.111 6.32 0.00 41.14 4.26
742 743 2.514824 GCTGGAATCACCGGGCTC 60.515 66.667 6.32 0.00 44.77 4.70
743 744 2.615227 GATGCTGGAATCACCGGGCT 62.615 60.000 6.32 0.00 44.77 5.19
744 745 2.124151 ATGCTGGAATCACCGGGC 60.124 61.111 6.32 0.00 44.77 6.13
745 746 0.179009 ATGATGCTGGAATCACCGGG 60.179 55.000 6.32 0.00 44.77 5.73
747 748 0.309922 GCATGATGCTGGAATCACCG 59.690 55.000 10.72 0.00 40.96 4.94
748 749 1.395635 TGCATGATGCTGGAATCACC 58.604 50.000 19.19 0.00 45.31 4.02
749 750 3.513680 TTTGCATGATGCTGGAATCAC 57.486 42.857 19.19 0.00 45.31 3.06
750 751 3.512329 AGTTTTGCATGATGCTGGAATCA 59.488 39.130 19.19 0.00 45.31 2.57
751 752 3.863424 CAGTTTTGCATGATGCTGGAATC 59.137 43.478 19.19 9.58 45.31 2.52
752 753 3.369052 CCAGTTTTGCATGATGCTGGAAT 60.369 43.478 19.19 0.48 45.31 3.01
753 754 2.028839 CCAGTTTTGCATGATGCTGGAA 60.029 45.455 19.19 8.02 45.31 3.53
754 755 1.546923 CCAGTTTTGCATGATGCTGGA 59.453 47.619 19.19 1.81 45.31 3.86
868 872 3.243670 GGGCGTGTACTTATAGGGAGTTC 60.244 52.174 0.00 0.00 0.00 3.01
872 876 2.457813 TGGGCGTGTACTTATAGGGA 57.542 50.000 0.00 0.00 0.00 4.20
873 877 2.805657 GCTTGGGCGTGTACTTATAGGG 60.806 54.545 0.00 0.00 0.00 3.53
938 957 1.432251 CGATCGGCTTCGTGGTACT 59.568 57.895 7.38 0.00 34.46 2.73
940 959 1.996786 GACCGATCGGCTTCGTGGTA 61.997 60.000 33.62 0.00 39.32 3.25
941 960 3.352338 GACCGATCGGCTTCGTGGT 62.352 63.158 33.62 11.98 39.32 4.16
942 961 2.582498 GACCGATCGGCTTCGTGG 60.582 66.667 33.62 8.15 39.32 4.94
1027 1050 1.927895 CTGGCTATGTCTCCAACGAC 58.072 55.000 0.00 0.00 34.52 4.34
1701 1754 2.183555 GGCGCGCTACTTACCTGT 59.816 61.111 32.29 0.00 0.00 4.00
1944 2092 7.334671 ACCTTGATAAAAATCTCGAGGAGTTTC 59.665 37.037 13.56 2.58 43.26 2.78
1946 2094 6.712276 ACCTTGATAAAAATCTCGAGGAGTT 58.288 36.000 13.56 2.20 43.26 3.01
1947 2095 6.301169 ACCTTGATAAAAATCTCGAGGAGT 57.699 37.500 13.56 0.00 43.26 3.85
1948 2096 6.818644 TGAACCTTGATAAAAATCTCGAGGAG 59.181 38.462 13.56 0.00 43.26 3.69
1953 2101 8.690840 GTGTTTTGAACCTTGATAAAAATCTCG 58.309 33.333 0.00 0.00 0.00 4.04
1987 2135 6.998968 TTTCTGGCACATTTTGACATTTTT 57.001 29.167 0.00 0.00 44.75 1.94
2047 2195 3.415457 AGTTTTTGGGCTCTCTCAGAG 57.585 47.619 0.00 0.00 45.04 3.35
2161 2398 6.934645 TAAGTCATTCTTTACCAAGTGGTCAG 59.065 38.462 6.18 4.84 41.40 3.51
2163 2400 7.923414 ATAAGTCATTCTTTACCAAGTGGTC 57.077 36.000 6.18 0.00 41.40 4.02
2172 2409 5.353123 TGCGGGTCAATAAGTCATTCTTTAC 59.647 40.000 0.00 0.00 37.56 2.01
2216 2453 7.990886 TGAACGATGGTTTAGCCTCTAAATAAT 59.009 33.333 0.00 1.05 36.24 1.28
2238 2475 2.159707 CGTTCAATCATCGTGGGTGAAC 60.160 50.000 15.83 15.83 42.89 3.18
2251 2540 0.179215 CCAAGCTGACGCGTTCAATC 60.179 55.000 15.53 0.00 42.32 2.67
2266 2555 8.028938 CCATTTTACACTTGTTATCCTTCCAAG 58.971 37.037 0.00 0.00 41.02 3.61
2267 2556 7.507616 ACCATTTTACACTTGTTATCCTTCCAA 59.492 33.333 0.00 0.00 0.00 3.53
2311 2613 2.439507 ACAACTCACAACATCCACTCCT 59.560 45.455 0.00 0.00 0.00 3.69
2391 2746 0.726827 CGCTTTCGCTGAGGCATAAA 59.273 50.000 0.00 0.00 38.60 1.40
2402 2757 4.543084 GCAGGGCATCGCTTTCGC 62.543 66.667 0.00 0.00 35.26 4.70
2432 2901 4.839668 ATTAACAAAGCTGCACGGTAAA 57.160 36.364 1.02 0.00 0.00 2.01
2631 3103 1.363807 CGATGCACCGAGGCTATGA 59.636 57.895 0.00 0.00 34.04 2.15
2646 3118 3.390521 TTGAGGGTGGCGAGCGAT 61.391 61.111 0.00 0.00 0.00 4.58
2736 3208 3.505790 ATGGGGGCTTGCGAACACA 62.506 57.895 0.00 0.00 0.00 3.72
2778 3250 1.347707 TCTGGGAATGAGTTGAACGCT 59.652 47.619 0.02 0.00 0.00 5.07
2901 3373 2.791503 CGGCATACGCATATACGGAGAG 60.792 54.545 0.00 0.00 41.24 3.20
3044 3516 2.874315 CGTTCGTGAGCGCATCGA 60.874 61.111 11.47 13.82 38.14 3.59
3213 4136 0.739813 ACGCCATGAACCGAGTAAGC 60.740 55.000 0.00 0.00 0.00 3.09
3222 4153 2.673368 CAAGGACTAAGACGCCATGAAC 59.327 50.000 0.00 0.00 0.00 3.18
3243 4174 7.644157 CCATAGCTTTTATTTAAGAACCTTCGC 59.356 37.037 0.00 0.00 0.00 4.70
3267 4198 4.027674 TGCTAGGAACATTAACAAGCCA 57.972 40.909 0.00 0.00 0.00 4.75
3349 4282 5.449041 CGATGGGAAGTGTTTCACCATATTG 60.449 44.000 0.00 0.00 40.96 1.90
3678 4642 1.076438 AAGACTAAAGCAAGCCCCCT 58.924 50.000 0.00 0.00 0.00 4.79
3889 4853 4.080356 ACCTTGGCAGACATTGAAGCTATA 60.080 41.667 0.00 0.00 0.00 1.31
4079 5044 8.449251 TGTCAATAATGTGCTAATCATGCTTA 57.551 30.769 0.00 0.00 0.00 3.09
4134 5099 3.491342 TGTTAGCATTAGGTTGTTGGCA 58.509 40.909 0.00 0.00 0.00 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.