Multiple sequence alignment - TraesCS1D01G266100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G266100 chr1D 100.000 2780 0 0 1 2780 361913398 361916177 0.000000e+00 5134.0
1 TraesCS1D01G266100 chr1D 89.008 373 33 6 1336 1702 361845116 361845486 3.260000e-124 455.0
2 TraesCS1D01G266100 chr1D 91.463 164 14 0 2020 2183 427827083 427826920 2.790000e-55 226.0
3 TraesCS1D01G266100 chr1D 80.317 315 43 16 896 1196 361844718 361845027 1.300000e-53 220.0
4 TraesCS1D01G266100 chr1D 86.139 101 5 3 2190 2281 361845748 361845848 1.760000e-17 100.0
5 TraesCS1D01G266100 chr1A 89.771 743 36 11 496 1224 461372202 461372918 0.000000e+00 915.0
6 TraesCS1D01G266100 chr1A 91.572 439 23 8 1269 1702 461372917 461373346 6.630000e-166 593.0
7 TraesCS1D01G266100 chr1A 83.163 588 51 22 1348 1924 461351547 461352097 6.920000e-136 494.0
8 TraesCS1D01G266100 chr1A 91.369 336 22 7 6 337 461371868 461372200 1.170000e-123 453.0
9 TraesCS1D01G266100 chr1A 92.623 244 13 5 1779 2019 461375009 461375250 2.050000e-91 346.0
10 TraesCS1D01G266100 chr1A 83.209 268 29 6 2190 2441 461375255 461375522 5.990000e-57 231.0
11 TraesCS1D01G266100 chr1A 95.522 67 2 1 2621 2687 461377776 461377841 3.790000e-19 106.0
12 TraesCS1D01G266100 chr1A 92.208 77 2 4 2706 2778 461377826 461377902 3.790000e-19 106.0
13 TraesCS1D01G266100 chr1A 97.778 45 1 0 2636 2680 461352655 461352699 8.260000e-11 78.7
14 TraesCS1D01G266100 chr1B 87.712 765 45 12 497 1229 484375753 484376500 0.000000e+00 846.0
15 TraesCS1D01G266100 chr1B 86.409 699 40 21 1328 2019 484376553 484377203 0.000000e+00 713.0
16 TraesCS1D01G266100 chr1B 91.243 354 24 6 1348 1695 484360727 484361079 2.510000e-130 475.0
17 TraesCS1D01G266100 chr1B 88.596 342 30 8 1 337 484375413 484375750 9.270000e-110 407.0
18 TraesCS1D01G266100 chr1B 91.071 168 14 1 2017 2183 546704471 546704304 2.790000e-55 226.0
19 TraesCS1D01G266100 chr1B 90.184 163 11 5 342 500 70500603 70500442 1.010000e-49 207.0
20 TraesCS1D01G266100 chr1B 87.821 156 14 4 2289 2441 648795792 648795945 7.910000e-41 178.0
21 TraesCS1D01G266100 chr1B 86.250 160 20 1 720 879 484352688 484352845 3.680000e-39 172.0
22 TraesCS1D01G266100 chr1B 89.167 120 11 1 1086 1203 484360516 484360635 6.200000e-32 148.0
23 TraesCS1D01G266100 chr1B 91.139 79 3 4 2706 2780 484377717 484377795 1.360000e-18 104.0
24 TraesCS1D01G266100 chr1B 95.385 65 1 2 2623 2687 484377670 484377732 4.900000e-18 102.0
25 TraesCS1D01G266100 chr1B 100.000 32 0 0 1234 1265 484376564 484376533 2.990000e-05 60.2
26 TraesCS1D01G266100 chr3D 94.444 162 9 0 2021 2182 540255705 540255544 1.650000e-62 250.0
27 TraesCS1D01G266100 chr3D 91.975 162 13 0 2021 2182 238999414 238999575 7.750000e-56 228.0
28 TraesCS1D01G266100 chr3D 91.975 162 8 5 339 497 104026066 104025907 3.600000e-54 222.0
29 TraesCS1D01G266100 chr3D 89.266 177 17 2 2006 2182 397162720 397162546 1.300000e-53 220.0
30 TraesCS1D01G266100 chr3D 89.881 168 13 4 339 502 449740443 449740276 2.170000e-51 213.0
31 TraesCS1D01G266100 chr3D 86.538 156 19 1 2288 2441 22093042 22092887 1.320000e-38 171.0
32 TraesCS1D01G266100 chr7B 92.073 164 13 0 2021 2184 710732166 710732003 5.990000e-57 231.0
33 TraesCS1D01G266100 chr7B 85.987 157 20 1 2287 2441 437931989 437932145 1.710000e-37 167.0
34 TraesCS1D01G266100 chr4B 92.025 163 13 0 2020 2182 63753840 63754002 2.150000e-56 230.0
35 TraesCS1D01G266100 chr4B 90.184 163 12 4 339 498 532435002 532435163 2.810000e-50 209.0
36 TraesCS1D01G266100 chr4B 89.759 166 12 4 339 499 360233646 360233811 1.010000e-49 207.0
37 TraesCS1D01G266100 chr4B 87.417 151 17 1 2293 2441 660120761 660120611 3.680000e-39 172.0
38 TraesCS1D01G266100 chr6B 89.011 182 18 2 2002 2182 555858568 555858748 1.000000e-54 224.0
39 TraesCS1D01G266100 chr4A 90.173 173 15 2 2021 2192 696729859 696730030 1.000000e-54 224.0
40 TraesCS1D01G266100 chr4A 86.076 158 18 3 2287 2441 742467271 742467427 1.710000e-37 167.0
41 TraesCS1D01G266100 chr3B 91.975 162 10 3 339 497 154663205 154663044 1.000000e-54 224.0
42 TraesCS1D01G266100 chr3B 86.076 158 18 3 2293 2447 107136342 107136186 1.710000e-37 167.0
43 TraesCS1D01G266100 chr4D 90.123 162 13 3 339 497 326382609 326382448 1.010000e-49 207.0
44 TraesCS1D01G266100 chr2A 87.845 181 16 5 326 502 184561326 184561148 1.010000e-49 207.0
45 TraesCS1D01G266100 chr5D 88.757 169 15 4 337 502 487413712 487413545 1.310000e-48 204.0
46 TraesCS1D01G266100 chr5D 82.394 142 25 0 1351 1492 517521472 517521331 1.050000e-24 124.0
47 TraesCS1D01G266100 chr3A 86.624 157 19 1 2290 2444 478426495 478426339 3.680000e-39 172.0
48 TraesCS1D01G266100 chr6D 85.714 161 20 2 2283 2441 196767287 196767446 1.710000e-37 167.0
49 TraesCS1D01G266100 chr5B 79.082 196 35 4 1362 1551 650045964 650045769 2.250000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G266100 chr1D 361913398 361916177 2779 False 5134.000000 5134 100.000000 1 2780 1 chr1D.!!$F1 2779
1 TraesCS1D01G266100 chr1D 361844718 361845848 1130 False 258.333333 455 85.154667 896 2281 3 chr1D.!!$F2 1385
2 TraesCS1D01G266100 chr1A 461371868 461377902 6034 False 392.857143 915 90.896286 6 2778 7 chr1A.!!$F2 2772
3 TraesCS1D01G266100 chr1A 461351547 461352699 1152 False 286.350000 494 90.470500 1348 2680 2 chr1A.!!$F1 1332
4 TraesCS1D01G266100 chr1B 484375413 484377795 2382 False 434.400000 846 89.848200 1 2780 5 chr1B.!!$F4 2779
5 TraesCS1D01G266100 chr1B 484360516 484361079 563 False 311.500000 475 90.205000 1086 1695 2 chr1B.!!$F3 609

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
351 360 0.169894 GACGTGTACTCCCTCCGTTC 59.830 60.0 0.0 0.0 0.0 3.95 F
355 364 0.178926 TGTACTCCCTCCGTTCCCAA 60.179 55.0 0.0 0.0 0.0 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1299 1389 0.390860 CGGGGGTGCAATCAAACAAA 59.609 50.000 0.0 0.0 0.0 2.83 R
2323 4584 1.134367 TGGTCCGTAGCGAAATCTCTG 59.866 52.381 0.0 0.0 0.0 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 8.138365 TCAAAATATAAGTCATAAGACCACGC 57.862 34.615 0.00 0.00 46.15 5.34
39 40 7.985184 TCAAAATATAAGTCATAAGACCACGCT 59.015 33.333 0.00 0.00 46.15 5.07
81 83 9.716507 ATATTGTTACTATGTTTCAACATTCGC 57.283 29.630 10.38 0.00 46.95 4.70
90 92 6.191534 TGTTTCAACATTCGCAATTTTACG 57.808 33.333 0.00 0.00 33.17 3.18
133 136 5.163854 ACAGCTGATGTGTATTTTCTTACGC 60.164 40.000 23.35 0.00 41.91 4.42
337 346 1.016627 CAGGGGCACATAATGACGTG 58.983 55.000 0.00 0.00 37.09 4.49
340 349 1.937899 GGGGCACATAATGACGTGTAC 59.062 52.381 0.00 0.00 37.09 2.90
341 350 2.419574 GGGGCACATAATGACGTGTACT 60.420 50.000 0.00 0.00 37.09 2.73
342 351 2.864343 GGGCACATAATGACGTGTACTC 59.136 50.000 0.00 0.00 37.09 2.59
343 352 2.864343 GGCACATAATGACGTGTACTCC 59.136 50.000 0.00 0.00 35.51 3.85
344 353 2.864343 GCACATAATGACGTGTACTCCC 59.136 50.000 0.00 0.00 35.51 4.30
345 354 3.430374 GCACATAATGACGTGTACTCCCT 60.430 47.826 0.00 0.00 35.51 4.20
346 355 4.360563 CACATAATGACGTGTACTCCCTC 58.639 47.826 0.00 0.00 0.00 4.30
347 356 3.383825 ACATAATGACGTGTACTCCCTCC 59.616 47.826 0.00 0.00 0.00 4.30
348 357 0.815734 AATGACGTGTACTCCCTCCG 59.184 55.000 0.00 0.00 0.00 4.63
349 358 0.323178 ATGACGTGTACTCCCTCCGT 60.323 55.000 0.00 0.00 0.00 4.69
350 359 0.538057 TGACGTGTACTCCCTCCGTT 60.538 55.000 0.00 0.00 0.00 4.44
351 360 0.169894 GACGTGTACTCCCTCCGTTC 59.830 60.000 0.00 0.00 0.00 3.95
352 361 1.246737 ACGTGTACTCCCTCCGTTCC 61.247 60.000 0.00 0.00 0.00 3.62
353 362 1.895966 GTGTACTCCCTCCGTTCCC 59.104 63.158 0.00 0.00 0.00 3.97
354 363 0.901580 GTGTACTCCCTCCGTTCCCA 60.902 60.000 0.00 0.00 0.00 4.37
355 364 0.178926 TGTACTCCCTCCGTTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
356 365 0.978907 GTACTCCCTCCGTTCCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
357 366 1.558294 GTACTCCCTCCGTTCCCAAAT 59.442 52.381 0.00 0.00 0.00 2.32
358 367 0.328258 ACTCCCTCCGTTCCCAAATG 59.672 55.000 0.00 0.00 0.00 2.32
359 368 0.328258 CTCCCTCCGTTCCCAAATGT 59.672 55.000 0.00 0.00 0.00 2.71
360 369 1.557832 CTCCCTCCGTTCCCAAATGTA 59.442 52.381 0.00 0.00 0.00 2.29
361 370 1.986631 TCCCTCCGTTCCCAAATGTAA 59.013 47.619 0.00 0.00 0.00 2.41
362 371 2.026636 TCCCTCCGTTCCCAAATGTAAG 60.027 50.000 0.00 0.00 0.00 2.34
363 372 2.290705 CCCTCCGTTCCCAAATGTAAGT 60.291 50.000 0.00 0.00 0.00 2.24
364 373 3.007635 CCTCCGTTCCCAAATGTAAGTC 58.992 50.000 0.00 0.00 0.00 3.01
365 374 3.307480 CCTCCGTTCCCAAATGTAAGTCT 60.307 47.826 0.00 0.00 0.00 3.24
366 375 4.324267 CTCCGTTCCCAAATGTAAGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
367 376 4.721132 TCCGTTCCCAAATGTAAGTCTTT 58.279 39.130 0.00 0.00 0.00 2.52
368 377 5.134661 TCCGTTCCCAAATGTAAGTCTTTT 58.865 37.500 0.00 0.00 0.00 2.27
369 378 5.595133 TCCGTTCCCAAATGTAAGTCTTTTT 59.405 36.000 0.00 0.00 0.00 1.94
370 379 6.771749 TCCGTTCCCAAATGTAAGTCTTTTTA 59.228 34.615 0.00 0.00 0.00 1.52
371 380 7.040961 TCCGTTCCCAAATGTAAGTCTTTTTAG 60.041 37.037 0.00 0.00 0.00 1.85
372 381 7.040961 CCGTTCCCAAATGTAAGTCTTTTTAGA 60.041 37.037 0.00 0.00 0.00 2.10
373 382 8.015658 CGTTCCCAAATGTAAGTCTTTTTAGAG 58.984 37.037 0.00 0.00 0.00 2.43
374 383 9.063615 GTTCCCAAATGTAAGTCTTTTTAGAGA 57.936 33.333 0.00 0.00 0.00 3.10
375 384 9.807921 TTCCCAAATGTAAGTCTTTTTAGAGAT 57.192 29.630 0.00 0.00 0.00 2.75
376 385 9.807921 TCCCAAATGTAAGTCTTTTTAGAGATT 57.192 29.630 0.00 0.00 0.00 2.40
407 416 6.981762 AGACTACATTCAGAGCAAAATGAG 57.018 37.500 2.36 0.00 36.57 2.90
408 417 6.471146 AGACTACATTCAGAGCAAAATGAGT 58.529 36.000 2.36 2.26 36.57 3.41
409 418 6.370994 AGACTACATTCAGAGCAAAATGAGTG 59.629 38.462 2.36 4.97 38.64 3.51
410 419 6.233434 ACTACATTCAGAGCAAAATGAGTGA 58.767 36.000 4.93 0.00 36.83 3.41
411 420 6.712095 ACTACATTCAGAGCAAAATGAGTGAA 59.288 34.615 4.93 0.00 36.83 3.18
412 421 6.585695 ACATTCAGAGCAAAATGAGTGAAT 57.414 33.333 4.93 0.00 36.83 2.57
413 422 6.989659 ACATTCAGAGCAAAATGAGTGAATT 58.010 32.000 4.93 0.00 36.83 2.17
414 423 8.114331 ACATTCAGAGCAAAATGAGTGAATTA 57.886 30.769 4.93 0.00 36.83 1.40
415 424 8.025445 ACATTCAGAGCAAAATGAGTGAATTAC 58.975 33.333 4.93 0.00 36.83 1.89
416 425 7.509141 TTCAGAGCAAAATGAGTGAATTACA 57.491 32.000 0.00 0.00 0.00 2.41
440 449 8.322091 ACACTCTAAATATGCCTATATTCACCC 58.678 37.037 0.00 0.00 38.27 4.61
441 450 8.321353 CACTCTAAATATGCCTATATTCACCCA 58.679 37.037 0.00 0.00 38.27 4.51
442 451 9.062367 ACTCTAAATATGCCTATATTCACCCAT 57.938 33.333 0.00 0.00 38.27 4.00
449 458 7.755666 ATGCCTATATTCACCCATATGTAGT 57.244 36.000 1.24 0.00 0.00 2.73
450 459 7.568128 TGCCTATATTCACCCATATGTAGTT 57.432 36.000 1.24 0.00 0.00 2.24
451 460 7.620880 TGCCTATATTCACCCATATGTAGTTC 58.379 38.462 1.24 0.00 0.00 3.01
452 461 7.236640 TGCCTATATTCACCCATATGTAGTTCA 59.763 37.037 1.24 0.00 0.00 3.18
453 462 8.267894 GCCTATATTCACCCATATGTAGTTCAT 58.732 37.037 1.24 0.00 40.25 2.57
460 469 9.913310 TTCACCCATATGTAGTTCATATTCAAA 57.087 29.630 1.24 0.00 44.49 2.69
491 500 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
492 501 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
493 502 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
494 503 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
495 504 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
496 505 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
513 522 8.851145 GGAGGGAGTATTATTTTTCAATTCCTC 58.149 37.037 0.00 0.00 35.22 3.71
544 553 9.030452 AGATCATCTTACATTATAGTCCTGTCC 57.970 37.037 0.00 0.00 0.00 4.02
545 554 8.964533 ATCATCTTACATTATAGTCCTGTCCT 57.035 34.615 0.00 0.00 0.00 3.85
546 555 8.783660 TCATCTTACATTATAGTCCTGTCCTT 57.216 34.615 0.00 0.00 0.00 3.36
547 556 8.642432 TCATCTTACATTATAGTCCTGTCCTTG 58.358 37.037 0.00 0.00 0.00 3.61
548 557 7.973048 TCTTACATTATAGTCCTGTCCTTGT 57.027 36.000 0.00 0.00 0.00 3.16
549 558 8.008513 TCTTACATTATAGTCCTGTCCTTGTC 57.991 38.462 0.00 0.00 0.00 3.18
550 559 7.839705 TCTTACATTATAGTCCTGTCCTTGTCT 59.160 37.037 0.00 0.00 0.00 3.41
551 560 6.472686 ACATTATAGTCCTGTCCTTGTCTC 57.527 41.667 0.00 0.00 0.00 3.36
593 602 7.171447 TGTTTCATAATTTTTGGCAACTTCG 57.829 32.000 0.00 0.00 37.61 3.79
614 623 0.245539 CACCGTCGGAACCACATACT 59.754 55.000 20.51 0.00 0.00 2.12
627 636 4.978083 CCACATACTGGTTCGTAGTAGT 57.022 45.455 0.00 0.00 34.42 2.73
630 639 6.261118 CCACATACTGGTTCGTAGTAGTAAC 58.739 44.000 0.00 0.00 34.42 2.50
631 640 6.094603 CCACATACTGGTTCGTAGTAGTAACT 59.905 42.308 0.00 0.00 36.08 2.24
632 641 7.280876 CCACATACTGGTTCGTAGTAGTAACTA 59.719 40.741 0.00 0.00 34.65 2.24
633 642 8.834465 CACATACTGGTTCGTAGTAGTAACTAT 58.166 37.037 0.00 0.00 40.30 2.12
688 697 3.024547 TGCTAGGTACACTGAGGTGATC 58.975 50.000 3.06 0.00 45.61 2.92
697 706 2.579787 GAGGTGATCGGACGTGCG 60.580 66.667 24.40 24.40 0.00 5.34
718 744 3.307674 GCACGCAACATGAAGAATCAAA 58.692 40.909 0.00 0.00 39.49 2.69
749 775 2.538939 GCTTCGGCGCGAATAGAAATTT 60.539 45.455 12.10 0.00 44.85 1.82
1028 1069 1.277557 AGAGTTGCTTGTAGCTCTGGG 59.722 52.381 4.56 0.00 42.97 4.45
1031 1072 2.028020 AGTTGCTTGTAGCTCTGGGTAC 60.028 50.000 0.00 0.00 42.97 3.34
1070 1120 3.878778 ACCATCATTAGACAGGACAAGC 58.121 45.455 0.00 0.00 0.00 4.01
1072 1122 3.370846 CCATCATTAGACAGGACAAGCCA 60.371 47.826 0.00 0.00 40.02 4.75
1074 1124 4.574674 TCATTAGACAGGACAAGCCAAT 57.425 40.909 0.00 0.00 40.02 3.16
1075 1125 4.922206 TCATTAGACAGGACAAGCCAATT 58.078 39.130 0.00 0.00 40.02 2.32
1087 1137 2.729378 GCCAATTGCTTTGCTCGAC 58.271 52.632 0.00 0.00 36.87 4.20
1211 1264 2.736890 GCCTTTTTGTATGGCGTGC 58.263 52.632 0.00 0.00 37.33 5.34
1215 1268 2.414559 CCTTTTTGTATGGCGTGCAGAG 60.415 50.000 0.00 0.00 0.00 3.35
1225 1285 2.073816 GGCGTGCAGAGTTTAGCTTAA 58.926 47.619 0.00 0.00 0.00 1.85
1227 1287 3.058501 GGCGTGCAGAGTTTAGCTTAAAA 60.059 43.478 0.00 0.00 0.00 1.52
1228 1288 4.151798 GCGTGCAGAGTTTAGCTTAAAAG 58.848 43.478 0.00 0.00 0.00 2.27
1229 1289 4.712763 CGTGCAGAGTTTAGCTTAAAAGG 58.287 43.478 0.00 0.00 0.00 3.11
1230 1290 4.378459 CGTGCAGAGTTTAGCTTAAAAGGG 60.378 45.833 0.00 0.00 0.00 3.95
1231 1291 4.760204 GTGCAGAGTTTAGCTTAAAAGGGA 59.240 41.667 0.00 0.00 0.00 4.20
1232 1292 5.416013 GTGCAGAGTTTAGCTTAAAAGGGAT 59.584 40.000 0.00 0.00 0.00 3.85
1233 1293 6.598064 GTGCAGAGTTTAGCTTAAAAGGGATA 59.402 38.462 0.00 0.00 0.00 2.59
1234 1294 7.283354 GTGCAGAGTTTAGCTTAAAAGGGATAT 59.717 37.037 0.00 0.00 0.00 1.63
1235 1295 7.499232 TGCAGAGTTTAGCTTAAAAGGGATATC 59.501 37.037 0.00 0.00 0.00 1.63
1236 1296 7.499232 GCAGAGTTTAGCTTAAAAGGGATATCA 59.501 37.037 4.83 0.00 0.00 2.15
1237 1297 9.396022 CAGAGTTTAGCTTAAAAGGGATATCAA 57.604 33.333 4.83 0.00 0.00 2.57
1238 1298 9.975218 AGAGTTTAGCTTAAAAGGGATATCAAA 57.025 29.630 4.83 0.00 0.00 2.69
1262 1322 9.802039 AAATTAGTTAATCACCTTACAAGACCA 57.198 29.630 0.00 0.00 0.00 4.02
1263 1323 9.975218 AATTAGTTAATCACCTTACAAGACCAT 57.025 29.630 0.00 0.00 0.00 3.55
1264 1324 9.614792 ATTAGTTAATCACCTTACAAGACCATC 57.385 33.333 0.00 0.00 0.00 3.51
1265 1325 6.415573 AGTTAATCACCTTACAAGACCATCC 58.584 40.000 0.00 0.00 0.00 3.51
1266 1326 3.933861 ATCACCTTACAAGACCATCCC 57.066 47.619 0.00 0.00 0.00 3.85
1267 1327 2.915869 TCACCTTACAAGACCATCCCT 58.084 47.619 0.00 0.00 0.00 4.20
1286 1363 5.537188 TCCCTTTTGACATGCATTTGTTAC 58.463 37.500 0.00 0.00 0.00 2.50
1479 1569 1.306141 TGGAGACGAGCCCCAAGAT 60.306 57.895 0.00 0.00 0.00 2.40
1551 1641 1.585668 CTGCAAGAAGTACTGATCGCG 59.414 52.381 0.00 0.00 34.07 5.87
1559 1649 1.658409 TACTGATCGCGCATGCTCG 60.658 57.895 23.45 23.45 39.65 5.03
1688 1794 7.143340 TCGTCGTTATCTTTTCTTCTTCTTCA 58.857 34.615 0.00 0.00 0.00 3.02
1689 1795 7.326305 TCGTCGTTATCTTTTCTTCTTCTTCAG 59.674 37.037 0.00 0.00 0.00 3.02
1690 1796 7.326305 CGTCGTTATCTTTTCTTCTTCTTCAGA 59.674 37.037 0.00 0.00 0.00 3.27
1756 1877 5.483811 TCCGTGAATAAGCACTTGTATCAA 58.516 37.500 0.00 0.00 36.65 2.57
1764 1885 9.185192 GAATAAGCACTTGTATCAATTTATGCC 57.815 33.333 0.00 0.00 32.19 4.40
1831 3565 1.991121 TGTACTGTCCAGTTCCGAGT 58.009 50.000 5.10 0.00 42.54 4.18
1834 3570 3.890756 TGTACTGTCCAGTTCCGAGTAAA 59.109 43.478 5.10 0.00 42.54 2.01
1861 3597 1.202927 ACTGTCCAGTTCCAATGGTGG 60.203 52.381 0.00 0.00 38.83 4.61
1931 3667 2.253403 GAGTCGGGCTAACAAGGGGG 62.253 65.000 0.00 0.00 0.00 5.40
1939 3675 2.496070 GGCTAACAAGGGGGTCATTTTC 59.504 50.000 0.00 0.00 0.00 2.29
1944 3680 5.536497 AACAAGGGGGTCATTTTCTCTAT 57.464 39.130 0.00 0.00 0.00 1.98
2007 4065 4.654389 AGTAGCGGGTACTCCAGTATAT 57.346 45.455 13.79 0.00 37.41 0.86
2019 4077 8.305317 GGTACTCCAGTATATTCCATTACTGAC 58.695 40.741 10.77 2.61 45.25 3.51
2022 4080 9.080097 ACTCCAGTATATTCCATTACTGACTAC 57.920 37.037 10.77 0.00 45.25 2.73
2023 4081 9.303116 CTCCAGTATATTCCATTACTGACTACT 57.697 37.037 10.77 0.00 45.25 2.57
2024 4082 9.298250 TCCAGTATATTCCATTACTGACTACTC 57.702 37.037 10.77 0.00 45.25 2.59
2025 4083 9.303116 CCAGTATATTCCATTACTGACTACTCT 57.697 37.037 10.77 0.00 45.25 3.24
2029 4087 6.969993 ATTCCATTACTGACTACTCTCTCC 57.030 41.667 0.00 0.00 0.00 3.71
2030 4088 4.452825 TCCATTACTGACTACTCTCTCCG 58.547 47.826 0.00 0.00 0.00 4.63
2031 4089 4.080469 TCCATTACTGACTACTCTCTCCGT 60.080 45.833 0.00 0.00 0.00 4.69
2032 4090 4.641094 CCATTACTGACTACTCTCTCCGTT 59.359 45.833 0.00 0.00 0.00 4.44
2033 4091 5.220892 CCATTACTGACTACTCTCTCCGTTC 60.221 48.000 0.00 0.00 0.00 3.95
2034 4092 2.713877 ACTGACTACTCTCTCCGTTCC 58.286 52.381 0.00 0.00 0.00 3.62
2035 4093 2.306512 ACTGACTACTCTCTCCGTTCCT 59.693 50.000 0.00 0.00 0.00 3.36
2036 4094 3.518705 ACTGACTACTCTCTCCGTTCCTA 59.481 47.826 0.00 0.00 0.00 2.94
2037 4095 4.019501 ACTGACTACTCTCTCCGTTCCTAA 60.020 45.833 0.00 0.00 0.00 2.69
2038 4096 4.914983 TGACTACTCTCTCCGTTCCTAAA 58.085 43.478 0.00 0.00 0.00 1.85
2039 4097 5.507637 TGACTACTCTCTCCGTTCCTAAAT 58.492 41.667 0.00 0.00 0.00 1.40
2040 4098 6.656902 TGACTACTCTCTCCGTTCCTAAATA 58.343 40.000 0.00 0.00 0.00 1.40
2041 4099 7.288560 TGACTACTCTCTCCGTTCCTAAATAT 58.711 38.462 0.00 0.00 0.00 1.28
2042 4100 8.435187 TGACTACTCTCTCCGTTCCTAAATATA 58.565 37.037 0.00 0.00 0.00 0.86
2043 4101 9.282569 GACTACTCTCTCCGTTCCTAAATATAA 57.717 37.037 0.00 0.00 0.00 0.98
2044 4102 9.287373 ACTACTCTCTCCGTTCCTAAATATAAG 57.713 37.037 0.00 0.00 0.00 1.73
2045 4103 9.287373 CTACTCTCTCCGTTCCTAAATATAAGT 57.713 37.037 0.00 0.00 0.00 2.24
2046 4104 8.168790 ACTCTCTCCGTTCCTAAATATAAGTC 57.831 38.462 0.00 0.00 0.00 3.01
2047 4105 8.000127 ACTCTCTCCGTTCCTAAATATAAGTCT 59.000 37.037 0.00 0.00 0.00 3.24
2048 4106 8.763984 TCTCTCCGTTCCTAAATATAAGTCTT 57.236 34.615 0.00 0.00 0.00 3.01
2049 4107 9.198475 TCTCTCCGTTCCTAAATATAAGTCTTT 57.802 33.333 0.00 0.00 0.00 2.52
2050 4108 9.250624 CTCTCCGTTCCTAAATATAAGTCTTTG 57.749 37.037 0.00 0.00 0.00 2.77
2051 4109 8.755977 TCTCCGTTCCTAAATATAAGTCTTTGT 58.244 33.333 0.00 0.00 0.00 2.83
2069 4127 9.712359 AGTCTTTGTAAAAATTTCACTACGAAC 57.288 29.630 0.00 0.00 31.73 3.95
2070 4128 8.950961 GTCTTTGTAAAAATTTCACTACGAACC 58.049 33.333 0.00 0.00 31.73 3.62
2071 4129 8.675504 TCTTTGTAAAAATTTCACTACGAACCA 58.324 29.630 0.00 0.00 31.73 3.67
2072 4130 8.617761 TTTGTAAAAATTTCACTACGAACCAC 57.382 30.769 0.00 0.00 31.73 4.16
2073 4131 7.317842 TGTAAAAATTTCACTACGAACCACA 57.682 32.000 0.00 0.00 31.73 4.17
2074 4132 7.932335 TGTAAAAATTTCACTACGAACCACAT 58.068 30.769 0.00 0.00 31.73 3.21
2075 4133 9.053840 TGTAAAAATTTCACTACGAACCACATA 57.946 29.630 0.00 0.00 31.73 2.29
2076 4134 9.321590 GTAAAAATTTCACTACGAACCACATAC 57.678 33.333 0.00 0.00 31.73 2.39
2077 4135 5.773239 AATTTCACTACGAACCACATACG 57.227 39.130 0.00 0.00 31.73 3.06
2078 4136 2.925578 TCACTACGAACCACATACGG 57.074 50.000 0.00 0.00 0.00 4.02
2079 4137 2.435422 TCACTACGAACCACATACGGA 58.565 47.619 0.00 0.00 0.00 4.69
2080 4138 3.018856 TCACTACGAACCACATACGGAT 58.981 45.455 0.00 0.00 0.00 4.18
2081 4139 3.113322 CACTACGAACCACATACGGATG 58.887 50.000 5.94 5.94 39.16 3.51
2082 4140 8.455080 TTTCACTACGAACCACATACGGATGT 62.455 42.308 7.68 7.68 39.09 3.06
2083 4141 3.947196 ACTACGAACCACATACGGATGTA 59.053 43.478 14.23 0.00 44.82 2.29
2084 4142 4.581824 ACTACGAACCACATACGGATGTAT 59.418 41.667 14.23 1.38 44.82 2.29
2099 4157 7.658179 ACGGATGTATGTAGATGCATTTTAG 57.342 36.000 0.00 1.10 35.26 1.85
2100 4158 7.441836 ACGGATGTATGTAGATGCATTTTAGA 58.558 34.615 0.00 0.00 35.26 2.10
2101 4159 8.097038 ACGGATGTATGTAGATGCATTTTAGAT 58.903 33.333 0.00 4.02 35.26 1.98
2102 4160 8.939929 CGGATGTATGTAGATGCATTTTAGATT 58.060 33.333 0.00 0.00 35.26 2.40
2113 4171 9.624373 AGATGCATTTTAGATTACAGATTCACT 57.376 29.630 0.00 0.00 0.00 3.41
2114 4172 9.875675 GATGCATTTTAGATTACAGATTCACTC 57.124 33.333 0.00 0.00 0.00 3.51
2115 4173 8.791327 TGCATTTTAGATTACAGATTCACTCA 57.209 30.769 0.00 0.00 0.00 3.41
2116 4174 9.399797 TGCATTTTAGATTACAGATTCACTCAT 57.600 29.630 0.00 0.00 0.00 2.90
2122 4180 7.934855 AGATTACAGATTCACTCATTTTGCT 57.065 32.000 0.00 0.00 0.00 3.91
2123 4181 7.983307 AGATTACAGATTCACTCATTTTGCTC 58.017 34.615 0.00 0.00 0.00 4.26
2124 4182 6.500684 TTACAGATTCACTCATTTTGCTCC 57.499 37.500 0.00 0.00 0.00 4.70
2125 4183 3.438087 ACAGATTCACTCATTTTGCTCCG 59.562 43.478 0.00 0.00 0.00 4.63
2126 4184 3.438087 CAGATTCACTCATTTTGCTCCGT 59.562 43.478 0.00 0.00 0.00 4.69
2127 4185 4.631377 CAGATTCACTCATTTTGCTCCGTA 59.369 41.667 0.00 0.00 0.00 4.02
2128 4186 5.295292 CAGATTCACTCATTTTGCTCCGTAT 59.705 40.000 0.00 0.00 0.00 3.06
2129 4187 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2130 4188 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2131 4189 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2132 4190 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2133 4191 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2134 4192 5.351465 CACTCATTTTGCTCCGTATGTAGTT 59.649 40.000 0.00 0.00 0.00 2.24
2135 4193 5.581085 ACTCATTTTGCTCCGTATGTAGTTC 59.419 40.000 0.00 0.00 0.00 3.01
2136 4194 5.483811 TCATTTTGCTCCGTATGTAGTTCA 58.516 37.500 0.00 0.00 0.00 3.18
2137 4195 6.112734 TCATTTTGCTCCGTATGTAGTTCAT 58.887 36.000 0.00 0.00 40.25 2.57
2138 4196 7.269316 TCATTTTGCTCCGTATGTAGTTCATA 58.731 34.615 0.00 0.00 37.91 2.15
2139 4197 7.438160 TCATTTTGCTCCGTATGTAGTTCATAG 59.562 37.037 0.00 0.00 39.36 2.23
2140 4198 5.847111 TTGCTCCGTATGTAGTTCATAGT 57.153 39.130 0.00 0.00 39.36 2.12
2141 4199 6.947644 TTGCTCCGTATGTAGTTCATAGTA 57.052 37.500 0.00 0.00 39.36 1.82
2142 4200 6.555812 TGCTCCGTATGTAGTTCATAGTAG 57.444 41.667 0.00 0.00 39.36 2.57
2143 4201 6.293698 TGCTCCGTATGTAGTTCATAGTAGA 58.706 40.000 0.00 0.00 39.36 2.59
2144 4202 6.769341 TGCTCCGTATGTAGTTCATAGTAGAA 59.231 38.462 0.00 0.00 39.36 2.10
2145 4203 7.447545 TGCTCCGTATGTAGTTCATAGTAGAAT 59.552 37.037 0.00 0.00 39.36 2.40
2146 4204 7.964011 GCTCCGTATGTAGTTCATAGTAGAATC 59.036 40.741 0.00 0.00 39.36 2.52
2147 4205 9.221933 CTCCGTATGTAGTTCATAGTAGAATCT 57.778 37.037 0.00 0.00 39.36 2.40
2148 4206 9.217278 TCCGTATGTAGTTCATAGTAGAATCTC 57.783 37.037 0.00 0.00 39.36 2.75
2149 4207 9.221933 CCGTATGTAGTTCATAGTAGAATCTCT 57.778 37.037 0.00 0.00 39.36 3.10
2187 4245 8.672823 ATTTAGAAACGAAAGGAGTAGTTTGT 57.327 30.769 0.00 0.00 37.00 2.83
2188 4246 8.496707 TTTAGAAACGAAAGGAGTAGTTTGTT 57.503 30.769 0.00 0.00 37.00 2.83
2196 4254 6.238538 CGAAAGGAGTAGTTTGTTTTAGCCAA 60.239 38.462 0.00 0.00 0.00 4.52
2302 4560 4.866508 TGCAAATATACTACTCCCTCCG 57.133 45.455 0.00 0.00 0.00 4.63
2322 4583 6.862090 CCTCCGTTCCTAAATATAAGTCTTCG 59.138 42.308 0.00 0.00 0.00 3.79
2323 4584 6.211515 TCCGTTCCTAAATATAAGTCTTCGC 58.788 40.000 0.00 0.00 0.00 4.70
2333 4594 7.630470 AATATAAGTCTTCGCAGAGATTTCG 57.370 36.000 0.00 0.00 38.43 3.46
2337 4598 2.532317 GTCTTCGCAGAGATTTCGCTAC 59.468 50.000 0.00 0.00 38.43 3.58
2449 4723 9.495572 AAGACTTATATTTAGGAATAGTGCTGC 57.504 33.333 0.00 0.00 31.58 5.25
2450 4724 8.875168 AGACTTATATTTAGGAATAGTGCTGCT 58.125 33.333 0.00 0.00 31.58 4.24
2456 4730 9.877178 ATATTTAGGAATAGTGCTGCTATACAC 57.123 33.333 0.00 0.00 39.36 2.90
2457 4731 6.724893 TTAGGAATAGTGCTGCTATACACA 57.275 37.500 0.00 0.00 39.36 3.72
2458 4732 4.950050 AGGAATAGTGCTGCTATACACAC 58.050 43.478 0.00 0.00 39.36 3.82
2459 4733 3.736252 GGAATAGTGCTGCTATACACACG 59.264 47.826 0.00 0.00 39.36 4.49
2460 4734 4.499188 GGAATAGTGCTGCTATACACACGA 60.499 45.833 0.00 0.00 39.36 4.35
2461 4735 4.855715 ATAGTGCTGCTATACACACGAT 57.144 40.909 0.00 0.00 38.56 3.73
2462 4736 2.814269 AGTGCTGCTATACACACGATG 58.186 47.619 0.00 0.00 39.30 3.84
2463 4737 1.860950 GTGCTGCTATACACACGATGG 59.139 52.381 0.00 0.00 36.77 3.51
2464 4738 1.480545 TGCTGCTATACACACGATGGT 59.519 47.619 0.00 0.00 0.00 3.55
2465 4739 2.093711 TGCTGCTATACACACGATGGTT 60.094 45.455 0.00 0.00 0.00 3.67
2466 4740 2.936498 GCTGCTATACACACGATGGTTT 59.064 45.455 0.00 0.00 0.00 3.27
2467 4741 3.374058 GCTGCTATACACACGATGGTTTT 59.626 43.478 0.00 0.00 0.00 2.43
2468 4742 4.494199 GCTGCTATACACACGATGGTTTTC 60.494 45.833 0.00 0.00 0.00 2.29
2469 4743 4.570930 TGCTATACACACGATGGTTTTCA 58.429 39.130 0.00 0.00 0.00 2.69
2470 4744 4.998033 TGCTATACACACGATGGTTTTCAA 59.002 37.500 0.00 0.00 0.00 2.69
2471 4745 5.470437 TGCTATACACACGATGGTTTTCAAA 59.530 36.000 0.00 0.00 0.00 2.69
2472 4746 5.793457 GCTATACACACGATGGTTTTCAAAC 59.207 40.000 0.00 0.00 38.17 2.93
2473 4747 3.059634 ACACACGATGGTTTTCAAACG 57.940 42.857 0.00 0.00 39.77 3.60
2474 4748 2.678836 ACACACGATGGTTTTCAAACGA 59.321 40.909 0.00 0.00 39.77 3.85
2475 4749 3.314080 ACACACGATGGTTTTCAAACGAT 59.686 39.130 0.03 0.03 39.55 3.73
2476 4750 4.201970 ACACACGATGGTTTTCAAACGATT 60.202 37.500 1.98 0.00 37.44 3.34
2477 4751 4.737765 CACACGATGGTTTTCAAACGATTT 59.262 37.500 1.98 0.00 37.44 2.17
2478 4752 5.910166 CACACGATGGTTTTCAAACGATTTA 59.090 36.000 1.98 0.00 37.44 1.40
2479 4753 6.580791 CACACGATGGTTTTCAAACGATTTAT 59.419 34.615 1.98 0.00 37.44 1.40
2480 4754 6.580791 ACACGATGGTTTTCAAACGATTTATG 59.419 34.615 1.98 4.17 37.44 1.90
2481 4755 5.571357 ACGATGGTTTTCAAACGATTTATGC 59.429 36.000 1.98 0.00 37.44 3.14
2482 4756 5.570973 CGATGGTTTTCAAACGATTTATGCA 59.429 36.000 0.00 0.00 37.44 3.96
2483 4757 6.452350 CGATGGTTTTCAAACGATTTATGCAC 60.452 38.462 0.00 0.00 37.44 4.57
2484 4758 4.677378 TGGTTTTCAAACGATTTATGCACG 59.323 37.500 0.00 0.00 39.77 5.34
2485 4759 4.912766 GGTTTTCAAACGATTTATGCACGA 59.087 37.500 0.24 0.00 39.77 4.35
2486 4760 5.059221 GGTTTTCAAACGATTTATGCACGAG 59.941 40.000 0.24 0.00 39.77 4.18
2487 4761 5.599359 TTTCAAACGATTTATGCACGAGA 57.401 34.783 0.24 0.00 0.00 4.04
2488 4762 4.840401 TCAAACGATTTATGCACGAGAG 57.160 40.909 0.24 0.00 0.00 3.20
2501 4775 2.493713 ACGAGAGTGCATATCCGTTC 57.506 50.000 0.00 0.00 46.97 3.95
2502 4776 1.268589 ACGAGAGTGCATATCCGTTCG 60.269 52.381 0.00 0.13 46.97 3.95
2503 4777 1.268589 CGAGAGTGCATATCCGTTCGT 60.269 52.381 0.00 0.00 0.00 3.85
2504 4778 2.794981 CGAGAGTGCATATCCGTTCGTT 60.795 50.000 0.00 0.00 0.00 3.85
2505 4779 2.789893 GAGAGTGCATATCCGTTCGTTC 59.210 50.000 0.00 0.00 0.00 3.95
2506 4780 2.165641 AGAGTGCATATCCGTTCGTTCA 59.834 45.455 0.00 0.00 0.00 3.18
2507 4781 3.123804 GAGTGCATATCCGTTCGTTCAT 58.876 45.455 0.00 0.00 0.00 2.57
2508 4782 3.123804 AGTGCATATCCGTTCGTTCATC 58.876 45.455 0.00 0.00 0.00 2.92
2509 4783 3.123804 GTGCATATCCGTTCGTTCATCT 58.876 45.455 0.00 0.00 0.00 2.90
2510 4784 4.037565 AGTGCATATCCGTTCGTTCATCTA 59.962 41.667 0.00 0.00 0.00 1.98
2511 4785 4.923871 GTGCATATCCGTTCGTTCATCTAT 59.076 41.667 0.00 0.00 0.00 1.98
2512 4786 6.072119 AGTGCATATCCGTTCGTTCATCTATA 60.072 38.462 0.00 0.00 0.00 1.31
2513 4787 6.752351 GTGCATATCCGTTCGTTCATCTATAT 59.248 38.462 0.00 0.00 0.00 0.86
2514 4788 6.972901 TGCATATCCGTTCGTTCATCTATATC 59.027 38.462 0.00 0.00 0.00 1.63
2515 4789 6.972901 GCATATCCGTTCGTTCATCTATATCA 59.027 38.462 0.00 0.00 0.00 2.15
2516 4790 7.649705 GCATATCCGTTCGTTCATCTATATCAT 59.350 37.037 0.00 0.00 0.00 2.45
2517 4791 9.175060 CATATCCGTTCGTTCATCTATATCATC 57.825 37.037 0.00 0.00 0.00 2.92
2518 4792 6.569179 TCCGTTCGTTCATCTATATCATCA 57.431 37.500 0.00 0.00 0.00 3.07
2519 4793 6.977213 TCCGTTCGTTCATCTATATCATCAA 58.023 36.000 0.00 0.00 0.00 2.57
2520 4794 7.430441 TCCGTTCGTTCATCTATATCATCAAA 58.570 34.615 0.00 0.00 0.00 2.69
2521 4795 7.381408 TCCGTTCGTTCATCTATATCATCAAAC 59.619 37.037 0.00 0.00 0.00 2.93
2522 4796 7.213814 CGTTCGTTCATCTATATCATCAAACG 58.786 38.462 0.00 0.00 39.49 3.60
2523 4797 7.502339 GTTCGTTCATCTATATCATCAAACGG 58.498 38.462 0.00 0.00 38.86 4.44
2524 4798 6.745116 TCGTTCATCTATATCATCAAACGGT 58.255 36.000 0.00 0.00 38.86 4.83
2525 4799 7.878036 TCGTTCATCTATATCATCAAACGGTA 58.122 34.615 0.00 0.00 38.86 4.02
2526 4800 8.021396 TCGTTCATCTATATCATCAAACGGTAG 58.979 37.037 0.00 0.00 38.86 3.18
2527 4801 7.201359 CGTTCATCTATATCATCAAACGGTAGC 60.201 40.741 0.00 0.00 35.79 3.58
2528 4802 7.227049 TCATCTATATCATCAAACGGTAGCA 57.773 36.000 0.00 0.00 0.00 3.49
2529 4803 7.315890 TCATCTATATCATCAAACGGTAGCAG 58.684 38.462 0.00 0.00 0.00 4.24
2530 4804 6.894339 TCTATATCATCAAACGGTAGCAGA 57.106 37.500 0.00 0.00 0.00 4.26
2531 4805 6.678878 TCTATATCATCAAACGGTAGCAGAC 58.321 40.000 0.00 0.00 0.00 3.51
2532 4806 1.990799 TCATCAAACGGTAGCAGACG 58.009 50.000 0.00 0.00 0.00 4.18
2533 4807 0.999406 CATCAAACGGTAGCAGACGG 59.001 55.000 0.00 0.00 34.61 4.79
2534 4808 0.739813 ATCAAACGGTAGCAGACGGC 60.740 55.000 0.00 0.00 45.30 5.68
2535 4809 2.047560 AAACGGTAGCAGACGGCC 60.048 61.111 0.00 0.00 46.50 6.13
2536 4810 2.874664 AAACGGTAGCAGACGGCCA 61.875 57.895 2.24 0.00 46.50 5.36
2537 4811 2.781595 AAACGGTAGCAGACGGCCAG 62.782 60.000 2.24 0.00 46.50 4.85
2539 4813 4.082523 GGTAGCAGACGGCCAGCA 62.083 66.667 2.24 0.00 46.50 4.41
2540 4814 2.815647 GTAGCAGACGGCCAGCAC 60.816 66.667 2.24 0.00 46.50 4.40
2541 4815 2.997315 TAGCAGACGGCCAGCACT 60.997 61.111 2.24 0.00 46.50 4.40
2542 4816 2.583441 TAGCAGACGGCCAGCACTT 61.583 57.895 2.24 0.00 46.50 3.16
2543 4817 2.111999 TAGCAGACGGCCAGCACTTT 62.112 55.000 2.24 0.00 46.50 2.66
2544 4818 2.949106 CAGACGGCCAGCACTTTG 59.051 61.111 2.24 0.00 0.00 2.77
2545 4819 1.893808 CAGACGGCCAGCACTTTGT 60.894 57.895 2.24 0.00 0.00 2.83
2546 4820 1.598130 AGACGGCCAGCACTTTGTC 60.598 57.895 2.24 0.00 0.00 3.18
2547 4821 2.954753 GACGGCCAGCACTTTGTCG 61.955 63.158 2.24 0.00 0.00 4.35
2548 4822 2.972505 CGGCCAGCACTTTGTCGT 60.973 61.111 2.24 0.00 0.00 4.34
2549 4823 2.946762 GGCCAGCACTTTGTCGTC 59.053 61.111 0.00 0.00 0.00 4.20
2550 4824 1.598130 GGCCAGCACTTTGTCGTCT 60.598 57.895 0.00 0.00 0.00 4.18
2551 4825 1.571460 GCCAGCACTTTGTCGTCTG 59.429 57.895 0.00 0.00 0.00 3.51
2552 4826 1.571460 CCAGCACTTTGTCGTCTGC 59.429 57.895 0.00 0.00 0.00 4.26
2553 4827 1.159713 CCAGCACTTTGTCGTCTGCA 61.160 55.000 0.00 0.00 31.71 4.41
2554 4828 0.657312 CAGCACTTTGTCGTCTGCAA 59.343 50.000 0.00 0.00 31.71 4.08
2555 4829 1.063912 CAGCACTTTGTCGTCTGCAAA 59.936 47.619 0.00 0.00 35.00 3.68
2589 4863 7.167136 CGATTTAGGAACGAAATGAGTAGGTAC 59.833 40.741 0.00 0.00 43.34 3.34
2616 4896 6.692486 TCTCTCTTTGGTTATGAGTTGAGTC 58.308 40.000 0.00 0.00 31.64 3.36
2622 4902 5.717078 TGGTTATGAGTTGAGTCGTAAGT 57.283 39.130 1.67 0.00 39.48 2.24
2623 4903 6.822667 TGGTTATGAGTTGAGTCGTAAGTA 57.177 37.500 1.67 0.00 39.48 2.24
2625 4905 6.432162 TGGTTATGAGTTGAGTCGTAAGTACT 59.568 38.462 0.00 0.00 39.48 2.73
2629 4909 9.875691 TTATGAGTTGAGTCGTAAGTACTACTA 57.124 33.333 0.00 0.00 33.09 1.82
2630 4910 7.824704 TGAGTTGAGTCGTAAGTACTACTAG 57.175 40.000 0.00 0.00 33.09 2.57
2651 7131 8.388484 ACTAGTACTATATCACCGTTTACCAG 57.612 38.462 2.33 0.00 0.00 4.00
2687 7168 4.409218 TACGCGCTCACGGTGTCC 62.409 66.667 5.73 0.00 40.57 4.02
2690 7171 2.665185 GCGCTCACGGTGTCCTTT 60.665 61.111 8.17 0.00 40.57 3.11
2691 7172 1.373748 GCGCTCACGGTGTCCTTTA 60.374 57.895 8.17 0.00 40.57 1.85
2692 7173 0.739813 GCGCTCACGGTGTCCTTTAT 60.740 55.000 8.17 0.00 40.57 1.40
2693 7174 1.278238 CGCTCACGGTGTCCTTTATC 58.722 55.000 8.17 0.00 34.97 1.75
2694 7175 1.278238 GCTCACGGTGTCCTTTATCG 58.722 55.000 8.17 0.00 0.00 2.92
2695 7176 1.135199 GCTCACGGTGTCCTTTATCGA 60.135 52.381 8.17 0.00 0.00 3.59
2696 7177 2.798680 CTCACGGTGTCCTTTATCGAG 58.201 52.381 8.17 0.00 0.00 4.04
2697 7178 2.422479 CTCACGGTGTCCTTTATCGAGA 59.578 50.000 8.17 0.00 0.00 4.04
2698 7179 2.821378 TCACGGTGTCCTTTATCGAGAA 59.179 45.455 8.17 0.00 0.00 2.87
2699 7180 3.256383 TCACGGTGTCCTTTATCGAGAAA 59.744 43.478 8.17 4.96 0.00 2.52
2700 7181 3.991773 CACGGTGTCCTTTATCGAGAAAA 59.008 43.478 6.68 1.35 0.00 2.29
2701 7182 4.449743 CACGGTGTCCTTTATCGAGAAAAA 59.550 41.667 6.68 0.00 0.00 1.94
2718 7199 2.326550 AAAAACGCGCTCACGGTG 59.673 55.556 5.73 0.56 40.57 4.94
2719 7200 2.466140 AAAAACGCGCTCACGGTGT 61.466 52.632 5.73 0.00 40.57 4.16
2720 7201 2.369477 AAAAACGCGCTCACGGTGTC 62.369 55.000 5.73 0.86 40.57 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 74 4.848841 TGCTACGTAAAATTGCGAATGTTG 59.151 37.500 10.54 0.00 39.60 3.33
73 75 5.037015 TGCTACGTAAAATTGCGAATGTT 57.963 34.783 10.54 0.00 39.60 2.71
112 115 5.292101 AGAGCGTAAGAAAATACACATCAGC 59.708 40.000 0.00 0.00 43.02 4.26
133 136 2.470821 ACGTCGGAAGTCAAACAAGAG 58.529 47.619 0.00 0.00 0.00 2.85
272 279 1.308047 TTTGTGTCGCATTGAGCTGT 58.692 45.000 0.00 0.00 42.61 4.40
318 327 1.016627 CACGTCATTATGTGCCCCTG 58.983 55.000 0.00 0.00 35.90 4.45
319 328 0.618458 ACACGTCATTATGTGCCCCT 59.382 50.000 0.00 0.00 45.01 4.79
320 329 1.937899 GTACACGTCATTATGTGCCCC 59.062 52.381 0.00 0.00 45.01 5.80
333 342 1.246737 GGAACGGAGGGAGTACACGT 61.247 60.000 0.00 0.00 39.74 4.49
337 346 0.978907 TTTGGGAACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
340 349 0.328258 ACATTTGGGAACGGAGGGAG 59.672 55.000 0.00 0.00 0.00 4.30
341 350 1.659022 TACATTTGGGAACGGAGGGA 58.341 50.000 0.00 0.00 0.00 4.20
342 351 2.290705 ACTTACATTTGGGAACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
343 352 3.007635 GACTTACATTTGGGAACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
344 353 3.939066 AGACTTACATTTGGGAACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
345 354 4.360951 AAGACTTACATTTGGGAACGGA 57.639 40.909 0.00 0.00 0.00 4.69
346 355 5.447624 AAAAGACTTACATTTGGGAACGG 57.552 39.130 0.00 0.00 0.00 4.44
347 356 7.867752 TCTAAAAAGACTTACATTTGGGAACG 58.132 34.615 0.00 0.00 0.00 3.95
348 357 9.063615 TCTCTAAAAAGACTTACATTTGGGAAC 57.936 33.333 0.00 0.00 0.00 3.62
349 358 9.807921 ATCTCTAAAAAGACTTACATTTGGGAA 57.192 29.630 0.00 0.00 0.00 3.97
350 359 9.807921 AATCTCTAAAAAGACTTACATTTGGGA 57.192 29.630 0.00 0.00 0.00 4.37
381 390 9.755804 CTCATTTTGCTCTGAATGTAGTCTATA 57.244 33.333 0.00 0.00 35.35 1.31
382 391 8.263640 ACTCATTTTGCTCTGAATGTAGTCTAT 58.736 33.333 0.00 0.00 35.35 1.98
383 392 7.547019 CACTCATTTTGCTCTGAATGTAGTCTA 59.453 37.037 0.00 0.00 35.35 2.59
384 393 6.370994 CACTCATTTTGCTCTGAATGTAGTCT 59.629 38.462 0.00 0.00 35.35 3.24
385 394 6.369890 TCACTCATTTTGCTCTGAATGTAGTC 59.630 38.462 0.00 0.00 35.35 2.59
386 395 6.233434 TCACTCATTTTGCTCTGAATGTAGT 58.767 36.000 0.00 0.00 35.35 2.73
387 396 6.732531 TCACTCATTTTGCTCTGAATGTAG 57.267 37.500 0.00 0.00 35.35 2.74
388 397 7.692460 ATTCACTCATTTTGCTCTGAATGTA 57.308 32.000 0.00 0.00 35.35 2.29
389 398 6.585695 ATTCACTCATTTTGCTCTGAATGT 57.414 33.333 0.00 0.00 35.35 2.71
390 399 8.024865 TGTAATTCACTCATTTTGCTCTGAATG 58.975 33.333 0.00 0.00 35.18 2.67
391 400 8.025445 GTGTAATTCACTCATTTTGCTCTGAAT 58.975 33.333 0.00 0.00 43.13 2.57
392 401 7.362662 GTGTAATTCACTCATTTTGCTCTGAA 58.637 34.615 0.00 0.00 43.13 3.02
393 402 6.902341 GTGTAATTCACTCATTTTGCTCTGA 58.098 36.000 0.00 0.00 43.13 3.27
414 423 8.322091 GGGTGAATATAGGCATATTTAGAGTGT 58.678 37.037 0.00 0.00 37.44 3.55
415 424 8.321353 TGGGTGAATATAGGCATATTTAGAGTG 58.679 37.037 0.00 0.00 37.44 3.51
416 425 8.449423 TGGGTGAATATAGGCATATTTAGAGT 57.551 34.615 0.00 0.00 37.44 3.24
423 432 9.452517 ACTACATATGGGTGAATATAGGCATAT 57.547 33.333 7.80 0.00 0.00 1.78
424 433 8.854237 ACTACATATGGGTGAATATAGGCATA 57.146 34.615 7.80 0.00 0.00 3.14
425 434 7.755666 ACTACATATGGGTGAATATAGGCAT 57.244 36.000 7.80 0.00 0.00 4.40
426 435 7.236640 TGAACTACATATGGGTGAATATAGGCA 59.763 37.037 7.80 0.00 0.00 4.75
427 436 7.620880 TGAACTACATATGGGTGAATATAGGC 58.379 38.462 7.80 0.00 0.00 3.93
466 475 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
467 476 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
468 477 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
469 478 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
470 479 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
471 480 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
472 481 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
473 482 8.731591 AATACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
475 484 8.912614 ATAATACTCCCTCCGTTCCTAAATAT 57.087 34.615 0.00 0.00 0.00 1.28
476 485 8.731591 AATAATACTCCCTCCGTTCCTAAATA 57.268 34.615 0.00 0.00 0.00 1.40
477 486 7.628501 AATAATACTCCCTCCGTTCCTAAAT 57.371 36.000 0.00 0.00 0.00 1.40
478 487 7.441903 AAATAATACTCCCTCCGTTCCTAAA 57.558 36.000 0.00 0.00 0.00 1.85
479 488 7.441903 AAAATAATACTCCCTCCGTTCCTAA 57.558 36.000 0.00 0.00 0.00 2.69
480 489 7.126115 TGAAAAATAATACTCCCTCCGTTCCTA 59.874 37.037 0.00 0.00 0.00 2.94
481 490 5.970501 AAAATAATACTCCCTCCGTTCCT 57.029 39.130 0.00 0.00 0.00 3.36
482 491 6.117488 TGAAAAATAATACTCCCTCCGTTCC 58.883 40.000 0.00 0.00 0.00 3.62
483 492 7.619964 TTGAAAAATAATACTCCCTCCGTTC 57.380 36.000 0.00 0.00 0.00 3.95
484 493 8.589701 AATTGAAAAATAATACTCCCTCCGTT 57.410 30.769 0.00 0.00 0.00 4.44
485 494 7.284716 GGAATTGAAAAATAATACTCCCTCCGT 59.715 37.037 0.00 0.00 0.00 4.69
486 495 7.502561 AGGAATTGAAAAATAATACTCCCTCCG 59.497 37.037 0.00 0.00 0.00 4.63
487 496 8.768501 AGGAATTGAAAAATAATACTCCCTCC 57.231 34.615 0.00 0.00 0.00 4.30
488 497 9.634021 AGAGGAATTGAAAAATAATACTCCCTC 57.366 33.333 0.00 0.00 0.00 4.30
489 498 9.413734 CAGAGGAATTGAAAAATAATACTCCCT 57.586 33.333 0.00 0.00 0.00 4.20
490 499 9.190317 ACAGAGGAATTGAAAAATAATACTCCC 57.810 33.333 0.00 0.00 0.00 4.30
539 548 2.874701 CAACACAAGGAGACAAGGACAG 59.125 50.000 0.00 0.00 0.00 3.51
540 549 2.917933 CAACACAAGGAGACAAGGACA 58.082 47.619 0.00 0.00 0.00 4.02
541 550 1.604278 GCAACACAAGGAGACAAGGAC 59.396 52.381 0.00 0.00 0.00 3.85
542 551 1.476833 GGCAACACAAGGAGACAAGGA 60.477 52.381 0.00 0.00 0.00 3.36
543 552 0.954452 GGCAACACAAGGAGACAAGG 59.046 55.000 0.00 0.00 0.00 3.61
544 553 1.679139 TGGCAACACAAGGAGACAAG 58.321 50.000 0.00 0.00 46.17 3.16
545 554 3.892633 TGGCAACACAAGGAGACAA 57.107 47.368 0.00 0.00 46.17 3.18
593 602 0.244450 TATGTGGTTCCGACGGTGTC 59.756 55.000 14.79 5.54 0.00 3.67
608 617 8.970859 ATAGTTACTACTACGAACCAGTATGT 57.029 34.615 0.00 0.00 39.59 2.29
614 623 8.046708 TCTACCAATAGTTACTACTACGAACCA 58.953 37.037 0.00 0.00 39.59 3.67
626 635 8.196103 AGGACGATTCTTTCTACCAATAGTTAC 58.804 37.037 0.00 0.00 0.00 2.50
627 636 8.302515 AGGACGATTCTTTCTACCAATAGTTA 57.697 34.615 0.00 0.00 0.00 2.24
628 637 7.184067 AGGACGATTCTTTCTACCAATAGTT 57.816 36.000 0.00 0.00 0.00 2.24
630 639 6.041069 AGGAGGACGATTCTTTCTACCAATAG 59.959 42.308 0.00 0.00 0.00 1.73
631 640 5.897824 AGGAGGACGATTCTTTCTACCAATA 59.102 40.000 0.00 0.00 0.00 1.90
632 641 4.717280 AGGAGGACGATTCTTTCTACCAAT 59.283 41.667 0.00 0.00 0.00 3.16
633 642 4.094476 AGGAGGACGATTCTTTCTACCAA 58.906 43.478 0.00 0.00 0.00 3.67
643 652 7.254488 GCAAAGTAATTTCTAGGAGGACGATTC 60.254 40.741 0.00 0.00 0.00 2.52
649 658 6.672657 ACCTAGCAAAGTAATTTCTAGGAGGA 59.327 38.462 28.36 2.72 45.70 3.71
697 706 2.617250 TGATTCTTCATGTTGCGTGC 57.383 45.000 0.00 0.00 0.00 5.34
701 710 3.914364 GGTCGTTTGATTCTTCATGTTGC 59.086 43.478 0.00 0.00 0.00 4.17
1028 1069 6.961576 TGGTTTATGCTGTAGTTTTGTGTAC 58.038 36.000 0.00 0.00 0.00 2.90
1031 1072 6.676950 TGATGGTTTATGCTGTAGTTTTGTG 58.323 36.000 0.00 0.00 0.00 3.33
1035 1076 8.893727 GTCTAATGATGGTTTATGCTGTAGTTT 58.106 33.333 0.00 0.00 0.00 2.66
1070 1120 2.287788 ACTTGTCGAGCAAAGCAATTGG 60.288 45.455 7.72 0.00 39.54 3.16
1072 1122 2.358898 ACACTTGTCGAGCAAAGCAATT 59.641 40.909 0.00 0.00 36.53 2.32
1074 1124 1.378531 ACACTTGTCGAGCAAAGCAA 58.621 45.000 0.00 0.00 36.53 3.91
1075 1125 2.135139 CTACACTTGTCGAGCAAAGCA 58.865 47.619 0.00 0.00 36.53 3.91
1084 1134 2.390938 TCGTTGCTTCTACACTTGTCG 58.609 47.619 0.00 0.00 0.00 4.35
1087 1137 4.686091 TCTTCATCGTTGCTTCTACACTTG 59.314 41.667 0.00 0.00 0.00 3.16
1211 1264 8.964476 TGATATCCCTTTTAAGCTAAACTCTG 57.036 34.615 0.00 0.00 0.00 3.35
1236 1296 9.802039 TGGTCTTGTAAGGTGATTAACTAATTT 57.198 29.630 0.00 0.00 0.00 1.82
1237 1297 9.975218 ATGGTCTTGTAAGGTGATTAACTAATT 57.025 29.630 0.00 0.00 0.00 1.40
1238 1298 9.614792 GATGGTCTTGTAAGGTGATTAACTAAT 57.385 33.333 0.00 0.00 0.00 1.73
1239 1299 8.044908 GGATGGTCTTGTAAGGTGATTAACTAA 58.955 37.037 0.00 0.00 0.00 2.24
1240 1300 7.365295 GGGATGGTCTTGTAAGGTGATTAACTA 60.365 40.741 0.00 0.00 0.00 2.24
1241 1301 6.415573 GGATGGTCTTGTAAGGTGATTAACT 58.584 40.000 0.00 0.00 0.00 2.24
1242 1302 5.589050 GGGATGGTCTTGTAAGGTGATTAAC 59.411 44.000 0.00 0.00 0.00 2.01
1243 1303 5.491078 AGGGATGGTCTTGTAAGGTGATTAA 59.509 40.000 0.00 0.00 0.00 1.40
1244 1304 5.036916 AGGGATGGTCTTGTAAGGTGATTA 58.963 41.667 0.00 0.00 0.00 1.75
1245 1305 3.852578 AGGGATGGTCTTGTAAGGTGATT 59.147 43.478 0.00 0.00 0.00 2.57
1246 1306 3.464828 AGGGATGGTCTTGTAAGGTGAT 58.535 45.455 0.00 0.00 0.00 3.06
1247 1307 2.915869 AGGGATGGTCTTGTAAGGTGA 58.084 47.619 0.00 0.00 0.00 4.02
1248 1308 3.721087 AAGGGATGGTCTTGTAAGGTG 57.279 47.619 0.00 0.00 0.00 4.00
1249 1309 4.105697 TCAAAAGGGATGGTCTTGTAAGGT 59.894 41.667 0.00 0.00 0.00 3.50
1250 1310 4.459337 GTCAAAAGGGATGGTCTTGTAAGG 59.541 45.833 0.00 0.00 0.00 2.69
1251 1311 5.070001 TGTCAAAAGGGATGGTCTTGTAAG 58.930 41.667 0.00 0.00 0.00 2.34
1252 1312 5.055265 TGTCAAAAGGGATGGTCTTGTAA 57.945 39.130 0.00 0.00 0.00 2.41
1253 1313 4.715534 TGTCAAAAGGGATGGTCTTGTA 57.284 40.909 0.00 0.00 0.00 2.41
1254 1314 3.593442 TGTCAAAAGGGATGGTCTTGT 57.407 42.857 0.00 0.00 0.00 3.16
1255 1315 3.367703 GCATGTCAAAAGGGATGGTCTTG 60.368 47.826 0.00 0.00 0.00 3.02
1256 1316 2.827921 GCATGTCAAAAGGGATGGTCTT 59.172 45.455 0.00 0.00 0.00 3.01
1257 1317 2.225091 TGCATGTCAAAAGGGATGGTCT 60.225 45.455 0.00 0.00 0.00 3.85
1258 1318 2.170166 TGCATGTCAAAAGGGATGGTC 58.830 47.619 0.00 0.00 0.00 4.02
1259 1319 2.307496 TGCATGTCAAAAGGGATGGT 57.693 45.000 0.00 0.00 0.00 3.55
1260 1320 3.899052 AATGCATGTCAAAAGGGATGG 57.101 42.857 0.00 0.00 0.00 3.51
1261 1321 4.571919 ACAAATGCATGTCAAAAGGGATG 58.428 39.130 0.00 0.00 0.00 3.51
1262 1322 4.895668 ACAAATGCATGTCAAAAGGGAT 57.104 36.364 0.00 0.00 0.00 3.85
1263 1323 4.686191 AACAAATGCATGTCAAAAGGGA 57.314 36.364 0.00 0.00 31.81 4.20
1264 1324 4.690280 GGTAACAAATGCATGTCAAAAGGG 59.310 41.667 0.00 0.00 31.81 3.95
1265 1325 5.844301 GGTAACAAATGCATGTCAAAAGG 57.156 39.130 0.00 0.00 31.81 3.11
1286 1363 8.557864 TGCAATCAAACAAATTAGTTCATTTGG 58.442 29.630 10.16 0.00 45.04 3.28
1293 1383 5.304778 GGGGTGCAATCAAACAAATTAGTT 58.695 37.500 0.00 0.00 0.00 2.24
1299 1389 0.390860 CGGGGGTGCAATCAAACAAA 59.609 50.000 0.00 0.00 0.00 2.83
1301 1391 2.569354 GCGGGGGTGCAATCAAACA 61.569 57.895 0.00 0.00 34.15 2.83
1302 1392 2.261361 GCGGGGGTGCAATCAAAC 59.739 61.111 0.00 0.00 34.15 2.93
1332 1422 2.861750 GCACGGACACATGCAATCAAAA 60.862 45.455 0.00 0.00 41.65 2.44
1551 1641 2.874701 ACATCTTATGTTCCGAGCATGC 59.125 45.455 10.51 10.51 41.63 4.06
1704 1810 6.814146 ACAACAGGTTTTTCTATTCGCAAAAA 59.186 30.769 0.00 0.00 0.00 1.94
1705 1811 6.334202 ACAACAGGTTTTTCTATTCGCAAAA 58.666 32.000 0.00 0.00 0.00 2.44
1706 1812 5.897050 ACAACAGGTTTTTCTATTCGCAAA 58.103 33.333 0.00 0.00 0.00 3.68
1707 1813 5.508200 ACAACAGGTTTTTCTATTCGCAA 57.492 34.783 0.00 0.00 0.00 4.85
1708 1814 5.277825 CAACAACAGGTTTTTCTATTCGCA 58.722 37.500 0.00 0.00 37.72 5.10
1709 1815 4.148174 GCAACAACAGGTTTTTCTATTCGC 59.852 41.667 0.00 0.00 37.72 4.70
1710 1816 5.519722 AGCAACAACAGGTTTTTCTATTCG 58.480 37.500 0.00 0.00 37.72 3.34
1711 1817 5.920840 GGAGCAACAACAGGTTTTTCTATTC 59.079 40.000 0.00 0.00 37.72 1.75
1712 1818 5.507315 CGGAGCAACAACAGGTTTTTCTATT 60.507 40.000 0.00 0.00 37.72 1.73
1713 1819 4.023193 CGGAGCAACAACAGGTTTTTCTAT 60.023 41.667 0.00 0.00 37.72 1.98
1714 1820 3.314080 CGGAGCAACAACAGGTTTTTCTA 59.686 43.478 0.00 0.00 37.72 2.10
1756 1877 5.045012 TGATTGAGCAGAGAGGCATAAAT 57.955 39.130 0.00 0.00 35.83 1.40
1834 3570 5.301805 CCATTGGAACTGGACAGTACTTTTT 59.698 40.000 5.25 0.00 41.58 1.94
1838 3574 2.979678 ACCATTGGAACTGGACAGTACT 59.020 45.455 10.37 0.00 41.58 2.73
1861 3597 4.920640 TGAACACCGAGAAGGATCTATC 57.079 45.455 0.00 0.00 45.00 2.08
1864 3600 2.354203 GCTTGAACACCGAGAAGGATCT 60.354 50.000 0.00 0.00 45.00 2.75
1951 3687 5.441500 TGCGTAAATTAATGATCCCCTTGA 58.558 37.500 0.00 0.00 0.00 3.02
2007 4065 4.882427 CGGAGAGAGTAGTCAGTAATGGAA 59.118 45.833 0.00 0.00 0.00 3.53
2019 4077 9.287373 ACTTATATTTAGGAACGGAGAGAGTAG 57.713 37.037 0.00 0.00 0.00 2.57
2022 4080 8.398878 AGACTTATATTTAGGAACGGAGAGAG 57.601 38.462 0.00 0.00 0.00 3.20
2023 4081 8.763984 AAGACTTATATTTAGGAACGGAGAGA 57.236 34.615 0.00 0.00 0.00 3.10
2024 4082 9.250624 CAAAGACTTATATTTAGGAACGGAGAG 57.749 37.037 0.00 0.00 0.00 3.20
2025 4083 8.755977 ACAAAGACTTATATTTAGGAACGGAGA 58.244 33.333 0.00 0.00 0.00 3.71
2026 4084 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
2043 4101 9.712359 GTTCGTAGTGAAATTTTTACAAAGACT 57.288 29.630 6.79 0.00 38.60 3.24
2044 4102 8.950961 GGTTCGTAGTGAAATTTTTACAAAGAC 58.049 33.333 6.79 0.00 38.60 3.01
2045 4103 8.675504 TGGTTCGTAGTGAAATTTTTACAAAGA 58.324 29.630 6.79 0.67 38.60 2.52
2046 4104 8.739461 GTGGTTCGTAGTGAAATTTTTACAAAG 58.261 33.333 6.79 0.00 38.60 2.77
2047 4105 8.242053 TGTGGTTCGTAGTGAAATTTTTACAAA 58.758 29.630 6.79 0.00 38.60 2.83
2048 4106 7.759465 TGTGGTTCGTAGTGAAATTTTTACAA 58.241 30.769 6.79 0.00 38.60 2.41
2049 4107 7.317842 TGTGGTTCGTAGTGAAATTTTTACA 57.682 32.000 6.79 0.00 38.60 2.41
2050 4108 9.321590 GTATGTGGTTCGTAGTGAAATTTTTAC 57.678 33.333 0.00 0.00 38.60 2.01
2051 4109 8.222433 CGTATGTGGTTCGTAGTGAAATTTTTA 58.778 33.333 0.00 0.00 38.60 1.52
2052 4110 7.073265 CGTATGTGGTTCGTAGTGAAATTTTT 58.927 34.615 0.00 0.00 38.60 1.94
2053 4111 6.347888 CCGTATGTGGTTCGTAGTGAAATTTT 60.348 38.462 0.00 0.00 38.60 1.82
2054 4112 5.121142 CCGTATGTGGTTCGTAGTGAAATTT 59.879 40.000 0.00 0.00 38.60 1.82
2055 4113 4.628333 CCGTATGTGGTTCGTAGTGAAATT 59.372 41.667 0.00 0.00 38.60 1.82
2056 4114 4.082081 TCCGTATGTGGTTCGTAGTGAAAT 60.082 41.667 0.00 0.00 38.60 2.17
2057 4115 3.255395 TCCGTATGTGGTTCGTAGTGAAA 59.745 43.478 0.00 0.00 38.60 2.69
2058 4116 2.819019 TCCGTATGTGGTTCGTAGTGAA 59.181 45.455 0.00 0.00 0.00 3.18
2059 4117 2.435422 TCCGTATGTGGTTCGTAGTGA 58.565 47.619 0.00 0.00 0.00 3.41
2060 4118 2.925578 TCCGTATGTGGTTCGTAGTG 57.074 50.000 0.00 0.00 0.00 2.74
2061 4119 2.756760 ACATCCGTATGTGGTTCGTAGT 59.243 45.455 0.00 0.00 44.79 2.73
2062 4120 3.431922 ACATCCGTATGTGGTTCGTAG 57.568 47.619 0.00 0.00 44.79 3.51
2063 4121 4.862350 CATACATCCGTATGTGGTTCGTA 58.138 43.478 3.56 0.00 46.70 3.43
2064 4122 3.713288 CATACATCCGTATGTGGTTCGT 58.287 45.455 3.56 0.00 46.70 3.85
2073 4131 9.371136 CTAAAATGCATCTACATACATCCGTAT 57.629 33.333 0.00 0.00 38.96 3.06
2074 4132 8.581578 TCTAAAATGCATCTACATACATCCGTA 58.418 33.333 0.00 0.00 0.00 4.02
2075 4133 7.441836 TCTAAAATGCATCTACATACATCCGT 58.558 34.615 0.00 0.00 0.00 4.69
2076 4134 7.889589 TCTAAAATGCATCTACATACATCCG 57.110 36.000 0.00 0.00 0.00 4.18
2087 4145 9.624373 AGTGAATCTGTAATCTAAAATGCATCT 57.376 29.630 0.00 0.00 0.00 2.90
2088 4146 9.875675 GAGTGAATCTGTAATCTAAAATGCATC 57.124 33.333 0.00 0.00 0.00 3.91
2089 4147 9.399797 TGAGTGAATCTGTAATCTAAAATGCAT 57.600 29.630 0.00 0.00 0.00 3.96
2090 4148 8.791327 TGAGTGAATCTGTAATCTAAAATGCA 57.209 30.769 0.00 0.00 0.00 3.96
2096 4154 9.453572 AGCAAAATGAGTGAATCTGTAATCTAA 57.546 29.630 0.00 0.00 0.00 2.10
2097 4155 9.102757 GAGCAAAATGAGTGAATCTGTAATCTA 57.897 33.333 0.00 0.00 0.00 1.98
2098 4156 7.066766 GGAGCAAAATGAGTGAATCTGTAATCT 59.933 37.037 0.00 0.00 0.00 2.40
2099 4157 7.192232 GGAGCAAAATGAGTGAATCTGTAATC 58.808 38.462 0.00 0.00 0.00 1.75
2100 4158 6.183360 CGGAGCAAAATGAGTGAATCTGTAAT 60.183 38.462 0.00 0.00 0.00 1.89
2101 4159 5.122239 CGGAGCAAAATGAGTGAATCTGTAA 59.878 40.000 0.00 0.00 0.00 2.41
2102 4160 4.631377 CGGAGCAAAATGAGTGAATCTGTA 59.369 41.667 0.00 0.00 0.00 2.74
2103 4161 3.438087 CGGAGCAAAATGAGTGAATCTGT 59.562 43.478 0.00 0.00 0.00 3.41
2104 4162 3.438087 ACGGAGCAAAATGAGTGAATCTG 59.562 43.478 0.00 0.00 0.00 2.90
2105 4163 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2106 4164 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2107 4165 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2108 4166 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2109 4167 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2110 4168 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2111 4169 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2112 4170 5.580691 TGAACTACATACGGAGCAAAATGAG 59.419 40.000 0.00 0.00 0.00 2.90
2113 4171 5.483811 TGAACTACATACGGAGCAAAATGA 58.516 37.500 0.00 0.00 0.00 2.57
2114 4172 5.794687 TGAACTACATACGGAGCAAAATG 57.205 39.130 0.00 0.00 0.00 2.32
2115 4173 7.272978 ACTATGAACTACATACGGAGCAAAAT 58.727 34.615 0.00 0.00 40.07 1.82
2116 4174 6.636705 ACTATGAACTACATACGGAGCAAAA 58.363 36.000 0.00 0.00 40.07 2.44
2117 4175 6.216801 ACTATGAACTACATACGGAGCAAA 57.783 37.500 0.00 0.00 40.07 3.68
2118 4176 5.847111 ACTATGAACTACATACGGAGCAA 57.153 39.130 0.00 0.00 40.07 3.91
2119 4177 6.293698 TCTACTATGAACTACATACGGAGCA 58.706 40.000 0.00 0.00 40.07 4.26
2120 4178 6.798315 TCTACTATGAACTACATACGGAGC 57.202 41.667 0.00 0.00 40.07 4.70
2121 4179 9.221933 AGATTCTACTATGAACTACATACGGAG 57.778 37.037 0.00 0.00 40.07 4.63
2122 4180 9.217278 GAGATTCTACTATGAACTACATACGGA 57.783 37.037 0.00 0.00 40.07 4.69
2123 4181 9.221933 AGAGATTCTACTATGAACTACATACGG 57.778 37.037 0.00 0.00 40.07 4.02
2161 4219 9.768662 ACAAACTACTCCTTTCGTTTCTAAATA 57.231 29.630 0.00 0.00 0.00 1.40
2162 4220 8.672823 ACAAACTACTCCTTTCGTTTCTAAAT 57.327 30.769 0.00 0.00 0.00 1.40
2163 4221 8.496707 AACAAACTACTCCTTTCGTTTCTAAA 57.503 30.769 0.00 0.00 0.00 1.85
2164 4222 8.496707 AAACAAACTACTCCTTTCGTTTCTAA 57.503 30.769 0.00 0.00 0.00 2.10
2165 4223 8.496707 AAAACAAACTACTCCTTTCGTTTCTA 57.503 30.769 0.00 0.00 0.00 2.10
2166 4224 6.997239 AAACAAACTACTCCTTTCGTTTCT 57.003 33.333 0.00 0.00 0.00 2.52
2167 4225 7.375280 GCTAAAACAAACTACTCCTTTCGTTTC 59.625 37.037 0.00 0.00 0.00 2.78
2168 4226 7.191551 GCTAAAACAAACTACTCCTTTCGTTT 58.808 34.615 0.00 0.00 0.00 3.60
2169 4227 6.238566 GGCTAAAACAAACTACTCCTTTCGTT 60.239 38.462 0.00 0.00 0.00 3.85
2170 4228 5.237996 GGCTAAAACAAACTACTCCTTTCGT 59.762 40.000 0.00 0.00 0.00 3.85
2171 4229 5.237779 TGGCTAAAACAAACTACTCCTTTCG 59.762 40.000 0.00 0.00 0.00 3.46
2172 4230 6.628919 TGGCTAAAACAAACTACTCCTTTC 57.371 37.500 0.00 0.00 0.00 2.62
2173 4231 6.183360 GGTTGGCTAAAACAAACTACTCCTTT 60.183 38.462 0.00 0.00 32.89 3.11
2174 4232 5.301045 GGTTGGCTAAAACAAACTACTCCTT 59.699 40.000 0.00 0.00 32.89 3.36
2175 4233 4.825634 GGTTGGCTAAAACAAACTACTCCT 59.174 41.667 0.00 0.00 32.89 3.69
2176 4234 4.581409 TGGTTGGCTAAAACAAACTACTCC 59.419 41.667 0.00 0.00 36.51 3.85
2177 4235 5.761165 TGGTTGGCTAAAACAAACTACTC 57.239 39.130 0.00 0.00 36.51 2.59
2185 4243 4.155826 CGAGATGATTGGTTGGCTAAAACA 59.844 41.667 0.00 0.00 32.06 2.83
2186 4244 4.156008 ACGAGATGATTGGTTGGCTAAAAC 59.844 41.667 0.00 0.00 0.00 2.43
2187 4245 4.155826 CACGAGATGATTGGTTGGCTAAAA 59.844 41.667 0.00 0.00 0.00 1.52
2188 4246 3.689161 CACGAGATGATTGGTTGGCTAAA 59.311 43.478 0.00 0.00 0.00 1.85
2196 4254 4.707105 TGCATATTCACGAGATGATTGGT 58.293 39.130 0.00 0.00 37.11 3.67
2259 4490 1.333347 CCGACAAGCTAGACGAGATCG 60.333 57.143 0.00 0.00 46.33 3.69
2302 4560 8.136165 TCTCTGCGAAGACTTATATTTAGGAAC 58.864 37.037 0.00 0.00 0.00 3.62
2322 4583 1.201343 GTCCGTAGCGAAATCTCTGC 58.799 55.000 0.00 0.00 0.00 4.26
2323 4584 1.134367 TGGTCCGTAGCGAAATCTCTG 59.866 52.381 0.00 0.00 0.00 3.35
2333 4594 4.785511 ATATCTGTATGTGGTCCGTAGC 57.214 45.455 0.00 0.00 0.00 3.58
2337 4598 7.142021 GCATCTATATATCTGTATGTGGTCCG 58.858 42.308 0.00 0.00 0.00 4.79
2431 4705 8.866093 TGTGTATAGCAGCACTATTCCTAAATA 58.134 33.333 4.79 0.00 41.91 1.40
2432 4706 7.657761 GTGTGTATAGCAGCACTATTCCTAAAT 59.342 37.037 4.79 0.00 41.91 1.40
2433 4707 6.984474 GTGTGTATAGCAGCACTATTCCTAAA 59.016 38.462 4.79 0.00 41.91 1.85
2434 4708 6.513180 GTGTGTATAGCAGCACTATTCCTAA 58.487 40.000 4.79 0.00 41.91 2.69
2435 4709 5.278315 CGTGTGTATAGCAGCACTATTCCTA 60.278 44.000 4.79 0.00 41.91 2.94
2436 4710 4.499865 CGTGTGTATAGCAGCACTATTCCT 60.500 45.833 4.79 0.00 41.91 3.36
2437 4711 3.736252 CGTGTGTATAGCAGCACTATTCC 59.264 47.826 4.79 0.00 41.91 3.01
2438 4712 4.607955 TCGTGTGTATAGCAGCACTATTC 58.392 43.478 4.79 1.53 41.91 1.75
2439 4713 4.649088 TCGTGTGTATAGCAGCACTATT 57.351 40.909 4.79 0.00 41.91 1.73
2440 4714 4.550422 CATCGTGTGTATAGCAGCACTAT 58.450 43.478 0.00 4.86 44.12 2.12
2441 4715 3.243401 CCATCGTGTGTATAGCAGCACTA 60.243 47.826 0.00 0.00 36.63 2.74
2442 4716 2.481969 CCATCGTGTGTATAGCAGCACT 60.482 50.000 0.00 0.00 36.63 4.40
2443 4717 1.860950 CCATCGTGTGTATAGCAGCAC 59.139 52.381 0.00 0.00 36.26 4.40
2444 4718 1.480545 ACCATCGTGTGTATAGCAGCA 59.519 47.619 0.00 0.00 0.00 4.41
2445 4719 2.225068 ACCATCGTGTGTATAGCAGC 57.775 50.000 0.00 0.00 0.00 5.25
2446 4720 4.629634 TGAAAACCATCGTGTGTATAGCAG 59.370 41.667 0.00 0.00 0.00 4.24
2447 4721 4.570930 TGAAAACCATCGTGTGTATAGCA 58.429 39.130 0.00 0.00 0.00 3.49
2448 4722 5.539582 TTGAAAACCATCGTGTGTATAGC 57.460 39.130 0.00 0.00 0.00 2.97
2449 4723 6.013085 CGTTTGAAAACCATCGTGTGTATAG 58.987 40.000 0.49 0.00 35.51 1.31
2450 4724 5.695363 TCGTTTGAAAACCATCGTGTGTATA 59.305 36.000 0.49 0.00 35.51 1.47
2451 4725 4.512198 TCGTTTGAAAACCATCGTGTGTAT 59.488 37.500 0.49 0.00 35.51 2.29
2452 4726 3.869832 TCGTTTGAAAACCATCGTGTGTA 59.130 39.130 0.49 0.00 35.51 2.90
2453 4727 2.678836 TCGTTTGAAAACCATCGTGTGT 59.321 40.909 0.49 0.00 35.51 3.72
2454 4728 3.326733 TCGTTTGAAAACCATCGTGTG 57.673 42.857 0.49 0.00 35.51 3.82
2455 4729 4.561735 AATCGTTTGAAAACCATCGTGT 57.438 36.364 0.49 0.00 35.51 4.49
2456 4730 6.452350 GCATAAATCGTTTGAAAACCATCGTG 60.452 38.462 0.49 0.00 35.51 4.35
2457 4731 5.571357 GCATAAATCGTTTGAAAACCATCGT 59.429 36.000 0.49 0.00 35.51 3.73
2458 4732 5.570973 TGCATAAATCGTTTGAAAACCATCG 59.429 36.000 0.49 0.00 35.51 3.84
2459 4733 6.452350 CGTGCATAAATCGTTTGAAAACCATC 60.452 38.462 0.00 0.00 35.51 3.51
2460 4734 5.344665 CGTGCATAAATCGTTTGAAAACCAT 59.655 36.000 0.00 0.00 35.51 3.55
2461 4735 4.677378 CGTGCATAAATCGTTTGAAAACCA 59.323 37.500 0.00 0.00 35.51 3.67
2462 4736 4.912766 TCGTGCATAAATCGTTTGAAAACC 59.087 37.500 0.00 0.00 35.51 3.27
2463 4737 5.849081 TCTCGTGCATAAATCGTTTGAAAAC 59.151 36.000 0.00 0.00 35.59 2.43
2464 4738 5.991568 TCTCGTGCATAAATCGTTTGAAAA 58.008 33.333 0.00 0.00 0.00 2.29
2465 4739 5.178623 ACTCTCGTGCATAAATCGTTTGAAA 59.821 36.000 0.00 0.00 0.00 2.69
2466 4740 4.688879 ACTCTCGTGCATAAATCGTTTGAA 59.311 37.500 0.00 0.00 0.00 2.69
2467 4741 4.091365 CACTCTCGTGCATAAATCGTTTGA 59.909 41.667 0.00 0.00 33.82 2.69
2468 4742 4.326205 CACTCTCGTGCATAAATCGTTTG 58.674 43.478 0.00 0.00 33.82 2.93
2469 4743 4.584029 CACTCTCGTGCATAAATCGTTT 57.416 40.909 0.00 0.00 33.82 3.60
2481 4755 2.120232 GAACGGATATGCACTCTCGTG 58.880 52.381 12.22 0.00 44.07 4.35
2482 4756 1.268589 CGAACGGATATGCACTCTCGT 60.269 52.381 0.00 0.00 0.00 4.18
2483 4757 1.268589 ACGAACGGATATGCACTCTCG 60.269 52.381 0.00 0.00 0.00 4.04
2484 4758 2.493713 ACGAACGGATATGCACTCTC 57.506 50.000 0.00 0.00 0.00 3.20
2485 4759 2.165641 TGAACGAACGGATATGCACTCT 59.834 45.455 0.00 0.00 0.00 3.24
2486 4760 2.536365 TGAACGAACGGATATGCACTC 58.464 47.619 0.00 0.00 0.00 3.51
2487 4761 2.665649 TGAACGAACGGATATGCACT 57.334 45.000 0.00 0.00 0.00 4.40
2488 4762 3.123804 AGATGAACGAACGGATATGCAC 58.876 45.455 0.00 0.00 0.00 4.57
2489 4763 3.452755 AGATGAACGAACGGATATGCA 57.547 42.857 0.00 0.00 0.00 3.96
2490 4764 6.972901 TGATATAGATGAACGAACGGATATGC 59.027 38.462 0.00 0.00 0.00 3.14
2491 4765 9.175060 GATGATATAGATGAACGAACGGATATG 57.825 37.037 0.00 0.00 0.00 1.78
2492 4766 8.903820 TGATGATATAGATGAACGAACGGATAT 58.096 33.333 0.00 0.00 0.00 1.63
2493 4767 8.276252 TGATGATATAGATGAACGAACGGATA 57.724 34.615 0.00 0.00 0.00 2.59
2494 4768 7.158099 TGATGATATAGATGAACGAACGGAT 57.842 36.000 0.00 0.00 0.00 4.18
2495 4769 6.569179 TGATGATATAGATGAACGAACGGA 57.431 37.500 0.00 0.00 0.00 4.69
2496 4770 7.502339 GTTTGATGATATAGATGAACGAACGG 58.498 38.462 0.00 0.00 0.00 4.44
2497 4771 7.213814 CGTTTGATGATATAGATGAACGAACG 58.786 38.462 5.49 5.49 40.50 3.95
2498 4772 7.169308 ACCGTTTGATGATATAGATGAACGAAC 59.831 37.037 12.10 0.00 40.50 3.95
2499 4773 7.207383 ACCGTTTGATGATATAGATGAACGAA 58.793 34.615 12.10 0.00 40.50 3.85
2500 4774 6.745116 ACCGTTTGATGATATAGATGAACGA 58.255 36.000 12.10 0.00 40.50 3.85
2501 4775 7.201359 GCTACCGTTTGATGATATAGATGAACG 60.201 40.741 0.00 0.00 38.54 3.95
2502 4776 7.598869 TGCTACCGTTTGATGATATAGATGAAC 59.401 37.037 0.00 0.00 0.00 3.18
2503 4777 7.666623 TGCTACCGTTTGATGATATAGATGAA 58.333 34.615 0.00 0.00 0.00 2.57
2504 4778 7.176690 TCTGCTACCGTTTGATGATATAGATGA 59.823 37.037 0.00 0.00 0.00 2.92
2505 4779 7.274468 GTCTGCTACCGTTTGATGATATAGATG 59.726 40.741 0.00 0.00 0.00 2.90
2506 4780 7.316640 GTCTGCTACCGTTTGATGATATAGAT 58.683 38.462 0.00 0.00 0.00 1.98
2507 4781 6.567891 CGTCTGCTACCGTTTGATGATATAGA 60.568 42.308 0.00 0.00 0.00 1.98
2508 4782 5.569441 CGTCTGCTACCGTTTGATGATATAG 59.431 44.000 0.00 0.00 0.00 1.31
2509 4783 5.458015 CGTCTGCTACCGTTTGATGATATA 58.542 41.667 0.00 0.00 0.00 0.86
2510 4784 4.299155 CGTCTGCTACCGTTTGATGATAT 58.701 43.478 0.00 0.00 0.00 1.63
2511 4785 3.490249 CCGTCTGCTACCGTTTGATGATA 60.490 47.826 0.00 0.00 0.00 2.15
2512 4786 2.540515 CGTCTGCTACCGTTTGATGAT 58.459 47.619 0.00 0.00 0.00 2.45
2513 4787 1.403647 CCGTCTGCTACCGTTTGATGA 60.404 52.381 0.00 0.00 0.00 2.92
2514 4788 0.999406 CCGTCTGCTACCGTTTGATG 59.001 55.000 0.00 0.00 0.00 3.07
2515 4789 0.739813 GCCGTCTGCTACCGTTTGAT 60.740 55.000 0.00 0.00 36.87 2.57
2516 4790 1.373748 GCCGTCTGCTACCGTTTGA 60.374 57.895 0.00 0.00 36.87 2.69
2517 4791 2.388232 GGCCGTCTGCTACCGTTTG 61.388 63.158 0.00 0.00 40.92 2.93
2518 4792 2.047560 GGCCGTCTGCTACCGTTT 60.048 61.111 0.00 0.00 40.92 3.60
2519 4793 3.296709 CTGGCCGTCTGCTACCGTT 62.297 63.158 0.00 0.00 40.92 4.44
2520 4794 3.760035 CTGGCCGTCTGCTACCGT 61.760 66.667 0.00 0.00 40.92 4.83
2522 4796 4.082523 TGCTGGCCGTCTGCTACC 62.083 66.667 0.00 0.00 40.43 3.18
2523 4797 2.788191 AAGTGCTGGCCGTCTGCTAC 62.788 60.000 0.00 1.94 40.43 3.58
2524 4798 2.111999 AAAGTGCTGGCCGTCTGCTA 62.112 55.000 0.00 0.00 40.43 3.49
2525 4799 3.482232 AAAGTGCTGGCCGTCTGCT 62.482 57.895 0.00 0.00 40.43 4.24
2526 4800 2.980233 AAAGTGCTGGCCGTCTGC 60.980 61.111 0.00 0.00 40.23 4.26
2527 4801 1.845809 GACAAAGTGCTGGCCGTCTG 61.846 60.000 0.00 0.00 0.00 3.51
2528 4802 1.598130 GACAAAGTGCTGGCCGTCT 60.598 57.895 0.00 0.00 0.00 4.18
2529 4803 2.946762 GACAAAGTGCTGGCCGTC 59.053 61.111 0.00 0.00 0.00 4.79
2530 4804 2.972505 CGACAAAGTGCTGGCCGT 60.973 61.111 0.00 0.00 0.00 5.68
2531 4805 2.954753 GACGACAAAGTGCTGGCCG 61.955 63.158 0.00 0.00 0.00 6.13
2532 4806 1.598130 AGACGACAAAGTGCTGGCC 60.598 57.895 0.00 0.00 0.00 5.36
2533 4807 1.571460 CAGACGACAAAGTGCTGGC 59.429 57.895 0.00 0.00 0.00 4.85
2534 4808 1.159713 TGCAGACGACAAAGTGCTGG 61.160 55.000 0.00 0.00 36.84 4.85
2535 4809 0.657312 TTGCAGACGACAAAGTGCTG 59.343 50.000 0.00 0.00 36.84 4.41
2536 4810 1.331756 CTTTGCAGACGACAAAGTGCT 59.668 47.619 12.49 0.00 45.72 4.40
2537 4811 1.746760 CTTTGCAGACGACAAAGTGC 58.253 50.000 12.49 4.10 45.72 4.40
2550 4824 3.818210 TCCTAAATCGAAACTGCTTTGCA 59.182 39.130 0.00 0.00 36.92 4.08
2551 4825 4.419522 TCCTAAATCGAAACTGCTTTGC 57.580 40.909 0.00 0.00 0.00 3.68
2552 4826 4.846137 CGTTCCTAAATCGAAACTGCTTTG 59.154 41.667 0.00 0.00 0.00 2.77
2553 4827 4.753107 TCGTTCCTAAATCGAAACTGCTTT 59.247 37.500 0.00 0.00 0.00 3.51
2554 4828 4.312443 TCGTTCCTAAATCGAAACTGCTT 58.688 39.130 0.00 0.00 0.00 3.91
2555 4829 3.921677 TCGTTCCTAAATCGAAACTGCT 58.078 40.909 0.00 0.00 0.00 4.24
2556 4830 4.657075 TTCGTTCCTAAATCGAAACTGC 57.343 40.909 0.00 0.00 39.90 4.40
2561 4835 6.755141 CCTACTCATTTCGTTCCTAAATCGAA 59.245 38.462 0.00 0.00 40.84 3.71
2562 4836 6.127535 ACCTACTCATTTCGTTCCTAAATCGA 60.128 38.462 0.00 0.00 0.00 3.59
2563 4837 6.040878 ACCTACTCATTTCGTTCCTAAATCG 58.959 40.000 0.00 0.00 0.00 3.34
2564 4838 7.167136 CGTACCTACTCATTTCGTTCCTAAATC 59.833 40.741 0.00 0.00 0.00 2.17
2579 4853 4.882427 CCAAAGAGAGATCGTACCTACTCA 59.118 45.833 0.00 0.00 32.59 3.41
2589 4863 6.333416 TCAACTCATAACCAAAGAGAGATCG 58.667 40.000 0.00 0.00 33.69 3.69
2623 4903 9.495572 GGTAAACGGTGATATAGTACTAGTAGT 57.504 37.037 14.57 14.57 0.00 2.73
2625 4905 9.494271 CTGGTAAACGGTGATATAGTACTAGTA 57.506 37.037 8.85 0.00 0.00 1.82
2629 4909 5.537674 CCCTGGTAAACGGTGATATAGTACT 59.462 44.000 0.00 0.00 0.00 2.73
2630 4910 5.776744 CCCTGGTAAACGGTGATATAGTAC 58.223 45.833 0.00 0.00 0.00 2.73
2651 7131 1.826385 AGCTCAGTGTTTACATGCCC 58.174 50.000 0.00 0.00 0.00 5.36
2701 7182 2.326550 CACCGTGAGCGCGTTTTT 59.673 55.556 8.43 0.00 36.67 1.94
2702 7183 2.877974 GACACCGTGAGCGCGTTTT 61.878 57.895 8.43 0.00 36.67 2.43
2703 7184 3.335534 GACACCGTGAGCGCGTTT 61.336 61.111 8.43 0.00 36.67 3.60
2709 7190 4.760047 ATGGCCGACACCGTGAGC 62.760 66.667 5.28 5.06 0.00 4.26
2716 7197 3.136123 ATGCTGCATGGCCGACAC 61.136 61.111 15.44 0.00 0.00 3.67
2717 7198 3.135457 CATGCTGCATGGCCGACA 61.135 61.111 30.12 0.00 38.11 4.35
2718 7199 4.564116 GCATGCTGCATGGCCGAC 62.564 66.667 35.63 19.74 44.26 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.