Multiple sequence alignment - TraesCS1D01G264600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1D01G264600 | chr1D | 100.000 | 3932 | 0 | 0 | 1 | 3932 | 360392179 | 360388248 | 0.000000e+00 | 7262.0 |
1 | TraesCS1D01G264600 | chr1B | 95.248 | 3241 | 111 | 8 | 585 | 3791 | 482455526 | 482452295 | 0.000000e+00 | 5092.0 |
2 | TraesCS1D01G264600 | chr1B | 89.150 | 341 | 23 | 7 | 1 | 339 | 482456452 | 482456124 | 2.830000e-111 | 412.0 |
3 | TraesCS1D01G264600 | chr1A | 95.028 | 3258 | 127 | 16 | 552 | 3791 | 459951406 | 459948166 | 0.000000e+00 | 5086.0 |
4 | TraesCS1D01G264600 | chr1A | 89.474 | 152 | 14 | 2 | 3781 | 3930 | 306553859 | 306553708 | 1.440000e-44 | 191.0 |
5 | TraesCS1D01G264600 | chr3D | 76.289 | 970 | 205 | 18 | 1877 | 2829 | 516385913 | 516384952 | 9.820000e-136 | 494.0 |
6 | TraesCS1D01G264600 | chr3D | 92.361 | 144 | 11 | 0 | 3787 | 3930 | 75354544 | 75354687 | 5.150000e-49 | 206.0 |
7 | TraesCS1D01G264600 | chr3D | 100.000 | 37 | 0 | 0 | 504 | 540 | 508559783 | 508559747 | 7.050000e-08 | 69.4 |
8 | TraesCS1D01G264600 | chr3D | 90.476 | 42 | 4 | 0 | 2507 | 2548 | 445638704 | 445638745 | 5.490000e-04 | 56.5 |
9 | TraesCS1D01G264600 | chr3A | 76.319 | 967 | 204 | 16 | 1880 | 2829 | 651588867 | 651587909 | 9.820000e-136 | 494.0 |
10 | TraesCS1D01G264600 | chr3A | 94.074 | 135 | 8 | 0 | 3791 | 3925 | 715718348 | 715718482 | 5.150000e-49 | 206.0 |
11 | TraesCS1D01G264600 | chr3A | 92.857 | 140 | 9 | 1 | 3791 | 3930 | 700815046 | 700815184 | 6.660000e-48 | 202.0 |
12 | TraesCS1D01G264600 | chr3A | 93.284 | 134 | 9 | 0 | 3791 | 3924 | 507103485 | 507103618 | 8.620000e-47 | 198.0 |
13 | TraesCS1D01G264600 | chr4A | 93.571 | 140 | 9 | 0 | 3791 | 3930 | 514554080 | 514553941 | 3.980000e-50 | 209.0 |
14 | TraesCS1D01G264600 | chr4A | 94.030 | 134 | 8 | 0 | 3791 | 3924 | 476068972 | 476068839 | 1.850000e-48 | 204.0 |
15 | TraesCS1D01G264600 | chr4A | 91.489 | 47 | 4 | 0 | 2502 | 2548 | 668083808 | 668083762 | 9.120000e-07 | 65.8 |
16 | TraesCS1D01G264600 | chr4A | 90.476 | 42 | 4 | 0 | 2507 | 2548 | 668094127 | 668094086 | 5.490000e-04 | 56.5 |
17 | TraesCS1D01G264600 | chr7D | 92.361 | 144 | 11 | 0 | 3787 | 3930 | 631017842 | 631017699 | 5.150000e-49 | 206.0 |
18 | TraesCS1D01G264600 | chr7D | 91.489 | 47 | 4 | 0 | 2502 | 2548 | 53425114 | 53425068 | 9.120000e-07 | 65.8 |
19 | TraesCS1D01G264600 | chr7D | 97.436 | 39 | 0 | 1 | 503 | 540 | 559273962 | 559273924 | 9.120000e-07 | 65.8 |
20 | TraesCS1D01G264600 | chr6A | 93.431 | 137 | 9 | 0 | 3789 | 3925 | 184350610 | 184350474 | 1.850000e-48 | 204.0 |
21 | TraesCS1D01G264600 | chrUn | 100.000 | 40 | 0 | 0 | 503 | 542 | 478634746 | 478634785 | 1.520000e-09 | 75.0 |
22 | TraesCS1D01G264600 | chr3B | 100.000 | 40 | 0 | 0 | 503 | 542 | 35569087 | 35569126 | 1.520000e-09 | 75.0 |
23 | TraesCS1D01G264600 | chr3B | 100.000 | 40 | 0 | 0 | 503 | 542 | 35635745 | 35635784 | 1.520000e-09 | 75.0 |
24 | TraesCS1D01G264600 | chr3B | 100.000 | 38 | 0 | 0 | 503 | 540 | 34527390 | 34527353 | 1.960000e-08 | 71.3 |
25 | TraesCS1D01G264600 | chr3B | 91.837 | 49 | 4 | 0 | 2502 | 2550 | 76433074 | 76433026 | 7.050000e-08 | 69.4 |
26 | TraesCS1D01G264600 | chr3B | 90.476 | 42 | 4 | 0 | 2507 | 2548 | 584551292 | 584551333 | 5.490000e-04 | 56.5 |
27 | TraesCS1D01G264600 | chr2B | 93.750 | 48 | 2 | 1 | 503 | 549 | 191570771 | 191570724 | 1.960000e-08 | 71.3 |
28 | TraesCS1D01G264600 | chr2B | 93.617 | 47 | 1 | 2 | 506 | 550 | 305311654 | 305311700 | 7.050000e-08 | 69.4 |
29 | TraesCS1D01G264600 | chr5D | 100.000 | 37 | 0 | 0 | 504 | 540 | 356666783 | 356666747 | 7.050000e-08 | 69.4 |
30 | TraesCS1D01G264600 | chr7A | 91.489 | 47 | 4 | 0 | 2502 | 2548 | 55382896 | 55382850 | 9.120000e-07 | 65.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1D01G264600 | chr1D | 360388248 | 360392179 | 3931 | True | 7262 | 7262 | 100.000 | 1 | 3932 | 1 | chr1D.!!$R1 | 3931 |
1 | TraesCS1D01G264600 | chr1B | 482452295 | 482456452 | 4157 | True | 2752 | 5092 | 92.199 | 1 | 3791 | 2 | chr1B.!!$R1 | 3790 |
2 | TraesCS1D01G264600 | chr1A | 459948166 | 459951406 | 3240 | True | 5086 | 5086 | 95.028 | 552 | 3791 | 1 | chr1A.!!$R2 | 3239 |
3 | TraesCS1D01G264600 | chr3D | 516384952 | 516385913 | 961 | True | 494 | 494 | 76.289 | 1877 | 2829 | 1 | chr3D.!!$R2 | 952 |
4 | TraesCS1D01G264600 | chr3A | 651587909 | 651588867 | 958 | True | 494 | 494 | 76.319 | 1880 | 2829 | 1 | chr3A.!!$R1 | 949 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
449 | 452 | 0.040204 | CAACAGCCTCCCCCTTCATT | 59.960 | 55.000 | 0.0 | 0.0 | 0.0 | 2.57 | F |
450 | 453 | 0.332972 | AACAGCCTCCCCCTTCATTC | 59.667 | 55.000 | 0.0 | 0.0 | 0.0 | 2.67 | F |
708 | 1111 | 0.765510 | ACCACCACAACCTCCTCTTC | 59.234 | 55.000 | 0.0 | 0.0 | 0.0 | 2.87 | F |
1211 | 1650 | 1.515952 | CGCTGCTCTCCGTCTTCAG | 60.516 | 63.158 | 0.0 | 0.0 | 0.0 | 3.02 | F |
2296 | 2744 | 0.116940 | AATGGATGTGGCAAAGGGGT | 59.883 | 50.000 | 0.0 | 0.0 | 0.0 | 4.95 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1703 | 2142 | 0.107410 | TGCGTTGTTGGACTTGGAGT | 60.107 | 50.000 | 0.00 | 0.0 | 0.0 | 3.85 | R |
1724 | 2163 | 0.464036 | GATGGTGGTGGCGTAGATGA | 59.536 | 55.000 | 0.00 | 0.0 | 0.0 | 2.92 | R |
1810 | 2249 | 4.311606 | GTGTGGTTCCTCTTCTTCTTCTC | 58.688 | 47.826 | 0.00 | 0.0 | 0.0 | 2.87 | R |
2727 | 3181 | 0.098200 | CAACCATCACATGAGCGCAG | 59.902 | 55.000 | 11.47 | 0.0 | 0.0 | 5.18 | R |
3862 | 4323 | 0.108041 | TAACGCTTCCCCATCCGAAC | 60.108 | 55.000 | 0.00 | 0.0 | 0.0 | 3.95 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
102 | 103 | 7.468141 | TTGTATAATGTGTATGCCAACCAAA | 57.532 | 32.000 | 0.00 | 0.00 | 0.00 | 3.28 |
117 | 118 | 5.994668 | GCCAACCAAATCAAAACTTATTGGA | 59.005 | 36.000 | 9.63 | 0.00 | 42.46 | 3.53 |
188 | 190 | 7.938140 | AAACTAATAAAACATGGAGCAGCTA | 57.062 | 32.000 | 0.00 | 0.00 | 0.00 | 3.32 |
195 | 197 | 1.064166 | ACATGGAGCAGCTAAGGCAAT | 60.064 | 47.619 | 0.00 | 0.00 | 41.70 | 3.56 |
233 | 235 | 4.647424 | TGCTGGAAAAATCGACAAAACT | 57.353 | 36.364 | 0.00 | 0.00 | 0.00 | 2.66 |
234 | 236 | 4.358851 | TGCTGGAAAAATCGACAAAACTG | 58.641 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
245 | 247 | 3.625764 | TCGACAAAACTGAAAACAGGAGG | 59.374 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
247 | 249 | 3.096092 | ACAAAACTGAAAACAGGAGGCA | 58.904 | 40.909 | 0.00 | 0.00 | 0.00 | 4.75 |
249 | 251 | 1.986882 | AACTGAAAACAGGAGGCAGG | 58.013 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
253 | 255 | 0.110486 | GAAAACAGGAGGCAGGGTGA | 59.890 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
254 | 256 | 0.111253 | AAAACAGGAGGCAGGGTGAG | 59.889 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
255 | 257 | 1.062488 | AAACAGGAGGCAGGGTGAGT | 61.062 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
269 | 271 | 3.108376 | GGGTGAGTAGGAGGATGAAAGT | 58.892 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
281 | 283 | 5.123027 | GGAGGATGAAAGTTGTGACAGAATC | 59.877 | 44.000 | 0.00 | 0.00 | 0.00 | 2.52 |
289 | 291 | 9.288576 | TGAAAGTTGTGACAGAATCTTATGAAT | 57.711 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
291 | 293 | 7.621428 | AGTTGTGACAGAATCTTATGAATGG | 57.379 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
302 | 304 | 9.739276 | AGAATCTTATGAATGGTGTTGAAGTAA | 57.261 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
304 | 306 | 9.739276 | AATCTTATGAATGGTGTTGAAGTAAGA | 57.261 | 29.630 | 0.00 | 0.00 | 32.30 | 2.10 |
324 | 327 | 4.507710 | AGAGAGAATTTGCGTTAGATGCA | 58.492 | 39.130 | 0.00 | 0.00 | 38.54 | 3.96 |
339 | 342 | 6.325596 | GTTAGATGCAAAGGGAGTTCAAATC | 58.674 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
340 | 343 | 4.670765 | AGATGCAAAGGGAGTTCAAATCT | 58.329 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
343 | 346 | 3.318839 | TGCAAAGGGAGTTCAAATCTGTG | 59.681 | 43.478 | 0.00 | 0.00 | 0.00 | 3.66 |
346 | 349 | 5.766222 | CAAAGGGAGTTCAAATCTGTGAAG | 58.234 | 41.667 | 0.00 | 0.00 | 38.17 | 3.02 |
350 | 353 | 5.013495 | AGGGAGTTCAAATCTGTGAAGATCA | 59.987 | 40.000 | 0.00 | 0.00 | 38.17 | 2.92 |
352 | 355 | 6.183360 | GGGAGTTCAAATCTGTGAAGATCATG | 60.183 | 42.308 | 0.00 | 0.00 | 38.17 | 3.07 |
356 | 359 | 8.047911 | AGTTCAAATCTGTGAAGATCATGAGAT | 58.952 | 33.333 | 0.09 | 0.00 | 38.17 | 2.75 |
371 | 374 | 7.789273 | ATCATGAGATCAGATCACAGAAAAC | 57.211 | 36.000 | 14.86 | 0.00 | 33.49 | 2.43 |
372 | 375 | 5.809051 | TCATGAGATCAGATCACAGAAAACG | 59.191 | 40.000 | 14.86 | 1.88 | 33.49 | 3.60 |
373 | 376 | 4.498241 | TGAGATCAGATCACAGAAAACGG | 58.502 | 43.478 | 13.14 | 0.00 | 0.00 | 4.44 |
374 | 377 | 4.021104 | TGAGATCAGATCACAGAAAACGGT | 60.021 | 41.667 | 13.14 | 0.00 | 0.00 | 4.83 |
375 | 378 | 4.899502 | AGATCAGATCACAGAAAACGGTT | 58.100 | 39.130 | 13.14 | 0.00 | 0.00 | 4.44 |
376 | 379 | 5.308825 | AGATCAGATCACAGAAAACGGTTT | 58.691 | 37.500 | 13.14 | 0.00 | 0.00 | 3.27 |
377 | 380 | 5.409826 | AGATCAGATCACAGAAAACGGTTTC | 59.590 | 40.000 | 18.30 | 18.30 | 43.05 | 2.78 |
378 | 381 | 4.447290 | TCAGATCACAGAAAACGGTTTCA | 58.553 | 39.130 | 26.71 | 7.42 | 44.82 | 2.69 |
379 | 382 | 4.272504 | TCAGATCACAGAAAACGGTTTCAC | 59.727 | 41.667 | 26.71 | 10.84 | 44.82 | 3.18 |
380 | 383 | 4.035091 | CAGATCACAGAAAACGGTTTCACA | 59.965 | 41.667 | 26.71 | 8.45 | 44.82 | 3.58 |
381 | 384 | 3.750639 | TCACAGAAAACGGTTTCACAC | 57.249 | 42.857 | 26.71 | 1.20 | 44.82 | 3.82 |
382 | 385 | 3.340034 | TCACAGAAAACGGTTTCACACT | 58.660 | 40.909 | 26.71 | 4.09 | 44.82 | 3.55 |
383 | 386 | 3.126171 | TCACAGAAAACGGTTTCACACTG | 59.874 | 43.478 | 26.71 | 18.03 | 44.82 | 3.66 |
385 | 388 | 3.126343 | ACAGAAAACGGTTTCACACTGTC | 59.874 | 43.478 | 26.71 | 0.00 | 45.06 | 3.51 |
386 | 389 | 2.681344 | AGAAAACGGTTTCACACTGTCC | 59.319 | 45.455 | 26.71 | 0.00 | 45.06 | 4.02 |
387 | 390 | 2.116827 | AAACGGTTTCACACTGTCCA | 57.883 | 45.000 | 0.00 | 0.00 | 45.06 | 4.02 |
388 | 391 | 1.663695 | AACGGTTTCACACTGTCCAG | 58.336 | 50.000 | 0.00 | 0.00 | 45.06 | 3.86 |
389 | 392 | 0.814010 | ACGGTTTCACACTGTCCAGC | 60.814 | 55.000 | 0.00 | 0.00 | 41.69 | 4.85 |
390 | 393 | 0.532862 | CGGTTTCACACTGTCCAGCT | 60.533 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
391 | 394 | 1.270094 | CGGTTTCACACTGTCCAGCTA | 60.270 | 52.381 | 0.00 | 0.00 | 0.00 | 3.32 |
392 | 395 | 2.805295 | CGGTTTCACACTGTCCAGCTAA | 60.805 | 50.000 | 0.00 | 0.00 | 0.00 | 3.09 |
393 | 396 | 3.412386 | GGTTTCACACTGTCCAGCTAAT | 58.588 | 45.455 | 0.00 | 0.00 | 0.00 | 1.73 |
394 | 397 | 3.821033 | GGTTTCACACTGTCCAGCTAATT | 59.179 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
395 | 398 | 4.320494 | GGTTTCACACTGTCCAGCTAATTG | 60.320 | 45.833 | 0.00 | 0.00 | 0.00 | 2.32 |
396 | 399 | 3.769739 | TCACACTGTCCAGCTAATTGT | 57.230 | 42.857 | 0.00 | 0.00 | 0.00 | 2.71 |
397 | 400 | 3.664107 | TCACACTGTCCAGCTAATTGTC | 58.336 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
398 | 401 | 2.744202 | CACACTGTCCAGCTAATTGTCC | 59.256 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
399 | 402 | 2.290323 | ACACTGTCCAGCTAATTGTCCC | 60.290 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
400 | 403 | 1.066143 | ACTGTCCAGCTAATTGTCCCG | 60.066 | 52.381 | 0.00 | 0.00 | 0.00 | 5.14 |
401 | 404 | 0.251916 | TGTCCAGCTAATTGTCCCGG | 59.748 | 55.000 | 0.00 | 0.00 | 0.00 | 5.73 |
402 | 405 | 0.252197 | GTCCAGCTAATTGTCCCGGT | 59.748 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
403 | 406 | 1.483415 | GTCCAGCTAATTGTCCCGGTA | 59.517 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
404 | 407 | 2.093341 | GTCCAGCTAATTGTCCCGGTAA | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
419 | 422 | 1.660560 | GGTAAGGCTCGTAGCACCGA | 61.661 | 60.000 | 8.71 | 0.00 | 44.75 | 4.69 |
440 | 443 | 3.359002 | CTGGTTGCAACAGCCTCC | 58.641 | 61.111 | 29.55 | 12.89 | 35.72 | 4.30 |
442 | 445 | 2.991540 | GGTTGCAACAGCCTCCCC | 60.992 | 66.667 | 29.55 | 7.31 | 31.92 | 4.81 |
443 | 446 | 2.991540 | GTTGCAACAGCCTCCCCC | 60.992 | 66.667 | 24.52 | 0.00 | 0.00 | 5.40 |
446 | 449 | 2.361737 | GCAACAGCCTCCCCCTTC | 60.362 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
447 | 450 | 3.170362 | CAACAGCCTCCCCCTTCA | 58.830 | 61.111 | 0.00 | 0.00 | 0.00 | 3.02 |
448 | 451 | 1.693640 | CAACAGCCTCCCCCTTCAT | 59.306 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
449 | 452 | 0.040204 | CAACAGCCTCCCCCTTCATT | 59.960 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
450 | 453 | 0.332972 | AACAGCCTCCCCCTTCATTC | 59.667 | 55.000 | 0.00 | 0.00 | 0.00 | 2.67 |
451 | 454 | 0.846427 | ACAGCCTCCCCCTTCATTCA | 60.846 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
453 | 456 | 1.776667 | CAGCCTCCCCCTTCATTCATA | 59.223 | 52.381 | 0.00 | 0.00 | 0.00 | 2.15 |
454 | 457 | 2.061061 | AGCCTCCCCCTTCATTCATAG | 58.939 | 52.381 | 0.00 | 0.00 | 0.00 | 2.23 |
455 | 458 | 1.777272 | GCCTCCCCCTTCATTCATAGT | 59.223 | 52.381 | 0.00 | 0.00 | 0.00 | 2.12 |
456 | 459 | 2.224646 | GCCTCCCCCTTCATTCATAGTC | 60.225 | 54.545 | 0.00 | 0.00 | 0.00 | 2.59 |
458 | 461 | 3.718956 | CCTCCCCCTTCATTCATAGTCTT | 59.281 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
459 | 462 | 4.445448 | CCTCCCCCTTCATTCATAGTCTTG | 60.445 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
460 | 463 | 4.111577 | TCCCCCTTCATTCATAGTCTTGT | 58.888 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
461 | 464 | 5.285401 | TCCCCCTTCATTCATAGTCTTGTA | 58.715 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
462 | 465 | 5.130477 | TCCCCCTTCATTCATAGTCTTGTAC | 59.870 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
463 | 466 | 5.131142 | CCCCCTTCATTCATAGTCTTGTACT | 59.869 | 44.000 | 0.00 | 0.00 | 42.62 | 2.73 |
466 | 469 | 7.928706 | CCCCTTCATTCATAGTCTTGTACTTAG | 59.071 | 40.741 | 0.00 | 0.00 | 39.80 | 2.18 |
467 | 470 | 7.439655 | CCCTTCATTCATAGTCTTGTACTTAGC | 59.560 | 40.741 | 0.00 | 0.00 | 39.80 | 3.09 |
468 | 471 | 7.981789 | CCTTCATTCATAGTCTTGTACTTAGCA | 59.018 | 37.037 | 0.00 | 0.00 | 39.80 | 3.49 |
469 | 472 | 9.539825 | CTTCATTCATAGTCTTGTACTTAGCAT | 57.460 | 33.333 | 0.00 | 0.00 | 39.80 | 3.79 |
471 | 474 | 9.967346 | TCATTCATAGTCTTGTACTTAGCATAC | 57.033 | 33.333 | 0.00 | 0.00 | 39.80 | 2.39 |
472 | 475 | 9.973450 | CATTCATAGTCTTGTACTTAGCATACT | 57.027 | 33.333 | 0.00 | 0.00 | 39.80 | 2.12 |
473 | 476 | 9.973450 | ATTCATAGTCTTGTACTTAGCATACTG | 57.027 | 33.333 | 0.00 | 0.00 | 39.80 | 2.74 |
474 | 477 | 8.521170 | TCATAGTCTTGTACTTAGCATACTGT | 57.479 | 34.615 | 0.00 | 0.00 | 39.80 | 3.55 |
475 | 478 | 9.623000 | TCATAGTCTTGTACTTAGCATACTGTA | 57.377 | 33.333 | 0.00 | 0.00 | 39.80 | 2.74 |
476 | 479 | 9.885934 | CATAGTCTTGTACTTAGCATACTGTAG | 57.114 | 37.037 | 0.00 | 0.00 | 39.80 | 2.74 |
477 | 480 | 7.941431 | AGTCTTGTACTTAGCATACTGTAGT | 57.059 | 36.000 | 0.00 | 0.00 | 33.35 | 2.73 |
478 | 481 | 7.987649 | AGTCTTGTACTTAGCATACTGTAGTC | 58.012 | 38.462 | 0.00 | 0.00 | 33.35 | 2.59 |
479 | 482 | 7.067251 | AGTCTTGTACTTAGCATACTGTAGTCC | 59.933 | 40.741 | 0.00 | 0.00 | 33.35 | 3.85 |
482 | 485 | 8.991783 | TTGTACTTAGCATACTGTAGTCCTAT | 57.008 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
483 | 486 | 8.991783 | TGTACTTAGCATACTGTAGTCCTATT | 57.008 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
484 | 487 | 8.847196 | TGTACTTAGCATACTGTAGTCCTATTG | 58.153 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
485 | 488 | 7.899648 | ACTTAGCATACTGTAGTCCTATTGT | 57.100 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
486 | 489 | 8.307582 | ACTTAGCATACTGTAGTCCTATTGTT | 57.692 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
487 | 490 | 8.759782 | ACTTAGCATACTGTAGTCCTATTGTTT | 58.240 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
489 | 492 | 7.849804 | AGCATACTGTAGTCCTATTGTTTTG | 57.150 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
490 | 493 | 7.620880 | AGCATACTGTAGTCCTATTGTTTTGA | 58.379 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
492 | 495 | 8.726988 | GCATACTGTAGTCCTATTGTTTTGAAA | 58.273 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
523 | 526 | 9.640963 | AACTACCTTCTTCAATATATGATACGC | 57.359 | 33.333 | 0.00 | 0.00 | 38.03 | 4.42 |
524 | 527 | 8.803235 | ACTACCTTCTTCAATATATGATACGCA | 58.197 | 33.333 | 0.00 | 0.00 | 38.03 | 5.24 |
525 | 528 | 7.891183 | ACCTTCTTCAATATATGATACGCAC | 57.109 | 36.000 | 0.00 | 0.00 | 38.03 | 5.34 |
526 | 529 | 7.441836 | ACCTTCTTCAATATATGATACGCACA | 58.558 | 34.615 | 0.00 | 0.00 | 38.03 | 4.57 |
527 | 530 | 7.385205 | ACCTTCTTCAATATATGATACGCACAC | 59.615 | 37.037 | 0.00 | 0.00 | 38.03 | 3.82 |
528 | 531 | 7.600375 | CCTTCTTCAATATATGATACGCACACT | 59.400 | 37.037 | 0.00 | 0.00 | 38.03 | 3.55 |
530 | 533 | 6.801862 | TCTTCAATATATGATACGCACACTCG | 59.198 | 38.462 | 0.00 | 0.00 | 38.03 | 4.18 |
532 | 535 | 5.856455 | TCAATATATGATACGCACACTCGTG | 59.144 | 40.000 | 0.00 | 0.00 | 38.56 | 4.35 |
545 | 598 | 4.463209 | CACACTCGTGCGTATTCAAATTT | 58.537 | 39.130 | 0.00 | 0.00 | 36.06 | 1.82 |
617 | 1019 | 4.467438 | TCAAACAGATGAGCCAGATGTCTA | 59.533 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
618 | 1020 | 4.399004 | AACAGATGAGCCAGATGTCTAC | 57.601 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
697 | 1100 | 4.927782 | GTCGCAGCCACCACCACA | 62.928 | 66.667 | 0.00 | 0.00 | 0.00 | 4.17 |
708 | 1111 | 0.765510 | ACCACCACAACCTCCTCTTC | 59.234 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
803 | 1208 | 2.064581 | GCCCCACCCGTCATACTCT | 61.065 | 63.158 | 0.00 | 0.00 | 0.00 | 3.24 |
921 | 1342 | 3.057876 | CCGCTATCTGCTCGAGTATTTCT | 60.058 | 47.826 | 15.13 | 0.00 | 40.11 | 2.52 |
1210 | 1649 | 2.268802 | ACGCTGCTCTCCGTCTTCA | 61.269 | 57.895 | 0.00 | 0.00 | 31.00 | 3.02 |
1211 | 1650 | 1.515952 | CGCTGCTCTCCGTCTTCAG | 60.516 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
1365 | 1804 | 2.266055 | CAGTCCTGCTTCCCGTCC | 59.734 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
1437 | 1876 | 2.968206 | GAGTACAGGGCCGTCGTT | 59.032 | 61.111 | 0.00 | 0.00 | 0.00 | 3.85 |
1683 | 2122 | 2.203640 | ATCCTCGGCCTCGGCATA | 60.204 | 61.111 | 10.51 | 0.00 | 44.11 | 3.14 |
1692 | 2131 | 2.343758 | CTCGGCATATCCACCCCG | 59.656 | 66.667 | 0.00 | 0.00 | 41.97 | 5.73 |
1698 | 2137 | 1.843376 | CATATCCACCCCGCCCTCT | 60.843 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
1703 | 2142 | 3.636231 | CACCCCGCCCTCTCACAA | 61.636 | 66.667 | 0.00 | 0.00 | 0.00 | 3.33 |
1810 | 2249 | 1.901650 | GAGAAAGACAAGGCACGCCG | 61.902 | 60.000 | 1.61 | 0.00 | 41.95 | 6.46 |
2296 | 2744 | 0.116940 | AATGGATGTGGCAAAGGGGT | 59.883 | 50.000 | 0.00 | 0.00 | 0.00 | 4.95 |
2727 | 3181 | 4.584743 | AGGTTTGTTCTTGTTGGAATCCTC | 59.415 | 41.667 | 0.00 | 0.00 | 0.00 | 3.71 |
2772 | 3226 | 4.530857 | CCGACCATCACCGAGGCC | 62.531 | 72.222 | 0.00 | 0.00 | 0.00 | 5.19 |
3175 | 3633 | 9.893305 | CTTAGTTAAAAGTTATGTGTTGGGAAG | 57.107 | 33.333 | 0.00 | 0.00 | 0.00 | 3.46 |
3200 | 3658 | 4.495422 | ACTAGCGGTGTTAAGTTCATCAG | 58.505 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
3239 | 3699 | 6.151144 | AGGAAGATACATTTAAGGTTGCACAC | 59.849 | 38.462 | 0.00 | 0.00 | 0.00 | 3.82 |
3298 | 3758 | 0.819259 | GCTTCAGTTCACACAGGCCA | 60.819 | 55.000 | 5.01 | 0.00 | 0.00 | 5.36 |
3299 | 3759 | 0.947244 | CTTCAGTTCACACAGGCCAC | 59.053 | 55.000 | 5.01 | 0.00 | 0.00 | 5.01 |
3311 | 3771 | 4.467084 | GGCCACGGCAGGATTCGA | 62.467 | 66.667 | 10.83 | 0.00 | 44.11 | 3.71 |
3504 | 3964 | 4.274147 | TCAGCTTTTGGGTTACTTGTCAA | 58.726 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
3542 | 4002 | 5.694458 | GCGGTTACCATTCACTGAAATTTTT | 59.306 | 36.000 | 1.13 | 0.00 | 0.00 | 1.94 |
3593 | 4053 | 6.938030 | ACAGTTTCGGTTATTCAATTGGACTA | 59.062 | 34.615 | 5.42 | 0.00 | 0.00 | 2.59 |
3629 | 4089 | 3.189287 | CAGTTTGCAGGGTATGAAGACAC | 59.811 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
3639 | 4099 | 0.800631 | ATGAAGACACGCATGCTGTG | 59.199 | 50.000 | 28.73 | 28.73 | 42.99 | 3.66 |
3673 | 4133 | 3.260632 | TGCAGCAAGGAACTATGTAGTGA | 59.739 | 43.478 | 0.00 | 0.00 | 38.49 | 3.41 |
3674 | 4134 | 4.080919 | TGCAGCAAGGAACTATGTAGTGAT | 60.081 | 41.667 | 0.00 | 0.00 | 38.49 | 3.06 |
3675 | 4135 | 4.272018 | GCAGCAAGGAACTATGTAGTGATG | 59.728 | 45.833 | 0.00 | 0.00 | 38.49 | 3.07 |
3676 | 4136 | 4.272018 | CAGCAAGGAACTATGTAGTGATGC | 59.728 | 45.833 | 9.70 | 9.70 | 38.49 | 3.91 |
3727 | 4188 | 5.419542 | TGATCAGCCACATTAAGTACTGAC | 58.580 | 41.667 | 0.00 | 0.00 | 42.18 | 3.51 |
3791 | 4252 | 2.641321 | TCATGCCCTTGGAGGATATGAG | 59.359 | 50.000 | 0.00 | 0.00 | 37.67 | 2.90 |
3792 | 4253 | 1.438469 | TGCCCTTGGAGGATATGAGG | 58.562 | 55.000 | 0.00 | 0.00 | 37.67 | 3.86 |
3794 | 4255 | 0.695347 | CCCTTGGAGGATATGAGGGC | 59.305 | 60.000 | 0.00 | 0.00 | 40.53 | 5.19 |
3795 | 4256 | 1.438469 | CCTTGGAGGATATGAGGGCA | 58.562 | 55.000 | 0.00 | 0.00 | 37.67 | 5.36 |
3796 | 4257 | 1.991070 | CCTTGGAGGATATGAGGGCAT | 59.009 | 52.381 | 0.00 | 0.00 | 37.67 | 4.40 |
3797 | 4258 | 2.290768 | CCTTGGAGGATATGAGGGCATG | 60.291 | 54.545 | 0.00 | 0.00 | 37.67 | 4.06 |
3798 | 4259 | 1.365293 | TGGAGGATATGAGGGCATGG | 58.635 | 55.000 | 0.00 | 0.00 | 35.94 | 3.66 |
3799 | 4260 | 0.034670 | GGAGGATATGAGGGCATGGC | 60.035 | 60.000 | 11.56 | 11.56 | 35.94 | 4.40 |
3812 | 4273 | 1.669440 | CATGGCCAATGCATAGCCC | 59.331 | 57.895 | 28.68 | 16.97 | 46.55 | 5.19 |
3813 | 4274 | 1.534717 | ATGGCCAATGCATAGCCCC | 60.535 | 57.895 | 28.68 | 15.48 | 46.55 | 5.80 |
3814 | 4275 | 2.123338 | GGCCAATGCATAGCCCCA | 60.123 | 61.111 | 23.94 | 0.00 | 41.00 | 4.96 |
3815 | 4276 | 2.205152 | GGCCAATGCATAGCCCCAG | 61.205 | 63.158 | 23.94 | 0.85 | 41.00 | 4.45 |
3816 | 4277 | 2.205152 | GCCAATGCATAGCCCCAGG | 61.205 | 63.158 | 0.00 | 0.00 | 37.47 | 4.45 |
3817 | 4278 | 1.532316 | CCAATGCATAGCCCCAGGG | 60.532 | 63.158 | 0.00 | 0.00 | 38.57 | 4.45 |
3818 | 4279 | 1.231068 | CAATGCATAGCCCCAGGGT | 59.769 | 57.895 | 4.22 | 0.00 | 37.65 | 4.34 |
3819 | 4280 | 1.111116 | CAATGCATAGCCCCAGGGTG | 61.111 | 60.000 | 4.22 | 0.00 | 37.65 | 4.61 |
3820 | 4281 | 1.288508 | AATGCATAGCCCCAGGGTGA | 61.289 | 55.000 | 4.22 | 0.00 | 37.65 | 4.02 |
3821 | 4282 | 1.070127 | ATGCATAGCCCCAGGGTGAT | 61.070 | 55.000 | 4.22 | 0.00 | 37.65 | 3.06 |
3822 | 4283 | 1.228367 | GCATAGCCCCAGGGTGATG | 60.228 | 63.158 | 4.22 | 9.26 | 37.65 | 3.07 |
3823 | 4284 | 1.228367 | CATAGCCCCAGGGTGATGC | 60.228 | 63.158 | 4.22 | 0.00 | 37.65 | 3.91 |
3824 | 4285 | 2.464403 | ATAGCCCCAGGGTGATGCC | 61.464 | 63.158 | 4.22 | 0.00 | 37.65 | 4.40 |
3825 | 4286 | 2.940421 | ATAGCCCCAGGGTGATGCCT | 62.940 | 60.000 | 4.22 | 0.00 | 37.65 | 4.75 |
3826 | 4287 | 4.512914 | GCCCCAGGGTGATGCCTC | 62.513 | 72.222 | 4.22 | 0.00 | 37.65 | 4.70 |
3827 | 4288 | 3.016971 | CCCCAGGGTGATGCCTCA | 61.017 | 66.667 | 4.22 | 0.00 | 37.43 | 3.86 |
3836 | 4297 | 2.801859 | TGATGCCTCACATGCCATG | 58.198 | 52.632 | 2.40 | 2.40 | 39.84 | 3.66 |
3837 | 4298 | 0.033894 | TGATGCCTCACATGCCATGT | 60.034 | 50.000 | 4.03 | 4.03 | 46.22 | 3.21 |
3838 | 4299 | 1.212441 | TGATGCCTCACATGCCATGTA | 59.788 | 47.619 | 10.53 | 0.00 | 42.70 | 2.29 |
3839 | 4300 | 1.878088 | GATGCCTCACATGCCATGTAG | 59.122 | 52.381 | 10.53 | 8.38 | 42.70 | 2.74 |
3840 | 4301 | 0.107066 | TGCCTCACATGCCATGTAGG | 60.107 | 55.000 | 20.19 | 20.19 | 42.70 | 3.18 |
3841 | 4302 | 0.181114 | GCCTCACATGCCATGTAGGA | 59.819 | 55.000 | 25.01 | 14.39 | 42.70 | 2.94 |
3842 | 4303 | 1.202855 | GCCTCACATGCCATGTAGGAT | 60.203 | 52.381 | 25.01 | 0.00 | 42.70 | 3.24 |
3843 | 4304 | 2.750807 | GCCTCACATGCCATGTAGGATT | 60.751 | 50.000 | 25.01 | 0.00 | 42.70 | 3.01 |
3844 | 4305 | 2.882761 | CCTCACATGCCATGTAGGATTG | 59.117 | 50.000 | 19.99 | 6.09 | 42.70 | 2.67 |
3845 | 4306 | 2.882761 | CTCACATGCCATGTAGGATTGG | 59.117 | 50.000 | 10.53 | 0.00 | 42.70 | 3.16 |
3846 | 4307 | 2.509131 | TCACATGCCATGTAGGATTGGA | 59.491 | 45.455 | 10.53 | 0.00 | 42.70 | 3.53 |
3847 | 4308 | 3.138839 | TCACATGCCATGTAGGATTGGAT | 59.861 | 43.478 | 10.53 | 0.00 | 42.70 | 3.41 |
3848 | 4309 | 4.350520 | TCACATGCCATGTAGGATTGGATA | 59.649 | 41.667 | 10.53 | 0.00 | 42.70 | 2.59 |
3849 | 4310 | 5.072055 | CACATGCCATGTAGGATTGGATAA | 58.928 | 41.667 | 10.53 | 0.00 | 42.70 | 1.75 |
3850 | 4311 | 5.048504 | CACATGCCATGTAGGATTGGATAAC | 60.049 | 44.000 | 10.53 | 0.00 | 42.70 | 1.89 |
3851 | 4312 | 4.787135 | TGCCATGTAGGATTGGATAACA | 57.213 | 40.909 | 0.00 | 0.00 | 41.22 | 2.41 |
3852 | 4313 | 4.717877 | TGCCATGTAGGATTGGATAACAG | 58.282 | 43.478 | 0.00 | 0.00 | 41.22 | 3.16 |
3853 | 4314 | 4.411869 | TGCCATGTAGGATTGGATAACAGA | 59.588 | 41.667 | 0.00 | 0.00 | 41.22 | 3.41 |
3854 | 4315 | 5.104151 | TGCCATGTAGGATTGGATAACAGAA | 60.104 | 40.000 | 0.00 | 0.00 | 41.22 | 3.02 |
3855 | 4316 | 5.827797 | GCCATGTAGGATTGGATAACAGAAA | 59.172 | 40.000 | 0.00 | 0.00 | 41.22 | 2.52 |
3856 | 4317 | 6.321181 | GCCATGTAGGATTGGATAACAGAAAA | 59.679 | 38.462 | 0.00 | 0.00 | 41.22 | 2.29 |
3857 | 4318 | 7.147915 | GCCATGTAGGATTGGATAACAGAAAAA | 60.148 | 37.037 | 0.00 | 0.00 | 41.22 | 1.94 |
3858 | 4319 | 8.408601 | CCATGTAGGATTGGATAACAGAAAAAG | 58.591 | 37.037 | 0.00 | 0.00 | 41.22 | 2.27 |
3859 | 4320 | 8.960591 | CATGTAGGATTGGATAACAGAAAAAGT | 58.039 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
3861 | 4322 | 9.667107 | TGTAGGATTGGATAACAGAAAAAGTAG | 57.333 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
3862 | 4323 | 9.110502 | GTAGGATTGGATAACAGAAAAAGTAGG | 57.889 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
3863 | 4324 | 7.699878 | AGGATTGGATAACAGAAAAAGTAGGT | 58.300 | 34.615 | 0.00 | 0.00 | 0.00 | 3.08 |
3864 | 4325 | 8.170730 | AGGATTGGATAACAGAAAAAGTAGGTT | 58.829 | 33.333 | 0.00 | 0.00 | 0.00 | 3.50 |
3865 | 4326 | 8.459635 | GGATTGGATAACAGAAAAAGTAGGTTC | 58.540 | 37.037 | 0.00 | 0.00 | 0.00 | 3.62 |
3866 | 4327 | 7.429636 | TTGGATAACAGAAAAAGTAGGTTCG | 57.570 | 36.000 | 0.00 | 0.00 | 0.00 | 3.95 |
3867 | 4328 | 5.935789 | TGGATAACAGAAAAAGTAGGTTCGG | 59.064 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3868 | 4329 | 6.168389 | GGATAACAGAAAAAGTAGGTTCGGA | 58.832 | 40.000 | 0.00 | 0.00 | 0.00 | 4.55 |
3869 | 4330 | 6.822170 | GGATAACAGAAAAAGTAGGTTCGGAT | 59.178 | 38.462 | 0.00 | 0.00 | 0.00 | 4.18 |
3870 | 4331 | 5.941948 | AACAGAAAAAGTAGGTTCGGATG | 57.058 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
3871 | 4332 | 4.324267 | ACAGAAAAAGTAGGTTCGGATGG | 58.676 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
3872 | 4333 | 3.689649 | CAGAAAAAGTAGGTTCGGATGGG | 59.310 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
3873 | 4334 | 2.801077 | AAAAGTAGGTTCGGATGGGG | 57.199 | 50.000 | 0.00 | 0.00 | 0.00 | 4.96 |
3874 | 4335 | 1.961133 | AAAGTAGGTTCGGATGGGGA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
3875 | 4336 | 1.961133 | AAGTAGGTTCGGATGGGGAA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 3.97 |
3876 | 4337 | 1.497161 | AGTAGGTTCGGATGGGGAAG | 58.503 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
3877 | 4338 | 0.179054 | GTAGGTTCGGATGGGGAAGC | 60.179 | 60.000 | 0.00 | 0.00 | 41.06 | 3.86 |
3878 | 4339 | 1.682451 | TAGGTTCGGATGGGGAAGCG | 61.682 | 60.000 | 0.00 | 0.00 | 44.35 | 4.68 |
3879 | 4340 | 2.267961 | GTTCGGATGGGGAAGCGT | 59.732 | 61.111 | 0.00 | 0.00 | 0.00 | 5.07 |
3880 | 4341 | 1.376812 | GTTCGGATGGGGAAGCGTT | 60.377 | 57.895 | 0.00 | 0.00 | 0.00 | 4.84 |
3881 | 4342 | 0.108041 | GTTCGGATGGGGAAGCGTTA | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3882 | 4343 | 0.834612 | TTCGGATGGGGAAGCGTTAT | 59.165 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
3883 | 4344 | 0.391597 | TCGGATGGGGAAGCGTTATC | 59.608 | 55.000 | 0.00 | 0.00 | 0.00 | 1.75 |
3884 | 4345 | 0.602905 | CGGATGGGGAAGCGTTATCC | 60.603 | 60.000 | 0.00 | 0.00 | 35.16 | 2.59 |
3885 | 4346 | 0.765510 | GGATGGGGAAGCGTTATCCT | 59.234 | 55.000 | 0.00 | 0.00 | 37.14 | 3.24 |
3886 | 4347 | 1.270893 | GGATGGGGAAGCGTTATCCTC | 60.271 | 57.143 | 0.00 | 0.61 | 37.99 | 3.71 |
3887 | 4348 | 1.694696 | GATGGGGAAGCGTTATCCTCT | 59.305 | 52.381 | 5.05 | 0.00 | 38.35 | 3.69 |
3888 | 4349 | 1.120530 | TGGGGAAGCGTTATCCTCTC | 58.879 | 55.000 | 5.05 | 0.00 | 38.35 | 3.20 |
3889 | 4350 | 0.393448 | GGGGAAGCGTTATCCTCTCC | 59.607 | 60.000 | 3.81 | 0.00 | 34.40 | 3.71 |
3890 | 4351 | 1.120530 | GGGAAGCGTTATCCTCTCCA | 58.879 | 55.000 | 3.81 | 0.00 | 37.14 | 3.86 |
3891 | 4352 | 1.069358 | GGGAAGCGTTATCCTCTCCAG | 59.931 | 57.143 | 3.81 | 0.00 | 37.14 | 3.86 |
3892 | 4353 | 1.069358 | GGAAGCGTTATCCTCTCCAGG | 59.931 | 57.143 | 0.00 | 0.00 | 42.01 | 4.45 |
3906 | 4367 | 2.151502 | TCCAGGAGGAGAGTGCTTAG | 57.848 | 55.000 | 0.00 | 0.00 | 39.61 | 2.18 |
3907 | 4368 | 1.641192 | TCCAGGAGGAGAGTGCTTAGA | 59.359 | 52.381 | 0.00 | 0.00 | 39.61 | 2.10 |
3908 | 4369 | 2.031120 | CCAGGAGGAGAGTGCTTAGAG | 58.969 | 57.143 | 0.00 | 0.00 | 36.89 | 2.43 |
3909 | 4370 | 2.357673 | CCAGGAGGAGAGTGCTTAGAGA | 60.358 | 54.545 | 0.00 | 0.00 | 36.89 | 3.10 |
3910 | 4371 | 2.951642 | CAGGAGGAGAGTGCTTAGAGAG | 59.048 | 54.545 | 0.00 | 0.00 | 0.00 | 3.20 |
3911 | 4372 | 2.849943 | AGGAGGAGAGTGCTTAGAGAGA | 59.150 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
3912 | 4373 | 3.268334 | AGGAGGAGAGTGCTTAGAGAGAA | 59.732 | 47.826 | 0.00 | 0.00 | 0.00 | 2.87 |
3913 | 4374 | 4.020543 | GGAGGAGAGTGCTTAGAGAGAAA | 58.979 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
3914 | 4375 | 4.464597 | GGAGGAGAGTGCTTAGAGAGAAAA | 59.535 | 45.833 | 0.00 | 0.00 | 0.00 | 2.29 |
3915 | 4376 | 5.046950 | GGAGGAGAGTGCTTAGAGAGAAAAA | 60.047 | 44.000 | 0.00 | 0.00 | 0.00 | 1.94 |
3916 | 4377 | 6.036577 | AGGAGAGTGCTTAGAGAGAAAAAG | 57.963 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
3917 | 4378 | 5.542251 | AGGAGAGTGCTTAGAGAGAAAAAGT | 59.458 | 40.000 | 0.00 | 0.00 | 0.00 | 2.66 |
3918 | 4379 | 5.637387 | GGAGAGTGCTTAGAGAGAAAAAGTG | 59.363 | 44.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3919 | 4380 | 6.168270 | AGAGTGCTTAGAGAGAAAAAGTGT | 57.832 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
3920 | 4381 | 5.988561 | AGAGTGCTTAGAGAGAAAAAGTGTG | 59.011 | 40.000 | 0.00 | 0.00 | 0.00 | 3.82 |
3921 | 4382 | 5.059833 | AGTGCTTAGAGAGAAAAAGTGTGG | 58.940 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
3922 | 4383 | 4.816925 | GTGCTTAGAGAGAAAAAGTGTGGT | 59.183 | 41.667 | 0.00 | 0.00 | 0.00 | 4.16 |
3923 | 4384 | 5.050023 | GTGCTTAGAGAGAAAAAGTGTGGTC | 60.050 | 44.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3924 | 4385 | 4.452795 | GCTTAGAGAGAAAAAGTGTGGTCC | 59.547 | 45.833 | 0.00 | 0.00 | 0.00 | 4.46 |
3925 | 4386 | 3.113260 | AGAGAGAAAAAGTGTGGTCCG | 57.887 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
3926 | 4387 | 2.698797 | AGAGAGAAAAAGTGTGGTCCGA | 59.301 | 45.455 | 0.00 | 0.00 | 0.00 | 4.55 |
3927 | 4388 | 3.325135 | AGAGAGAAAAAGTGTGGTCCGAT | 59.675 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
3928 | 4389 | 3.403038 | AGAGAAAAAGTGTGGTCCGATG | 58.597 | 45.455 | 0.00 | 0.00 | 0.00 | 3.84 |
3929 | 4390 | 1.880027 | AGAAAAAGTGTGGTCCGATGC | 59.120 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
3930 | 4391 | 0.591170 | AAAAAGTGTGGTCCGATGCG | 59.409 | 50.000 | 0.00 | 0.00 | 0.00 | 4.73 |
3931 | 4392 | 0.534203 | AAAAGTGTGGTCCGATGCGT | 60.534 | 50.000 | 0.00 | 0.00 | 0.00 | 5.24 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
81 | 82 | 7.888250 | TGATTTGGTTGGCATACACATTATA | 57.112 | 32.000 | 0.00 | 0.00 | 0.00 | 0.98 |
83 | 84 | 6.596309 | TTGATTTGGTTGGCATACACATTA | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
84 | 85 | 5.480642 | TTGATTTGGTTGGCATACACATT | 57.519 | 34.783 | 0.00 | 0.00 | 0.00 | 2.71 |
85 | 86 | 5.480642 | TTTGATTTGGTTGGCATACACAT | 57.519 | 34.783 | 0.00 | 0.00 | 0.00 | 3.21 |
86 | 87 | 4.944619 | TTTGATTTGGTTGGCATACACA | 57.055 | 36.364 | 0.00 | 0.00 | 0.00 | 3.72 |
87 | 88 | 5.296748 | AGTTTTGATTTGGTTGGCATACAC | 58.703 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
88 | 89 | 5.543507 | AGTTTTGATTTGGTTGGCATACA | 57.456 | 34.783 | 0.00 | 0.00 | 0.00 | 2.29 |
89 | 90 | 8.442384 | CAATAAGTTTTGATTTGGTTGGCATAC | 58.558 | 33.333 | 0.00 | 0.00 | 0.00 | 2.39 |
208 | 210 | 5.452078 | TTTGTCGATTTTTCCAGCATTCT | 57.548 | 34.783 | 0.00 | 0.00 | 0.00 | 2.40 |
209 | 211 | 5.691754 | AGTTTTGTCGATTTTTCCAGCATTC | 59.308 | 36.000 | 0.00 | 0.00 | 0.00 | 2.67 |
233 | 235 | 0.178992 | CACCCTGCCTCCTGTTTTCA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
234 | 236 | 0.110486 | TCACCCTGCCTCCTGTTTTC | 59.890 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
245 | 247 | 0.755686 | CATCCTCCTACTCACCCTGC | 59.244 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
247 | 249 | 3.246167 | ACTTTCATCCTCCTACTCACCCT | 60.246 | 47.826 | 0.00 | 0.00 | 0.00 | 4.34 |
249 | 251 | 4.020128 | ACAACTTTCATCCTCCTACTCACC | 60.020 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
253 | 255 | 4.593206 | TGTCACAACTTTCATCCTCCTACT | 59.407 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
254 | 256 | 4.894784 | TGTCACAACTTTCATCCTCCTAC | 58.105 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
255 | 257 | 4.838423 | TCTGTCACAACTTTCATCCTCCTA | 59.162 | 41.667 | 0.00 | 0.00 | 0.00 | 2.94 |
269 | 271 | 6.942005 | ACACCATTCATAAGATTCTGTCACAA | 59.058 | 34.615 | 0.00 | 0.00 | 0.00 | 3.33 |
281 | 283 | 8.777865 | TCTCTTACTTCAACACCATTCATAAG | 57.222 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
289 | 291 | 6.017109 | GCAAATTCTCTCTTACTTCAACACCA | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 4.17 |
291 | 293 | 6.074005 | CGCAAATTCTCTCTTACTTCAACAC | 58.926 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
302 | 304 | 4.507710 | TGCATCTAACGCAAATTCTCTCT | 58.492 | 39.130 | 0.00 | 0.00 | 36.17 | 3.10 |
324 | 327 | 5.694995 | TCTTCACAGATTTGAACTCCCTTT | 58.305 | 37.500 | 0.00 | 0.00 | 32.02 | 3.11 |
339 | 342 | 6.643360 | GTGATCTGATCTCATGATCTTCACAG | 59.357 | 42.308 | 17.82 | 11.21 | 46.84 | 3.66 |
340 | 343 | 6.097839 | TGTGATCTGATCTCATGATCTTCACA | 59.902 | 38.462 | 17.82 | 21.27 | 46.59 | 3.58 |
343 | 346 | 6.983984 | TCTGTGATCTGATCTCATGATCTTC | 58.016 | 40.000 | 19.27 | 0.00 | 46.84 | 2.87 |
346 | 349 | 7.306690 | CGTTTTCTGTGATCTGATCTCATGATC | 60.307 | 40.741 | 19.27 | 10.42 | 46.89 | 2.92 |
350 | 353 | 5.114780 | CCGTTTTCTGTGATCTGATCTCAT | 58.885 | 41.667 | 19.27 | 0.00 | 32.96 | 2.90 |
352 | 355 | 4.499183 | ACCGTTTTCTGTGATCTGATCTC | 58.501 | 43.478 | 17.82 | 14.65 | 0.00 | 2.75 |
356 | 359 | 4.272504 | GTGAAACCGTTTTCTGTGATCTGA | 59.727 | 41.667 | 6.99 | 0.00 | 41.64 | 3.27 |
358 | 361 | 4.035208 | GTGTGAAACCGTTTTCTGTGATCT | 59.965 | 41.667 | 6.99 | 0.00 | 41.64 | 2.75 |
359 | 362 | 4.035208 | AGTGTGAAACCGTTTTCTGTGATC | 59.965 | 41.667 | 6.99 | 0.00 | 41.64 | 2.92 |
360 | 363 | 3.945285 | AGTGTGAAACCGTTTTCTGTGAT | 59.055 | 39.130 | 6.99 | 0.00 | 41.64 | 3.06 |
361 | 364 | 3.126171 | CAGTGTGAAACCGTTTTCTGTGA | 59.874 | 43.478 | 6.99 | 0.00 | 41.64 | 3.58 |
362 | 365 | 3.119990 | ACAGTGTGAAACCGTTTTCTGTG | 60.120 | 43.478 | 6.99 | 2.12 | 41.64 | 3.66 |
363 | 366 | 3.078837 | ACAGTGTGAAACCGTTTTCTGT | 58.921 | 40.909 | 6.99 | 13.86 | 41.64 | 3.41 |
364 | 367 | 3.486875 | GGACAGTGTGAAACCGTTTTCTG | 60.487 | 47.826 | 0.00 | 7.62 | 41.64 | 3.02 |
365 | 368 | 2.681344 | GGACAGTGTGAAACCGTTTTCT | 59.319 | 45.455 | 0.00 | 0.00 | 41.64 | 2.52 |
366 | 369 | 2.420722 | TGGACAGTGTGAAACCGTTTTC | 59.579 | 45.455 | 0.00 | 0.00 | 41.49 | 2.29 |
367 | 370 | 2.422127 | CTGGACAGTGTGAAACCGTTTT | 59.578 | 45.455 | 0.00 | 0.00 | 34.36 | 2.43 |
368 | 371 | 2.014128 | CTGGACAGTGTGAAACCGTTT | 58.986 | 47.619 | 0.00 | 0.00 | 34.36 | 3.60 |
369 | 372 | 1.663695 | CTGGACAGTGTGAAACCGTT | 58.336 | 50.000 | 0.00 | 0.00 | 34.36 | 4.44 |
370 | 373 | 0.814010 | GCTGGACAGTGTGAAACCGT | 60.814 | 55.000 | 0.00 | 0.00 | 34.36 | 4.83 |
371 | 374 | 0.532862 | AGCTGGACAGTGTGAAACCG | 60.533 | 55.000 | 0.00 | 0.00 | 34.36 | 4.44 |
372 | 375 | 2.543777 | TAGCTGGACAGTGTGAAACC | 57.456 | 50.000 | 0.00 | 0.00 | 34.36 | 3.27 |
373 | 376 | 4.275936 | ACAATTAGCTGGACAGTGTGAAAC | 59.724 | 41.667 | 0.00 | 0.00 | 37.35 | 2.78 |
374 | 377 | 4.460263 | ACAATTAGCTGGACAGTGTGAAA | 58.540 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
375 | 378 | 4.065088 | GACAATTAGCTGGACAGTGTGAA | 58.935 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
376 | 379 | 3.557054 | GGACAATTAGCTGGACAGTGTGA | 60.557 | 47.826 | 0.00 | 0.00 | 0.00 | 3.58 |
377 | 380 | 2.744202 | GGACAATTAGCTGGACAGTGTG | 59.256 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
378 | 381 | 2.290323 | GGGACAATTAGCTGGACAGTGT | 60.290 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
379 | 382 | 2.359900 | GGGACAATTAGCTGGACAGTG | 58.640 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
380 | 383 | 1.066143 | CGGGACAATTAGCTGGACAGT | 60.066 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 |
381 | 384 | 1.656652 | CGGGACAATTAGCTGGACAG | 58.343 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
382 | 385 | 0.251916 | CCGGGACAATTAGCTGGACA | 59.748 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
383 | 386 | 0.252197 | ACCGGGACAATTAGCTGGAC | 59.748 | 55.000 | 6.32 | 0.00 | 0.00 | 4.02 |
384 | 387 | 1.868713 | TACCGGGACAATTAGCTGGA | 58.131 | 50.000 | 6.32 | 0.00 | 0.00 | 3.86 |
385 | 388 | 2.561569 | CTTACCGGGACAATTAGCTGG | 58.438 | 52.381 | 6.32 | 0.00 | 0.00 | 4.85 |
386 | 389 | 2.561569 | CCTTACCGGGACAATTAGCTG | 58.438 | 52.381 | 6.32 | 0.00 | 0.00 | 4.24 |
387 | 390 | 1.134189 | GCCTTACCGGGACAATTAGCT | 60.134 | 52.381 | 6.32 | 0.00 | 0.00 | 3.32 |
388 | 391 | 1.134189 | AGCCTTACCGGGACAATTAGC | 60.134 | 52.381 | 6.32 | 0.00 | 0.00 | 3.09 |
389 | 392 | 2.802057 | CGAGCCTTACCGGGACAATTAG | 60.802 | 54.545 | 6.32 | 0.00 | 0.00 | 1.73 |
390 | 393 | 1.137479 | CGAGCCTTACCGGGACAATTA | 59.863 | 52.381 | 6.32 | 0.00 | 0.00 | 1.40 |
391 | 394 | 0.107848 | CGAGCCTTACCGGGACAATT | 60.108 | 55.000 | 6.32 | 0.00 | 0.00 | 2.32 |
392 | 395 | 1.262640 | ACGAGCCTTACCGGGACAAT | 61.263 | 55.000 | 6.32 | 0.00 | 0.00 | 2.71 |
393 | 396 | 0.611618 | TACGAGCCTTACCGGGACAA | 60.612 | 55.000 | 6.32 | 0.00 | 0.00 | 3.18 |
394 | 397 | 1.001020 | TACGAGCCTTACCGGGACA | 60.001 | 57.895 | 6.32 | 0.00 | 0.00 | 4.02 |
395 | 398 | 1.732308 | CTACGAGCCTTACCGGGAC | 59.268 | 63.158 | 6.32 | 0.00 | 0.00 | 4.46 |
396 | 399 | 2.123428 | GCTACGAGCCTTACCGGGA | 61.123 | 63.158 | 6.32 | 0.00 | 34.48 | 5.14 |
397 | 400 | 2.416260 | GCTACGAGCCTTACCGGG | 59.584 | 66.667 | 6.32 | 0.00 | 34.48 | 5.73 |
398 | 401 | 1.226888 | GTGCTACGAGCCTTACCGG | 60.227 | 63.158 | 0.00 | 0.00 | 41.51 | 5.28 |
399 | 402 | 1.226888 | GGTGCTACGAGCCTTACCG | 60.227 | 63.158 | 0.00 | 0.00 | 41.51 | 4.02 |
400 | 403 | 1.226888 | CGGTGCTACGAGCCTTACC | 60.227 | 63.158 | 0.00 | 0.00 | 41.51 | 2.85 |
401 | 404 | 1.805254 | TCGGTGCTACGAGCCTTAC | 59.195 | 57.895 | 0.00 | 0.00 | 41.51 | 2.34 |
402 | 405 | 4.324471 | TCGGTGCTACGAGCCTTA | 57.676 | 55.556 | 0.00 | 0.00 | 41.51 | 2.69 |
423 | 426 | 2.270986 | GGGAGGCTGTTGCAACCAG | 61.271 | 63.158 | 26.14 | 21.85 | 41.91 | 4.00 |
433 | 436 | 0.554792 | ATGAATGAAGGGGGAGGCTG | 59.445 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
436 | 439 | 3.321950 | AGACTATGAATGAAGGGGGAGG | 58.678 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
437 | 440 | 4.164988 | ACAAGACTATGAATGAAGGGGGAG | 59.835 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
439 | 442 | 4.510167 | ACAAGACTATGAATGAAGGGGG | 57.490 | 45.455 | 0.00 | 0.00 | 0.00 | 5.40 |
440 | 443 | 6.240549 | AGTACAAGACTATGAATGAAGGGG | 57.759 | 41.667 | 0.00 | 0.00 | 36.27 | 4.79 |
442 | 445 | 7.981789 | TGCTAAGTACAAGACTATGAATGAAGG | 59.018 | 37.037 | 0.00 | 0.00 | 37.44 | 3.46 |
443 | 446 | 8.932945 | TGCTAAGTACAAGACTATGAATGAAG | 57.067 | 34.615 | 0.00 | 0.00 | 37.44 | 3.02 |
446 | 449 | 9.973450 | AGTATGCTAAGTACAAGACTATGAATG | 57.027 | 33.333 | 0.00 | 0.00 | 37.44 | 2.67 |
447 | 450 | 9.973450 | CAGTATGCTAAGTACAAGACTATGAAT | 57.027 | 33.333 | 0.00 | 0.00 | 37.44 | 2.57 |
448 | 451 | 8.967918 | ACAGTATGCTAAGTACAAGACTATGAA | 58.032 | 33.333 | 0.00 | 0.00 | 42.53 | 2.57 |
449 | 452 | 8.521170 | ACAGTATGCTAAGTACAAGACTATGA | 57.479 | 34.615 | 0.00 | 0.00 | 42.53 | 2.15 |
450 | 453 | 9.885934 | CTACAGTATGCTAAGTACAAGACTATG | 57.114 | 37.037 | 0.00 | 0.00 | 42.53 | 2.23 |
451 | 454 | 9.629878 | ACTACAGTATGCTAAGTACAAGACTAT | 57.370 | 33.333 | 0.00 | 0.00 | 42.53 | 2.12 |
453 | 456 | 7.067251 | GGACTACAGTATGCTAAGTACAAGACT | 59.933 | 40.741 | 0.00 | 0.00 | 42.53 | 3.24 |
454 | 457 | 7.067251 | AGGACTACAGTATGCTAAGTACAAGAC | 59.933 | 40.741 | 9.46 | 0.00 | 42.53 | 3.01 |
455 | 458 | 7.117397 | AGGACTACAGTATGCTAAGTACAAGA | 58.883 | 38.462 | 9.46 | 0.00 | 42.53 | 3.02 |
456 | 459 | 7.336161 | AGGACTACAGTATGCTAAGTACAAG | 57.664 | 40.000 | 9.46 | 0.00 | 42.53 | 3.16 |
458 | 461 | 8.847196 | CAATAGGACTACAGTATGCTAAGTACA | 58.153 | 37.037 | 9.46 | 0.00 | 42.53 | 2.90 |
459 | 462 | 8.848182 | ACAATAGGACTACAGTATGCTAAGTAC | 58.152 | 37.037 | 0.84 | 0.84 | 42.53 | 2.73 |
460 | 463 | 8.991783 | ACAATAGGACTACAGTATGCTAAGTA | 57.008 | 34.615 | 0.00 | 0.00 | 42.53 | 2.24 |
461 | 464 | 7.899648 | ACAATAGGACTACAGTATGCTAAGT | 57.100 | 36.000 | 0.00 | 0.00 | 42.53 | 2.24 |
462 | 465 | 9.601217 | AAAACAATAGGACTACAGTATGCTAAG | 57.399 | 33.333 | 0.00 | 0.00 | 42.53 | 2.18 |
463 | 466 | 9.378551 | CAAAACAATAGGACTACAGTATGCTAA | 57.621 | 33.333 | 0.00 | 0.00 | 42.53 | 3.09 |
466 | 469 | 7.843490 | TCAAAACAATAGGACTACAGTATGC | 57.157 | 36.000 | 0.00 | 0.00 | 42.53 | 3.14 |
497 | 500 | 9.640963 | GCGTATCATATATTGAAGAAGGTAGTT | 57.359 | 33.333 | 0.00 | 0.00 | 38.03 | 2.24 |
499 | 502 | 9.077674 | GTGCGTATCATATATTGAAGAAGGTAG | 57.922 | 37.037 | 0.00 | 0.00 | 38.03 | 3.18 |
500 | 503 | 8.581578 | TGTGCGTATCATATATTGAAGAAGGTA | 58.418 | 33.333 | 0.00 | 0.00 | 38.03 | 3.08 |
501 | 504 | 7.385205 | GTGTGCGTATCATATATTGAAGAAGGT | 59.615 | 37.037 | 0.00 | 0.00 | 38.03 | 3.50 |
502 | 505 | 7.600375 | AGTGTGCGTATCATATATTGAAGAAGG | 59.400 | 37.037 | 0.00 | 0.00 | 38.03 | 3.46 |
503 | 506 | 8.526218 | AGTGTGCGTATCATATATTGAAGAAG | 57.474 | 34.615 | 0.00 | 0.00 | 38.03 | 2.85 |
504 | 507 | 7.326063 | CGAGTGTGCGTATCATATATTGAAGAA | 59.674 | 37.037 | 0.00 | 0.00 | 38.03 | 2.52 |
505 | 508 | 6.801862 | CGAGTGTGCGTATCATATATTGAAGA | 59.198 | 38.462 | 0.00 | 0.00 | 38.03 | 2.87 |
506 | 509 | 6.582672 | ACGAGTGTGCGTATCATATATTGAAG | 59.417 | 38.462 | 0.00 | 0.00 | 43.61 | 3.02 |
507 | 510 | 6.362283 | CACGAGTGTGCGTATCATATATTGAA | 59.638 | 38.462 | 0.00 | 0.00 | 43.59 | 2.69 |
509 | 512 | 6.070846 | CACGAGTGTGCGTATCATATATTG | 57.929 | 41.667 | 0.00 | 0.00 | 43.59 | 1.90 |
524 | 527 | 4.742438 | AAATTTGAATACGCACGAGTGT | 57.258 | 36.364 | 4.12 | 4.12 | 42.14 | 3.55 |
617 | 1019 | 6.656693 | AGTGAGTTTAATGCTTCTGCTAATGT | 59.343 | 34.615 | 0.00 | 0.00 | 40.48 | 2.71 |
618 | 1020 | 7.081526 | AGTGAGTTTAATGCTTCTGCTAATG | 57.918 | 36.000 | 0.00 | 0.00 | 40.48 | 1.90 |
697 | 1100 | 1.592223 | CGGAAGCGAAGAGGAGGTT | 59.408 | 57.895 | 0.00 | 0.00 | 0.00 | 3.50 |
730 | 1133 | 2.539081 | GGAGGGGTCTGGCTGGTTT | 61.539 | 63.158 | 0.00 | 0.00 | 0.00 | 3.27 |
866 | 1271 | 1.541379 | GTTGGAGTAAAATGGGGCGT | 58.459 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
921 | 1342 | 2.515057 | GAGGAGAGCGCGAGAGGA | 60.515 | 66.667 | 12.10 | 0.00 | 0.00 | 3.71 |
928 | 1349 | 2.221906 | TTACGTTGGGAGGAGAGCGC | 62.222 | 60.000 | 0.00 | 0.00 | 0.00 | 5.92 |
1023 | 1462 | 2.200092 | AGGAGGAGCGGGAGGATC | 59.800 | 66.667 | 0.00 | 0.00 | 0.00 | 3.36 |
1206 | 1645 | 3.267860 | GCGAGGCCGATGCTGAAG | 61.268 | 66.667 | 9.31 | 0.00 | 38.22 | 3.02 |
1207 | 1646 | 4.838152 | GGCGAGGCCGATGCTGAA | 62.838 | 66.667 | 15.01 | 0.00 | 39.62 | 3.02 |
1279 | 1718 | 4.070552 | GAAGTCGGCGAGGCAGGT | 62.071 | 66.667 | 11.20 | 0.00 | 0.00 | 4.00 |
1583 | 2022 | 1.272490 | CGGTGAGGTAGAAGCAGTTGA | 59.728 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
1584 | 2023 | 1.000955 | ACGGTGAGGTAGAAGCAGTTG | 59.999 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
1681 | 2120 | 1.536662 | GAGAGGGCGGGGTGGATAT | 60.537 | 63.158 | 0.00 | 0.00 | 0.00 | 1.63 |
1683 | 2122 | 4.414956 | TGAGAGGGCGGGGTGGAT | 62.415 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
1692 | 2131 | 0.398318 | ACTTGGAGTTGTGAGAGGGC | 59.602 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
1698 | 2137 | 3.013921 | GTTGTTGGACTTGGAGTTGTGA | 58.986 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
1701 | 2140 | 1.268539 | GCGTTGTTGGACTTGGAGTTG | 60.269 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
1702 | 2141 | 1.021968 | GCGTTGTTGGACTTGGAGTT | 58.978 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1703 | 2142 | 0.107410 | TGCGTTGTTGGACTTGGAGT | 60.107 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1724 | 2163 | 0.464036 | GATGGTGGTGGCGTAGATGA | 59.536 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
1810 | 2249 | 4.311606 | GTGTGGTTCCTCTTCTTCTTCTC | 58.688 | 47.826 | 0.00 | 0.00 | 0.00 | 2.87 |
2296 | 2744 | 6.363882 | TGACACCATAATGCAGATATTCCAA | 58.636 | 36.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2727 | 3181 | 0.098200 | CAACCATCACATGAGCGCAG | 59.902 | 55.000 | 11.47 | 0.00 | 0.00 | 5.18 |
2772 | 3226 | 0.745845 | CCCCCTCAAGCATCTTCACG | 60.746 | 60.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3175 | 3633 | 2.803956 | TGAACTTAACACCGCTAGTTGC | 59.196 | 45.455 | 0.00 | 0.00 | 31.41 | 4.17 |
3185 | 3643 | 3.437049 | GTCTGGCCTGATGAACTTAACAC | 59.563 | 47.826 | 16.12 | 0.00 | 0.00 | 3.32 |
3200 | 3658 | 2.795329 | TCTTCCTTTTCATGTCTGGCC | 58.205 | 47.619 | 0.00 | 0.00 | 0.00 | 5.36 |
3239 | 3699 | 3.189287 | ACAACTGCTAGCTTCAATTTCCG | 59.811 | 43.478 | 17.23 | 0.00 | 0.00 | 4.30 |
3298 | 3758 | 2.203070 | GCCATCGAATCCTGCCGT | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 5.68 |
3299 | 3759 | 2.099652 | TAGGCCATCGAATCCTGCCG | 62.100 | 60.000 | 5.01 | 0.00 | 46.67 | 5.69 |
3311 | 3771 | 1.065126 | GCAGGAAGACAAGTAGGCCAT | 60.065 | 52.381 | 5.01 | 0.00 | 0.00 | 4.40 |
3504 | 3964 | 1.102978 | AACCGCACTTTCTGCTTTGT | 58.897 | 45.000 | 0.00 | 0.00 | 44.64 | 2.83 |
3593 | 4053 | 3.327757 | TGCAAACTGAATCACCTCTACCT | 59.672 | 43.478 | 0.00 | 0.00 | 0.00 | 3.08 |
3629 | 4089 | 5.543716 | CATTATTTTTCAACACAGCATGCG | 58.456 | 37.500 | 13.01 | 9.99 | 42.53 | 4.73 |
3639 | 4099 | 6.424812 | AGTTCCTTGCTGCATTATTTTTCAAC | 59.575 | 34.615 | 1.84 | 0.00 | 0.00 | 3.18 |
3673 | 4133 | 2.819608 | ACTCAGCAACCAAATAACGCAT | 59.180 | 40.909 | 0.00 | 0.00 | 0.00 | 4.73 |
3674 | 4134 | 2.226330 | ACTCAGCAACCAAATAACGCA | 58.774 | 42.857 | 0.00 | 0.00 | 0.00 | 5.24 |
3675 | 4135 | 2.989422 | ACTCAGCAACCAAATAACGC | 57.011 | 45.000 | 0.00 | 0.00 | 0.00 | 4.84 |
3676 | 4136 | 5.580691 | TCATCTACTCAGCAACCAAATAACG | 59.419 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3727 | 4188 | 2.939103 | GCTAATGCAGTTAGACCACTGG | 59.061 | 50.000 | 15.69 | 0.00 | 43.94 | 4.00 |
3794 | 4255 | 1.669440 | GGGCTATGCATTGGCCATG | 59.331 | 57.895 | 36.79 | 8.63 | 46.87 | 3.66 |
3795 | 4256 | 1.534717 | GGGGCTATGCATTGGCCAT | 60.535 | 57.895 | 39.75 | 7.48 | 46.96 | 4.40 |
3796 | 4257 | 2.123338 | GGGGCTATGCATTGGCCA | 60.123 | 61.111 | 39.75 | 0.00 | 46.96 | 5.36 |
3797 | 4258 | 2.123338 | TGGGGCTATGCATTGGCC | 60.123 | 61.111 | 35.14 | 35.14 | 45.04 | 5.36 |
3798 | 4259 | 2.205152 | CCTGGGGCTATGCATTGGC | 61.205 | 63.158 | 23.20 | 23.20 | 41.68 | 4.52 |
3799 | 4260 | 1.532316 | CCCTGGGGCTATGCATTGG | 60.532 | 63.158 | 3.54 | 0.00 | 0.00 | 3.16 |
3800 | 4261 | 1.111116 | CACCCTGGGGCTATGCATTG | 61.111 | 60.000 | 18.88 | 3.55 | 39.32 | 2.82 |
3801 | 4262 | 1.231068 | CACCCTGGGGCTATGCATT | 59.769 | 57.895 | 18.88 | 0.00 | 39.32 | 3.56 |
3802 | 4263 | 1.070127 | ATCACCCTGGGGCTATGCAT | 61.070 | 55.000 | 18.88 | 3.79 | 39.32 | 3.96 |
3803 | 4264 | 1.697394 | ATCACCCTGGGGCTATGCA | 60.697 | 57.895 | 18.88 | 0.00 | 39.32 | 3.96 |
3804 | 4265 | 1.228367 | CATCACCCTGGGGCTATGC | 60.228 | 63.158 | 18.88 | 0.00 | 39.32 | 3.14 |
3805 | 4266 | 1.228367 | GCATCACCCTGGGGCTATG | 60.228 | 63.158 | 18.88 | 17.03 | 39.32 | 2.23 |
3806 | 4267 | 2.464403 | GGCATCACCCTGGGGCTAT | 61.464 | 63.158 | 18.88 | 4.24 | 39.32 | 2.97 |
3807 | 4268 | 3.096495 | GGCATCACCCTGGGGCTA | 61.096 | 66.667 | 18.88 | 1.65 | 39.32 | 3.93 |
3809 | 4270 | 4.512914 | GAGGCATCACCCTGGGGC | 62.513 | 72.222 | 18.88 | 10.49 | 40.58 | 5.80 |
3810 | 4271 | 3.016971 | TGAGGCATCACCCTGGGG | 61.017 | 66.667 | 18.88 | 7.87 | 40.58 | 4.96 |
3822 | 4283 | 0.181114 | TCCTACATGGCATGTGAGGC | 59.819 | 55.000 | 36.61 | 0.00 | 44.60 | 4.70 |
3823 | 4284 | 2.882761 | CAATCCTACATGGCATGTGAGG | 59.117 | 50.000 | 36.61 | 32.78 | 44.60 | 3.86 |
3824 | 4285 | 2.882761 | CCAATCCTACATGGCATGTGAG | 59.117 | 50.000 | 36.61 | 27.60 | 44.60 | 3.51 |
3825 | 4286 | 2.509131 | TCCAATCCTACATGGCATGTGA | 59.491 | 45.455 | 36.61 | 27.62 | 44.60 | 3.58 |
3826 | 4287 | 2.934887 | TCCAATCCTACATGGCATGTG | 58.065 | 47.619 | 36.61 | 26.16 | 44.60 | 3.21 |
3827 | 4288 | 3.889859 | ATCCAATCCTACATGGCATGT | 57.110 | 42.857 | 33.18 | 33.18 | 46.92 | 3.21 |
3828 | 4289 | 5.072055 | TGTTATCCAATCCTACATGGCATG | 58.928 | 41.667 | 25.31 | 25.31 | 36.62 | 4.06 |
3829 | 4290 | 5.073554 | TCTGTTATCCAATCCTACATGGCAT | 59.926 | 40.000 | 0.00 | 0.00 | 36.62 | 4.40 |
3830 | 4291 | 4.411869 | TCTGTTATCCAATCCTACATGGCA | 59.588 | 41.667 | 0.00 | 0.00 | 36.62 | 4.92 |
3831 | 4292 | 4.973168 | TCTGTTATCCAATCCTACATGGC | 58.027 | 43.478 | 0.00 | 0.00 | 36.62 | 4.40 |
3832 | 4293 | 7.880160 | TTTTCTGTTATCCAATCCTACATGG | 57.120 | 36.000 | 0.00 | 0.00 | 38.09 | 3.66 |
3833 | 4294 | 8.960591 | ACTTTTTCTGTTATCCAATCCTACATG | 58.039 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
3835 | 4296 | 9.667107 | CTACTTTTTCTGTTATCCAATCCTACA | 57.333 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
3836 | 4297 | 9.110502 | CCTACTTTTTCTGTTATCCAATCCTAC | 57.889 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
3837 | 4298 | 8.832735 | ACCTACTTTTTCTGTTATCCAATCCTA | 58.167 | 33.333 | 0.00 | 0.00 | 0.00 | 2.94 |
3838 | 4299 | 7.699878 | ACCTACTTTTTCTGTTATCCAATCCT | 58.300 | 34.615 | 0.00 | 0.00 | 0.00 | 3.24 |
3839 | 4300 | 7.939784 | ACCTACTTTTTCTGTTATCCAATCC | 57.060 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3840 | 4301 | 8.175716 | CGAACCTACTTTTTCTGTTATCCAATC | 58.824 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
3841 | 4302 | 7.120726 | CCGAACCTACTTTTTCTGTTATCCAAT | 59.879 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
3842 | 4303 | 6.428771 | CCGAACCTACTTTTTCTGTTATCCAA | 59.571 | 38.462 | 0.00 | 0.00 | 0.00 | 3.53 |
3843 | 4304 | 5.935789 | CCGAACCTACTTTTTCTGTTATCCA | 59.064 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3844 | 4305 | 6.168389 | TCCGAACCTACTTTTTCTGTTATCC | 58.832 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3845 | 4306 | 7.201617 | CCATCCGAACCTACTTTTTCTGTTATC | 60.202 | 40.741 | 0.00 | 0.00 | 0.00 | 1.75 |
3846 | 4307 | 6.598064 | CCATCCGAACCTACTTTTTCTGTTAT | 59.402 | 38.462 | 0.00 | 0.00 | 0.00 | 1.89 |
3847 | 4308 | 5.935789 | CCATCCGAACCTACTTTTTCTGTTA | 59.064 | 40.000 | 0.00 | 0.00 | 0.00 | 2.41 |
3848 | 4309 | 4.760204 | CCATCCGAACCTACTTTTTCTGTT | 59.240 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
3849 | 4310 | 4.324267 | CCATCCGAACCTACTTTTTCTGT | 58.676 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
3850 | 4311 | 3.689649 | CCCATCCGAACCTACTTTTTCTG | 59.310 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
3851 | 4312 | 3.308188 | CCCCATCCGAACCTACTTTTTCT | 60.308 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
3852 | 4313 | 3.014623 | CCCCATCCGAACCTACTTTTTC | 58.985 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
3853 | 4314 | 2.645797 | TCCCCATCCGAACCTACTTTTT | 59.354 | 45.455 | 0.00 | 0.00 | 0.00 | 1.94 |
3854 | 4315 | 2.271777 | TCCCCATCCGAACCTACTTTT | 58.728 | 47.619 | 0.00 | 0.00 | 0.00 | 2.27 |
3855 | 4316 | 1.961133 | TCCCCATCCGAACCTACTTT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
3856 | 4317 | 1.838077 | CTTCCCCATCCGAACCTACTT | 59.162 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
3857 | 4318 | 1.497161 | CTTCCCCATCCGAACCTACT | 58.503 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3858 | 4319 | 0.179054 | GCTTCCCCATCCGAACCTAC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3859 | 4320 | 1.682451 | CGCTTCCCCATCCGAACCTA | 61.682 | 60.000 | 0.00 | 0.00 | 0.00 | 3.08 |
3860 | 4321 | 2.998949 | GCTTCCCCATCCGAACCT | 59.001 | 61.111 | 0.00 | 0.00 | 0.00 | 3.50 |
3861 | 4322 | 2.513897 | CGCTTCCCCATCCGAACC | 60.514 | 66.667 | 0.00 | 0.00 | 0.00 | 3.62 |
3862 | 4323 | 0.108041 | TAACGCTTCCCCATCCGAAC | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
3863 | 4324 | 0.834612 | ATAACGCTTCCCCATCCGAA | 59.165 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3864 | 4325 | 0.391597 | GATAACGCTTCCCCATCCGA | 59.608 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 |
3865 | 4326 | 0.602905 | GGATAACGCTTCCCCATCCG | 60.603 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
3866 | 4327 | 0.765510 | AGGATAACGCTTCCCCATCC | 59.234 | 55.000 | 0.00 | 0.00 | 36.25 | 3.51 |
3867 | 4328 | 1.694696 | AGAGGATAACGCTTCCCCATC | 59.305 | 52.381 | 0.00 | 0.00 | 33.45 | 3.51 |
3868 | 4329 | 1.694696 | GAGAGGATAACGCTTCCCCAT | 59.305 | 52.381 | 0.00 | 0.00 | 33.45 | 4.00 |
3869 | 4330 | 1.120530 | GAGAGGATAACGCTTCCCCA | 58.879 | 55.000 | 0.00 | 0.00 | 33.45 | 4.96 |
3870 | 4331 | 0.393448 | GGAGAGGATAACGCTTCCCC | 59.607 | 60.000 | 0.00 | 0.00 | 33.45 | 4.81 |
3871 | 4332 | 1.069358 | CTGGAGAGGATAACGCTTCCC | 59.931 | 57.143 | 0.00 | 0.00 | 33.45 | 3.97 |
3872 | 4333 | 1.069358 | CCTGGAGAGGATAACGCTTCC | 59.931 | 57.143 | 0.00 | 0.00 | 42.93 | 3.46 |
3873 | 4334 | 2.032620 | TCCTGGAGAGGATAACGCTTC | 58.967 | 52.381 | 0.00 | 0.00 | 44.13 | 3.86 |
3874 | 4335 | 2.160721 | TCCTGGAGAGGATAACGCTT | 57.839 | 50.000 | 0.00 | 0.00 | 44.13 | 4.68 |
3875 | 4336 | 3.926729 | TCCTGGAGAGGATAACGCT | 57.073 | 52.632 | 0.00 | 0.00 | 44.13 | 5.07 |
3887 | 4348 | 1.641192 | TCTAAGCACTCTCCTCCTGGA | 59.359 | 52.381 | 0.00 | 0.00 | 40.69 | 3.86 |
3888 | 4349 | 2.031120 | CTCTAAGCACTCTCCTCCTGG | 58.969 | 57.143 | 0.00 | 0.00 | 0.00 | 4.45 |
3889 | 4350 | 2.951642 | CTCTCTAAGCACTCTCCTCCTG | 59.048 | 54.545 | 0.00 | 0.00 | 0.00 | 3.86 |
3890 | 4351 | 2.849943 | TCTCTCTAAGCACTCTCCTCCT | 59.150 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3891 | 4352 | 3.290948 | TCTCTCTAAGCACTCTCCTCC | 57.709 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
3892 | 4353 | 5.652994 | TTTTCTCTCTAAGCACTCTCCTC | 57.347 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
3893 | 4354 | 5.542251 | ACTTTTTCTCTCTAAGCACTCTCCT | 59.458 | 40.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3894 | 4355 | 5.637387 | CACTTTTTCTCTCTAAGCACTCTCC | 59.363 | 44.000 | 0.00 | 0.00 | 0.00 | 3.71 |
3895 | 4356 | 6.145371 | CACACTTTTTCTCTCTAAGCACTCTC | 59.855 | 42.308 | 0.00 | 0.00 | 0.00 | 3.20 |
3896 | 4357 | 5.988561 | CACACTTTTTCTCTCTAAGCACTCT | 59.011 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
3897 | 4358 | 5.178438 | CCACACTTTTTCTCTCTAAGCACTC | 59.822 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3898 | 4359 | 5.059833 | CCACACTTTTTCTCTCTAAGCACT | 58.940 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
3899 | 4360 | 4.816925 | ACCACACTTTTTCTCTCTAAGCAC | 59.183 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
3900 | 4361 | 5.036117 | ACCACACTTTTTCTCTCTAAGCA | 57.964 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
3901 | 4362 | 4.452795 | GGACCACACTTTTTCTCTCTAAGC | 59.547 | 45.833 | 0.00 | 0.00 | 0.00 | 3.09 |
3902 | 4363 | 4.686554 | CGGACCACACTTTTTCTCTCTAAG | 59.313 | 45.833 | 0.00 | 0.00 | 0.00 | 2.18 |
3903 | 4364 | 4.342951 | TCGGACCACACTTTTTCTCTCTAA | 59.657 | 41.667 | 0.00 | 0.00 | 0.00 | 2.10 |
3904 | 4365 | 3.893200 | TCGGACCACACTTTTTCTCTCTA | 59.107 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
3905 | 4366 | 2.698797 | TCGGACCACACTTTTTCTCTCT | 59.301 | 45.455 | 0.00 | 0.00 | 0.00 | 3.10 |
3906 | 4367 | 3.107642 | TCGGACCACACTTTTTCTCTC | 57.892 | 47.619 | 0.00 | 0.00 | 0.00 | 3.20 |
3907 | 4368 | 3.403038 | CATCGGACCACACTTTTTCTCT | 58.597 | 45.455 | 0.00 | 0.00 | 0.00 | 3.10 |
3908 | 4369 | 2.095718 | GCATCGGACCACACTTTTTCTC | 60.096 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
3909 | 4370 | 1.880027 | GCATCGGACCACACTTTTTCT | 59.120 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
3910 | 4371 | 1.399727 | CGCATCGGACCACACTTTTTC | 60.400 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
3911 | 4372 | 0.591170 | CGCATCGGACCACACTTTTT | 59.409 | 50.000 | 0.00 | 0.00 | 0.00 | 1.94 |
3912 | 4373 | 0.534203 | ACGCATCGGACCACACTTTT | 60.534 | 50.000 | 0.00 | 0.00 | 0.00 | 2.27 |
3913 | 4374 | 1.070786 | ACGCATCGGACCACACTTT | 59.929 | 52.632 | 0.00 | 0.00 | 0.00 | 2.66 |
3914 | 4375 | 2.741092 | ACGCATCGGACCACACTT | 59.259 | 55.556 | 0.00 | 0.00 | 0.00 | 3.16 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.