Multiple sequence alignment - TraesCS1D01G259900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G259900 chr1D 100.000 2901 0 0 1 2901 353558788 353555888 0.000000e+00 5358.0
1 TraesCS1D01G259900 chr1B 94.922 2619 51 28 13 2593 475471177 475468603 0.000000e+00 4024.0
2 TraesCS1D01G259900 chr1B 96.255 267 5 1 2635 2901 475468602 475468341 1.600000e-117 433.0
3 TraesCS1D01G259900 chr1A 91.410 2107 87 47 1 2068 453524588 453522537 0.000000e+00 2802.0
4 TraesCS1D01G259900 chr1A 93.194 382 19 2 2210 2590 453522152 453521777 3.270000e-154 555.0
5 TraesCS1D01G259900 chr1A 94.465 271 11 1 2635 2901 453521778 453521508 5.780000e-112 414.0
6 TraesCS1D01G259900 chr1A 90.756 119 9 1 2061 2179 453522265 453522149 1.080000e-34 158.0
7 TraesCS1D01G259900 chr1A 93.182 44 1 2 2580 2621 232340433 232340390 2.410000e-06 63.9
8 TraesCS1D01G259900 chr3A 89.141 396 34 7 1030 1422 647755573 647755184 4.350000e-133 484.0
9 TraesCS1D01G259900 chr3D 92.727 330 24 0 1093 1422 511726697 511726368 7.270000e-131 477.0
10 TraesCS1D01G259900 chr3D 83.882 304 45 4 1094 1395 47493584 47493885 1.320000e-73 287.0
11 TraesCS1D01G259900 chr3B 91.515 330 28 0 1093 1422 674063384 674063055 3.410000e-124 455.0
12 TraesCS1D01G259900 chr3B 91.489 47 2 2 2577 2621 256253698 256253744 2.410000e-06 63.9
13 TraesCS1D01G259900 chr4B 84.942 259 35 3 1102 1358 77651296 77651552 2.870000e-65 259.0
14 TraesCS1D01G259900 chr6D 74.035 285 49 20 1098 1368 462273021 462272748 3.080000e-15 93.5
15 TraesCS1D01G259900 chr6D 95.238 42 1 1 2581 2621 382547311 382547352 6.710000e-07 65.8
16 TraesCS1D01G259900 chr6A 73.776 286 48 22 1098 1368 609107554 609107281 1.430000e-13 87.9
17 TraesCS1D01G259900 chr6A 91.489 47 4 0 2575 2621 599809039 599808993 6.710000e-07 65.8
18 TraesCS1D01G259900 chr7A 97.561 41 1 0 2581 2621 94491299 94491339 1.440000e-08 71.3
19 TraesCS1D01G259900 chr5D 95.238 42 0 2 2582 2621 419768139 419768098 6.710000e-07 65.8
20 TraesCS1D01G259900 chr6B 91.489 47 2 2 2576 2621 165433909 165433864 2.410000e-06 63.9
21 TraesCS1D01G259900 chr6B 85.484 62 2 4 2589 2643 171704258 171704319 1.120000e-04 58.4
22 TraesCS1D01G259900 chr2D 95.000 40 1 1 2583 2621 24451839 24451800 8.680000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G259900 chr1D 353555888 353558788 2900 True 5358.00 5358 100.00000 1 2901 1 chr1D.!!$R1 2900
1 TraesCS1D01G259900 chr1B 475468341 475471177 2836 True 2228.50 4024 95.58850 13 2901 2 chr1B.!!$R1 2888
2 TraesCS1D01G259900 chr1A 453521508 453524588 3080 True 982.25 2802 92.45625 1 2901 4 chr1A.!!$R2 2900

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
321 348 0.461135 CCGGCTTTGGATCCATTTGG 59.539 55.0 17.06 9.76 0.0 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1923 1995 1.151668 GCCAAAGATCGATCGATGGG 58.848 55.0 34.08 27.07 37.66 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 0.746659 AACAAACAGCCAAGTGGAGC 59.253 50.000 0.18 0.00 37.39 4.70
51 52 1.283793 CAAACAGCCAAGTGGAGCG 59.716 57.895 0.18 0.00 37.39 5.03
52 53 1.898574 AAACAGCCAAGTGGAGCGG 60.899 57.895 0.18 0.00 37.39 5.52
53 54 2.337879 AAACAGCCAAGTGGAGCGGA 62.338 55.000 0.18 0.00 37.39 5.54
54 55 2.435586 CAGCCAAGTGGAGCGGAG 60.436 66.667 0.18 0.00 37.39 4.63
62 63 2.492484 CAAGTGGAGCGGAGTAACTACT 59.508 50.000 0.00 0.00 39.71 2.57
124 151 4.080638 AGAGAGAGATAAAAGGGCCAGTTG 60.081 45.833 6.18 0.00 0.00 3.16
136 163 3.052082 CAGTTGGGACGCAGCAGG 61.052 66.667 8.99 0.00 0.00 4.85
190 217 1.000496 TCGAGGAGAGGAGGAGGAAA 59.000 55.000 0.00 0.00 0.00 3.13
191 218 1.358103 TCGAGGAGAGGAGGAGGAAAA 59.642 52.381 0.00 0.00 0.00 2.29
192 219 1.754226 CGAGGAGAGGAGGAGGAAAAG 59.246 57.143 0.00 0.00 0.00 2.27
193 220 2.827755 GAGGAGAGGAGGAGGAAAAGT 58.172 52.381 0.00 0.00 0.00 2.66
202 229 4.223255 AGGAGGAGGAAAAGTAAGTAGCAC 59.777 45.833 0.00 0.00 0.00 4.40
265 292 0.754472 AGAAAACTTCGTCCCACGGA 59.246 50.000 0.00 0.00 42.81 4.69
321 348 0.461135 CCGGCTTTGGATCCATTTGG 59.539 55.000 17.06 9.76 0.00 3.28
464 491 5.012768 TGCCTGGCTATTAACTAATCCTACC 59.987 44.000 21.03 0.00 0.00 3.18
465 492 5.248705 GCCTGGCTATTAACTAATCCTACCT 59.751 44.000 12.43 0.00 0.00 3.08
466 493 6.439692 GCCTGGCTATTAACTAATCCTACCTA 59.560 42.308 12.43 0.00 0.00 3.08
467 494 7.579146 GCCTGGCTATTAACTAATCCTACCTAC 60.579 44.444 12.43 0.00 0.00 3.18
593 633 2.106131 TAGTAGCCCATGTGCGCG 59.894 61.111 0.00 0.00 36.02 6.86
607 647 3.434319 CGCGGCAGCCTTGTCAAT 61.434 61.111 10.54 0.00 41.18 2.57
636 693 2.815647 GGCGTGGCGAGAAGGAAG 60.816 66.667 0.00 0.00 0.00 3.46
1509 1578 2.158143 CGCAATTTGCTCGTCTTAACG 58.842 47.619 18.57 0.00 43.10 3.18
2000 2072 9.733219 TTGTTAGGTTTCCGTTTAATTACTTTG 57.267 29.630 0.00 0.00 0.00 2.77
2001 2073 8.901793 TGTTAGGTTTCCGTTTAATTACTTTGT 58.098 29.630 0.00 0.00 0.00 2.83
2002 2074 9.734620 GTTAGGTTTCCGTTTAATTACTTTGTT 57.265 29.630 0.00 0.00 0.00 2.83
2020 2104 2.927477 TGTTAGGTTTCTATTGCGCTCG 59.073 45.455 9.73 0.00 0.00 5.03
2112 2477 2.692041 ACACCAGGAAGCTACCGTATAC 59.308 50.000 0.00 0.00 34.73 1.47
2137 2502 0.513385 GCTGAGATCGATGCATGCAG 59.487 55.000 26.69 13.62 0.00 4.41
2190 2555 1.559682 TGGGGTTTCATAGAGAGGCAC 59.440 52.381 0.00 0.00 0.00 5.01
2368 2733 6.765403 ACACCACTGTGAAATTACTAGCTAA 58.235 36.000 9.86 0.00 45.76 3.09
2375 2740 9.046296 ACTGTGAAATTACTAGCTAATACATGC 57.954 33.333 0.00 0.00 0.00 4.06
2400 2765 1.067000 GCATGCTTTGCCCACACATTA 60.067 47.619 11.37 0.00 46.15 1.90
2460 2825 7.575414 TGAACAATTTCTTAGGCAACTGTAA 57.425 32.000 0.00 0.00 39.19 2.41
2593 2960 8.567948 CATGGTCATGGTAATAAAACATACTCC 58.432 37.037 3.17 0.00 35.24 3.85
2594 2961 7.867921 TGGTCATGGTAATAAAACATACTCCT 58.132 34.615 0.00 0.00 0.00 3.69
2595 2962 7.990886 TGGTCATGGTAATAAAACATACTCCTC 59.009 37.037 0.00 0.00 0.00 3.71
2596 2963 7.444487 GGTCATGGTAATAAAACATACTCCTCC 59.556 40.741 0.00 0.00 0.00 4.30
2597 2964 7.170998 GTCATGGTAATAAAACATACTCCTCCG 59.829 40.741 0.00 0.00 0.00 4.63
2598 2965 6.549433 TGGTAATAAAACATACTCCTCCGT 57.451 37.500 0.00 0.00 0.00 4.69
2599 2966 6.576185 TGGTAATAAAACATACTCCTCCGTC 58.424 40.000 0.00 0.00 0.00 4.79
2600 2967 5.987953 GGTAATAAAACATACTCCTCCGTCC 59.012 44.000 0.00 0.00 0.00 4.79
2601 2968 4.684484 ATAAAACATACTCCTCCGTCCC 57.316 45.455 0.00 0.00 0.00 4.46
2602 2969 1.946984 AAACATACTCCTCCGTCCCA 58.053 50.000 0.00 0.00 0.00 4.37
2603 2970 1.946984 AACATACTCCTCCGTCCCAA 58.053 50.000 0.00 0.00 0.00 4.12
2604 2971 1.946984 ACATACTCCTCCGTCCCAAA 58.053 50.000 0.00 0.00 0.00 3.28
2605 2972 2.262637 ACATACTCCTCCGTCCCAAAA 58.737 47.619 0.00 0.00 0.00 2.44
2606 2973 2.844348 ACATACTCCTCCGTCCCAAAAT 59.156 45.455 0.00 0.00 0.00 1.82
2607 2974 4.035112 ACATACTCCTCCGTCCCAAAATA 58.965 43.478 0.00 0.00 0.00 1.40
2608 2975 4.472108 ACATACTCCTCCGTCCCAAAATAA 59.528 41.667 0.00 0.00 0.00 1.40
2609 2976 3.629142 ACTCCTCCGTCCCAAAATAAG 57.371 47.619 0.00 0.00 0.00 1.73
2610 2977 2.910977 ACTCCTCCGTCCCAAAATAAGT 59.089 45.455 0.00 0.00 0.00 2.24
2611 2978 3.270877 CTCCTCCGTCCCAAAATAAGTG 58.729 50.000 0.00 0.00 0.00 3.16
2612 2979 2.640826 TCCTCCGTCCCAAAATAAGTGT 59.359 45.455 0.00 0.00 0.00 3.55
2613 2980 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
2614 2981 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
2615 2982 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
2616 2983 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
2617 2984 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
2618 2985 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
2619 2986 4.083484 CGTCCCAAAATAAGTGTCTCAACC 60.083 45.833 0.00 0.00 0.00 3.77
2620 2987 5.070685 GTCCCAAAATAAGTGTCTCAACCT 58.929 41.667 0.00 0.00 0.00 3.50
2621 2988 5.048713 GTCCCAAAATAAGTGTCTCAACCTG 60.049 44.000 0.00 0.00 0.00 4.00
2622 2989 4.321230 CCCAAAATAAGTGTCTCAACCTGC 60.321 45.833 0.00 0.00 0.00 4.85
2623 2990 4.466828 CAAAATAAGTGTCTCAACCTGCG 58.533 43.478 0.00 0.00 0.00 5.18
2624 2991 3.678056 AATAAGTGTCTCAACCTGCGA 57.322 42.857 0.00 0.00 0.00 5.10
2625 2992 2.433868 TAAGTGTCTCAACCTGCGAC 57.566 50.000 0.00 0.00 33.05 5.19
2626 2993 0.597637 AAGTGTCTCAACCTGCGACG 60.598 55.000 0.00 0.00 35.03 5.12
2627 2994 2.022129 GTGTCTCAACCTGCGACGG 61.022 63.158 0.00 0.00 35.03 4.79
2628 2995 2.197605 TGTCTCAACCTGCGACGGA 61.198 57.895 0.00 0.00 35.03 4.69
2629 2996 1.444553 GTCTCAACCTGCGACGGAG 60.445 63.158 9.71 9.71 0.00 4.63
2630 2997 2.125912 CTCAACCTGCGACGGAGG 60.126 66.667 31.14 31.14 36.57 4.30
2631 2998 3.649277 CTCAACCTGCGACGGAGGG 62.649 68.421 34.59 20.43 34.56 4.30
2632 2999 3.691342 CAACCTGCGACGGAGGGA 61.691 66.667 34.59 0.00 34.56 4.20
2633 3000 3.382832 AACCTGCGACGGAGGGAG 61.383 66.667 34.59 14.09 34.56 4.30
2726 3097 1.604755 GAGTCGATCTGGATGCGTACT 59.395 52.381 0.00 0.00 0.00 2.73
2871 3242 9.448438 CTCTGCACTCTCTATACTCTATATGTT 57.552 37.037 0.00 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 7.546358 TCTAGCTAGCTATAGTAGTTACTCCG 58.454 42.308 24.36 8.06 37.73 4.63
51 52 8.752187 TCTCTAGCTAGCTATAGTAGTTACTCC 58.248 40.741 27.24 0.00 37.73 3.85
62 63 8.374184 TCTCTGATCTTCTCTAGCTAGCTATA 57.626 38.462 24.36 16.45 0.00 1.31
79 80 5.538053 TCTCTCTCTCTCTCTCTCTCTGATC 59.462 48.000 0.00 0.00 0.00 2.92
124 151 4.840005 GGCTACCTGCTGCGTCCC 62.840 72.222 0.00 0.00 42.39 4.46
136 163 3.718815 CTTCCTCCTCGTATTTGGCTAC 58.281 50.000 0.00 0.00 0.00 3.58
181 208 5.047235 TCTGTGCTACTTACTTTTCCTCCTC 60.047 44.000 0.00 0.00 0.00 3.71
190 217 5.246203 TGAATCACCTCTGTGCTACTTACTT 59.754 40.000 0.00 0.00 42.46 2.24
191 218 4.772624 TGAATCACCTCTGTGCTACTTACT 59.227 41.667 0.00 0.00 42.46 2.24
192 219 5.073311 TGAATCACCTCTGTGCTACTTAC 57.927 43.478 0.00 0.00 42.46 2.34
193 220 4.160439 CCTGAATCACCTCTGTGCTACTTA 59.840 45.833 0.00 0.00 42.46 2.24
202 229 1.738365 CGCTGACCTGAATCACCTCTG 60.738 57.143 0.00 0.00 0.00 3.35
265 292 3.056749 CAGAGTAGAGTACGCACCCTTTT 60.057 47.826 0.00 0.00 0.00 2.27
603 643 1.159285 CGCCAAAGTGAGAGCATTGA 58.841 50.000 0.00 0.00 0.00 2.57
607 647 1.597854 CCACGCCAAAGTGAGAGCA 60.598 57.895 0.00 0.00 44.43 4.26
636 693 3.499918 CCGTCCATGATCCTGATTTTAGC 59.500 47.826 0.00 0.00 0.00 3.09
1161 1222 4.064768 TCCGGCGGGAAGTAGGGA 62.065 66.667 27.98 0.00 40.15 4.20
1410 1471 7.592903 GCGTACATAATTACTACCTGGTACTTC 59.407 40.741 1.49 0.00 0.00 3.01
1509 1578 2.875317 GCCTAGATGCAAAACTAGAGCC 59.125 50.000 20.09 9.58 38.53 4.70
1514 1583 1.209504 AGCCGCCTAGATGCAAAACTA 59.790 47.619 0.00 0.00 0.00 2.24
1687 1756 2.173669 CATCTGAACGGCCGCGAAT 61.174 57.895 28.58 9.39 0.00 3.34
1923 1995 1.151668 GCCAAAGATCGATCGATGGG 58.848 55.000 34.08 27.07 37.66 4.00
2000 2072 2.285660 GCGAGCGCAATAGAAACCTAAC 60.286 50.000 11.47 0.00 41.49 2.34
2001 2073 1.931172 GCGAGCGCAATAGAAACCTAA 59.069 47.619 11.47 0.00 41.49 2.69
2002 2074 1.567504 GCGAGCGCAATAGAAACCTA 58.432 50.000 11.47 0.00 41.49 3.08
2003 2075 2.384203 GCGAGCGCAATAGAAACCT 58.616 52.632 11.47 0.00 41.49 3.50
2004 2076 4.976619 GCGAGCGCAATAGAAACC 57.023 55.556 11.47 0.00 41.49 3.27
2112 2477 3.477899 TGCATCGATCTCAGCGTATAG 57.522 47.619 0.00 0.00 0.00 1.31
2137 2502 7.538334 GCAAAATTAAATCAAGTTGGATTTGCC 59.462 33.333 16.79 0.00 44.77 4.52
2400 2765 9.829507 TTTTTGGTCAGATAAATTGTTCATTGT 57.170 25.926 0.00 0.00 0.00 2.71
2460 2825 4.617253 TGTTTCCTACATGTGCTACACT 57.383 40.909 9.11 0.00 35.11 3.55
2535 2900 4.325028 TGCTGTTTCTTCGGTACTTACA 57.675 40.909 0.00 0.00 0.00 2.41
2593 2960 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
2594 2961 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
2595 2962 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
2596 2963 4.083484 GGTTGAGACACTTATTTTGGGACG 60.083 45.833 0.00 0.00 0.00 4.79
2597 2964 5.048713 CAGGTTGAGACACTTATTTTGGGAC 60.049 44.000 0.00 0.00 0.00 4.46
2598 2965 5.070001 CAGGTTGAGACACTTATTTTGGGA 58.930 41.667 0.00 0.00 0.00 4.37
2599 2966 4.321230 GCAGGTTGAGACACTTATTTTGGG 60.321 45.833 0.00 0.00 0.00 4.12
2600 2967 4.613622 CGCAGGTTGAGACACTTATTTTGG 60.614 45.833 0.00 0.00 0.00 3.28
2601 2968 4.213270 TCGCAGGTTGAGACACTTATTTTG 59.787 41.667 0.00 0.00 0.00 2.44
2602 2969 4.213482 GTCGCAGGTTGAGACACTTATTTT 59.787 41.667 7.86 0.00 44.82 1.82
2603 2970 3.746492 GTCGCAGGTTGAGACACTTATTT 59.254 43.478 7.86 0.00 44.82 1.40
2604 2971 3.326747 GTCGCAGGTTGAGACACTTATT 58.673 45.455 7.86 0.00 44.82 1.40
2605 2972 2.671351 CGTCGCAGGTTGAGACACTTAT 60.671 50.000 12.25 0.00 45.56 1.73
2606 2973 1.335597 CGTCGCAGGTTGAGACACTTA 60.336 52.381 12.25 0.00 45.56 2.24
2607 2974 0.597637 CGTCGCAGGTTGAGACACTT 60.598 55.000 12.25 0.00 45.56 3.16
2608 2975 1.007271 CGTCGCAGGTTGAGACACT 60.007 57.895 12.25 0.00 45.56 3.55
2609 2976 2.022129 CCGTCGCAGGTTGAGACAC 61.022 63.158 12.25 0.00 45.56 3.67
2610 2977 2.142357 CTCCGTCGCAGGTTGAGACA 62.142 60.000 12.25 0.00 45.56 3.41
2611 2978 1.444553 CTCCGTCGCAGGTTGAGAC 60.445 63.158 3.30 3.30 42.55 3.36
2612 2979 2.636412 CCTCCGTCGCAGGTTGAGA 61.636 63.158 0.00 0.00 0.00 3.27
2613 2980 2.125912 CCTCCGTCGCAGGTTGAG 60.126 66.667 0.00 0.00 0.00 3.02
2614 2981 3.691342 CCCTCCGTCGCAGGTTGA 61.691 66.667 0.59 0.00 0.00 3.18
2615 2982 3.649277 CTCCCTCCGTCGCAGGTTG 62.649 68.421 0.59 0.00 0.00 3.77
2616 2983 2.776370 TACTCCCTCCGTCGCAGGTT 62.776 60.000 0.59 0.00 0.00 3.50
2617 2984 2.569218 ATACTCCCTCCGTCGCAGGT 62.569 60.000 0.59 0.00 0.00 4.00
2618 2985 0.536687 TATACTCCCTCCGTCGCAGG 60.537 60.000 0.00 0.00 0.00 4.85
2619 2986 1.469308 GATATACTCCCTCCGTCGCAG 59.531 57.143 0.00 0.00 0.00 5.18
2620 2987 1.073444 AGATATACTCCCTCCGTCGCA 59.927 52.381 0.00 0.00 0.00 5.10
2621 2988 1.823797 AGATATACTCCCTCCGTCGC 58.176 55.000 0.00 0.00 0.00 5.19
2622 2989 6.512342 AATTAAGATATACTCCCTCCGTCG 57.488 41.667 0.00 0.00 0.00 5.12
2623 2990 9.804758 CATAAATTAAGATATACTCCCTCCGTC 57.195 37.037 0.00 0.00 0.00 4.79
2624 2991 9.322769 ACATAAATTAAGATATACTCCCTCCGT 57.677 33.333 0.00 0.00 0.00 4.69
2662 3029 2.687935 ACACTCTTTTTGCATCCAACGT 59.312 40.909 0.00 0.00 0.00 3.99
2663 3030 3.044986 CACACTCTTTTTGCATCCAACG 58.955 45.455 0.00 0.00 0.00 4.10
2664 3031 4.045636 ACACACTCTTTTTGCATCCAAC 57.954 40.909 0.00 0.00 0.00 3.77
2726 3097 7.909641 CACGACATGAAATATCAACTATTGCAA 59.090 33.333 0.00 0.00 38.58 4.08
2871 3242 2.231716 TCAGCTAGCTGTAGGTTGGA 57.768 50.000 36.99 17.85 43.96 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.