Multiple sequence alignment - TraesCS1D01G265600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G265600 chr1D 100.000 2551 0 0 1 2551 361212362 361214912 0.000000e+00 4711.0
1 TraesCS1D01G265600 chr1D 81.804 1242 168 36 603 1825 361487473 361488675 0.000000e+00 989.0
2 TraesCS1D01G265600 chr1D 82.076 1127 156 32 951 2049 361205085 361206193 0.000000e+00 920.0
3 TraesCS1D01G265600 chr1D 82.843 204 26 7 748 946 361204580 361204779 9.380000e-40 174.0
4 TraesCS1D01G265600 chr1A 88.457 1646 143 31 442 2064 460966764 460968385 0.000000e+00 1943.0
5 TraesCS1D01G265600 chr1A 82.638 1054 150 20 618 1653 461047334 461048372 0.000000e+00 902.0
6 TraesCS1D01G265600 chr1A 96.614 443 15 0 1 443 450562785 450563227 0.000000e+00 736.0
7 TraesCS1D01G265600 chr1A 84.071 226 23 1 2256 2468 460968711 460968936 3.330000e-49 206.0
8 TraesCS1D01G265600 chr1B 96.243 559 17 3 442 997 483903000 483903557 0.000000e+00 913.0
9 TraesCS1D01G265600 chr1B 82.816 1030 144 21 618 1629 484217114 484218128 0.000000e+00 891.0
10 TraesCS1D01G265600 chr1B 82.347 1031 137 27 618 1629 484150127 484151131 0.000000e+00 854.0
11 TraesCS1D01G265600 chr1B 80.607 1088 164 30 951 2003 483866257 483867332 0.000000e+00 797.0
12 TraesCS1D01G265600 chr1B 94.071 506 21 3 1322 1826 483904748 483905245 0.000000e+00 760.0
13 TraesCS1D01G265600 chr1B 78.899 1199 178 59 883 2037 484146804 484147971 0.000000e+00 743.0
14 TraesCS1D01G265600 chr1B 78.899 1199 178 59 883 2037 484213791 484214958 0.000000e+00 743.0
15 TraesCS1D01G265600 chr1B 89.243 251 10 3 1828 2065 483905409 483905655 5.340000e-77 298.0
16 TraesCS1D01G265600 chr1B 96.175 183 6 1 2370 2551 483989836 483990018 5.340000e-77 298.0
17 TraesCS1D01G265600 chr7D 97.059 442 12 1 1 442 194493670 194494110 0.000000e+00 743.0
18 TraesCS1D01G265600 chr5A 94.545 440 24 0 1 440 476442032 476442471 0.000000e+00 680.0
19 TraesCS1D01G265600 chr5A 95.385 130 6 0 2057 2186 307440805 307440934 9.250000e-50 207.0
20 TraesCS1D01G265600 chr5A 95.385 130 5 1 2060 2188 86548462 86548591 3.330000e-49 206.0
21 TraesCS1D01G265600 chr5A 91.667 84 4 3 2469 2551 17009072 17008991 2.070000e-21 113.0
22 TraesCS1D01G265600 chr4A 94.318 440 21 2 1 440 18844546 18844111 0.000000e+00 671.0
23 TraesCS1D01G265600 chr4A 92.143 140 10 1 2062 2200 111567169 111567308 2.000000e-46 196.0
24 TraesCS1D01G265600 chr4D 93.213 442 29 1 1 441 374776774 374776333 0.000000e+00 649.0
25 TraesCS1D01G265600 chr5B 93.182 440 28 2 1 439 348574145 348574583 0.000000e+00 645.0
26 TraesCS1D01G265600 chr5B 90.909 77 5 2 2469 2544 42199580 42199655 4.490000e-18 102.0
27 TraesCS1D01G265600 chr2A 93.166 439 28 2 1 438 636097929 636098366 0.000000e+00 643.0
28 TraesCS1D01G265600 chr2A 96.875 128 4 0 2064 2191 733544801 733544674 5.530000e-52 215.0
29 TraesCS1D01G265600 chr2A 93.939 132 6 2 2065 2196 653424230 653424101 5.570000e-47 198.0
30 TraesCS1D01G265600 chr2A 86.420 81 7 4 2470 2549 672596977 672597054 4.520000e-13 86.1
31 TraesCS1D01G265600 chr4B 92.777 443 30 2 1 442 413858381 413858822 7.700000e-180 640.0
32 TraesCS1D01G265600 chr6B 92.551 443 29 4 1 441 459271427 459271867 1.290000e-177 632.0
33 TraesCS1D01G265600 chr2B 96.850 127 4 0 2060 2186 58667236 58667110 1.990000e-51 213.0
34 TraesCS1D01G265600 chr2D 96.124 129 5 0 2065 2193 421796861 421796989 7.150000e-51 211.0
35 TraesCS1D01G265600 chr3A 96.063 127 5 0 2060 2186 148651819 148651945 9.250000e-50 207.0
36 TraesCS1D01G265600 chr3A 91.667 72 5 1 2480 2551 704466962 704467032 5.810000e-17 99.0
37 TraesCS1D01G265600 chr6A 94.656 131 6 1 2057 2186 570756606 570756476 4.300000e-48 202.0
38 TraesCS1D01G265600 chr6D 91.935 62 4 1 2468 2528 36888026 36888087 4.520000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G265600 chr1D 361212362 361214912 2550 False 4711.0 4711 100.000000 1 2551 1 chr1D.!!$F1 2550
1 TraesCS1D01G265600 chr1D 361487473 361488675 1202 False 989.0 989 81.804000 603 1825 1 chr1D.!!$F2 1222
2 TraesCS1D01G265600 chr1D 361204580 361206193 1613 False 547.0 920 82.459500 748 2049 2 chr1D.!!$F3 1301
3 TraesCS1D01G265600 chr1A 460966764 460968936 2172 False 1074.5 1943 86.264000 442 2468 2 chr1A.!!$F3 2026
4 TraesCS1D01G265600 chr1A 461047334 461048372 1038 False 902.0 902 82.638000 618 1653 1 chr1A.!!$F2 1035
5 TraesCS1D01G265600 chr1B 484213791 484218128 4337 False 817.0 891 80.857500 618 2037 2 chr1B.!!$F5 1419
6 TraesCS1D01G265600 chr1B 484146804 484151131 4327 False 798.5 854 80.623000 618 2037 2 chr1B.!!$F4 1419
7 TraesCS1D01G265600 chr1B 483866257 483867332 1075 False 797.0 797 80.607000 951 2003 1 chr1B.!!$F1 1052
8 TraesCS1D01G265600 chr1B 483903000 483905655 2655 False 657.0 913 93.185667 442 2065 3 chr1B.!!$F3 1623

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
279 280 0.036306 CGGTTTGGGTAGGCTCTTGT 59.964 55.0 0.0 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2088 6173 0.030092 TCCCCTCCAATCCACCTAGG 60.03 60.0 7.41 7.41 39.47 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.671619 GCCTTGTACCGGCAAGCA 60.672 61.111 14.44 0.58 46.77 3.91
18 19 2.046285 GCCTTGTACCGGCAAGCAT 61.046 57.895 14.44 0.00 46.77 3.79
19 20 1.993369 GCCTTGTACCGGCAAGCATC 61.993 60.000 14.44 4.48 46.77 3.91
20 21 0.392998 CCTTGTACCGGCAAGCATCT 60.393 55.000 14.44 0.00 43.17 2.90
22 23 0.392461 TTGTACCGGCAAGCATCTCC 60.392 55.000 0.00 0.00 0.00 3.71
24 25 2.055633 TACCGGCAAGCATCTCCGA 61.056 57.895 0.00 0.00 45.53 4.55
27 28 2.899339 GGCAAGCATCTCCGAGGC 60.899 66.667 0.00 0.00 39.81 4.70
29 30 2.496341 CAAGCATCTCCGAGGCGA 59.504 61.111 0.00 0.00 44.44 5.54
30 31 1.153568 CAAGCATCTCCGAGGCGAA 60.154 57.895 0.00 0.00 44.44 4.70
31 32 0.740868 CAAGCATCTCCGAGGCGAAA 60.741 55.000 0.00 0.00 44.44 3.46
32 33 0.460987 AAGCATCTCCGAGGCGAAAG 60.461 55.000 0.00 0.00 44.44 2.62
47 48 2.888594 CGAAAGCCTTGATTCGTAGGA 58.111 47.619 8.42 0.00 42.47 2.94
49 50 3.491267 CGAAAGCCTTGATTCGTAGGATC 59.509 47.826 8.42 0.00 42.47 3.36
50 51 2.802787 AGCCTTGATTCGTAGGATCG 57.197 50.000 8.42 0.00 33.13 3.69
51 52 1.341531 AGCCTTGATTCGTAGGATCGG 59.658 52.381 8.42 0.00 33.13 4.18
54 55 2.128035 CTTGATTCGTAGGATCGGCAC 58.872 52.381 0.00 0.00 0.00 5.01
70 71 3.760035 ACGATGGCGGCGTCTTCT 61.760 61.111 26.35 9.11 43.17 2.85
71 72 3.257561 CGATGGCGGCGTCTTCTG 61.258 66.667 26.35 13.40 0.00 3.02
72 73 2.184322 GATGGCGGCGTCTTCTGA 59.816 61.111 22.88 0.00 0.00 3.27
84 85 3.372660 GTCTTCTGACGTTGTTCCTCT 57.627 47.619 0.00 0.00 33.15 3.69
86 87 2.693591 TCTTCTGACGTTGTTCCTCTGT 59.306 45.455 0.00 0.00 0.00 3.41
87 88 3.132289 TCTTCTGACGTTGTTCCTCTGTT 59.868 43.478 0.00 0.00 0.00 3.16
89 90 1.867233 CTGACGTTGTTCCTCTGTTGG 59.133 52.381 0.00 0.00 0.00 3.77
90 91 1.226746 GACGTTGTTCCTCTGTTGGG 58.773 55.000 0.00 0.00 0.00 4.12
91 92 0.834612 ACGTTGTTCCTCTGTTGGGA 59.165 50.000 0.00 0.00 0.00 4.37
94 95 0.843309 TTGTTCCTCTGTTGGGAGCA 59.157 50.000 0.00 0.00 41.16 4.26
95 96 1.067295 TGTTCCTCTGTTGGGAGCAT 58.933 50.000 0.00 0.00 38.74 3.79
96 97 1.003580 TGTTCCTCTGTTGGGAGCATC 59.996 52.381 0.00 0.00 38.74 3.91
99 100 0.742281 CCTCTGTTGGGAGCATCGTG 60.742 60.000 0.00 0.00 34.37 4.35
100 101 1.364626 CTCTGTTGGGAGCATCGTGC 61.365 60.000 2.28 2.28 45.46 5.34
110 111 3.686622 GCATCGTGCTGGGAGATAA 57.313 52.632 3.20 0.00 40.96 1.75
111 112 1.506493 GCATCGTGCTGGGAGATAAG 58.494 55.000 3.20 0.00 40.96 1.73
112 113 1.069204 GCATCGTGCTGGGAGATAAGA 59.931 52.381 3.20 0.00 40.96 2.10
114 115 1.403814 TCGTGCTGGGAGATAAGAGG 58.596 55.000 0.00 0.00 0.00 3.69
115 116 0.249657 CGTGCTGGGAGATAAGAGGC 60.250 60.000 0.00 0.00 0.00 4.70
121 122 2.836981 CTGGGAGATAAGAGGCCCTATG 59.163 54.545 0.00 0.00 41.28 2.23
122 123 2.182312 TGGGAGATAAGAGGCCCTATGT 59.818 50.000 0.00 0.00 41.28 2.29
123 124 3.252351 GGGAGATAAGAGGCCCTATGTT 58.748 50.000 0.00 0.00 37.59 2.71
124 125 3.008485 GGGAGATAAGAGGCCCTATGTTG 59.992 52.174 0.00 0.00 37.59 3.33
125 126 3.558109 GGAGATAAGAGGCCCTATGTTGC 60.558 52.174 0.00 0.00 0.00 4.17
127 128 0.179056 TAAGAGGCCCTATGTTGCGC 60.179 55.000 0.00 0.00 0.00 6.09
128 129 1.915078 AAGAGGCCCTATGTTGCGCT 61.915 55.000 9.73 0.00 0.00 5.92
129 130 1.889573 GAGGCCCTATGTTGCGCTC 60.890 63.158 9.73 2.14 0.00 5.03
130 131 2.902343 GGCCCTATGTTGCGCTCC 60.902 66.667 9.73 0.00 0.00 4.70
131 132 2.190578 GCCCTATGTTGCGCTCCT 59.809 61.111 9.73 0.00 0.00 3.69
134 135 0.531532 CCCTATGTTGCGCTCCTCTG 60.532 60.000 9.73 0.00 0.00 3.35
135 136 0.531532 CCTATGTTGCGCTCCTCTGG 60.532 60.000 9.73 0.38 0.00 3.86
136 137 1.153369 TATGTTGCGCTCCTCTGGC 60.153 57.895 9.73 0.00 0.00 4.85
143 144 2.894387 GCTCCTCTGGCGTGCATC 60.894 66.667 0.00 0.00 0.00 3.91
157 158 4.592192 CATCGCTGCCCGGATCGT 62.592 66.667 0.73 0.00 37.59 3.73
158 159 3.849951 ATCGCTGCCCGGATCGTT 61.850 61.111 0.73 0.00 37.59 3.85
159 160 3.792053 ATCGCTGCCCGGATCGTTC 62.792 63.158 0.73 0.00 37.59 3.95
160 161 4.514577 CGCTGCCCGGATCGTTCT 62.515 66.667 0.73 0.00 0.00 3.01
161 162 2.125106 GCTGCCCGGATCGTTCTT 60.125 61.111 0.73 0.00 0.00 2.52
162 163 2.174319 GCTGCCCGGATCGTTCTTC 61.174 63.158 0.73 0.00 0.00 2.87
164 165 0.528684 CTGCCCGGATCGTTCTTCTC 60.529 60.000 0.73 0.00 0.00 2.87
165 166 0.970937 TGCCCGGATCGTTCTTCTCT 60.971 55.000 0.73 0.00 0.00 3.10
166 167 0.528684 GCCCGGATCGTTCTTCTCTG 60.529 60.000 0.73 0.00 0.00 3.35
167 168 0.103208 CCCGGATCGTTCTTCTCTGG 59.897 60.000 0.73 0.00 35.56 3.86
168 169 0.528684 CCGGATCGTTCTTCTCTGGC 60.529 60.000 0.00 0.00 0.00 4.85
169 170 0.867753 CGGATCGTTCTTCTCTGGCG 60.868 60.000 0.00 0.00 0.00 5.69
170 171 1.148759 GGATCGTTCTTCTCTGGCGC 61.149 60.000 0.00 0.00 0.00 6.53
171 172 0.179124 GATCGTTCTTCTCTGGCGCT 60.179 55.000 7.64 0.00 0.00 5.92
173 174 1.103803 TCGTTCTTCTCTGGCGCTAT 58.896 50.000 7.64 0.00 0.00 2.97
174 175 1.202302 TCGTTCTTCTCTGGCGCTATG 60.202 52.381 7.64 0.00 0.00 2.23
175 176 1.469940 CGTTCTTCTCTGGCGCTATGT 60.470 52.381 7.64 0.00 0.00 2.29
176 177 2.622436 GTTCTTCTCTGGCGCTATGTT 58.378 47.619 7.64 0.00 0.00 2.71
177 178 2.586258 TCTTCTCTGGCGCTATGTTC 57.414 50.000 7.64 0.00 0.00 3.18
178 179 1.202302 TCTTCTCTGGCGCTATGTTCG 60.202 52.381 7.64 0.00 0.00 3.95
179 180 0.179111 TTCTCTGGCGCTATGTTCGG 60.179 55.000 7.64 0.00 0.00 4.30
180 181 1.141881 CTCTGGCGCTATGTTCGGT 59.858 57.895 7.64 0.00 0.00 4.69
181 182 0.872021 CTCTGGCGCTATGTTCGGTC 60.872 60.000 7.64 0.00 0.00 4.79
182 183 2.202690 TGGCGCTATGTTCGGTCG 60.203 61.111 7.64 0.00 0.00 4.79
183 184 2.202703 GGCGCTATGTTCGGTCGT 60.203 61.111 7.64 0.00 0.00 4.34
184 185 2.228914 GGCGCTATGTTCGGTCGTC 61.229 63.158 7.64 0.00 0.00 4.20
185 186 2.565394 GCGCTATGTTCGGTCGTCG 61.565 63.158 0.00 0.00 40.90 5.12
187 188 1.226603 GCTATGTTCGGTCGTCGCT 60.227 57.895 0.00 0.00 39.05 4.93
189 190 0.866061 CTATGTTCGGTCGTCGCTGG 60.866 60.000 0.00 0.00 39.05 4.85
190 191 2.877360 TATGTTCGGTCGTCGCTGGC 62.877 60.000 0.00 0.00 39.05 4.85
191 192 4.719369 GTTCGGTCGTCGCTGGCT 62.719 66.667 0.00 0.00 39.05 4.75
192 193 4.415332 TTCGGTCGTCGCTGGCTC 62.415 66.667 0.00 0.00 39.05 4.70
195 196 2.102553 GGTCGTCGCTGGCTCTAC 59.897 66.667 0.00 0.00 0.00 2.59
196 197 2.102553 GTCGTCGCTGGCTCTACC 59.897 66.667 0.00 0.00 39.84 3.18
208 209 0.905357 GCTCTACCAAGGAAGCTGGA 59.095 55.000 0.00 0.00 37.40 3.86
209 210 1.134551 GCTCTACCAAGGAAGCTGGAG 60.135 57.143 0.00 0.00 37.40 3.86
210 211 2.183679 CTCTACCAAGGAAGCTGGAGT 58.816 52.381 0.00 0.00 37.40 3.85
211 212 2.569404 CTCTACCAAGGAAGCTGGAGTT 59.431 50.000 0.00 0.00 37.40 3.01
212 213 2.303022 TCTACCAAGGAAGCTGGAGTTG 59.697 50.000 0.00 0.00 37.40 3.16
214 215 0.251077 CCAAGGAAGCTGGAGTTGCT 60.251 55.000 0.00 0.00 43.32 3.91
215 216 0.879765 CAAGGAAGCTGGAGTTGCTG 59.120 55.000 0.00 0.00 41.03 4.41
216 217 0.475906 AAGGAAGCTGGAGTTGCTGT 59.524 50.000 0.00 0.00 41.03 4.40
217 218 0.475906 AGGAAGCTGGAGTTGCTGTT 59.524 50.000 0.00 0.00 41.03 3.16
218 219 0.877743 GGAAGCTGGAGTTGCTGTTC 59.122 55.000 0.00 0.00 41.03 3.18
219 220 1.544314 GGAAGCTGGAGTTGCTGTTCT 60.544 52.381 0.00 0.00 41.03 3.01
220 221 2.225467 GAAGCTGGAGTTGCTGTTCTT 58.775 47.619 0.00 0.00 41.03 2.52
222 223 0.514691 GCTGGAGTTGCTGTTCTTCG 59.485 55.000 0.00 0.00 0.00 3.79
223 224 1.151668 CTGGAGTTGCTGTTCTTCGG 58.848 55.000 0.00 0.00 0.00 4.30
224 225 0.468226 TGGAGTTGCTGTTCTTCGGT 59.532 50.000 0.00 0.00 0.00 4.69
225 226 0.868406 GGAGTTGCTGTTCTTCGGTG 59.132 55.000 0.00 0.00 0.00 4.94
228 229 2.413453 GAGTTGCTGTTCTTCGGTGATC 59.587 50.000 0.00 0.00 0.00 2.92
230 231 1.795768 TGCTGTTCTTCGGTGATCAC 58.204 50.000 17.91 17.91 0.00 3.06
259 260 3.967335 GAGACGCGGCGAGGCTAT 61.967 66.667 30.94 4.72 0.00 2.97
260 261 3.882835 GAGACGCGGCGAGGCTATC 62.883 68.421 30.94 14.78 0.00 2.08
271 272 2.528041 GAGGCTATCGGTTTGGGTAG 57.472 55.000 0.00 0.00 0.00 3.18
272 273 1.070289 GAGGCTATCGGTTTGGGTAGG 59.930 57.143 0.00 0.00 0.00 3.18
273 274 0.534427 GGCTATCGGTTTGGGTAGGC 60.534 60.000 0.00 0.00 33.50 3.93
274 275 0.468648 GCTATCGGTTTGGGTAGGCT 59.531 55.000 0.00 0.00 0.00 4.58
275 276 1.540580 GCTATCGGTTTGGGTAGGCTC 60.541 57.143 0.00 0.00 0.00 4.70
276 277 2.040178 CTATCGGTTTGGGTAGGCTCT 58.960 52.381 0.00 0.00 0.00 4.09
277 278 1.286248 ATCGGTTTGGGTAGGCTCTT 58.714 50.000 0.00 0.00 0.00 2.85
278 279 0.323629 TCGGTTTGGGTAGGCTCTTG 59.676 55.000 0.00 0.00 0.00 3.02
279 280 0.036306 CGGTTTGGGTAGGCTCTTGT 59.964 55.000 0.00 0.00 0.00 3.16
280 281 1.276989 CGGTTTGGGTAGGCTCTTGTA 59.723 52.381 0.00 0.00 0.00 2.41
281 282 2.093128 CGGTTTGGGTAGGCTCTTGTAT 60.093 50.000 0.00 0.00 0.00 2.29
282 283 3.279434 GGTTTGGGTAGGCTCTTGTATG 58.721 50.000 0.00 0.00 0.00 2.39
283 284 3.308188 GGTTTGGGTAGGCTCTTGTATGT 60.308 47.826 0.00 0.00 0.00 2.29
284 285 3.906720 TTGGGTAGGCTCTTGTATGTC 57.093 47.619 0.00 0.00 0.00 3.06
285 286 1.754803 TGGGTAGGCTCTTGTATGTCG 59.245 52.381 0.00 0.00 0.00 4.35
286 287 1.755380 GGGTAGGCTCTTGTATGTCGT 59.245 52.381 0.00 0.00 0.00 4.34
287 288 2.954318 GGGTAGGCTCTTGTATGTCGTA 59.046 50.000 0.00 0.00 0.00 3.43
288 289 3.004524 GGGTAGGCTCTTGTATGTCGTAG 59.995 52.174 0.00 0.00 0.00 3.51
289 290 3.631227 GGTAGGCTCTTGTATGTCGTAGT 59.369 47.826 0.00 0.00 0.00 2.73
290 291 4.097589 GGTAGGCTCTTGTATGTCGTAGTT 59.902 45.833 0.00 0.00 0.00 2.24
291 292 4.111375 AGGCTCTTGTATGTCGTAGTTG 57.889 45.455 0.00 0.00 0.00 3.16
292 293 3.510360 AGGCTCTTGTATGTCGTAGTTGT 59.490 43.478 0.00 0.00 0.00 3.32
293 294 3.612860 GGCTCTTGTATGTCGTAGTTGTG 59.387 47.826 0.00 0.00 0.00 3.33
294 295 4.235360 GCTCTTGTATGTCGTAGTTGTGT 58.765 43.478 0.00 0.00 0.00 3.72
295 296 5.396484 GCTCTTGTATGTCGTAGTTGTGTA 58.604 41.667 0.00 0.00 0.00 2.90
296 297 5.512082 GCTCTTGTATGTCGTAGTTGTGTAG 59.488 44.000 0.00 0.00 0.00 2.74
297 298 6.564709 TCTTGTATGTCGTAGTTGTGTAGT 57.435 37.500 0.00 0.00 0.00 2.73
298 299 6.605849 TCTTGTATGTCGTAGTTGTGTAGTC 58.394 40.000 0.00 0.00 0.00 2.59
299 300 4.961511 TGTATGTCGTAGTTGTGTAGTCG 58.038 43.478 0.00 0.00 0.00 4.18
302 303 2.613595 TGTCGTAGTTGTGTAGTCGTGT 59.386 45.455 0.00 0.00 0.00 4.49
303 304 2.969306 GTCGTAGTTGTGTAGTCGTGTG 59.031 50.000 0.00 0.00 0.00 3.82
305 306 3.065233 TCGTAGTTGTGTAGTCGTGTGTT 59.935 43.478 0.00 0.00 0.00 3.32
308 309 3.592059 AGTTGTGTAGTCGTGTGTTGTT 58.408 40.909 0.00 0.00 0.00 2.83
311 312 2.924926 TGTGTAGTCGTGTGTTGTTGTC 59.075 45.455 0.00 0.00 0.00 3.18
312 313 3.184541 GTGTAGTCGTGTGTTGTTGTCT 58.815 45.455 0.00 0.00 0.00 3.41
315 316 3.740044 AGTCGTGTGTTGTTGTCTTTG 57.260 42.857 0.00 0.00 0.00 2.77
316 317 3.071479 AGTCGTGTGTTGTTGTCTTTGT 58.929 40.909 0.00 0.00 0.00 2.83
317 318 4.247258 AGTCGTGTGTTGTTGTCTTTGTA 58.753 39.130 0.00 0.00 0.00 2.41
318 319 4.873827 AGTCGTGTGTTGTTGTCTTTGTAT 59.126 37.500 0.00 0.00 0.00 2.29
319 320 4.961551 GTCGTGTGTTGTTGTCTTTGTATG 59.038 41.667 0.00 0.00 0.00 2.39
321 322 4.728131 CGTGTGTTGTTGTCTTTGTATGTG 59.272 41.667 0.00 0.00 0.00 3.21
322 323 5.636837 GTGTGTTGTTGTCTTTGTATGTGT 58.363 37.500 0.00 0.00 0.00 3.72
323 324 5.737290 GTGTGTTGTTGTCTTTGTATGTGTC 59.263 40.000 0.00 0.00 0.00 3.67
324 325 5.412904 TGTGTTGTTGTCTTTGTATGTGTCA 59.587 36.000 0.00 0.00 0.00 3.58
325 326 5.965334 GTGTTGTTGTCTTTGTATGTGTCAG 59.035 40.000 0.00 0.00 0.00 3.51
326 327 5.065859 TGTTGTTGTCTTTGTATGTGTCAGG 59.934 40.000 0.00 0.00 0.00 3.86
328 329 4.574421 TGTTGTCTTTGTATGTGTCAGGTG 59.426 41.667 0.00 0.00 0.00 4.00
329 330 4.415881 TGTCTTTGTATGTGTCAGGTGT 57.584 40.909 0.00 0.00 0.00 4.16
330 331 4.126437 TGTCTTTGTATGTGTCAGGTGTG 58.874 43.478 0.00 0.00 0.00 3.82
331 332 3.498397 GTCTTTGTATGTGTCAGGTGTGG 59.502 47.826 0.00 0.00 0.00 4.17
332 333 3.389656 TCTTTGTATGTGTCAGGTGTGGA 59.610 43.478 0.00 0.00 0.00 4.02
333 334 3.401033 TTGTATGTGTCAGGTGTGGAG 57.599 47.619 0.00 0.00 0.00 3.86
335 336 2.703536 TGTATGTGTCAGGTGTGGAGTT 59.296 45.455 0.00 0.00 0.00 3.01
336 337 2.260844 ATGTGTCAGGTGTGGAGTTG 57.739 50.000 0.00 0.00 0.00 3.16
338 339 1.299541 GTGTCAGGTGTGGAGTTGTG 58.700 55.000 0.00 0.00 0.00 3.33
340 341 0.179045 GTCAGGTGTGGAGTTGTGCT 60.179 55.000 0.00 0.00 0.00 4.40
341 342 1.070134 GTCAGGTGTGGAGTTGTGCTA 59.930 52.381 0.00 0.00 0.00 3.49
342 343 1.070134 TCAGGTGTGGAGTTGTGCTAC 59.930 52.381 0.00 0.00 0.00 3.58
344 345 1.566018 GGTGTGGAGTTGTGCTACGC 61.566 60.000 0.00 0.00 39.01 4.42
345 346 0.600255 GTGTGGAGTTGTGCTACGCT 60.600 55.000 0.00 0.00 39.29 5.07
346 347 0.319555 TGTGGAGTTGTGCTACGCTC 60.320 55.000 0.00 0.00 39.29 5.03
348 349 1.080705 GGAGTTGTGCTACGCTCGT 60.081 57.895 0.00 0.00 0.00 4.18
350 351 0.435008 GAGTTGTGCTACGCTCGTTG 59.565 55.000 0.00 0.00 0.00 4.10
351 352 0.249322 AGTTGTGCTACGCTCGTTGT 60.249 50.000 0.00 0.00 0.00 3.32
352 353 0.580104 GTTGTGCTACGCTCGTTGTT 59.420 50.000 0.00 0.00 0.00 2.83
353 354 0.856641 TTGTGCTACGCTCGTTGTTC 59.143 50.000 0.00 0.00 0.00 3.18
354 355 0.249114 TGTGCTACGCTCGTTGTTCA 60.249 50.000 0.00 0.50 0.00 3.18
355 356 0.161024 GTGCTACGCTCGTTGTTCAC 59.839 55.000 0.00 0.20 0.00 3.18
356 357 0.249114 TGCTACGCTCGTTGTTCACA 60.249 50.000 0.00 0.00 0.00 3.58
357 358 0.435008 GCTACGCTCGTTGTTCACAG 59.565 55.000 0.00 0.00 0.00 3.66
365 366 3.290776 GTTGTTCACAGCGAGAGGT 57.709 52.632 0.00 0.00 46.81 3.85
367 368 2.329379 GTTGTTCACAGCGAGAGGTAG 58.671 52.381 0.00 0.00 41.81 3.18
368 369 1.905637 TGTTCACAGCGAGAGGTAGA 58.094 50.000 0.00 0.00 41.81 2.59
369 370 2.447443 TGTTCACAGCGAGAGGTAGAT 58.553 47.619 0.00 0.00 41.81 1.98
370 371 2.164422 TGTTCACAGCGAGAGGTAGATG 59.836 50.000 0.00 0.00 41.81 2.90
371 372 2.130272 TCACAGCGAGAGGTAGATGT 57.870 50.000 0.00 0.00 41.81 3.06
372 373 2.200792 CACAGCGAGAGGTAGATGTG 57.799 55.000 0.00 0.00 46.01 3.21
373 374 1.107114 ACAGCGAGAGGTAGATGTGG 58.893 55.000 0.00 0.00 41.81 4.17
374 375 1.107114 CAGCGAGAGGTAGATGTGGT 58.893 55.000 0.00 0.00 41.81 4.16
375 376 1.478510 CAGCGAGAGGTAGATGTGGTT 59.521 52.381 0.00 0.00 41.81 3.67
378 379 2.426024 GCGAGAGGTAGATGTGGTTGTA 59.574 50.000 0.00 0.00 0.00 2.41
380 381 4.611943 CGAGAGGTAGATGTGGTTGTATG 58.388 47.826 0.00 0.00 0.00 2.39
382 383 5.593010 GAGAGGTAGATGTGGTTGTATGAC 58.407 45.833 0.00 0.00 0.00 3.06
388 389 9.381038 AGGTAGATGTGGTTGTATGACTATATT 57.619 33.333 0.00 0.00 0.00 1.28
392 393 9.988815 AGATGTGGTTGTATGACTATATTTCTC 57.011 33.333 0.00 0.00 0.00 2.87
393 394 9.988815 GATGTGGTTGTATGACTATATTTCTCT 57.011 33.333 0.00 0.00 0.00 3.10
394 395 9.988815 ATGTGGTTGTATGACTATATTTCTCTC 57.011 33.333 0.00 0.00 0.00 3.20
395 396 8.421784 TGTGGTTGTATGACTATATTTCTCTCC 58.578 37.037 0.00 0.00 0.00 3.71
396 397 8.643324 GTGGTTGTATGACTATATTTCTCTCCT 58.357 37.037 0.00 0.00 0.00 3.69
398 399 9.699703 GGTTGTATGACTATATTTCTCTCCTTC 57.300 37.037 0.00 0.00 0.00 3.46
412 413 8.611051 TTTCTCTCCTTCTATAAAGCTAAGGT 57.389 34.615 9.91 0.00 39.62 3.50
413 414 9.710818 TTTCTCTCCTTCTATAAAGCTAAGGTA 57.289 33.333 9.91 1.10 39.62 3.08
415 416 7.444792 TCTCTCCTTCTATAAAGCTAAGGTACG 59.555 40.741 9.91 2.32 39.62 3.67
416 417 6.016443 TCTCCTTCTATAAAGCTAAGGTACGC 60.016 42.308 9.91 0.00 39.62 4.42
417 418 5.595542 TCCTTCTATAAAGCTAAGGTACGCA 59.404 40.000 9.91 0.00 39.62 5.24
418 419 6.097270 TCCTTCTATAAAGCTAAGGTACGCAA 59.903 38.462 9.91 0.00 39.62 4.85
419 420 6.929606 CCTTCTATAAAGCTAAGGTACGCAAT 59.070 38.462 2.95 0.00 34.92 3.56
420 421 7.441458 CCTTCTATAAAGCTAAGGTACGCAATT 59.559 37.037 2.95 0.00 34.92 2.32
435 436 3.449322 GCAATTTGCGTACTCTCGAAA 57.551 42.857 5.49 0.00 31.71 3.46
436 437 3.805823 GCAATTTGCGTACTCTCGAAAA 58.194 40.909 5.49 0.00 41.60 2.29
742 3450 0.097674 AGCGTGCAAGATTCATTCGC 59.902 50.000 2.99 3.92 41.96 4.70
745 3453 1.900237 GTGCAAGATTCATTCGCACC 58.100 50.000 0.00 0.00 45.57 5.01
750 3458 2.238942 AGATTCATTCGCACCGCATA 57.761 45.000 0.00 0.00 0.00 3.14
790 3498 8.999431 TCACCAAGTATAGACAAAGATGTTTTC 58.001 33.333 0.00 0.00 40.74 2.29
916 3630 4.137872 GGGTAGTGGTGCGCGCTA 62.138 66.667 33.29 12.92 0.00 4.26
1023 4459 7.327214 GCCTATAAATAGATGTGCTCTAGCTT 58.673 38.462 3.26 0.00 39.82 3.74
1150 4600 0.179009 ATTGTCCTCCATGCCATCCG 60.179 55.000 0.00 0.00 0.00 4.18
1168 4618 0.255890 CGGGTCATGGGAATCCTTGT 59.744 55.000 0.00 0.00 38.78 3.16
1187 4637 2.137523 GTACACGTGAATGGTCGGTTT 58.862 47.619 25.01 0.00 0.00 3.27
1480 5385 2.434185 GCGCTCCACCATCAACGA 60.434 61.111 0.00 0.00 0.00 3.85
1534 5440 2.868583 CGGTTCAAGCTCGAATCATGAT 59.131 45.455 1.18 1.18 0.00 2.45
1565 5472 9.780413 GTTTCTCCAAAAATAAAGCTCAGATAG 57.220 33.333 0.00 0.00 0.00 2.08
1584 5491 0.530744 GGATGAGCACTGTCACCGTA 59.469 55.000 0.00 0.00 0.00 4.02
1621 5528 3.133464 CCCACATTGCACGCCGAT 61.133 61.111 0.00 0.00 0.00 4.18
1632 5539 1.464608 GCACGCCGATAATGCATACAT 59.535 47.619 0.00 0.00 39.23 2.29
1640 5547 5.505489 GCCGATAATGCATACATTGTTGTCA 60.505 40.000 0.00 0.00 46.08 3.58
1791 5699 4.283678 TCCACTTAAAACGCATTTGTTCG 58.716 39.130 0.00 0.00 32.27 3.95
1826 5735 7.519032 TTTTCTTAGGGACCAGTGTTTAATG 57.481 36.000 0.00 0.00 0.00 1.90
1835 5906 8.557450 AGGGACCAGTGTTTAATGTATTTCTAT 58.443 33.333 0.00 0.00 0.00 1.98
1949 6034 1.538512 GTAGCTGTACACTCGTGGTCA 59.461 52.381 0.00 0.09 34.19 4.02
1965 6050 5.105513 TCGTGGTCACAATGTCTACACATAT 60.106 40.000 10.15 0.00 42.89 1.78
1966 6051 5.005682 CGTGGTCACAATGTCTACACATATG 59.994 44.000 0.00 0.00 42.89 1.78
2065 6150 3.992943 TTCCACATGTACCACCCTTAG 57.007 47.619 0.00 0.00 0.00 2.18
2067 6152 1.408266 CCACATGTACCACCCTTAGGC 60.408 57.143 0.00 0.00 36.11 3.93
2068 6153 1.559682 CACATGTACCACCCTTAGGCT 59.440 52.381 0.00 0.00 36.11 4.58
2069 6154 2.026262 CACATGTACCACCCTTAGGCTT 60.026 50.000 0.00 0.00 36.11 4.35
2070 6155 2.647802 ACATGTACCACCCTTAGGCTTT 59.352 45.455 0.00 0.00 36.11 3.51
2071 6156 2.871096 TGTACCACCCTTAGGCTTTG 57.129 50.000 0.00 0.00 36.11 2.77
2072 6157 2.059490 TGTACCACCCTTAGGCTTTGT 58.941 47.619 0.00 0.00 36.11 2.83
2073 6158 2.444010 TGTACCACCCTTAGGCTTTGTT 59.556 45.455 0.00 0.00 36.11 2.83
2074 6159 2.287977 ACCACCCTTAGGCTTTGTTC 57.712 50.000 0.00 0.00 36.11 3.18
2075 6160 1.165270 CCACCCTTAGGCTTTGTTCG 58.835 55.000 0.00 0.00 36.11 3.95
2076 6161 1.165270 CACCCTTAGGCTTTGTTCGG 58.835 55.000 0.00 0.00 36.11 4.30
2077 6162 0.769247 ACCCTTAGGCTTTGTTCGGT 59.231 50.000 0.00 0.00 36.11 4.69
2078 6163 1.144298 ACCCTTAGGCTTTGTTCGGTT 59.856 47.619 0.00 0.00 36.11 4.44
2079 6164 2.372837 ACCCTTAGGCTTTGTTCGGTTA 59.627 45.455 0.00 0.00 36.11 2.85
2080 6165 3.181441 ACCCTTAGGCTTTGTTCGGTTAA 60.181 43.478 0.00 0.00 36.11 2.01
2081 6166 4.014406 CCCTTAGGCTTTGTTCGGTTAAT 58.986 43.478 0.00 0.00 0.00 1.40
2082 6167 4.095932 CCCTTAGGCTTTGTTCGGTTAATC 59.904 45.833 0.00 0.00 0.00 1.75
2083 6168 4.095932 CCTTAGGCTTTGTTCGGTTAATCC 59.904 45.833 0.00 0.00 0.00 3.01
2084 6169 2.443416 AGGCTTTGTTCGGTTAATCCC 58.557 47.619 0.00 0.00 0.00 3.85
2085 6170 2.164338 GGCTTTGTTCGGTTAATCCCA 58.836 47.619 0.00 0.00 0.00 4.37
2086 6171 2.559231 GGCTTTGTTCGGTTAATCCCAA 59.441 45.455 0.00 0.00 0.00 4.12
2087 6172 3.571571 GCTTTGTTCGGTTAATCCCAAC 58.428 45.455 0.00 0.00 0.00 3.77
2088 6173 3.613193 GCTTTGTTCGGTTAATCCCAACC 60.613 47.826 0.00 0.00 43.88 3.77
2089 6174 2.203470 TGTTCGGTTAATCCCAACCC 57.797 50.000 0.00 0.00 44.37 4.11
2090 6175 1.706305 TGTTCGGTTAATCCCAACCCT 59.294 47.619 0.00 0.00 44.37 4.34
2091 6176 2.911636 TGTTCGGTTAATCCCAACCCTA 59.088 45.455 0.00 0.00 44.37 3.53
2092 6177 3.054948 TGTTCGGTTAATCCCAACCCTAG 60.055 47.826 0.00 0.00 44.37 3.02
2093 6178 2.121129 TCGGTTAATCCCAACCCTAGG 58.879 52.381 0.06 0.06 44.37 3.02
2094 6179 1.841919 CGGTTAATCCCAACCCTAGGT 59.158 52.381 8.29 0.00 44.37 3.08
2095 6180 2.420967 CGGTTAATCCCAACCCTAGGTG 60.421 54.545 8.29 0.00 44.37 4.00
2096 6181 2.092049 GGTTAATCCCAACCCTAGGTGG 60.092 54.545 8.29 9.77 41.89 4.61
2097 6182 2.848071 GTTAATCCCAACCCTAGGTGGA 59.152 50.000 18.08 13.08 35.34 4.02
2098 6183 2.303660 AATCCCAACCCTAGGTGGAT 57.696 50.000 18.08 14.56 39.30 3.41
2099 6184 2.303660 ATCCCAACCCTAGGTGGATT 57.696 50.000 18.08 4.13 35.72 3.01
2100 6185 1.295020 TCCCAACCCTAGGTGGATTG 58.705 55.000 18.08 11.39 35.34 2.67
2101 6186 0.258774 CCCAACCCTAGGTGGATTGG 59.741 60.000 18.08 18.12 35.34 3.16
2102 6187 1.295020 CCAACCCTAGGTGGATTGGA 58.705 55.000 19.51 0.00 38.11 3.53
2103 6188 1.212935 CCAACCCTAGGTGGATTGGAG 59.787 57.143 19.51 0.93 38.11 3.86
2104 6189 1.212935 CAACCCTAGGTGGATTGGAGG 59.787 57.143 8.29 0.00 35.34 4.30
2105 6190 2.544768 CCCTAGGTGGATTGGAGGG 58.455 63.158 8.29 0.00 41.02 4.30
2106 6191 1.062488 CCCTAGGTGGATTGGAGGGG 61.062 65.000 8.29 0.00 42.85 4.79
2107 6192 0.030092 CCTAGGTGGATTGGAGGGGA 60.030 60.000 0.00 0.00 38.35 4.81
2108 6193 1.416608 CCTAGGTGGATTGGAGGGGAT 60.417 57.143 0.00 0.00 38.35 3.85
2109 6194 2.422746 CTAGGTGGATTGGAGGGGATT 58.577 52.381 0.00 0.00 0.00 3.01
2110 6195 1.698874 AGGTGGATTGGAGGGGATTT 58.301 50.000 0.00 0.00 0.00 2.17
2111 6196 1.288932 AGGTGGATTGGAGGGGATTTG 59.711 52.381 0.00 0.00 0.00 2.32
2112 6197 1.114627 GTGGATTGGAGGGGATTTGC 58.885 55.000 0.00 0.00 0.00 3.68
2113 6198 0.709397 TGGATTGGAGGGGATTTGCA 59.291 50.000 0.00 0.00 0.00 4.08
2114 6199 1.342275 TGGATTGGAGGGGATTTGCAG 60.342 52.381 0.00 0.00 0.00 4.41
2115 6200 1.406903 GATTGGAGGGGATTTGCAGG 58.593 55.000 0.00 0.00 0.00 4.85
2116 6201 0.031817 ATTGGAGGGGATTTGCAGGG 60.032 55.000 0.00 0.00 0.00 4.45
2117 6202 1.145900 TTGGAGGGGATTTGCAGGGA 61.146 55.000 0.00 0.00 0.00 4.20
2118 6203 0.925720 TGGAGGGGATTTGCAGGGAT 60.926 55.000 0.00 0.00 0.00 3.85
2119 6204 0.262876 GGAGGGGATTTGCAGGGATT 59.737 55.000 0.00 0.00 0.00 3.01
2120 6205 1.343377 GGAGGGGATTTGCAGGGATTT 60.343 52.381 0.00 0.00 0.00 2.17
2121 6206 2.470990 GAGGGGATTTGCAGGGATTTT 58.529 47.619 0.00 0.00 0.00 1.82
2122 6207 2.169144 GAGGGGATTTGCAGGGATTTTG 59.831 50.000 0.00 0.00 0.00 2.44
2123 6208 1.210234 GGGGATTTGCAGGGATTTTGG 59.790 52.381 0.00 0.00 0.00 3.28
2124 6209 1.407299 GGGATTTGCAGGGATTTTGGC 60.407 52.381 0.00 0.00 0.00 4.52
2125 6210 1.556451 GGATTTGCAGGGATTTTGGCT 59.444 47.619 0.00 0.00 0.00 4.75
2126 6211 2.026915 GGATTTGCAGGGATTTTGGCTT 60.027 45.455 0.00 0.00 0.00 4.35
2127 6212 2.547299 TTTGCAGGGATTTTGGCTTG 57.453 45.000 0.00 0.00 0.00 4.01
2128 6213 0.035176 TTGCAGGGATTTTGGCTTGC 59.965 50.000 0.00 0.00 0.00 4.01
2129 6214 1.120184 TGCAGGGATTTTGGCTTGCA 61.120 50.000 0.00 0.00 39.03 4.08
2130 6215 0.390735 GCAGGGATTTTGGCTTGCAG 60.391 55.000 0.00 0.00 0.00 4.41
2131 6216 0.248289 CAGGGATTTTGGCTTGCAGG 59.752 55.000 0.00 0.00 0.00 4.85
2132 6217 0.906282 AGGGATTTTGGCTTGCAGGG 60.906 55.000 0.00 0.00 0.00 4.45
2133 6218 1.598517 GGATTTTGGCTTGCAGGGG 59.401 57.895 0.00 0.00 0.00 4.79
2134 6219 0.904394 GGATTTTGGCTTGCAGGGGA 60.904 55.000 0.00 0.00 0.00 4.81
2135 6220 1.197812 GATTTTGGCTTGCAGGGGAT 58.802 50.000 0.00 0.00 0.00 3.85
2136 6221 1.556451 GATTTTGGCTTGCAGGGGATT 59.444 47.619 0.00 0.00 0.00 3.01
2137 6222 2.317371 TTTTGGCTTGCAGGGGATTA 57.683 45.000 0.00 0.00 0.00 1.75
2138 6223 2.317371 TTTGGCTTGCAGGGGATTAA 57.683 45.000 0.00 0.00 0.00 1.40
2139 6224 2.548464 TTGGCTTGCAGGGGATTAAT 57.452 45.000 0.00 0.00 0.00 1.40
2140 6225 2.548464 TGGCTTGCAGGGGATTAATT 57.452 45.000 0.00 0.00 0.00 1.40
2141 6226 2.387757 TGGCTTGCAGGGGATTAATTC 58.612 47.619 0.00 0.00 0.00 2.17
2142 6227 1.688735 GGCTTGCAGGGGATTAATTCC 59.311 52.381 3.88 3.88 44.62 3.01
2143 6228 2.670939 GCTTGCAGGGGATTAATTCCT 58.329 47.619 12.74 8.82 44.75 3.36
2144 6229 2.625314 GCTTGCAGGGGATTAATTCCTC 59.375 50.000 12.74 4.42 46.63 3.71
2152 6237 3.779444 GGGATTAATTCCTCCCCAATCC 58.221 50.000 5.42 9.00 44.68 3.01
2153 6238 3.779444 GGATTAATTCCTCCCCAATCCC 58.221 50.000 3.43 0.00 41.78 3.85
2154 6239 3.502303 GGATTAATTCCTCCCCAATCCCC 60.502 52.174 3.43 0.00 41.78 4.81
2155 6240 2.624846 TAATTCCTCCCCAATCCCCT 57.375 50.000 0.00 0.00 0.00 4.79
2156 6241 1.711684 AATTCCTCCCCAATCCCCTT 58.288 50.000 0.00 0.00 0.00 3.95
2157 6242 1.711684 ATTCCTCCCCAATCCCCTTT 58.288 50.000 0.00 0.00 0.00 3.11
2158 6243 2.387007 TTCCTCCCCAATCCCCTTTA 57.613 50.000 0.00 0.00 0.00 1.85
2159 6244 2.387007 TCCTCCCCAATCCCCTTTAA 57.613 50.000 0.00 0.00 0.00 1.52
2160 6245 2.661852 TCCTCCCCAATCCCCTTTAAA 58.338 47.619 0.00 0.00 0.00 1.52
2161 6246 3.215049 TCCTCCCCAATCCCCTTTAAAT 58.785 45.455 0.00 0.00 0.00 1.40
2162 6247 3.206639 TCCTCCCCAATCCCCTTTAAATC 59.793 47.826 0.00 0.00 0.00 2.17
2163 6248 3.576861 CTCCCCAATCCCCTTTAAATCC 58.423 50.000 0.00 0.00 0.00 3.01
2164 6249 2.936576 TCCCCAATCCCCTTTAAATCCA 59.063 45.455 0.00 0.00 0.00 3.41
2165 6250 3.038280 CCCCAATCCCCTTTAAATCCAC 58.962 50.000 0.00 0.00 0.00 4.02
2166 6251 3.038280 CCCAATCCCCTTTAAATCCACC 58.962 50.000 0.00 0.00 0.00 4.61
2167 6252 3.310583 CCCAATCCCCTTTAAATCCACCT 60.311 47.826 0.00 0.00 0.00 4.00
2168 6253 3.960755 CCAATCCCCTTTAAATCCACCTC 59.039 47.826 0.00 0.00 0.00 3.85
2169 6254 4.571792 CCAATCCCCTTTAAATCCACCTCA 60.572 45.833 0.00 0.00 0.00 3.86
2170 6255 4.965283 ATCCCCTTTAAATCCACCTCAA 57.035 40.909 0.00 0.00 0.00 3.02
2171 6256 4.042271 TCCCCTTTAAATCCACCTCAAC 57.958 45.455 0.00 0.00 0.00 3.18
2172 6257 3.096852 CCCCTTTAAATCCACCTCAACC 58.903 50.000 0.00 0.00 0.00 3.77
2173 6258 2.752903 CCCTTTAAATCCACCTCAACCG 59.247 50.000 0.00 0.00 0.00 4.44
2174 6259 3.560453 CCCTTTAAATCCACCTCAACCGA 60.560 47.826 0.00 0.00 0.00 4.69
2175 6260 4.076394 CCTTTAAATCCACCTCAACCGAA 58.924 43.478 0.00 0.00 0.00 4.30
2176 6261 4.082949 CCTTTAAATCCACCTCAACCGAAC 60.083 45.833 0.00 0.00 0.00 3.95
2177 6262 2.649531 AAATCCACCTCAACCGAACA 57.350 45.000 0.00 0.00 0.00 3.18
2178 6263 2.649531 AATCCACCTCAACCGAACAA 57.350 45.000 0.00 0.00 0.00 2.83
2179 6264 2.185004 ATCCACCTCAACCGAACAAG 57.815 50.000 0.00 0.00 0.00 3.16
2180 6265 0.534203 TCCACCTCAACCGAACAAGC 60.534 55.000 0.00 0.00 0.00 4.01
2181 6266 1.515521 CCACCTCAACCGAACAAGCC 61.516 60.000 0.00 0.00 0.00 4.35
2182 6267 1.228154 ACCTCAACCGAACAAGCCC 60.228 57.895 0.00 0.00 0.00 5.19
2183 6268 1.073199 CCTCAACCGAACAAGCCCT 59.927 57.895 0.00 0.00 0.00 5.19
2184 6269 0.537371 CCTCAACCGAACAAGCCCTT 60.537 55.000 0.00 0.00 0.00 3.95
2185 6270 1.271163 CCTCAACCGAACAAGCCCTTA 60.271 52.381 0.00 0.00 0.00 2.69
2186 6271 2.500229 CTCAACCGAACAAGCCCTTAA 58.500 47.619 0.00 0.00 0.00 1.85
2187 6272 2.484264 CTCAACCGAACAAGCCCTTAAG 59.516 50.000 0.00 0.00 0.00 1.85
2188 6273 2.105134 TCAACCGAACAAGCCCTTAAGA 59.895 45.455 3.36 0.00 0.00 2.10
2220 6305 2.198334 CCCCCTTCCCATAGTTCTCT 57.802 55.000 0.00 0.00 0.00 3.10
2221 6306 2.050918 CCCCCTTCCCATAGTTCTCTC 58.949 57.143 0.00 0.00 0.00 3.20
2222 6307 2.360854 CCCCCTTCCCATAGTTCTCTCT 60.361 54.545 0.00 0.00 0.00 3.10
2223 6308 2.969262 CCCCTTCCCATAGTTCTCTCTC 59.031 54.545 0.00 0.00 0.00 3.20
2224 6309 2.969262 CCCTTCCCATAGTTCTCTCTCC 59.031 54.545 0.00 0.00 0.00 3.71
2225 6310 3.631087 CCCTTCCCATAGTTCTCTCTCCA 60.631 52.174 0.00 0.00 0.00 3.86
2226 6311 3.640967 CCTTCCCATAGTTCTCTCTCCAG 59.359 52.174 0.00 0.00 0.00 3.86
2227 6312 4.285863 CTTCCCATAGTTCTCTCTCCAGT 58.714 47.826 0.00 0.00 0.00 4.00
2228 6313 4.338795 TCCCATAGTTCTCTCTCCAGTT 57.661 45.455 0.00 0.00 0.00 3.16
2229 6314 4.282496 TCCCATAGTTCTCTCTCCAGTTC 58.718 47.826 0.00 0.00 0.00 3.01
2230 6315 3.386402 CCCATAGTTCTCTCTCCAGTTCC 59.614 52.174 0.00 0.00 0.00 3.62
2231 6316 4.026744 CCATAGTTCTCTCTCCAGTTCCA 58.973 47.826 0.00 0.00 0.00 3.53
2232 6317 4.653341 CCATAGTTCTCTCTCCAGTTCCAT 59.347 45.833 0.00 0.00 0.00 3.41
2233 6318 5.221422 CCATAGTTCTCTCTCCAGTTCCATC 60.221 48.000 0.00 0.00 0.00 3.51
2234 6319 4.059773 AGTTCTCTCTCCAGTTCCATCT 57.940 45.455 0.00 0.00 0.00 2.90
2235 6320 4.023291 AGTTCTCTCTCCAGTTCCATCTC 58.977 47.826 0.00 0.00 0.00 2.75
2236 6321 4.023291 GTTCTCTCTCCAGTTCCATCTCT 58.977 47.826 0.00 0.00 0.00 3.10
2237 6322 5.044476 AGTTCTCTCTCCAGTTCCATCTCTA 60.044 44.000 0.00 0.00 0.00 2.43
2238 6323 5.661503 TCTCTCTCCAGTTCCATCTCTAT 57.338 43.478 0.00 0.00 0.00 1.98
2239 6324 5.630121 TCTCTCTCCAGTTCCATCTCTATC 58.370 45.833 0.00 0.00 0.00 2.08
2240 6325 5.133491 TCTCTCTCCAGTTCCATCTCTATCA 59.867 44.000 0.00 0.00 0.00 2.15
2241 6326 5.963092 TCTCTCCAGTTCCATCTCTATCAT 58.037 41.667 0.00 0.00 0.00 2.45
2242 6327 7.018049 TCTCTCTCCAGTTCCATCTCTATCATA 59.982 40.741 0.00 0.00 0.00 2.15
2243 6328 6.945435 TCTCTCCAGTTCCATCTCTATCATAC 59.055 42.308 0.00 0.00 0.00 2.39
2244 6329 6.614657 TCTCCAGTTCCATCTCTATCATACA 58.385 40.000 0.00 0.00 0.00 2.29
2245 6330 7.244558 TCTCCAGTTCCATCTCTATCATACAT 58.755 38.462 0.00 0.00 0.00 2.29
2246 6331 7.395772 TCTCCAGTTCCATCTCTATCATACATC 59.604 40.741 0.00 0.00 0.00 3.06
2247 6332 6.438741 TCCAGTTCCATCTCTATCATACATCC 59.561 42.308 0.00 0.00 0.00 3.51
2248 6333 6.212187 CCAGTTCCATCTCTATCATACATCCA 59.788 42.308 0.00 0.00 0.00 3.41
2249 6334 7.092979 CCAGTTCCATCTCTATCATACATCCAT 60.093 40.741 0.00 0.00 0.00 3.41
2250 6335 7.764901 CAGTTCCATCTCTATCATACATCCATG 59.235 40.741 0.00 0.00 0.00 3.66
2251 6336 7.677319 AGTTCCATCTCTATCATACATCCATGA 59.323 37.037 0.00 0.00 39.20 3.07
2252 6337 7.415592 TCCATCTCTATCATACATCCATGAC 57.584 40.000 0.00 0.00 37.74 3.06
2253 6338 6.382282 TCCATCTCTATCATACATCCATGACC 59.618 42.308 0.00 0.00 37.74 4.02
2254 6339 6.155737 CCATCTCTATCATACATCCATGACCA 59.844 42.308 0.00 0.00 37.74 4.02
2266 6607 1.407437 CCATGACCACCTCCTTAGTGC 60.407 57.143 0.00 0.00 33.75 4.40
2268 6609 1.656587 TGACCACCTCCTTAGTGCAT 58.343 50.000 0.00 0.00 33.75 3.96
2274 6615 3.961408 CCACCTCCTTAGTGCATAGTAGT 59.039 47.826 0.00 0.00 33.75 2.73
2290 6631 4.826274 AGTAGTGATGCCAAGAAGCTTA 57.174 40.909 0.00 0.00 0.00 3.09
2295 6636 5.198965 AGTGATGCCAAGAAGCTTAATGAT 58.801 37.500 0.00 0.00 0.00 2.45
2301 6642 4.418392 CCAAGAAGCTTAATGATGTGTGC 58.582 43.478 0.00 0.00 0.00 4.57
2306 6647 0.027979 CTTAATGATGTGTGCCGGCG 59.972 55.000 23.90 0.00 0.00 6.46
2307 6648 1.372838 TTAATGATGTGTGCCGGCGG 61.373 55.000 24.35 24.35 0.00 6.13
2313 6654 3.419759 GTGTGCCGGCGGTAACAG 61.420 66.667 28.77 5.59 0.00 3.16
2321 6662 2.489751 GCGGTAACAGCCCATTGC 59.510 61.111 0.00 0.00 41.71 3.56
2332 6673 2.267642 CCATTGCGGACCCGAAGA 59.732 61.111 13.24 0.00 42.83 2.87
2344 6685 3.533697 CCGAAGATGGGAGGTAGGA 57.466 57.895 0.00 0.00 0.00 2.94
2351 6692 1.694696 GATGGGAGGTAGGATGTGGAC 59.305 57.143 0.00 0.00 0.00 4.02
2369 6710 1.588404 GACGTTGGAGATGTGCATACG 59.412 52.381 13.85 13.85 35.89 3.06
2373 6714 3.302675 CGTTGGAGATGTGCATACGAATG 60.303 47.826 11.35 0.00 33.56 2.67
2374 6715 3.817709 TGGAGATGTGCATACGAATGA 57.182 42.857 0.00 0.00 34.84 2.57
2375 6716 3.457234 TGGAGATGTGCATACGAATGAC 58.543 45.455 0.00 0.00 34.84 3.06
2377 6718 3.246226 GGAGATGTGCATACGAATGACAC 59.754 47.826 0.00 0.00 39.01 3.67
2391 6745 1.456296 TGACACATGCCAAGATGCTC 58.544 50.000 0.00 0.00 0.00 4.26
2400 6754 1.843368 CCAAGATGCTCACCAATGGT 58.157 50.000 0.00 0.00 35.62 3.55
2419 6773 2.293122 GGTCTTGCATGCAACTTACACA 59.707 45.455 28.80 6.65 0.00 3.72
2423 6777 5.117592 GTCTTGCATGCAACTTACACATTTC 59.882 40.000 28.80 5.14 0.00 2.17
2468 6822 7.548967 TCAACTATATCGTGTGATGTGGTTAA 58.451 34.615 4.08 0.00 42.62 2.01
2469 6823 8.201464 TCAACTATATCGTGTGATGTGGTTAAT 58.799 33.333 4.08 0.00 42.62 1.40
2470 6824 8.826710 CAACTATATCGTGTGATGTGGTTAATT 58.173 33.333 4.08 0.00 42.62 1.40
2471 6825 8.958119 ACTATATCGTGTGATGTGGTTAATTT 57.042 30.769 0.00 0.00 34.51 1.82
2472 6826 9.391006 ACTATATCGTGTGATGTGGTTAATTTT 57.609 29.630 0.00 0.00 34.51 1.82
2517 6871 8.751302 TTAATATCGCGAAGATAGCAATTACA 57.249 30.769 15.24 0.00 44.30 2.41
2518 6872 4.974103 ATCGCGAAGATAGCAATTACAC 57.026 40.909 15.24 0.00 37.93 2.90
2519 6873 3.120792 TCGCGAAGATAGCAATTACACC 58.879 45.455 6.20 0.00 34.19 4.16
2520 6874 2.863740 CGCGAAGATAGCAATTACACCA 59.136 45.455 0.00 0.00 34.19 4.17
2521 6875 3.060272 CGCGAAGATAGCAATTACACCAG 60.060 47.826 0.00 0.00 34.19 4.00
2522 6876 3.248602 GCGAAGATAGCAATTACACCAGG 59.751 47.826 0.00 0.00 34.19 4.45
2523 6877 3.248602 CGAAGATAGCAATTACACCAGGC 59.751 47.826 0.00 0.00 0.00 4.85
2524 6878 3.214696 AGATAGCAATTACACCAGGCC 57.785 47.619 0.00 0.00 0.00 5.19
2525 6879 2.780010 AGATAGCAATTACACCAGGCCT 59.220 45.455 0.00 0.00 0.00 5.19
2526 6880 2.710096 TAGCAATTACACCAGGCCTC 57.290 50.000 0.00 0.00 0.00 4.70
2527 6881 0.995024 AGCAATTACACCAGGCCTCT 59.005 50.000 0.00 0.00 0.00 3.69
2528 6882 2.196595 AGCAATTACACCAGGCCTCTA 58.803 47.619 0.00 0.00 0.00 2.43
2529 6883 2.092914 AGCAATTACACCAGGCCTCTAC 60.093 50.000 0.00 0.00 0.00 2.59
2530 6884 2.355716 GCAATTACACCAGGCCTCTACA 60.356 50.000 0.00 0.00 0.00 2.74
2531 6885 3.270877 CAATTACACCAGGCCTCTACAC 58.729 50.000 0.00 0.00 0.00 2.90
2532 6886 1.272807 TTACACCAGGCCTCTACACC 58.727 55.000 0.00 0.00 0.00 4.16
2533 6887 0.412244 TACACCAGGCCTCTACACCT 59.588 55.000 0.00 0.00 36.45 4.00
2534 6888 0.412244 ACACCAGGCCTCTACACCTA 59.588 55.000 0.00 0.00 33.38 3.08
2535 6889 0.824759 CACCAGGCCTCTACACCTAC 59.175 60.000 0.00 0.00 33.38 3.18
2536 6890 0.412244 ACCAGGCCTCTACACCTACA 59.588 55.000 0.00 0.00 33.38 2.74
2537 6891 1.203262 ACCAGGCCTCTACACCTACAA 60.203 52.381 0.00 0.00 33.38 2.41
2538 6892 1.482593 CCAGGCCTCTACACCTACAAG 59.517 57.143 0.00 0.00 33.38 3.16
2539 6893 2.457598 CAGGCCTCTACACCTACAAGA 58.542 52.381 0.00 0.00 33.38 3.02
2540 6894 3.034635 CAGGCCTCTACACCTACAAGAT 58.965 50.000 0.00 0.00 33.38 2.40
2541 6895 3.034635 AGGCCTCTACACCTACAAGATG 58.965 50.000 0.00 0.00 33.38 2.90
2542 6896 2.766828 GGCCTCTACACCTACAAGATGT 59.233 50.000 0.00 0.00 0.00 3.06
2543 6897 3.181474 GGCCTCTACACCTACAAGATGTC 60.181 52.174 0.00 0.00 0.00 3.06
2544 6898 3.489398 GCCTCTACACCTACAAGATGTCG 60.489 52.174 0.00 0.00 0.00 4.35
2545 6899 3.489398 CCTCTACACCTACAAGATGTCGC 60.489 52.174 0.00 0.00 0.00 5.19
2546 6900 3.086282 TCTACACCTACAAGATGTCGCA 58.914 45.455 0.00 0.00 0.00 5.10
2547 6901 2.831685 ACACCTACAAGATGTCGCAA 57.168 45.000 0.00 0.00 0.00 4.85
2548 6902 3.120321 ACACCTACAAGATGTCGCAAA 57.880 42.857 0.00 0.00 0.00 3.68
2549 6903 3.067106 ACACCTACAAGATGTCGCAAAG 58.933 45.455 0.00 0.00 0.00 2.77
2550 6904 3.244078 ACACCTACAAGATGTCGCAAAGA 60.244 43.478 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.392998 AGATGCTTGCCGGTACAAGG 60.393 55.000 19.52 0.00 45.83 3.61
3 4 0.392461 GGAGATGCTTGCCGGTACAA 60.392 55.000 1.90 0.00 0.00 2.41
6 7 2.016393 CTCGGAGATGCTTGCCGGTA 62.016 60.000 1.90 0.00 44.87 4.02
8 9 2.587194 CTCGGAGATGCTTGCCGG 60.587 66.667 0.00 0.00 44.87 6.13
10 11 2.899339 GCCTCGGAGATGCTTGCC 60.899 66.667 6.58 0.00 44.69 4.52
11 12 3.267860 CGCCTCGGAGATGCTTGC 61.268 66.667 6.58 0.00 45.91 4.01
12 13 0.740868 TTTCGCCTCGGAGATGCTTG 60.741 55.000 6.58 0.00 45.91 4.01
15 16 2.529619 GCTTTCGCCTCGGAGATGC 61.530 63.158 6.58 1.14 44.65 3.91
16 17 3.711348 GCTTTCGCCTCGGAGATG 58.289 61.111 6.58 0.00 33.89 2.90
29 30 3.458189 CGATCCTACGAATCAAGGCTTT 58.542 45.455 0.00 0.00 35.09 3.51
30 31 2.224066 CCGATCCTACGAATCAAGGCTT 60.224 50.000 0.00 0.00 35.09 4.35
31 32 1.341531 CCGATCCTACGAATCAAGGCT 59.658 52.381 0.00 0.00 35.09 4.58
32 33 1.784525 CCGATCCTACGAATCAAGGC 58.215 55.000 0.00 0.00 35.09 4.35
34 35 2.128035 GTGCCGATCCTACGAATCAAG 58.872 52.381 0.00 0.00 35.09 3.02
36 37 0.030235 CGTGCCGATCCTACGAATCA 59.970 55.000 5.42 0.00 40.01 2.57
37 38 0.309922 TCGTGCCGATCCTACGAATC 59.690 55.000 10.22 0.00 42.99 2.52
38 39 2.411535 TCGTGCCGATCCTACGAAT 58.588 52.632 10.22 0.00 42.99 3.34
40 41 1.652563 CATCGTGCCGATCCTACGA 59.347 57.895 13.73 13.73 45.19 3.43
41 42 1.371758 CCATCGTGCCGATCCTACG 60.372 63.158 7.06 5.08 45.19 3.51
42 43 1.664965 GCCATCGTGCCGATCCTAC 60.665 63.158 7.06 0.00 45.19 3.18
43 44 2.734591 GCCATCGTGCCGATCCTA 59.265 61.111 7.06 0.00 45.19 2.94
54 55 3.257561 CAGAAGACGCCGCCATCG 61.258 66.667 0.00 0.00 0.00 3.84
55 56 2.167861 GTCAGAAGACGCCGCCATC 61.168 63.158 0.00 0.00 34.60 3.51
56 57 2.125512 GTCAGAAGACGCCGCCAT 60.126 61.111 0.00 0.00 34.60 4.40
65 66 2.693591 ACAGAGGAACAACGTCAGAAGA 59.306 45.455 0.00 0.00 36.06 2.87
66 67 3.099267 ACAGAGGAACAACGTCAGAAG 57.901 47.619 0.00 0.00 36.06 2.85
67 68 3.194861 CAACAGAGGAACAACGTCAGAA 58.805 45.455 0.00 0.00 36.06 3.02
68 69 2.483013 CCAACAGAGGAACAACGTCAGA 60.483 50.000 0.00 0.00 36.06 3.27
70 71 1.474320 CCCAACAGAGGAACAACGTCA 60.474 52.381 0.00 0.00 36.06 4.35
71 72 1.202604 TCCCAACAGAGGAACAACGTC 60.203 52.381 0.00 0.00 0.00 4.34
72 73 0.834612 TCCCAACAGAGGAACAACGT 59.165 50.000 0.00 0.00 0.00 3.99
74 75 1.239347 GCTCCCAACAGAGGAACAAC 58.761 55.000 0.00 0.00 34.26 3.32
76 77 1.003580 GATGCTCCCAACAGAGGAACA 59.996 52.381 0.00 0.00 37.78 3.18
77 78 1.743996 GATGCTCCCAACAGAGGAAC 58.256 55.000 0.00 0.00 37.78 3.62
78 79 0.250234 CGATGCTCCCAACAGAGGAA 59.750 55.000 0.00 0.00 37.78 3.36
80 81 0.742281 CACGATGCTCCCAACAGAGG 60.742 60.000 0.00 0.00 34.26 3.69
82 83 1.375908 GCACGATGCTCCCAACAGA 60.376 57.895 0.00 0.00 40.96 3.41
83 84 3.181367 GCACGATGCTCCCAACAG 58.819 61.111 0.00 0.00 40.96 3.16
94 95 1.967066 CCTCTTATCTCCCAGCACGAT 59.033 52.381 0.00 0.00 0.00 3.73
95 96 1.403814 CCTCTTATCTCCCAGCACGA 58.596 55.000 0.00 0.00 0.00 4.35
96 97 0.249657 GCCTCTTATCTCCCAGCACG 60.250 60.000 0.00 0.00 0.00 5.34
99 100 0.766288 AGGGCCTCTTATCTCCCAGC 60.766 60.000 0.00 0.00 41.22 4.85
100 101 2.704190 TAGGGCCTCTTATCTCCCAG 57.296 55.000 10.74 0.00 41.22 4.45
101 102 2.182312 ACATAGGGCCTCTTATCTCCCA 59.818 50.000 10.74 0.00 41.22 4.37
103 104 3.558109 GCAACATAGGGCCTCTTATCTCC 60.558 52.174 10.74 0.00 0.00 3.71
105 106 2.037772 CGCAACATAGGGCCTCTTATCT 59.962 50.000 10.74 0.00 0.00 1.98
106 107 2.417719 CGCAACATAGGGCCTCTTATC 58.582 52.381 10.74 0.00 0.00 1.75
108 109 0.179056 GCGCAACATAGGGCCTCTTA 60.179 55.000 10.74 0.00 41.12 2.10
110 111 2.190578 GCGCAACATAGGGCCTCT 59.809 61.111 10.74 0.00 41.12 3.69
114 115 1.889573 GAGGAGCGCAACATAGGGC 60.890 63.158 11.47 0.00 46.61 5.19
115 116 0.531532 CAGAGGAGCGCAACATAGGG 60.532 60.000 11.47 0.00 0.00 3.53
127 128 2.584418 CGATGCACGCCAGAGGAG 60.584 66.667 0.00 0.00 34.51 3.69
138 139 4.916293 GATCCGGGCAGCGATGCA 62.916 66.667 28.61 6.97 36.33 3.96
140 141 4.592192 ACGATCCGGGCAGCGATG 62.592 66.667 7.88 0.00 0.00 3.84
141 142 3.792053 GAACGATCCGGGCAGCGAT 62.792 63.158 7.88 0.00 0.00 4.58
143 144 4.514577 AGAACGATCCGGGCAGCG 62.515 66.667 0.00 0.00 0.00 5.18
146 147 0.970937 AGAGAAGAACGATCCGGGCA 60.971 55.000 0.00 0.00 0.00 5.36
147 148 0.528684 CAGAGAAGAACGATCCGGGC 60.529 60.000 0.00 0.00 0.00 6.13
148 149 0.103208 CCAGAGAAGAACGATCCGGG 59.897 60.000 0.00 0.00 0.00 5.73
150 151 0.867753 CGCCAGAGAAGAACGATCCG 60.868 60.000 0.00 0.00 0.00 4.18
151 152 1.148759 GCGCCAGAGAAGAACGATCC 61.149 60.000 0.00 0.00 0.00 3.36
152 153 0.179124 AGCGCCAGAGAAGAACGATC 60.179 55.000 2.29 0.00 0.00 3.69
154 155 1.103803 ATAGCGCCAGAGAAGAACGA 58.896 50.000 2.29 0.00 0.00 3.85
156 157 2.301577 ACATAGCGCCAGAGAAGAAC 57.698 50.000 2.29 0.00 0.00 3.01
157 158 2.735444 CGAACATAGCGCCAGAGAAGAA 60.735 50.000 2.29 0.00 0.00 2.52
158 159 1.202302 CGAACATAGCGCCAGAGAAGA 60.202 52.381 2.29 0.00 0.00 2.87
159 160 1.203928 CGAACATAGCGCCAGAGAAG 58.796 55.000 2.29 0.00 0.00 2.85
160 161 0.179111 CCGAACATAGCGCCAGAGAA 60.179 55.000 2.29 0.00 0.00 2.87
161 162 1.320344 ACCGAACATAGCGCCAGAGA 61.320 55.000 2.29 0.00 0.00 3.10
162 163 0.872021 GACCGAACATAGCGCCAGAG 60.872 60.000 2.29 0.00 0.00 3.35
164 165 2.230940 CGACCGAACATAGCGCCAG 61.231 63.158 2.29 0.00 0.00 4.85
165 166 2.202690 CGACCGAACATAGCGCCA 60.203 61.111 2.29 0.00 0.00 5.69
166 167 2.202703 ACGACCGAACATAGCGCC 60.203 61.111 2.29 0.00 0.00 6.53
167 168 2.565394 CGACGACCGAACATAGCGC 61.565 63.158 0.00 0.00 41.76 5.92
168 169 2.565394 GCGACGACCGAACATAGCG 61.565 63.158 0.00 0.00 41.76 4.26
169 170 1.226603 AGCGACGACCGAACATAGC 60.227 57.895 0.00 0.00 41.76 2.97
170 171 0.866061 CCAGCGACGACCGAACATAG 60.866 60.000 0.00 0.00 41.76 2.23
171 172 1.138036 CCAGCGACGACCGAACATA 59.862 57.895 0.00 0.00 41.76 2.29
174 175 4.719369 AGCCAGCGACGACCGAAC 62.719 66.667 0.00 0.00 41.76 3.95
175 176 4.415332 GAGCCAGCGACGACCGAA 62.415 66.667 0.00 0.00 41.76 4.30
176 177 3.963687 TAGAGCCAGCGACGACCGA 62.964 63.158 0.00 0.00 41.76 4.69
177 178 3.506096 TAGAGCCAGCGACGACCG 61.506 66.667 0.00 0.00 42.21 4.79
178 179 2.102553 GTAGAGCCAGCGACGACC 59.897 66.667 0.00 0.00 0.00 4.79
179 180 2.102553 GGTAGAGCCAGCGACGAC 59.897 66.667 0.00 0.00 37.17 4.34
180 181 2.360726 TGGTAGAGCCAGCGACGA 60.361 61.111 0.00 0.00 43.61 4.20
189 190 0.905357 TCCAGCTTCCTTGGTAGAGC 59.095 55.000 0.00 1.82 37.02 4.09
190 191 2.183679 ACTCCAGCTTCCTTGGTAGAG 58.816 52.381 0.00 0.00 37.02 2.43
191 192 2.303022 CAACTCCAGCTTCCTTGGTAGA 59.697 50.000 0.00 0.00 37.02 2.59
192 193 2.704572 CAACTCCAGCTTCCTTGGTAG 58.295 52.381 0.00 0.00 37.02 3.18
193 194 1.271379 GCAACTCCAGCTTCCTTGGTA 60.271 52.381 0.00 0.00 37.02 3.25
195 196 0.251077 AGCAACTCCAGCTTCCTTGG 60.251 55.000 0.00 0.00 39.87 3.61
196 197 0.879765 CAGCAACTCCAGCTTCCTTG 59.120 55.000 0.00 0.00 41.14 3.61
197 198 0.475906 ACAGCAACTCCAGCTTCCTT 59.524 50.000 0.00 0.00 41.14 3.36
200 201 1.889545 AGAACAGCAACTCCAGCTTC 58.110 50.000 0.00 0.00 41.14 3.86
201 202 2.225467 GAAGAACAGCAACTCCAGCTT 58.775 47.619 0.00 0.00 41.14 3.74
202 203 1.875576 CGAAGAACAGCAACTCCAGCT 60.876 52.381 0.00 0.00 44.62 4.24
203 204 0.514691 CGAAGAACAGCAACTCCAGC 59.485 55.000 0.00 0.00 0.00 4.85
204 205 1.151668 CCGAAGAACAGCAACTCCAG 58.848 55.000 0.00 0.00 0.00 3.86
205 206 0.468226 ACCGAAGAACAGCAACTCCA 59.532 50.000 0.00 0.00 0.00 3.86
208 209 2.224281 TGATCACCGAAGAACAGCAACT 60.224 45.455 0.00 0.00 0.00 3.16
209 210 2.096218 GTGATCACCGAAGAACAGCAAC 60.096 50.000 15.31 0.00 0.00 4.17
210 211 2.143122 GTGATCACCGAAGAACAGCAA 58.857 47.619 15.31 0.00 0.00 3.91
211 212 1.608025 GGTGATCACCGAAGAACAGCA 60.608 52.381 28.52 0.00 42.29 4.41
212 213 1.079503 GGTGATCACCGAAGAACAGC 58.920 55.000 28.52 2.41 42.29 4.40
242 243 3.882835 GATAGCCTCGCCGCGTCTC 62.883 68.421 13.39 2.90 0.00 3.36
243 244 3.967335 GATAGCCTCGCCGCGTCT 61.967 66.667 13.39 10.81 0.00 4.18
250 251 1.887707 CCCAAACCGATAGCCTCGC 60.888 63.158 0.92 0.00 46.25 5.03
252 253 1.070289 CCTACCCAAACCGATAGCCTC 59.930 57.143 0.00 0.00 0.00 4.70
253 254 1.129058 CCTACCCAAACCGATAGCCT 58.871 55.000 0.00 0.00 0.00 4.58
254 255 0.534427 GCCTACCCAAACCGATAGCC 60.534 60.000 0.00 0.00 0.00 3.93
255 256 0.468648 AGCCTACCCAAACCGATAGC 59.531 55.000 0.00 0.00 0.00 2.97
256 257 2.040178 AGAGCCTACCCAAACCGATAG 58.960 52.381 0.00 0.00 0.00 2.08
258 259 1.065418 CAAGAGCCTACCCAAACCGAT 60.065 52.381 0.00 0.00 0.00 4.18
259 260 0.323629 CAAGAGCCTACCCAAACCGA 59.676 55.000 0.00 0.00 0.00 4.69
260 261 0.036306 ACAAGAGCCTACCCAAACCG 59.964 55.000 0.00 0.00 0.00 4.44
261 262 3.279434 CATACAAGAGCCTACCCAAACC 58.721 50.000 0.00 0.00 0.00 3.27
262 263 3.939592 GACATACAAGAGCCTACCCAAAC 59.060 47.826 0.00 0.00 0.00 2.93
263 264 3.369052 CGACATACAAGAGCCTACCCAAA 60.369 47.826 0.00 0.00 0.00 3.28
264 265 2.167693 CGACATACAAGAGCCTACCCAA 59.832 50.000 0.00 0.00 0.00 4.12
265 266 1.754803 CGACATACAAGAGCCTACCCA 59.245 52.381 0.00 0.00 0.00 4.51
266 267 1.755380 ACGACATACAAGAGCCTACCC 59.245 52.381 0.00 0.00 0.00 3.69
267 268 3.631227 ACTACGACATACAAGAGCCTACC 59.369 47.826 0.00 0.00 0.00 3.18
268 269 4.897025 ACTACGACATACAAGAGCCTAC 57.103 45.455 0.00 0.00 0.00 3.18
270 271 3.510360 ACAACTACGACATACAAGAGCCT 59.490 43.478 0.00 0.00 0.00 4.58
271 272 3.612860 CACAACTACGACATACAAGAGCC 59.387 47.826 0.00 0.00 0.00 4.70
272 273 4.235360 ACACAACTACGACATACAAGAGC 58.765 43.478 0.00 0.00 0.00 4.09
273 274 6.609533 ACTACACAACTACGACATACAAGAG 58.390 40.000 0.00 0.00 0.00 2.85
274 275 6.564709 ACTACACAACTACGACATACAAGA 57.435 37.500 0.00 0.00 0.00 3.02
275 276 5.507180 CGACTACACAACTACGACATACAAG 59.493 44.000 0.00 0.00 0.00 3.16
276 277 5.049474 ACGACTACACAACTACGACATACAA 60.049 40.000 0.00 0.00 0.00 2.41
277 278 4.452114 ACGACTACACAACTACGACATACA 59.548 41.667 0.00 0.00 0.00 2.29
278 279 4.785055 CACGACTACACAACTACGACATAC 59.215 45.833 0.00 0.00 0.00 2.39
279 280 4.452114 ACACGACTACACAACTACGACATA 59.548 41.667 0.00 0.00 0.00 2.29
280 281 3.251729 ACACGACTACACAACTACGACAT 59.748 43.478 0.00 0.00 0.00 3.06
281 282 2.613595 ACACGACTACACAACTACGACA 59.386 45.455 0.00 0.00 0.00 4.35
282 283 2.969306 CACACGACTACACAACTACGAC 59.031 50.000 0.00 0.00 0.00 4.34
283 284 2.613595 ACACACGACTACACAACTACGA 59.386 45.455 0.00 0.00 0.00 3.43
284 285 2.990941 ACACACGACTACACAACTACG 58.009 47.619 0.00 0.00 0.00 3.51
285 286 4.107622 ACAACACACGACTACACAACTAC 58.892 43.478 0.00 0.00 0.00 2.73
286 287 4.374843 ACAACACACGACTACACAACTA 57.625 40.909 0.00 0.00 0.00 2.24
287 288 3.241067 ACAACACACGACTACACAACT 57.759 42.857 0.00 0.00 0.00 3.16
288 289 3.123959 ACAACAACACACGACTACACAAC 59.876 43.478 0.00 0.00 0.00 3.32
289 290 3.327626 ACAACAACACACGACTACACAA 58.672 40.909 0.00 0.00 0.00 3.33
290 291 2.924926 GACAACAACACACGACTACACA 59.075 45.455 0.00 0.00 0.00 3.72
291 292 3.184541 AGACAACAACACACGACTACAC 58.815 45.455 0.00 0.00 0.00 2.90
292 293 3.513680 AGACAACAACACACGACTACA 57.486 42.857 0.00 0.00 0.00 2.74
293 294 4.092383 ACAAAGACAACAACACACGACTAC 59.908 41.667 0.00 0.00 0.00 2.73
294 295 4.247258 ACAAAGACAACAACACACGACTA 58.753 39.130 0.00 0.00 0.00 2.59
295 296 3.071479 ACAAAGACAACAACACACGACT 58.929 40.909 0.00 0.00 0.00 4.18
296 297 3.465122 ACAAAGACAACAACACACGAC 57.535 42.857 0.00 0.00 0.00 4.34
297 298 4.632251 ACATACAAAGACAACAACACACGA 59.368 37.500 0.00 0.00 0.00 4.35
298 299 4.728131 CACATACAAAGACAACAACACACG 59.272 41.667 0.00 0.00 0.00 4.49
299 300 5.636837 ACACATACAAAGACAACAACACAC 58.363 37.500 0.00 0.00 0.00 3.82
302 303 5.065859 CCTGACACATACAAAGACAACAACA 59.934 40.000 0.00 0.00 0.00 3.33
303 304 5.065988 ACCTGACACATACAAAGACAACAAC 59.934 40.000 0.00 0.00 0.00 3.32
305 306 4.574421 CACCTGACACATACAAAGACAACA 59.426 41.667 0.00 0.00 0.00 3.33
308 309 4.126437 CACACCTGACACATACAAAGACA 58.874 43.478 0.00 0.00 0.00 3.41
311 312 3.738982 TCCACACCTGACACATACAAAG 58.261 45.455 0.00 0.00 0.00 2.77
312 313 3.135712 ACTCCACACCTGACACATACAAA 59.864 43.478 0.00 0.00 0.00 2.83
315 316 3.067106 CAACTCCACACCTGACACATAC 58.933 50.000 0.00 0.00 0.00 2.39
316 317 2.703536 ACAACTCCACACCTGACACATA 59.296 45.455 0.00 0.00 0.00 2.29
317 318 1.490490 ACAACTCCACACCTGACACAT 59.510 47.619 0.00 0.00 0.00 3.21
318 319 0.908910 ACAACTCCACACCTGACACA 59.091 50.000 0.00 0.00 0.00 3.72
319 320 1.299541 CACAACTCCACACCTGACAC 58.700 55.000 0.00 0.00 0.00 3.67
321 322 0.179045 AGCACAACTCCACACCTGAC 60.179 55.000 0.00 0.00 0.00 3.51
322 323 1.070134 GTAGCACAACTCCACACCTGA 59.930 52.381 0.00 0.00 0.00 3.86
323 324 1.512926 GTAGCACAACTCCACACCTG 58.487 55.000 0.00 0.00 0.00 4.00
324 325 0.033504 CGTAGCACAACTCCACACCT 59.966 55.000 0.00 0.00 0.00 4.00
325 326 2.528797 CGTAGCACAACTCCACACC 58.471 57.895 0.00 0.00 0.00 4.16
340 341 1.272784 CGCTGTGAACAACGAGCGTA 61.273 55.000 0.00 0.00 44.36 4.42
341 342 2.585869 CGCTGTGAACAACGAGCGT 61.586 57.895 0.00 0.00 44.36 5.07
342 343 2.168621 CGCTGTGAACAACGAGCG 59.831 61.111 0.00 0.00 44.17 5.03
345 346 0.318699 CCTCTCGCTGTGAACAACGA 60.319 55.000 8.48 8.48 41.43 3.85
346 347 0.597637 ACCTCTCGCTGTGAACAACG 60.598 55.000 0.00 0.00 36.84 4.10
348 349 2.235891 TCTACCTCTCGCTGTGAACAA 58.764 47.619 0.00 0.00 0.00 2.83
350 351 2.164624 ACATCTACCTCTCGCTGTGAAC 59.835 50.000 0.00 0.00 0.00 3.18
351 352 2.164422 CACATCTACCTCTCGCTGTGAA 59.836 50.000 0.00 0.00 36.89 3.18
352 353 1.745653 CACATCTACCTCTCGCTGTGA 59.254 52.381 0.00 0.00 36.89 3.58
353 354 1.202348 CCACATCTACCTCTCGCTGTG 60.202 57.143 0.00 0.00 35.06 3.66
354 355 1.107114 CCACATCTACCTCTCGCTGT 58.893 55.000 0.00 0.00 0.00 4.40
355 356 1.107114 ACCACATCTACCTCTCGCTG 58.893 55.000 0.00 0.00 0.00 5.18
356 357 1.478510 CAACCACATCTACCTCTCGCT 59.521 52.381 0.00 0.00 0.00 4.93
357 358 1.204941 ACAACCACATCTACCTCTCGC 59.795 52.381 0.00 0.00 0.00 5.03
359 360 5.361285 AGTCATACAACCACATCTACCTCTC 59.639 44.000 0.00 0.00 0.00 3.20
360 361 5.273208 AGTCATACAACCACATCTACCTCT 58.727 41.667 0.00 0.00 0.00 3.69
362 363 8.958060 ATATAGTCATACAACCACATCTACCT 57.042 34.615 0.00 0.00 0.00 3.08
367 368 9.988815 AGAGAAATATAGTCATACAACCACATC 57.011 33.333 0.00 0.00 0.00 3.06
368 369 9.988815 GAGAGAAATATAGTCATACAACCACAT 57.011 33.333 0.00 0.00 0.00 3.21
369 370 8.421784 GGAGAGAAATATAGTCATACAACCACA 58.578 37.037 0.00 0.00 0.00 4.17
370 371 8.643324 AGGAGAGAAATATAGTCATACAACCAC 58.357 37.037 0.00 0.00 0.00 4.16
371 372 8.783660 AGGAGAGAAATATAGTCATACAACCA 57.216 34.615 0.00 0.00 0.00 3.67
372 373 9.699703 GAAGGAGAGAAATATAGTCATACAACC 57.300 37.037 0.00 0.00 0.00 3.77
388 389 9.134055 GTACCTTAGCTTTATAGAAGGAGAGAA 57.866 37.037 16.00 0.00 40.88 2.87
390 391 7.586747 CGTACCTTAGCTTTATAGAAGGAGAG 58.413 42.308 16.00 4.39 40.88 3.20
391 392 6.016443 GCGTACCTTAGCTTTATAGAAGGAGA 60.016 42.308 16.00 2.72 40.88 3.71
392 393 6.151004 GCGTACCTTAGCTTTATAGAAGGAG 58.849 44.000 16.00 8.69 40.88 3.69
393 394 5.595542 TGCGTACCTTAGCTTTATAGAAGGA 59.404 40.000 16.00 0.00 40.88 3.36
394 395 5.839621 TGCGTACCTTAGCTTTATAGAAGG 58.160 41.667 8.83 8.83 43.49 3.46
395 396 7.948278 ATTGCGTACCTTAGCTTTATAGAAG 57.052 36.000 0.00 0.00 0.00 2.85
396 397 8.609176 CAAATTGCGTACCTTAGCTTTATAGAA 58.391 33.333 0.00 0.00 0.00 2.10
398 399 6.851330 GCAAATTGCGTACCTTAGCTTTATAG 59.149 38.462 0.90 0.00 31.71 1.31
399 400 6.721321 GCAAATTGCGTACCTTAGCTTTATA 58.279 36.000 0.90 0.00 31.71 0.98
401 402 4.976987 GCAAATTGCGTACCTTAGCTTTA 58.023 39.130 0.90 0.00 31.71 1.85
402 403 3.833442 GCAAATTGCGTACCTTAGCTTT 58.167 40.909 0.90 0.00 31.71 3.51
415 416 3.449322 TTTCGAGAGTACGCAAATTGC 57.551 42.857 8.09 8.09 40.69 3.56
742 3450 3.535561 AGAACTCTTGGAATATGCGGTG 58.464 45.455 0.00 0.00 0.00 4.94
745 3453 4.034510 GGTGAAGAACTCTTGGAATATGCG 59.965 45.833 0.00 0.00 36.11 4.73
750 3458 5.053978 ACTTGGTGAAGAACTCTTGGAAT 57.946 39.130 0.00 0.00 36.11 3.01
790 3498 9.631452 TGTTGCATCTCTATCTATAATCTTTCG 57.369 33.333 0.00 0.00 0.00 3.46
916 3630 4.574828 GCCGGATAATACAGTTTGACACAT 59.425 41.667 5.05 0.00 0.00 3.21
1023 4459 3.873952 GCTATGTTTTTGTTGTTGGCCAA 59.126 39.130 16.05 16.05 0.00 4.52
1150 4600 2.241176 TGTACAAGGATTCCCATGACCC 59.759 50.000 11.87 0.00 34.88 4.46
1168 4618 2.136728 CAAACCGACCATTCACGTGTA 58.863 47.619 16.51 6.35 0.00 2.90
1279 4735 4.460263 TGGCATGGTATGATGTTAGGAAC 58.540 43.478 0.00 0.00 0.00 3.62
1308 4766 1.292223 GGAAGTAGTCGGCTGCACA 59.708 57.895 8.12 0.00 0.00 4.57
1317 4775 2.152016 GCAACACTTGGGGAAGTAGTC 58.848 52.381 0.00 0.00 0.00 2.59
1534 5440 8.788806 TGAGCTTTATTTTTGGAGAAACGATTA 58.211 29.630 0.00 0.00 0.00 1.75
1565 5472 0.530744 TACGGTGACAGTGCTCATCC 59.469 55.000 0.00 0.00 0.00 3.51
1574 5481 1.529438 ACGCACAAAATACGGTGACAG 59.471 47.619 0.00 0.00 37.18 3.51
1584 5491 1.067915 GGCCACATGTACGCACAAAAT 60.068 47.619 16.47 0.00 38.42 1.82
1621 5528 5.447144 GCGACTGACAACAATGTATGCATTA 60.447 40.000 3.54 0.00 42.91 1.90
1632 5539 1.947146 CGACGGCGACTGACAACAA 60.947 57.895 16.62 0.00 40.82 2.83
1640 5547 0.108804 ATGATGAAACGACGGCGACT 60.109 50.000 22.49 2.22 41.64 4.18
1791 5699 2.093783 CCCTAAGAAAATCGCGTGACAC 59.906 50.000 5.77 0.00 0.00 3.67
1835 5906 8.807948 ATAAGCATTCTAAGTAGGCAGAAAAA 57.192 30.769 0.00 0.00 34.61 1.94
1880 5952 4.023707 CAGCCACAAAGTTTGACTTCTAGG 60.024 45.833 22.23 11.62 37.47 3.02
1934 6019 2.101750 ACATTGTGACCACGAGTGTACA 59.898 45.455 0.00 0.00 0.00 2.90
1939 6024 2.626266 TGTAGACATTGTGACCACGAGT 59.374 45.455 0.00 0.00 0.00 4.18
2065 6150 2.164338 TGGGATTAACCGAACAAAGCC 58.836 47.619 0.00 0.00 40.11 4.35
2075 6160 7.122585 AATCCACCTAGGGTTGGGATTAACC 62.123 48.000 25.50 0.00 42.74 2.85
2076 6161 2.848071 TCCACCTAGGGTTGGGATTAAC 59.152 50.000 14.81 0.00 38.24 2.01
2077 6162 3.223940 TCCACCTAGGGTTGGGATTAA 57.776 47.619 14.81 0.00 38.24 1.40
2078 6163 2.974285 TCCACCTAGGGTTGGGATTA 57.026 50.000 14.81 0.00 38.24 1.75
2079 6164 2.303660 ATCCACCTAGGGTTGGGATT 57.696 50.000 14.81 0.00 35.72 3.01
2080 6165 2.303660 AATCCACCTAGGGTTGGGAT 57.696 50.000 14.81 15.83 39.99 3.85
2081 6166 3.849826 AATCCACCTAGGGTTGGGA 57.150 52.632 14.81 14.25 39.99 4.37
2085 6170 1.596496 CCTCCAATCCACCTAGGGTT 58.404 55.000 14.81 0.00 43.21 4.11
2086 6171 0.327576 CCCTCCAATCCACCTAGGGT 60.328 60.000 14.81 0.00 41.76 4.34
2087 6172 1.062488 CCCCTCCAATCCACCTAGGG 61.062 65.000 14.81 1.73 45.57 3.53
2088 6173 0.030092 TCCCCTCCAATCCACCTAGG 60.030 60.000 7.41 7.41 39.47 3.02
2089 6174 2.124560 ATCCCCTCCAATCCACCTAG 57.875 55.000 0.00 0.00 0.00 3.02
2090 6175 2.513738 CAAATCCCCTCCAATCCACCTA 59.486 50.000 0.00 0.00 0.00 3.08
2091 6176 1.288932 CAAATCCCCTCCAATCCACCT 59.711 52.381 0.00 0.00 0.00 4.00
2092 6177 1.780503 CAAATCCCCTCCAATCCACC 58.219 55.000 0.00 0.00 0.00 4.61
2093 6178 1.114627 GCAAATCCCCTCCAATCCAC 58.885 55.000 0.00 0.00 0.00 4.02
2094 6179 0.709397 TGCAAATCCCCTCCAATCCA 59.291 50.000 0.00 0.00 0.00 3.41
2095 6180 1.406903 CTGCAAATCCCCTCCAATCC 58.593 55.000 0.00 0.00 0.00 3.01
2096 6181 1.406903 CCTGCAAATCCCCTCCAATC 58.593 55.000 0.00 0.00 0.00 2.67
2097 6182 0.031817 CCCTGCAAATCCCCTCCAAT 60.032 55.000 0.00 0.00 0.00 3.16
2098 6183 1.145900 TCCCTGCAAATCCCCTCCAA 61.146 55.000 0.00 0.00 0.00 3.53
2099 6184 0.925720 ATCCCTGCAAATCCCCTCCA 60.926 55.000 0.00 0.00 0.00 3.86
2100 6185 0.262876 AATCCCTGCAAATCCCCTCC 59.737 55.000 0.00 0.00 0.00 4.30
2101 6186 2.165357 AAATCCCTGCAAATCCCCTC 57.835 50.000 0.00 0.00 0.00 4.30
2102 6187 2.190538 CAAAATCCCTGCAAATCCCCT 58.809 47.619 0.00 0.00 0.00 4.79
2103 6188 1.210234 CCAAAATCCCTGCAAATCCCC 59.790 52.381 0.00 0.00 0.00 4.81
2104 6189 1.407299 GCCAAAATCCCTGCAAATCCC 60.407 52.381 0.00 0.00 0.00 3.85
2105 6190 1.556451 AGCCAAAATCCCTGCAAATCC 59.444 47.619 0.00 0.00 0.00 3.01
2106 6191 3.004862 CAAGCCAAAATCCCTGCAAATC 58.995 45.455 0.00 0.00 0.00 2.17
2107 6192 2.876892 GCAAGCCAAAATCCCTGCAAAT 60.877 45.455 0.00 0.00 0.00 2.32
2108 6193 1.542987 GCAAGCCAAAATCCCTGCAAA 60.543 47.619 0.00 0.00 0.00 3.68
2109 6194 0.035176 GCAAGCCAAAATCCCTGCAA 59.965 50.000 0.00 0.00 0.00 4.08
2110 6195 1.120184 TGCAAGCCAAAATCCCTGCA 61.120 50.000 0.00 0.00 0.00 4.41
2111 6196 0.390735 CTGCAAGCCAAAATCCCTGC 60.391 55.000 0.00 0.00 0.00 4.85
2112 6197 0.248289 CCTGCAAGCCAAAATCCCTG 59.752 55.000 0.00 0.00 0.00 4.45
2113 6198 0.906282 CCCTGCAAGCCAAAATCCCT 60.906 55.000 0.00 0.00 0.00 4.20
2114 6199 1.598517 CCCTGCAAGCCAAAATCCC 59.401 57.895 0.00 0.00 0.00 3.85
2115 6200 0.904394 TCCCCTGCAAGCCAAAATCC 60.904 55.000 0.00 0.00 0.00 3.01
2116 6201 1.197812 ATCCCCTGCAAGCCAAAATC 58.802 50.000 0.00 0.00 0.00 2.17
2117 6202 1.660242 AATCCCCTGCAAGCCAAAAT 58.340 45.000 0.00 0.00 0.00 1.82
2118 6203 2.317371 TAATCCCCTGCAAGCCAAAA 57.683 45.000 0.00 0.00 0.00 2.44
2119 6204 2.317371 TTAATCCCCTGCAAGCCAAA 57.683 45.000 0.00 0.00 0.00 3.28
2120 6205 2.548464 ATTAATCCCCTGCAAGCCAA 57.452 45.000 0.00 0.00 0.00 4.52
2121 6206 2.387757 GAATTAATCCCCTGCAAGCCA 58.612 47.619 0.00 0.00 0.00 4.75
2122 6207 1.688735 GGAATTAATCCCCTGCAAGCC 59.311 52.381 0.00 0.00 43.00 4.35
2133 6218 3.402708 AGGGGATTGGGGAGGAATTAATC 59.597 47.826 0.00 0.00 0.00 1.75
2134 6219 3.426933 AGGGGATTGGGGAGGAATTAAT 58.573 45.455 0.00 0.00 0.00 1.40
2135 6220 2.885119 AGGGGATTGGGGAGGAATTAA 58.115 47.619 0.00 0.00 0.00 1.40
2136 6221 2.624846 AGGGGATTGGGGAGGAATTA 57.375 50.000 0.00 0.00 0.00 1.40
2137 6222 1.711684 AAGGGGATTGGGGAGGAATT 58.288 50.000 0.00 0.00 0.00 2.17
2138 6223 1.711684 AAAGGGGATTGGGGAGGAAT 58.288 50.000 0.00 0.00 0.00 3.01
2139 6224 2.387007 TAAAGGGGATTGGGGAGGAA 57.613 50.000 0.00 0.00 0.00 3.36
2140 6225 2.387007 TTAAAGGGGATTGGGGAGGA 57.613 50.000 0.00 0.00 0.00 3.71
2141 6226 3.576861 GATTTAAAGGGGATTGGGGAGG 58.423 50.000 0.00 0.00 0.00 4.30
2142 6227 3.052186 TGGATTTAAAGGGGATTGGGGAG 60.052 47.826 0.00 0.00 0.00 4.30
2143 6228 2.936576 TGGATTTAAAGGGGATTGGGGA 59.063 45.455 0.00 0.00 0.00 4.81
2144 6229 3.038280 GTGGATTTAAAGGGGATTGGGG 58.962 50.000 0.00 0.00 0.00 4.96
2145 6230 3.038280 GGTGGATTTAAAGGGGATTGGG 58.962 50.000 0.00 0.00 0.00 4.12
2146 6231 3.960755 GAGGTGGATTTAAAGGGGATTGG 59.039 47.826 0.00 0.00 0.00 3.16
2147 6232 4.609301 TGAGGTGGATTTAAAGGGGATTG 58.391 43.478 0.00 0.00 0.00 2.67
2148 6233 4.965283 TGAGGTGGATTTAAAGGGGATT 57.035 40.909 0.00 0.00 0.00 3.01
2149 6234 4.572007 GGTTGAGGTGGATTTAAAGGGGAT 60.572 45.833 0.00 0.00 0.00 3.85
2150 6235 3.245479 GGTTGAGGTGGATTTAAAGGGGA 60.245 47.826 0.00 0.00 0.00 4.81
2151 6236 3.096852 GGTTGAGGTGGATTTAAAGGGG 58.903 50.000 0.00 0.00 0.00 4.79
2152 6237 2.752903 CGGTTGAGGTGGATTTAAAGGG 59.247 50.000 0.00 0.00 0.00 3.95
2153 6238 3.681593 TCGGTTGAGGTGGATTTAAAGG 58.318 45.455 0.00 0.00 0.00 3.11
2154 6239 4.517453 TGTTCGGTTGAGGTGGATTTAAAG 59.483 41.667 0.00 0.00 0.00 1.85
2155 6240 4.462133 TGTTCGGTTGAGGTGGATTTAAA 58.538 39.130 0.00 0.00 0.00 1.52
2156 6241 4.088056 TGTTCGGTTGAGGTGGATTTAA 57.912 40.909 0.00 0.00 0.00 1.52
2157 6242 3.773418 TGTTCGGTTGAGGTGGATTTA 57.227 42.857 0.00 0.00 0.00 1.40
2158 6243 2.649531 TGTTCGGTTGAGGTGGATTT 57.350 45.000 0.00 0.00 0.00 2.17
2159 6244 2.504367 CTTGTTCGGTTGAGGTGGATT 58.496 47.619 0.00 0.00 0.00 3.01
2160 6245 1.882352 GCTTGTTCGGTTGAGGTGGAT 60.882 52.381 0.00 0.00 0.00 3.41
2161 6246 0.534203 GCTTGTTCGGTTGAGGTGGA 60.534 55.000 0.00 0.00 0.00 4.02
2162 6247 1.515521 GGCTTGTTCGGTTGAGGTGG 61.516 60.000 0.00 0.00 0.00 4.61
2163 6248 1.515521 GGGCTTGTTCGGTTGAGGTG 61.516 60.000 0.00 0.00 0.00 4.00
2164 6249 1.228154 GGGCTTGTTCGGTTGAGGT 60.228 57.895 0.00 0.00 0.00 3.85
2165 6250 0.537371 AAGGGCTTGTTCGGTTGAGG 60.537 55.000 0.00 0.00 0.00 3.86
2166 6251 2.178912 TAAGGGCTTGTTCGGTTGAG 57.821 50.000 0.00 0.00 0.00 3.02
2167 6252 2.105134 TCTTAAGGGCTTGTTCGGTTGA 59.895 45.455 1.85 0.00 0.00 3.18
2168 6253 2.500229 TCTTAAGGGCTTGTTCGGTTG 58.500 47.619 1.85 0.00 0.00 3.77
2169 6254 2.943036 TCTTAAGGGCTTGTTCGGTT 57.057 45.000 1.85 0.00 0.00 4.44
2170 6255 2.552373 CCTTCTTAAGGGCTTGTTCGGT 60.552 50.000 1.85 0.00 45.27 4.69
2171 6256 2.084546 CCTTCTTAAGGGCTTGTTCGG 58.915 52.381 1.85 0.00 45.27 4.30
2206 6291 4.338795 ACTGGAGAGAGAACTATGGGAA 57.661 45.455 0.00 0.00 0.00 3.97
2207 6292 4.282496 GAACTGGAGAGAGAACTATGGGA 58.718 47.826 0.00 0.00 0.00 4.37
2210 6295 5.598005 AGATGGAACTGGAGAGAGAACTATG 59.402 44.000 0.00 0.00 0.00 2.23
2211 6296 5.776358 AGATGGAACTGGAGAGAGAACTAT 58.224 41.667 0.00 0.00 0.00 2.12
2212 6297 5.044476 AGAGATGGAACTGGAGAGAGAACTA 60.044 44.000 0.00 0.00 0.00 2.24
2213 6298 4.023291 GAGATGGAACTGGAGAGAGAACT 58.977 47.826 0.00 0.00 0.00 3.01
2214 6299 4.023291 AGAGATGGAACTGGAGAGAGAAC 58.977 47.826 0.00 0.00 0.00 3.01
2215 6300 4.329638 AGAGATGGAACTGGAGAGAGAA 57.670 45.455 0.00 0.00 0.00 2.87
2216 6301 5.133491 TGATAGAGATGGAACTGGAGAGAGA 59.867 44.000 0.00 0.00 0.00 3.10
2217 6302 5.384336 TGATAGAGATGGAACTGGAGAGAG 58.616 45.833 0.00 0.00 0.00 3.20
2218 6303 5.394562 TGATAGAGATGGAACTGGAGAGA 57.605 43.478 0.00 0.00 0.00 3.10
2219 6304 6.718912 TGTATGATAGAGATGGAACTGGAGAG 59.281 42.308 0.00 0.00 0.00 3.20
2220 6305 6.614657 TGTATGATAGAGATGGAACTGGAGA 58.385 40.000 0.00 0.00 0.00 3.71
2221 6306 6.907853 TGTATGATAGAGATGGAACTGGAG 57.092 41.667 0.00 0.00 0.00 3.86
2222 6307 6.438741 GGATGTATGATAGAGATGGAACTGGA 59.561 42.308 0.00 0.00 0.00 3.86
2223 6308 6.212187 TGGATGTATGATAGAGATGGAACTGG 59.788 42.308 0.00 0.00 0.00 4.00
2224 6309 7.237209 TGGATGTATGATAGAGATGGAACTG 57.763 40.000 0.00 0.00 0.00 3.16
2225 6310 7.677319 TCATGGATGTATGATAGAGATGGAACT 59.323 37.037 0.00 0.00 32.39 3.01
2226 6311 7.763528 GTCATGGATGTATGATAGAGATGGAAC 59.236 40.741 0.00 0.00 39.13 3.62
2227 6312 7.093156 GGTCATGGATGTATGATAGAGATGGAA 60.093 40.741 0.00 0.00 39.13 3.53
2228 6313 6.382282 GGTCATGGATGTATGATAGAGATGGA 59.618 42.308 0.00 0.00 39.13 3.41
2229 6314 6.155737 TGGTCATGGATGTATGATAGAGATGG 59.844 42.308 0.00 0.00 39.13 3.51
2230 6315 7.040494 GTGGTCATGGATGTATGATAGAGATG 58.960 42.308 0.00 0.00 39.13 2.90
2231 6316 6.155910 GGTGGTCATGGATGTATGATAGAGAT 59.844 42.308 0.00 0.00 39.13 2.75
2232 6317 5.481824 GGTGGTCATGGATGTATGATAGAGA 59.518 44.000 0.00 0.00 39.13 3.10
2233 6318 5.483231 AGGTGGTCATGGATGTATGATAGAG 59.517 44.000 0.00 0.00 39.13 2.43
2234 6319 5.406163 AGGTGGTCATGGATGTATGATAGA 58.594 41.667 0.00 0.00 39.13 1.98
2235 6320 5.337894 GGAGGTGGTCATGGATGTATGATAG 60.338 48.000 0.00 0.00 39.13 2.08
2236 6321 4.532126 GGAGGTGGTCATGGATGTATGATA 59.468 45.833 0.00 0.00 39.13 2.15
2237 6322 3.328931 GGAGGTGGTCATGGATGTATGAT 59.671 47.826 0.00 0.00 39.13 2.45
2238 6323 2.705658 GGAGGTGGTCATGGATGTATGA 59.294 50.000 0.00 0.00 34.83 2.15
2239 6324 2.707791 AGGAGGTGGTCATGGATGTATG 59.292 50.000 0.00 0.00 0.00 2.39
2240 6325 3.066208 AGGAGGTGGTCATGGATGTAT 57.934 47.619 0.00 0.00 0.00 2.29
2241 6326 2.568546 AGGAGGTGGTCATGGATGTA 57.431 50.000 0.00 0.00 0.00 2.29
2242 6327 1.673767 AAGGAGGTGGTCATGGATGT 58.326 50.000 0.00 0.00 0.00 3.06
2243 6328 2.774234 ACTAAGGAGGTGGTCATGGATG 59.226 50.000 0.00 0.00 0.00 3.51
2244 6329 2.774234 CACTAAGGAGGTGGTCATGGAT 59.226 50.000 0.00 0.00 0.00 3.41
2245 6330 2.187958 CACTAAGGAGGTGGTCATGGA 58.812 52.381 0.00 0.00 0.00 3.41
2246 6331 1.407437 GCACTAAGGAGGTGGTCATGG 60.407 57.143 0.00 0.00 35.47 3.66
2247 6332 1.278985 TGCACTAAGGAGGTGGTCATG 59.721 52.381 0.00 0.00 35.47 3.07
2248 6333 1.656587 TGCACTAAGGAGGTGGTCAT 58.343 50.000 0.00 0.00 35.47 3.06
2249 6334 1.656587 ATGCACTAAGGAGGTGGTCA 58.343 50.000 0.00 0.00 35.47 4.02
2250 6335 2.766828 ACTATGCACTAAGGAGGTGGTC 59.233 50.000 0.00 0.00 35.47 4.02
2251 6336 2.834113 ACTATGCACTAAGGAGGTGGT 58.166 47.619 0.00 0.00 35.47 4.16
2252 6337 3.961408 ACTACTATGCACTAAGGAGGTGG 59.039 47.826 9.07 0.00 35.47 4.61
2253 6338 4.645136 TCACTACTATGCACTAAGGAGGTG 59.355 45.833 9.07 8.27 37.70 4.00
2254 6339 4.868268 TCACTACTATGCACTAAGGAGGT 58.132 43.478 9.07 0.00 0.00 3.85
2266 6607 4.701765 AGCTTCTTGGCATCACTACTATG 58.298 43.478 0.00 0.00 34.17 2.23
2268 6609 4.826274 AAGCTTCTTGGCATCACTACTA 57.174 40.909 0.00 0.00 34.17 1.82
2274 6615 4.951715 ACATCATTAAGCTTCTTGGCATCA 59.048 37.500 0.00 0.00 34.17 3.07
2280 6621 4.418392 GGCACACATCATTAAGCTTCTTG 58.582 43.478 0.00 1.76 0.00 3.02
2290 6631 2.529454 TACCGCCGGCACACATCATT 62.529 55.000 28.98 1.03 0.00 2.57
2295 6636 4.237207 TGTTACCGCCGGCACACA 62.237 61.111 28.98 19.17 0.00 3.72
2306 6647 1.377987 TCCGCAATGGGCTGTTACC 60.378 57.895 0.00 0.00 41.67 2.85
2307 6648 1.654023 GGTCCGCAATGGGCTGTTAC 61.654 60.000 0.00 0.00 44.07 2.50
2319 6660 3.781307 CCCATCTTCGGGTCCGCA 61.781 66.667 4.27 0.00 41.83 5.69
2332 6673 1.807814 GTCCACATCCTACCTCCCAT 58.192 55.000 0.00 0.00 0.00 4.00
2344 6685 1.945819 GCACATCTCCAACGTCCACAT 60.946 52.381 0.00 0.00 0.00 3.21
2351 6692 1.921243 TCGTATGCACATCTCCAACG 58.079 50.000 0.00 0.00 0.00 4.10
2369 6710 2.426024 AGCATCTTGGCATGTGTCATTC 59.574 45.455 0.00 0.00 35.83 2.67
2373 6714 1.131883 GTGAGCATCTTGGCATGTGTC 59.868 52.381 0.00 0.00 34.92 3.67
2374 6715 1.171308 GTGAGCATCTTGGCATGTGT 58.829 50.000 0.00 0.00 34.92 3.72
2375 6716 0.454600 GGTGAGCATCTTGGCATGTG 59.545 55.000 0.00 0.40 34.92 3.21
2377 6718 1.179152 TTGGTGAGCATCTTGGCATG 58.821 50.000 0.00 0.00 34.92 4.06
2391 6745 0.604073 TGCATGCAAGACCATTGGTG 59.396 50.000 20.30 0.00 35.25 4.17
2400 6754 4.852134 AATGTGTAAGTTGCATGCAAGA 57.148 36.364 32.64 18.19 36.52 3.02
2419 6773 8.727149 TGAGAGATGATATTTACCCAAGGAAAT 58.273 33.333 0.00 0.00 0.00 2.17
2423 6777 7.512992 AGTTGAGAGATGATATTTACCCAAGG 58.487 38.462 0.00 0.00 0.00 3.61
2491 6845 9.366216 TGTAATTGCTATCTTCGCGATATTAAT 57.634 29.630 10.88 6.36 34.23 1.40
2492 6846 8.644619 GTGTAATTGCTATCTTCGCGATATTAA 58.355 33.333 10.88 4.38 34.23 1.40
2493 6847 7.274904 GGTGTAATTGCTATCTTCGCGATATTA 59.725 37.037 10.88 0.63 34.23 0.98
2494 6848 6.090898 GGTGTAATTGCTATCTTCGCGATATT 59.909 38.462 10.88 0.00 34.23 1.28
2495 6849 5.577164 GGTGTAATTGCTATCTTCGCGATAT 59.423 40.000 10.88 9.80 34.23 1.63
2496 6850 4.921515 GGTGTAATTGCTATCTTCGCGATA 59.078 41.667 10.88 0.85 33.48 2.92
2497 6851 3.741344 GGTGTAATTGCTATCTTCGCGAT 59.259 43.478 10.88 0.00 36.11 4.58
2498 6852 3.120792 GGTGTAATTGCTATCTTCGCGA 58.879 45.455 3.71 3.71 0.00 5.87
2499 6853 2.863740 TGGTGTAATTGCTATCTTCGCG 59.136 45.455 0.00 0.00 0.00 5.87
2500 6854 3.248602 CCTGGTGTAATTGCTATCTTCGC 59.751 47.826 0.00 0.00 0.00 4.70
2501 6855 3.248602 GCCTGGTGTAATTGCTATCTTCG 59.751 47.826 0.00 0.00 0.00 3.79
2502 6856 3.565902 GGCCTGGTGTAATTGCTATCTTC 59.434 47.826 0.00 0.00 0.00 2.87
2503 6857 3.203040 AGGCCTGGTGTAATTGCTATCTT 59.797 43.478 3.11 0.00 0.00 2.40
2504 6858 2.780010 AGGCCTGGTGTAATTGCTATCT 59.220 45.455 3.11 0.00 0.00 1.98
2505 6859 3.142174 GAGGCCTGGTGTAATTGCTATC 58.858 50.000 12.00 0.00 0.00 2.08
2506 6860 2.780010 AGAGGCCTGGTGTAATTGCTAT 59.220 45.455 12.00 0.00 0.00 2.97
2507 6861 2.196595 AGAGGCCTGGTGTAATTGCTA 58.803 47.619 12.00 0.00 0.00 3.49
2508 6862 0.995024 AGAGGCCTGGTGTAATTGCT 59.005 50.000 12.00 0.00 0.00 3.91
2509 6863 2.289565 GTAGAGGCCTGGTGTAATTGC 58.710 52.381 12.00 0.00 0.00 3.56
2510 6864 3.270877 GTGTAGAGGCCTGGTGTAATTG 58.729 50.000 12.00 0.00 0.00 2.32
2511 6865 2.238898 GGTGTAGAGGCCTGGTGTAATT 59.761 50.000 12.00 0.00 0.00 1.40
2512 6866 1.838077 GGTGTAGAGGCCTGGTGTAAT 59.162 52.381 12.00 0.00 0.00 1.89
2513 6867 1.203262 AGGTGTAGAGGCCTGGTGTAA 60.203 52.381 12.00 0.00 33.13 2.41
2514 6868 0.412244 AGGTGTAGAGGCCTGGTGTA 59.588 55.000 12.00 0.00 33.13 2.90
2515 6869 0.412244 TAGGTGTAGAGGCCTGGTGT 59.588 55.000 12.00 0.00 36.38 4.16
2516 6870 0.824759 GTAGGTGTAGAGGCCTGGTG 59.175 60.000 12.00 0.00 36.38 4.17
2517 6871 0.412244 TGTAGGTGTAGAGGCCTGGT 59.588 55.000 12.00 0.00 36.38 4.00
2518 6872 1.482593 CTTGTAGGTGTAGAGGCCTGG 59.517 57.143 12.00 0.00 36.38 4.45
2519 6873 2.457598 TCTTGTAGGTGTAGAGGCCTG 58.542 52.381 12.00 0.00 36.38 4.85
2520 6874 2.921834 TCTTGTAGGTGTAGAGGCCT 57.078 50.000 3.86 3.86 38.81 5.19
2521 6875 2.766828 ACATCTTGTAGGTGTAGAGGCC 59.233 50.000 0.00 0.00 0.00 5.19
2522 6876 3.489398 CGACATCTTGTAGGTGTAGAGGC 60.489 52.174 0.00 0.00 0.00 4.70
2523 6877 3.489398 GCGACATCTTGTAGGTGTAGAGG 60.489 52.174 4.66 0.00 0.00 3.69
2524 6878 3.128764 TGCGACATCTTGTAGGTGTAGAG 59.871 47.826 4.66 0.00 0.00 2.43
2525 6879 3.086282 TGCGACATCTTGTAGGTGTAGA 58.914 45.455 4.66 0.00 0.00 2.59
2526 6880 3.503827 TGCGACATCTTGTAGGTGTAG 57.496 47.619 0.00 0.00 0.00 2.74
2527 6881 3.945981 TTGCGACATCTTGTAGGTGTA 57.054 42.857 0.00 0.00 0.00 2.90
2528 6882 2.831685 TTGCGACATCTTGTAGGTGT 57.168 45.000 0.00 0.00 0.00 4.16
2529 6883 3.325870 TCTTTGCGACATCTTGTAGGTG 58.674 45.455 0.00 0.00 0.00 4.00
2530 6884 3.678056 TCTTTGCGACATCTTGTAGGT 57.322 42.857 0.00 0.00 0.00 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.