Multiple sequence alignment - TraesCS1D01G257200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G257200 chr1D 100.000 6092 0 0 1 6092 349542546 349536455 0.000000e+00 11250.0
1 TraesCS1D01G257200 chr1D 76.786 840 162 30 4196 5020 349254965 349255786 2.020000e-119 440.0
2 TraesCS1D01G257200 chr1D 78.998 419 82 6 3286 3701 349253818 349254233 1.290000e-71 281.0
3 TraesCS1D01G257200 chr1D 91.525 118 10 0 3112 3229 295146289 295146172 4.890000e-36 163.0
4 TraesCS1D01G257200 chr1D 94.118 51 3 0 1893 1943 22557733 22557783 1.820000e-10 78.7
5 TraesCS1D01G257200 chr1B 93.831 2561 96 25 3258 5789 471175448 471172921 0.000000e+00 3797.0
6 TraesCS1D01G257200 chr1B 93.325 1678 74 19 32 1687 471179018 471177357 0.000000e+00 2444.0
7 TraesCS1D01G257200 chr1B 84.448 1286 116 44 1731 2989 471177350 471176122 0.000000e+00 1190.0
8 TraesCS1D01G257200 chr1B 76.777 844 155 34 4196 5020 470912607 470913428 9.380000e-118 435.0
9 TraesCS1D01G257200 chr1B 74.510 816 169 32 3288 4085 471024691 471025485 9.850000e-83 318.0
10 TraesCS1D01G257200 chr1B 88.889 234 18 2 5781 6013 471149571 471149345 1.290000e-71 281.0
11 TraesCS1D01G257200 chr1B 78.897 417 82 6 3288 3701 470911459 470911872 1.670000e-70 278.0
12 TraesCS1D01G257200 chr1B 94.505 91 5 0 3023 3113 471176125 471176035 2.290000e-29 141.0
13 TraesCS1D01G257200 chr1A 95.670 2148 56 13 3248 5373 449822423 449820291 0.000000e+00 3417.0
14 TraesCS1D01G257200 chr1A 89.918 1091 71 15 515 1587 449831634 449830565 0.000000e+00 1369.0
15 TraesCS1D01G257200 chr1A 88.312 616 54 12 5408 6020 449820116 449819516 0.000000e+00 723.0
16 TraesCS1D01G257200 chr1A 92.637 421 20 6 2251 2661 449829903 449829484 4.060000e-166 595.0
17 TraesCS1D01G257200 chr1A 77.088 838 163 26 4196 5020 449624930 449625751 2.000000e-124 457.0
18 TraesCS1D01G257200 chr1A 79.567 416 79 6 3289 3701 449623824 449624236 5.970000e-75 292.0
19 TraesCS1D01G257200 chr1A 88.053 226 24 2 1979 2203 449830214 449829991 1.300000e-66 265.0
20 TraesCS1D01G257200 chr1A 80.000 400 28 16 2647 3022 449822897 449822526 1.310000e-61 248.0
21 TraesCS1D01G257200 chr1A 85.256 156 19 3 32 184 449837051 449836897 2.270000e-34 158.0
22 TraesCS1D01G257200 chr1A 90.291 103 9 1 1728 1829 449830481 449830379 3.830000e-27 134.0
23 TraesCS1D01G257200 chr1A 93.846 65 4 0 1622 1686 449830553 449830489 1.400000e-16 99.0
24 TraesCS1D01G257200 chr1A 91.429 70 5 1 1888 1957 580638444 580638512 1.810000e-15 95.3
25 TraesCS1D01G257200 chr1A 90.164 61 3 2 5352 5412 449820286 449820229 6.550000e-10 76.8
26 TraesCS1D01G257200 chr1A 90.566 53 3 2 393 443 449831714 449831662 1.100000e-07 69.4
27 TraesCS1D01G257200 chr7B 91.525 118 10 0 3112 3229 589467042 589467159 4.890000e-36 163.0
28 TraesCS1D01G257200 chr4A 90.833 120 11 0 3112 3231 589013492 589013611 1.760000e-35 161.0
29 TraesCS1D01G257200 chr4A 97.222 36 1 0 1941 1976 296898606 296898641 1.830000e-05 62.1
30 TraesCS1D01G257200 chr5B 90.164 122 11 1 3108 3229 130916960 130917080 2.270000e-34 158.0
31 TraesCS1D01G257200 chr2D 89.916 119 12 0 3111 3229 215846505 215846387 2.940000e-33 154.0
32 TraesCS1D01G257200 chr7D 89.344 122 12 1 3112 3232 516027265 516027144 1.060000e-32 152.0
33 TraesCS1D01G257200 chr7D 88.710 124 13 1 3106 3229 613622655 613622533 3.800000e-32 150.0
34 TraesCS1D01G257200 chr7D 86.420 81 11 0 1895 1975 87769895 87769815 8.410000e-14 89.8
35 TraesCS1D01G257200 chr5D 89.344 122 12 1 3112 3232 364370105 364370226 1.060000e-32 152.0
36 TraesCS1D01G257200 chr5D 85.227 88 13 0 1888 1975 22585380 22585293 2.340000e-14 91.6
37 TraesCS1D01G257200 chr7A 87.692 130 15 1 3101 3229 356371433 356371304 3.800000e-32 150.0
38 TraesCS1D01G257200 chr3D 89.412 85 8 1 1888 1972 544774444 544774527 8.350000e-19 106.0
39 TraesCS1D01G257200 chr4D 91.429 70 5 1 1888 1957 61140840 61140772 1.810000e-15 95.3
40 TraesCS1D01G257200 chr3B 94.118 51 3 0 1893 1943 60620117 60620067 1.820000e-10 78.7
41 TraesCS1D01G257200 chr3A 83.908 87 9 4 1888 1972 595067827 595067744 1.820000e-10 78.7
42 TraesCS1D01G257200 chr5A 93.750 48 3 0 1905 1952 672322355 672322402 8.470000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G257200 chr1D 349536455 349542546 6091 True 11250.0 11250 100.000000 1 6092 1 chr1D.!!$R2 6091
1 TraesCS1D01G257200 chr1D 349253818 349255786 1968 False 360.5 440 77.892000 3286 5020 2 chr1D.!!$F2 1734
2 TraesCS1D01G257200 chr1B 471172921 471179018 6097 True 1893.0 3797 91.527250 32 5789 4 chr1B.!!$R2 5757
3 TraesCS1D01G257200 chr1B 470911459 470913428 1969 False 356.5 435 77.837000 3288 5020 2 chr1B.!!$F2 1732
4 TraesCS1D01G257200 chr1B 471024691 471025485 794 False 318.0 318 74.510000 3288 4085 1 chr1B.!!$F1 797
5 TraesCS1D01G257200 chr1A 449819516 449822897 3381 True 1116.2 3417 88.536500 2647 6020 4 chr1A.!!$R2 3373
6 TraesCS1D01G257200 chr1A 449829484 449831714 2230 True 421.9 1369 90.885167 393 2661 6 chr1A.!!$R3 2268
7 TraesCS1D01G257200 chr1A 449623824 449625751 1927 False 374.5 457 78.327500 3289 5020 2 chr1A.!!$F2 1731

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
23 24 0.109781 CGTTCAATTTCACGCTGGGG 60.110 55.000 0.00 0.0 0.00 4.96 F
863 882 0.172352 CTCTCCGTTCTCACTCAGCC 59.828 60.000 0.00 0.0 0.00 4.85 F
2235 2365 0.035439 CTTAGATTGGCACGTGGGGT 60.035 55.000 18.88 0.0 0.00 4.95 F
2236 2366 0.035820 TTAGATTGGCACGTGGGGTC 60.036 55.000 18.88 0.0 0.00 4.46 F
2592 2744 0.323302 TGCCGAAGTGTAGCCATCAA 59.677 50.000 0.00 0.0 0.00 2.57 F
3129 3305 0.037046 GTACTCCCTTCGCCCGAAAA 60.037 55.000 4.58 0.0 33.34 2.29 F
3136 3312 0.310854 CTTCGCCCGAAAAAGCTTGT 59.689 50.000 0.00 0.0 33.34 3.16 F
3138 3314 1.081442 CGCCCGAAAAAGCTTGTCC 60.081 57.895 0.00 0.0 0.00 4.02 F
3140 3316 1.179174 GCCCGAAAAAGCTTGTCCCT 61.179 55.000 0.00 0.0 0.00 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1567 1618 0.539986 TTCCACGCTCTTGGGTATCC 59.460 55.000 0.00 0.00 37.60 2.59 R
2770 2942 0.179234 TCCTGCGTCCAAAACAGTCA 59.821 50.000 0.00 0.00 0.00 3.41 R
3107 3283 0.034186 TCGGGCGAAGGGAGTACTTA 60.034 55.000 0.00 0.00 0.00 2.24 R
3118 3294 0.309612 GACAAGCTTTTTCGGGCGAA 59.690 50.000 0.00 0.00 0.00 4.70 R
4146 4912 0.731514 CATGCTGCAGCCGAAAACTG 60.732 55.000 34.64 16.16 41.18 3.16 R
4147 4913 1.582968 CATGCTGCAGCCGAAAACT 59.417 52.632 34.64 8.62 41.18 2.66 R
4278 5263 1.686110 GATCTCCTCCACCCGGTGT 60.686 63.158 16.55 0.00 0.00 4.16 R
5065 6050 2.290071 TGTAGCTTACACCCTTCTTGGC 60.290 50.000 0.00 0.00 32.89 4.52 R
5136 6141 6.984474 TGTTCCTAAACTCTCGGCAATATTAG 59.016 38.462 0.00 0.00 36.30 1.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.980586 TGTTCGTTCAATTTCACGCTG 58.019 42.857 1.91 0.00 36.32 5.18
21 22 2.286713 TGTTCGTTCAATTTCACGCTGG 60.287 45.455 1.91 0.00 36.32 4.85
22 23 0.871722 TCGTTCAATTTCACGCTGGG 59.128 50.000 1.91 0.00 36.32 4.45
23 24 0.109781 CGTTCAATTTCACGCTGGGG 60.110 55.000 0.00 0.00 0.00 4.96
24 25 1.243902 GTTCAATTTCACGCTGGGGA 58.756 50.000 0.00 0.00 0.00 4.81
25 26 1.611491 GTTCAATTTCACGCTGGGGAA 59.389 47.619 0.00 0.00 0.00 3.97
26 27 2.214376 TCAATTTCACGCTGGGGAAT 57.786 45.000 0.00 0.00 0.00 3.01
27 28 1.818060 TCAATTTCACGCTGGGGAATG 59.182 47.619 0.00 0.00 0.00 2.67
28 29 1.818060 CAATTTCACGCTGGGGAATGA 59.182 47.619 0.00 0.00 0.00 2.57
29 30 1.755179 ATTTCACGCTGGGGAATGAG 58.245 50.000 0.00 0.00 0.00 2.90
30 31 0.960364 TTTCACGCTGGGGAATGAGC 60.960 55.000 0.00 0.00 0.00 4.26
31 32 2.046023 CACGCTGGGGAATGAGCA 60.046 61.111 0.00 0.00 34.69 4.26
32 33 1.452651 CACGCTGGGGAATGAGCAT 60.453 57.895 0.00 0.00 34.69 3.79
33 34 1.033746 CACGCTGGGGAATGAGCATT 61.034 55.000 0.00 0.00 34.69 3.56
34 35 0.323725 ACGCTGGGGAATGAGCATTT 60.324 50.000 0.00 0.00 34.69 2.32
168 169 6.494842 TGTTCGTTCAATTTCTTTTGAGGAG 58.505 36.000 0.00 0.00 36.97 3.69
202 203 7.978975 CAGTTCAATTTTTCTTTAGGTGGTCAA 59.021 33.333 0.00 0.00 0.00 3.18
273 274 1.195115 GGAAAGAAGCCCATTTCCCC 58.805 55.000 11.34 0.00 45.79 4.81
361 362 4.582701 TCATTTGAACACCGCTCATTTT 57.417 36.364 0.00 0.00 0.00 1.82
362 363 4.297510 TCATTTGAACACCGCTCATTTTG 58.702 39.130 0.00 0.00 0.00 2.44
428 429 7.397192 AGAGCAACATCCACCTATAAACAATTT 59.603 33.333 0.00 0.00 0.00 1.82
499 500 7.232534 ACAACAAATCCACCACAAGTTACATAT 59.767 33.333 0.00 0.00 0.00 1.78
588 601 2.499693 TGCGCATGCTATATAGGCCTAA 59.500 45.455 18.42 6.84 43.34 2.69
707 723 0.813821 TCGATCTGACAGCAGTGGAG 59.186 55.000 0.00 0.00 42.84 3.86
850 869 1.587054 GACACAGGACACCTCTCCG 59.413 63.158 0.00 0.00 35.20 4.63
863 882 0.172352 CTCTCCGTTCTCACTCAGCC 59.828 60.000 0.00 0.00 0.00 4.85
943 970 1.949847 CTTCCACTGCTCCGGTCGAT 61.950 60.000 0.00 0.00 0.00 3.59
957 987 2.699073 TCGATAGTCGACCGGGAAG 58.301 57.895 13.01 0.00 44.82 3.46
960 990 1.602311 GATAGTCGACCGGGAAGCTA 58.398 55.000 13.01 3.35 0.00 3.32
994 1024 2.660802 GTTCCCGCCGGAGAAGAA 59.339 61.111 5.05 6.03 40.10 2.52
1101 1131 2.173569 GCCCTTCATCCTAGGTGATTGT 59.826 50.000 9.08 0.00 0.00 2.71
1143 1179 2.554462 TCAGTCCAGTTCTGTTCTCTCG 59.446 50.000 0.00 0.00 34.86 4.04
1146 1182 3.053455 GTCCAGTTCTGTTCTCTCGTTG 58.947 50.000 0.00 0.00 0.00 4.10
1151 1187 2.983803 GTTCTGTTCTCTCGTTGAGCTC 59.016 50.000 6.82 6.82 42.38 4.09
1152 1188 2.230660 TCTGTTCTCTCGTTGAGCTCA 58.769 47.619 13.74 13.74 42.38 4.26
1391 1436 5.278266 GCTTCATAACAGTGGCACAAAAGTA 60.278 40.000 21.41 4.80 44.16 2.24
1396 1441 8.200792 TCATAACAGTGGCACAAAAGTAAAATT 58.799 29.630 21.41 0.42 44.16 1.82
1535 1586 4.002267 TGTCGCGAAAAAGAATATGCTG 57.998 40.909 12.06 0.00 0.00 4.41
1547 1598 4.520179 AGAATATGCTGCATGTCTGAACA 58.480 39.130 24.59 2.55 40.38 3.18
1567 1618 2.157834 TTGCTCAGCAATTGCCAAAG 57.842 45.000 26.45 20.44 43.99 2.77
1587 1638 1.141053 GGATACCCAAGAGCGTGGAAT 59.859 52.381 3.95 0.00 41.65 3.01
1609 1660 4.560128 TGCTTAACAAAAAGTGCAACACA 58.440 34.783 0.00 0.00 41.43 3.72
1687 1740 4.454504 TCAAGGATTTTGCCTTCGTACTTC 59.545 41.667 0.00 0.00 44.89 3.01
1689 1742 3.009143 AGGATTTTGCCTTCGTACTTCCT 59.991 43.478 0.00 0.00 33.46 3.36
1690 1743 4.224370 AGGATTTTGCCTTCGTACTTCCTA 59.776 41.667 0.00 0.00 33.46 2.94
1691 1744 4.939439 GGATTTTGCCTTCGTACTTCCTAA 59.061 41.667 0.00 0.00 0.00 2.69
1692 1745 5.589050 GGATTTTGCCTTCGTACTTCCTAAT 59.411 40.000 0.00 0.00 0.00 1.73
1693 1746 6.764560 GGATTTTGCCTTCGTACTTCCTAATA 59.235 38.462 0.00 0.00 0.00 0.98
1694 1747 7.281549 GGATTTTGCCTTCGTACTTCCTAATAA 59.718 37.037 0.00 0.00 0.00 1.40
1695 1748 8.747538 ATTTTGCCTTCGTACTTCCTAATAAT 57.252 30.769 0.00 0.00 0.00 1.28
1696 1749 7.548196 TTTGCCTTCGTACTTCCTAATAATG 57.452 36.000 0.00 0.00 0.00 1.90
1697 1750 5.607477 TGCCTTCGTACTTCCTAATAATGG 58.393 41.667 0.00 0.00 0.00 3.16
1698 1751 5.364446 TGCCTTCGTACTTCCTAATAATGGA 59.636 40.000 0.00 0.00 0.00 3.41
1699 1752 6.042781 TGCCTTCGTACTTCCTAATAATGGAT 59.957 38.462 0.00 0.00 33.09 3.41
1700 1753 6.369065 GCCTTCGTACTTCCTAATAATGGATG 59.631 42.308 0.00 0.00 35.60 3.51
1701 1754 7.667557 CCTTCGTACTTCCTAATAATGGATGA 58.332 38.462 0.00 0.00 34.20 2.92
1702 1755 8.148351 CCTTCGTACTTCCTAATAATGGATGAA 58.852 37.037 0.00 0.00 34.20 2.57
1703 1756 9.542462 CTTCGTACTTCCTAATAATGGATGAAA 57.458 33.333 0.00 0.00 34.20 2.69
1705 1758 9.706691 TCGTACTTCCTAATAATGGATGAAATC 57.293 33.333 0.00 0.00 44.55 2.17
1720 1773 6.934048 GATGAAATCCAGAGGACCTTTAAG 57.066 41.667 0.00 0.00 37.38 1.85
1721 1774 5.843019 TGAAATCCAGAGGACCTTTAAGT 57.157 39.130 0.00 0.00 32.98 2.24
1722 1775 6.945636 TGAAATCCAGAGGACCTTTAAGTA 57.054 37.500 0.00 0.00 32.98 2.24
1723 1776 6.947464 TGAAATCCAGAGGACCTTTAAGTAG 58.053 40.000 0.00 0.00 32.98 2.57
1724 1777 6.500751 TGAAATCCAGAGGACCTTTAAGTAGT 59.499 38.462 0.00 0.00 32.98 2.73
1725 1778 5.941555 ATCCAGAGGACCTTTAAGTAGTG 57.058 43.478 0.00 0.00 32.98 2.74
1726 1779 4.094476 TCCAGAGGACCTTTAAGTAGTGG 58.906 47.826 0.00 0.00 0.00 4.00
1727 1780 3.838903 CCAGAGGACCTTTAAGTAGTGGT 59.161 47.826 0.00 0.00 35.23 4.16
1728 1781 4.286291 CCAGAGGACCTTTAAGTAGTGGTT 59.714 45.833 0.00 0.00 32.30 3.67
1729 1782 5.238583 CAGAGGACCTTTAAGTAGTGGTTG 58.761 45.833 0.00 0.00 32.30 3.77
1730 1783 4.906060 AGAGGACCTTTAAGTAGTGGTTGT 59.094 41.667 0.00 0.00 32.30 3.32
1731 1784 5.368816 AGAGGACCTTTAAGTAGTGGTTGTT 59.631 40.000 0.00 0.00 32.30 2.83
1732 1785 5.374071 AGGACCTTTAAGTAGTGGTTGTTG 58.626 41.667 0.00 0.00 32.30 3.33
1733 1786 5.104235 AGGACCTTTAAGTAGTGGTTGTTGT 60.104 40.000 0.00 0.00 32.30 3.32
1734 1787 5.591472 GGACCTTTAAGTAGTGGTTGTTGTT 59.409 40.000 0.00 0.00 32.30 2.83
1735 1788 6.445357 ACCTTTAAGTAGTGGTTGTTGTTG 57.555 37.500 0.00 0.00 0.00 3.33
1736 1789 5.163591 ACCTTTAAGTAGTGGTTGTTGTTGC 60.164 40.000 0.00 0.00 0.00 4.17
1737 1790 5.067283 CCTTTAAGTAGTGGTTGTTGTTGCT 59.933 40.000 0.00 0.00 0.00 3.91
1738 1791 5.493133 TTAAGTAGTGGTTGTTGTTGCTG 57.507 39.130 0.00 0.00 0.00 4.41
1753 1806 5.236655 TGTTGCTGTTTACGTTCATTCAA 57.763 34.783 0.00 0.00 0.00 2.69
1758 1811 5.918011 TGCTGTTTACGTTCATTCAAATTCC 59.082 36.000 0.00 0.00 0.00 3.01
1792 1845 5.390461 GCGACTTATCACAAGTGCATAACAA 60.390 40.000 0.00 0.00 0.00 2.83
1819 1872 6.691754 TCTACTTTCTGCATGTTGAAACAA 57.308 33.333 0.00 0.00 43.03 2.83
1820 1873 7.275888 TCTACTTTCTGCATGTTGAAACAAT 57.724 32.000 0.00 4.13 43.03 2.71
1821 1874 7.362662 TCTACTTTCTGCATGTTGAAACAATC 58.637 34.615 0.00 0.00 43.03 2.67
1822 1875 6.152932 ACTTTCTGCATGTTGAAACAATCT 57.847 33.333 0.00 0.00 43.03 2.40
1823 1876 6.576185 ACTTTCTGCATGTTGAAACAATCTT 58.424 32.000 0.00 0.00 43.03 2.40
1824 1877 6.698766 ACTTTCTGCATGTTGAAACAATCTTC 59.301 34.615 0.00 0.00 43.03 2.87
1825 1878 5.771153 TCTGCATGTTGAAACAATCTTCA 57.229 34.783 0.00 0.00 43.03 3.02
1826 1879 5.522456 TCTGCATGTTGAAACAATCTTCAC 58.478 37.500 0.00 0.00 43.03 3.18
1827 1880 5.067544 TCTGCATGTTGAAACAATCTTCACA 59.932 36.000 0.00 0.00 43.03 3.58
1828 1881 5.042593 TGCATGTTGAAACAATCTTCACAC 58.957 37.500 0.00 0.00 43.03 3.82
1829 1882 5.042593 GCATGTTGAAACAATCTTCACACA 58.957 37.500 0.00 0.00 43.03 3.72
1830 1883 5.519566 GCATGTTGAAACAATCTTCACACAA 59.480 36.000 0.00 0.00 43.03 3.33
1831 1884 6.035866 GCATGTTGAAACAATCTTCACACAAA 59.964 34.615 0.00 0.00 43.03 2.83
1832 1885 7.614908 CATGTTGAAACAATCTTCACACAAAG 58.385 34.615 0.00 0.00 43.03 2.77
1833 1886 6.918626 TGTTGAAACAATCTTCACACAAAGA 58.081 32.000 0.00 0.00 35.07 2.52
1834 1887 7.374272 TGTTGAAACAATCTTCACACAAAGAA 58.626 30.769 0.00 0.00 35.02 2.52
1835 1888 7.869937 TGTTGAAACAATCTTCACACAAAGAAA 59.130 29.630 0.00 0.00 35.02 2.52
1836 1889 7.810766 TGAAACAATCTTCACACAAAGAAAC 57.189 32.000 0.00 0.00 38.69 2.78
1837 1890 7.374272 TGAAACAATCTTCACACAAAGAAACA 58.626 30.769 0.00 0.00 38.69 2.83
1874 1927 3.124128 GTGTTTACTGTTAGGTTAGCGGC 59.876 47.826 0.00 0.00 0.00 6.53
1882 1935 3.181469 TGTTAGGTTAGCGGCATTAGGAG 60.181 47.826 1.45 0.00 0.00 3.69
1883 1936 0.759346 AGGTTAGCGGCATTAGGAGG 59.241 55.000 1.45 0.00 0.00 4.30
1891 1982 2.515854 CGGCATTAGGAGGAGCTACTA 58.484 52.381 0.00 0.00 0.00 1.82
1908 1999 7.419172 GGAGCTACTACCTCTGTTCCAAAATAT 60.419 40.741 0.00 0.00 31.50 1.28
1910 2001 8.989131 AGCTACTACCTCTGTTCCAAAATATAA 58.011 33.333 0.00 0.00 0.00 0.98
1914 2005 9.838339 ACTACCTCTGTTCCAAAATATAAGATG 57.162 33.333 0.00 0.00 0.00 2.90
1915 2006 9.838339 CTACCTCTGTTCCAAAATATAAGATGT 57.162 33.333 0.00 0.00 0.00 3.06
1917 2008 9.533831 ACCTCTGTTCCAAAATATAAGATGTTT 57.466 29.630 0.00 0.00 0.00 2.83
1938 2029 8.612233 TGTTTTTGCAATTCAATTTAAACTGC 57.388 26.923 16.00 3.88 35.50 4.40
1939 2030 8.239314 TGTTTTTGCAATTCAATTTAAACTGCA 58.761 25.926 16.00 7.89 35.50 4.41
1940 2031 9.070149 GTTTTTGCAATTCAATTTAAACTGCAA 57.930 25.926 15.73 15.73 44.16 4.08
1944 2035 9.798994 TTGCAATTCAATTTAAACTGCAAAAAT 57.201 22.222 16.70 0.00 43.23 1.82
1977 2074 2.445905 TGATACGGAGGGAGTAGATGGT 59.554 50.000 0.00 0.00 0.00 3.55
2057 2157 1.150081 CCCTGCCCCATGTCATCTC 59.850 63.158 0.00 0.00 0.00 2.75
2062 2162 1.842007 CCCCATGTCATCTCCCCTG 59.158 63.158 0.00 0.00 0.00 4.45
2080 2180 2.929398 CCTGAAGCAAACACCACAAAAC 59.071 45.455 0.00 0.00 0.00 2.43
2087 2187 1.587933 AACACCACAAAACACGCCGT 61.588 50.000 0.00 0.00 0.00 5.68
2088 2188 1.585002 CACCACAAAACACGCCGTG 60.585 57.895 16.94 16.94 39.75 4.94
2103 2203 2.541999 CGCCGTGTTTTGGTTACAACAT 60.542 45.455 0.00 0.00 35.40 2.71
2118 2218 9.398538 TGGTTACAACATAATTTATACCCTGTC 57.601 33.333 0.00 0.00 0.00 3.51
2119 2219 9.398538 GGTTACAACATAATTTATACCCTGTCA 57.601 33.333 0.00 0.00 0.00 3.58
2131 2231 3.258722 ACCCTGTCACATCCCAAATTT 57.741 42.857 0.00 0.00 0.00 1.82
2137 2237 3.956848 TGTCACATCCCAAATTTCACACA 59.043 39.130 0.00 0.00 0.00 3.72
2145 2245 9.571816 ACATCCCAAATTTCACACAAAATATTT 57.428 25.926 0.00 0.00 0.00 1.40
2166 2266 4.314740 TCAAACCTGGAAAATTTGTCCG 57.685 40.909 0.00 0.00 38.06 4.79
2171 2272 5.545063 ACCTGGAAAATTTGTCCGAATTT 57.455 34.783 0.00 0.33 40.06 1.82
2179 2280 7.361116 GGAAAATTTGTCCGAATTTGCATGAAT 60.361 33.333 11.24 0.00 38.75 2.57
2223 2353 3.454858 TCTGCTGAACCTCCCTTAGATT 58.545 45.455 0.00 0.00 0.00 2.40
2229 2359 0.541863 ACCTCCCTTAGATTGGCACG 59.458 55.000 0.00 0.00 0.00 5.34
2230 2360 0.541863 CCTCCCTTAGATTGGCACGT 59.458 55.000 0.00 0.00 0.00 4.49
2232 2362 0.251916 TCCCTTAGATTGGCACGTGG 59.748 55.000 18.88 0.00 0.00 4.94
2233 2363 0.748005 CCCTTAGATTGGCACGTGGG 60.748 60.000 18.88 6.20 0.00 4.61
2234 2364 0.748005 CCTTAGATTGGCACGTGGGG 60.748 60.000 18.88 0.00 0.00 4.96
2235 2365 0.035439 CTTAGATTGGCACGTGGGGT 60.035 55.000 18.88 0.00 0.00 4.95
2236 2366 0.035820 TTAGATTGGCACGTGGGGTC 60.036 55.000 18.88 0.00 0.00 4.46
2237 2367 0.907704 TAGATTGGCACGTGGGGTCT 60.908 55.000 18.88 0.00 0.00 3.85
2238 2368 1.303317 GATTGGCACGTGGGGTCTT 60.303 57.895 18.88 0.00 0.00 3.01
2240 2370 0.469144 ATTGGCACGTGGGGTCTTTT 60.469 50.000 18.88 0.00 0.00 2.27
2241 2371 0.684805 TTGGCACGTGGGGTCTTTTT 60.685 50.000 18.88 0.00 0.00 1.94
2270 2412 1.670811 GGCACATGGTCTAACATTCCG 59.329 52.381 0.00 0.00 0.00 4.30
2275 2417 2.107950 TGGTCTAACATTCCGGCAAG 57.892 50.000 0.00 0.00 0.00 4.01
2289 2438 2.223021 CCGGCAAGATACAAATGTGTCG 60.223 50.000 0.00 0.00 40.49 4.35
2305 2454 7.696992 AATGTGTCGTAATAAAAATCAGGGT 57.303 32.000 0.00 0.00 0.00 4.34
2306 2455 6.489127 TGTGTCGTAATAAAAATCAGGGTG 57.511 37.500 0.00 0.00 0.00 4.61
2327 2476 5.359860 GGTGAACCCTTTCTTTTCTTCAGAA 59.640 40.000 0.00 0.00 32.36 3.02
2547 2699 5.512060 CCTGGCTAGCAGCATAAGAATCTTA 60.512 44.000 18.24 5.07 44.75 2.10
2592 2744 0.323302 TGCCGAAGTGTAGCCATCAA 59.677 50.000 0.00 0.00 0.00 2.57
2664 2816 3.059393 CCGAACCTTTACGACTTTTGACC 60.059 47.826 0.00 0.00 0.00 4.02
2679 2834 0.454600 TGACCGGTCGATGCTACTTC 59.545 55.000 28.70 2.14 0.00 3.01
2699 2854 5.532406 ACTTCATAGTGAGTGTGCAATGTTT 59.468 36.000 0.00 0.00 31.99 2.83
2741 2896 8.320338 AGGTAATTCCTAGCTACTTGTAATGT 57.680 34.615 0.00 0.00 46.10 2.71
2742 2897 9.430399 AGGTAATTCCTAGCTACTTGTAATGTA 57.570 33.333 0.00 0.00 46.10 2.29
2746 2901 9.780186 AATTCCTAGCTACTTGTAATGTAATCC 57.220 33.333 0.00 0.00 0.00 3.01
2753 2908 9.515226 AGCTACTTGTAATGTAATCCTCAAAAA 57.485 29.630 0.00 0.00 0.00 1.94
2790 2962 0.868406 GACTGTTTTGGACGCAGGAG 59.132 55.000 0.00 0.00 34.79 3.69
2795 2967 3.482436 TGTTTTGGACGCAGGAGTATTT 58.518 40.909 0.00 0.00 0.00 1.40
2833 3005 2.433334 CGCGTGAGATTTCGACGCA 61.433 57.895 22.78 0.00 45.49 5.24
2841 3013 2.069273 AGATTTCGACGCAACCAAGAG 58.931 47.619 0.00 0.00 0.00 2.85
2906 3082 7.276088 AGCATCCCCTATTCATGTATACAAT 57.724 36.000 10.14 1.64 0.00 2.71
3002 3178 4.321718 CATCTGGATTATCATCGTTGCCT 58.678 43.478 0.00 0.00 0.00 4.75
3003 3179 4.422073 TCTGGATTATCATCGTTGCCTT 57.578 40.909 0.00 0.00 0.00 4.35
3004 3180 4.780815 TCTGGATTATCATCGTTGCCTTT 58.219 39.130 0.00 0.00 0.00 3.11
3005 3181 5.192927 TCTGGATTATCATCGTTGCCTTTT 58.807 37.500 0.00 0.00 0.00 2.27
3006 3182 5.296780 TCTGGATTATCATCGTTGCCTTTTC 59.703 40.000 0.00 0.00 0.00 2.29
3007 3183 5.192927 TGGATTATCATCGTTGCCTTTTCT 58.807 37.500 0.00 0.00 0.00 2.52
3008 3184 5.652014 TGGATTATCATCGTTGCCTTTTCTT 59.348 36.000 0.00 0.00 0.00 2.52
3009 3185 6.826231 TGGATTATCATCGTTGCCTTTTCTTA 59.174 34.615 0.00 0.00 0.00 2.10
3010 3186 7.132863 GGATTATCATCGTTGCCTTTTCTTAC 58.867 38.462 0.00 0.00 0.00 2.34
3011 3187 7.201696 GGATTATCATCGTTGCCTTTTCTTACA 60.202 37.037 0.00 0.00 0.00 2.41
3012 3188 7.624360 TTATCATCGTTGCCTTTTCTTACAT 57.376 32.000 0.00 0.00 0.00 2.29
3013 3189 8.725405 TTATCATCGTTGCCTTTTCTTACATA 57.275 30.769 0.00 0.00 0.00 2.29
3014 3190 7.807977 ATCATCGTTGCCTTTTCTTACATAT 57.192 32.000 0.00 0.00 0.00 1.78
3015 3191 7.624360 TCATCGTTGCCTTTTCTTACATATT 57.376 32.000 0.00 0.00 0.00 1.28
3016 3192 8.725405 TCATCGTTGCCTTTTCTTACATATTA 57.275 30.769 0.00 0.00 0.00 0.98
3017 3193 9.337396 TCATCGTTGCCTTTTCTTACATATTAT 57.663 29.630 0.00 0.00 0.00 1.28
3037 3213 7.969536 ATTATAGAAGGATCACAATTGGTCG 57.030 36.000 10.83 0.00 33.05 4.79
3107 3283 6.600882 AAGCAAAGATTGTGATTCTGGAAT 57.399 33.333 0.00 0.00 0.00 3.01
3113 3289 9.994432 CAAAGATTGTGATTCTGGAATAAGTAC 57.006 33.333 0.00 0.00 0.00 2.73
3115 3291 9.606631 AAGATTGTGATTCTGGAATAAGTACTC 57.393 33.333 0.00 0.00 0.00 2.59
3116 3292 8.207545 AGATTGTGATTCTGGAATAAGTACTCC 58.792 37.037 0.00 0.00 0.00 3.85
3117 3293 6.235231 TGTGATTCTGGAATAAGTACTCCC 57.765 41.667 0.00 0.00 0.00 4.30
3118 3294 5.964477 TGTGATTCTGGAATAAGTACTCCCT 59.036 40.000 0.00 0.00 0.00 4.20
3119 3295 6.443849 TGTGATTCTGGAATAAGTACTCCCTT 59.556 38.462 0.00 0.00 0.00 3.95
3121 3297 5.593679 TTCTGGAATAAGTACTCCCTTCG 57.406 43.478 0.00 0.00 0.00 3.79
3122 3298 3.383825 TCTGGAATAAGTACTCCCTTCGC 59.616 47.826 0.00 0.00 0.00 4.70
3123 3299 2.433239 TGGAATAAGTACTCCCTTCGCC 59.567 50.000 0.00 0.00 0.00 5.54
3124 3300 2.224233 GGAATAAGTACTCCCTTCGCCC 60.224 54.545 0.00 0.00 0.00 6.13
3125 3301 1.038280 ATAAGTACTCCCTTCGCCCG 58.962 55.000 0.00 0.00 0.00 6.13
3127 3303 0.901580 AAGTACTCCCTTCGCCCGAA 60.902 55.000 0.00 2.92 0.00 4.30
3128 3304 0.901580 AGTACTCCCTTCGCCCGAAA 60.902 55.000 4.58 0.00 33.34 3.46
3129 3305 0.037046 GTACTCCCTTCGCCCGAAAA 60.037 55.000 4.58 0.00 33.34 2.29
3130 3306 0.686224 TACTCCCTTCGCCCGAAAAA 59.314 50.000 4.58 0.00 33.34 1.94
3131 3307 0.605589 ACTCCCTTCGCCCGAAAAAG 60.606 55.000 4.58 5.07 33.34 2.27
3132 3308 1.923227 CTCCCTTCGCCCGAAAAAGC 61.923 60.000 4.58 0.00 33.34 3.51
3133 3309 1.971695 CCCTTCGCCCGAAAAAGCT 60.972 57.895 4.58 0.00 33.34 3.74
3134 3310 1.524008 CCCTTCGCCCGAAAAAGCTT 61.524 55.000 4.58 0.00 33.34 3.74
3135 3311 0.387239 CCTTCGCCCGAAAAAGCTTG 60.387 55.000 0.00 0.00 33.34 4.01
3136 3312 0.310854 CTTCGCCCGAAAAAGCTTGT 59.689 50.000 0.00 0.00 33.34 3.16
3138 3314 1.081442 CGCCCGAAAAAGCTTGTCC 60.081 57.895 0.00 0.00 0.00 4.02
3139 3315 1.289066 GCCCGAAAAAGCTTGTCCC 59.711 57.895 0.00 0.00 0.00 4.46
3140 3316 1.179174 GCCCGAAAAAGCTTGTCCCT 61.179 55.000 0.00 0.00 0.00 4.20
3141 3317 1.328279 CCCGAAAAAGCTTGTCCCTT 58.672 50.000 0.00 0.00 0.00 3.95
3142 3318 2.510613 CCCGAAAAAGCTTGTCCCTTA 58.489 47.619 0.00 0.00 0.00 2.69
3143 3319 2.888414 CCCGAAAAAGCTTGTCCCTTAA 59.112 45.455 0.00 0.00 0.00 1.85
3144 3320 3.319689 CCCGAAAAAGCTTGTCCCTTAAA 59.680 43.478 0.00 0.00 0.00 1.52
3145 3321 4.021456 CCCGAAAAAGCTTGTCCCTTAAAT 60.021 41.667 0.00 0.00 0.00 1.40
3146 3322 4.923281 CCGAAAAAGCTTGTCCCTTAAATG 59.077 41.667 0.00 0.00 0.00 2.32
3147 3323 4.923281 CGAAAAAGCTTGTCCCTTAAATGG 59.077 41.667 0.00 0.00 0.00 3.16
3148 3324 5.278758 CGAAAAAGCTTGTCCCTTAAATGGA 60.279 40.000 0.00 0.00 0.00 3.41
3149 3325 6.572314 CGAAAAAGCTTGTCCCTTAAATGGAT 60.572 38.462 0.00 0.00 33.65 3.41
3150 3326 5.665916 AAAGCTTGTCCCTTAAATGGATG 57.334 39.130 0.00 0.00 33.65 3.51
3151 3327 4.322057 AGCTTGTCCCTTAAATGGATGT 57.678 40.909 0.00 0.00 33.65 3.06
3152 3328 5.450818 AGCTTGTCCCTTAAATGGATGTA 57.549 39.130 0.00 0.00 33.65 2.29
3153 3329 6.018433 AGCTTGTCCCTTAAATGGATGTAT 57.982 37.500 0.00 0.00 33.65 2.29
3154 3330 6.435164 AGCTTGTCCCTTAAATGGATGTATT 58.565 36.000 0.00 0.00 33.65 1.89
3155 3331 6.897413 AGCTTGTCCCTTAAATGGATGTATTT 59.103 34.615 0.00 0.00 33.65 1.40
3156 3332 8.058847 AGCTTGTCCCTTAAATGGATGTATTTA 58.941 33.333 0.00 0.00 33.65 1.40
3157 3333 8.352942 GCTTGTCCCTTAAATGGATGTATTTAG 58.647 37.037 0.00 0.00 34.87 1.85
3158 3334 7.817418 TGTCCCTTAAATGGATGTATTTAGC 57.183 36.000 0.00 0.00 34.87 3.09
3159 3335 7.350382 TGTCCCTTAAATGGATGTATTTAGCA 58.650 34.615 0.00 0.00 34.87 3.49
3160 3336 7.284489 TGTCCCTTAAATGGATGTATTTAGCAC 59.716 37.037 0.00 0.00 34.87 4.40
3161 3337 6.775629 TCCCTTAAATGGATGTATTTAGCACC 59.224 38.462 0.00 0.00 34.87 5.01
3162 3338 6.549364 CCCTTAAATGGATGTATTTAGCACCA 59.451 38.462 0.00 0.00 34.87 4.17
3163 3339 7.069331 CCCTTAAATGGATGTATTTAGCACCAA 59.931 37.037 0.00 0.00 34.87 3.67
3164 3340 8.137437 CCTTAAATGGATGTATTTAGCACCAAG 58.863 37.037 0.00 0.00 34.87 3.61
3165 3341 8.588290 TTAAATGGATGTATTTAGCACCAAGT 57.412 30.769 0.00 0.00 34.87 3.16
3166 3342 7.480760 AAATGGATGTATTTAGCACCAAGTT 57.519 32.000 0.00 0.00 0.00 2.66
3167 3343 8.588290 AAATGGATGTATTTAGCACCAAGTTA 57.412 30.769 0.00 0.00 0.00 2.24
3168 3344 7.807977 ATGGATGTATTTAGCACCAAGTTAG 57.192 36.000 0.00 0.00 0.00 2.34
3169 3345 6.717289 TGGATGTATTTAGCACCAAGTTAGT 58.283 36.000 0.00 0.00 0.00 2.24
3170 3346 7.853299 TGGATGTATTTAGCACCAAGTTAGTA 58.147 34.615 0.00 0.00 0.00 1.82
3171 3347 7.767198 TGGATGTATTTAGCACCAAGTTAGTAC 59.233 37.037 0.00 0.00 0.00 2.73
3172 3348 7.985752 GGATGTATTTAGCACCAAGTTAGTACT 59.014 37.037 0.00 0.00 35.68 2.73
3175 3351 9.246670 TGTATTTAGCACCAAGTTAGTACTAGA 57.753 33.333 2.23 0.00 33.17 2.43
3179 3355 8.812513 TTAGCACCAAGTTAGTACTAGATACA 57.187 34.615 2.23 0.00 36.09 2.29
3180 3356 7.899648 AGCACCAAGTTAGTACTAGATACAT 57.100 36.000 2.23 0.00 36.09 2.29
3181 3357 7.942990 AGCACCAAGTTAGTACTAGATACATC 58.057 38.462 2.23 0.00 36.09 3.06
3182 3358 7.014422 AGCACCAAGTTAGTACTAGATACATCC 59.986 40.741 2.23 0.00 36.09 3.51
3183 3359 7.201884 GCACCAAGTTAGTACTAGATACATCCA 60.202 40.741 2.23 0.00 36.09 3.41
3184 3360 8.861086 CACCAAGTTAGTACTAGATACATCCAT 58.139 37.037 2.23 0.00 36.09 3.41
3185 3361 9.080097 ACCAAGTTAGTACTAGATACATCCATC 57.920 37.037 2.23 0.00 36.09 3.51
3186 3362 9.303116 CCAAGTTAGTACTAGATACATCCATCT 57.697 37.037 2.23 0.00 38.76 2.90
3191 3367 9.976776 TTAGTACTAGATACATCCATCTAAGGG 57.023 37.037 2.23 0.00 37.14 3.95
3192 3368 8.233349 AGTACTAGATACATCCATCTAAGGGA 57.767 38.462 0.00 0.00 37.14 4.20
3193 3369 8.110908 AGTACTAGATACATCCATCTAAGGGAC 58.889 40.741 0.00 0.00 37.14 4.46
3194 3370 6.864421 ACTAGATACATCCATCTAAGGGACA 58.136 40.000 0.00 0.00 37.14 4.02
3195 3371 7.306013 ACTAGATACATCCATCTAAGGGACAA 58.694 38.462 0.00 0.00 37.14 3.18
3196 3372 7.789831 ACTAGATACATCCATCTAAGGGACAAA 59.210 37.037 0.00 0.00 37.14 2.83
3197 3373 6.831976 AGATACATCCATCTAAGGGACAAAC 58.168 40.000 0.00 0.00 37.23 2.93
3198 3374 6.617371 AGATACATCCATCTAAGGGACAAACT 59.383 38.462 0.00 0.00 37.23 2.66
3199 3375 5.520748 ACATCCATCTAAGGGACAAACTT 57.479 39.130 0.00 0.00 37.23 2.66
3200 3376 5.256474 ACATCCATCTAAGGGACAAACTTG 58.744 41.667 0.00 0.00 37.23 3.16
3201 3377 4.301072 TCCATCTAAGGGACAAACTTGG 57.699 45.455 0.00 0.00 0.00 3.61
3202 3378 3.010138 TCCATCTAAGGGACAAACTTGGG 59.990 47.826 0.00 0.00 0.00 4.12
3203 3379 3.010138 CCATCTAAGGGACAAACTTGGGA 59.990 47.826 0.00 0.00 0.00 4.37
3204 3380 3.782656 TCTAAGGGACAAACTTGGGAC 57.217 47.619 0.00 0.00 0.00 4.46
3205 3381 3.050089 TCTAAGGGACAAACTTGGGACA 58.950 45.455 0.00 0.00 0.00 4.02
3232 3408 1.972872 TCGGACGGAGGGAGTAATAC 58.027 55.000 0.00 0.00 0.00 1.89
3238 3419 4.381932 GGACGGAGGGAGTAATACGAAAAA 60.382 45.833 0.00 0.00 0.00 1.94
3839 4602 1.519455 CATCCAGGAGAACGTCGGC 60.519 63.158 0.00 0.00 0.00 5.54
3878 4641 2.350458 GCCCACCATCGCCATGTTT 61.350 57.895 0.00 0.00 0.00 2.83
3884 4647 1.501292 CATCGCCATGTTTGTCGCA 59.499 52.632 0.00 0.00 0.00 5.10
3905 4668 3.060020 GATCGGCTTCGTGTCCGGA 62.060 63.158 0.00 0.00 45.31 5.14
4052 4818 4.193334 CTCGACGCCGGCATCTCA 62.193 66.667 28.98 9.17 36.24 3.27
4138 4904 7.378966 TGGCAACCGATGAAATTTTTATGTAA 58.621 30.769 0.00 0.00 0.00 2.41
4139 4905 8.037758 TGGCAACCGATGAAATTTTTATGTAAT 58.962 29.630 0.00 0.00 0.00 1.89
5065 6050 3.869272 GCAATGGCACCGAGAGCG 61.869 66.667 0.00 0.00 40.72 5.03
5123 6128 4.816385 CGTGGTAGAATGTATCTTGCCATT 59.184 41.667 5.26 0.00 41.17 3.16
5124 6129 5.296780 CGTGGTAGAATGTATCTTGCCATTT 59.703 40.000 5.26 0.00 41.17 2.32
5125 6130 6.498304 GTGGTAGAATGTATCTTGCCATTTG 58.502 40.000 5.26 0.00 41.17 2.32
5136 6141 9.002600 TGTATCTTGCCATTTGTCATGATATAC 57.997 33.333 0.00 0.00 34.25 1.47
5148 6153 9.936759 TTTGTCATGATATACTAATATTGCCGA 57.063 29.630 0.00 0.00 0.00 5.54
5151 6156 9.457110 GTCATGATATACTAATATTGCCGAGAG 57.543 37.037 0.00 0.00 0.00 3.20
5170 6175 5.123805 AGAGTTTAGGAACACTCTCGAAC 57.876 43.478 0.00 0.00 45.55 3.95
5176 6181 2.225963 AGGAACACTCTCGAACGTAGTG 59.774 50.000 20.81 20.81 45.00 2.74
5256 6261 9.723601 CCAATTTTGAAAATTTGAATCCTAGGA 57.276 29.630 15.46 15.46 33.41 2.94
5296 6301 6.773976 ACGGTCAATTTATGTCAATCCAAT 57.226 33.333 0.00 0.00 0.00 3.16
5304 6309 6.907853 TTTATGTCAATCCAATGGTCAACA 57.092 33.333 0.00 0.76 0.00 3.33
5305 6310 7.479352 TTTATGTCAATCCAATGGTCAACAT 57.521 32.000 0.00 8.12 43.07 2.71
5462 6636 1.153549 GCCTGGTCATGTCCTCGAC 60.154 63.158 10.43 0.00 0.00 4.20
5539 6714 3.478780 CCTCACCGTTTGGAGGGA 58.521 61.111 0.00 0.00 45.62 4.20
5585 6760 9.768662 GGTTATGCCAAAATAATCAATGAAGAT 57.231 29.630 0.00 0.00 37.17 2.40
5616 6791 9.774742 ACTTTTCAATCGTTATTCTTCTATTGC 57.225 29.630 0.00 0.00 0.00 3.56
5723 6899 3.882888 CACAAAAAGGCTCAAGTGGTCTA 59.117 43.478 0.00 0.00 0.00 2.59
5737 6913 8.149973 TCAAGTGGTCTATTTACAAAGTTGTC 57.850 34.615 0.00 0.00 42.35 3.18
5810 6986 7.681939 TTCCAAGTCACTCCATACATAAAAC 57.318 36.000 0.00 0.00 0.00 2.43
5816 6992 8.268850 AGTCACTCCATACATAAAACATGAAC 57.731 34.615 0.00 0.00 0.00 3.18
5872 7049 6.944234 ATTCAGTTCTTTCCTTTTCGACTT 57.056 33.333 0.00 0.00 0.00 3.01
5880 7057 8.343366 GTTCTTTCCTTTTCGACTTTAGATGTT 58.657 33.333 0.00 0.00 0.00 2.71
5881 7058 7.861630 TCTTTCCTTTTCGACTTTAGATGTTG 58.138 34.615 0.00 0.00 0.00 3.33
5886 7063 6.851330 CCTTTTCGACTTTAGATGTTGTGAAC 59.149 38.462 0.00 0.00 0.00 3.18
5929 7106 4.428294 TCTTTGGGATCTAATGAGCAGG 57.572 45.455 0.00 0.00 0.00 4.85
5942 7119 1.228552 AGCAGGATGTGGCCGTTTT 60.229 52.632 0.00 0.00 39.31 2.43
5943 7120 1.080569 GCAGGATGTGGCCGTTTTG 60.081 57.895 0.00 0.00 39.31 2.44
5952 7129 3.193471 GGCCGTTTTGGTCAATGTG 57.807 52.632 0.00 0.00 44.04 3.21
5963 7140 2.948979 TGGTCAATGTGTTGTTGGACTC 59.051 45.455 0.00 0.00 36.69 3.36
5990 7167 4.040755 ACTGATAGGGCTTGTGTTATCCT 58.959 43.478 0.00 0.00 0.00 3.24
5991 7168 5.216622 ACTGATAGGGCTTGTGTTATCCTA 58.783 41.667 0.00 0.00 34.96 2.94
5994 7171 3.629142 AGGGCTTGTGTTATCCTACAC 57.371 47.619 0.00 0.00 46.71 2.90
6027 7204 4.865629 ACATCTCCTGTCCGGTGA 57.134 55.556 0.00 0.00 39.45 4.02
6028 7205 3.306902 ACATCTCCTGTCCGGTGAT 57.693 52.632 0.00 0.00 44.69 3.06
6029 7206 1.115467 ACATCTCCTGTCCGGTGATC 58.885 55.000 0.00 0.00 42.58 2.92
6030 7207 0.390860 CATCTCCTGTCCGGTGATCC 59.609 60.000 0.00 0.00 42.58 3.36
6031 7208 0.032117 ATCTCCTGTCCGGTGATCCA 60.032 55.000 0.00 0.00 41.03 3.41
6032 7209 0.252057 TCTCCTGTCCGGTGATCCAA 60.252 55.000 0.00 0.00 30.59 3.53
6033 7210 0.176680 CTCCTGTCCGGTGATCCAAG 59.823 60.000 0.00 0.00 0.00 3.61
6034 7211 0.252057 TCCTGTCCGGTGATCCAAGA 60.252 55.000 0.00 0.00 0.00 3.02
6035 7212 0.833287 CCTGTCCGGTGATCCAAGAT 59.167 55.000 0.00 0.00 0.00 2.40
6036 7213 1.202580 CCTGTCCGGTGATCCAAGATC 60.203 57.143 0.00 0.00 0.00 2.75
6037 7214 0.830648 TGTCCGGTGATCCAAGATCC 59.169 55.000 0.00 0.00 0.00 3.36
6038 7215 0.106894 GTCCGGTGATCCAAGATCCC 59.893 60.000 0.00 2.92 0.00 3.85
6039 7216 0.326143 TCCGGTGATCCAAGATCCCA 60.326 55.000 0.00 0.00 0.00 4.37
6040 7217 0.107456 CCGGTGATCCAAGATCCCAG 59.893 60.000 0.00 0.00 0.00 4.45
6041 7218 0.533755 CGGTGATCCAAGATCCCAGC 60.534 60.000 2.29 0.00 0.00 4.85
6042 7219 0.533755 GGTGATCCAAGATCCCAGCG 60.534 60.000 2.29 0.00 0.00 5.18
6043 7220 0.179000 GTGATCCAAGATCCCAGCGT 59.821 55.000 2.29 0.00 0.00 5.07
6044 7221 0.178767 TGATCCAAGATCCCAGCGTG 59.821 55.000 2.29 0.00 0.00 5.34
6045 7222 0.533755 GATCCAAGATCCCAGCGTGG 60.534 60.000 0.00 0.00 36.42 4.94
6046 7223 0.982852 ATCCAAGATCCCAGCGTGGA 60.983 55.000 0.00 0.00 45.51 4.02
6054 7231 2.910688 TCCCAGCGTGGATCTTAATC 57.089 50.000 5.71 0.00 40.96 1.75
6067 7244 6.607004 GGATCTTAATCCCGAGGAAGATAA 57.393 41.667 4.43 2.86 45.11 1.75
6068 7245 6.635755 GGATCTTAATCCCGAGGAAGATAAG 58.364 44.000 4.43 9.49 45.11 1.73
6069 7246 6.351456 GGATCTTAATCCCGAGGAAGATAAGG 60.351 46.154 15.36 0.00 45.11 2.69
6070 7247 4.283722 TCTTAATCCCGAGGAAGATAAGGC 59.716 45.833 15.36 0.00 34.34 4.35
6071 7248 2.103153 ATCCCGAGGAAGATAAGGCA 57.897 50.000 0.00 0.00 34.34 4.75
6072 7249 1.120530 TCCCGAGGAAGATAAGGCAC 58.879 55.000 0.00 0.00 0.00 5.01
6073 7250 0.106894 CCCGAGGAAGATAAGGCACC 59.893 60.000 0.00 0.00 0.00 5.01
6074 7251 0.830648 CCGAGGAAGATAAGGCACCA 59.169 55.000 0.00 0.00 0.00 4.17
6075 7252 1.202580 CCGAGGAAGATAAGGCACCAG 60.203 57.143 0.00 0.00 0.00 4.00
6076 7253 1.757118 CGAGGAAGATAAGGCACCAGA 59.243 52.381 0.00 0.00 0.00 3.86
6077 7254 2.223923 CGAGGAAGATAAGGCACCAGAG 60.224 54.545 0.00 0.00 0.00 3.35
6078 7255 3.034635 GAGGAAGATAAGGCACCAGAGA 58.965 50.000 0.00 0.00 0.00 3.10
6079 7256 3.037549 AGGAAGATAAGGCACCAGAGAG 58.962 50.000 0.00 0.00 0.00 3.20
6080 7257 2.769095 GGAAGATAAGGCACCAGAGAGT 59.231 50.000 0.00 0.00 0.00 3.24
6081 7258 3.181470 GGAAGATAAGGCACCAGAGAGTC 60.181 52.174 0.00 0.00 0.00 3.36
6082 7259 3.107402 AGATAAGGCACCAGAGAGTCA 57.893 47.619 0.00 0.00 0.00 3.41
6083 7260 3.652055 AGATAAGGCACCAGAGAGTCAT 58.348 45.455 0.00 0.00 0.00 3.06
6084 7261 3.387374 AGATAAGGCACCAGAGAGTCATG 59.613 47.826 0.00 0.00 0.00 3.07
6085 7262 1.356124 AAGGCACCAGAGAGTCATGT 58.644 50.000 0.00 0.00 0.00 3.21
6086 7263 1.356124 AGGCACCAGAGAGTCATGTT 58.644 50.000 0.00 0.00 0.00 2.71
6087 7264 1.002888 AGGCACCAGAGAGTCATGTTG 59.997 52.381 0.00 0.00 0.00 3.33
6088 7265 1.271054 GGCACCAGAGAGTCATGTTGT 60.271 52.381 0.00 0.00 0.00 3.32
6089 7266 2.498167 GCACCAGAGAGTCATGTTGTT 58.502 47.619 0.00 0.00 0.00 2.83
6090 7267 2.225019 GCACCAGAGAGTCATGTTGTTG 59.775 50.000 0.00 0.00 0.00 3.33
6091 7268 3.732212 CACCAGAGAGTCATGTTGTTGA 58.268 45.455 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.286713 CCAGCGTGAAATTGAACGAACA 60.287 45.455 15.23 0.00 42.32 3.18
1 2 2.307049 CCAGCGTGAAATTGAACGAAC 58.693 47.619 15.23 1.36 42.32 3.95
3 4 0.871722 CCCAGCGTGAAATTGAACGA 59.128 50.000 15.23 0.00 42.32 3.85
4 5 0.109781 CCCCAGCGTGAAATTGAACG 60.110 55.000 8.42 8.42 42.61 3.95
5 6 1.243902 TCCCCAGCGTGAAATTGAAC 58.756 50.000 0.00 0.00 0.00 3.18
6 7 1.988293 TTCCCCAGCGTGAAATTGAA 58.012 45.000 0.00 0.00 0.00 2.69
7 8 1.818060 CATTCCCCAGCGTGAAATTGA 59.182 47.619 0.00 0.00 0.00 2.57
8 9 1.818060 TCATTCCCCAGCGTGAAATTG 59.182 47.619 0.00 0.00 0.00 2.32
9 10 2.094675 CTCATTCCCCAGCGTGAAATT 58.905 47.619 0.00 0.00 0.00 1.82
10 11 1.755179 CTCATTCCCCAGCGTGAAAT 58.245 50.000 0.00 0.00 0.00 2.17
11 12 0.960364 GCTCATTCCCCAGCGTGAAA 60.960 55.000 0.00 0.00 0.00 2.69
12 13 1.377202 GCTCATTCCCCAGCGTGAA 60.377 57.895 0.00 0.00 0.00 3.18
13 14 1.913951 ATGCTCATTCCCCAGCGTGA 61.914 55.000 0.00 0.00 38.59 4.35
14 15 1.033746 AATGCTCATTCCCCAGCGTG 61.034 55.000 0.00 0.00 38.59 5.34
15 16 0.323725 AAATGCTCATTCCCCAGCGT 60.324 50.000 0.00 0.00 38.59 5.07
16 17 1.679139 TAAATGCTCATTCCCCAGCG 58.321 50.000 0.00 0.00 38.59 5.18
17 18 3.026694 ACTTAAATGCTCATTCCCCAGC 58.973 45.455 0.00 0.00 36.08 4.85
18 19 6.966534 ATTACTTAAATGCTCATTCCCCAG 57.033 37.500 0.00 0.00 0.00 4.45
19 20 9.432982 AAATATTACTTAAATGCTCATTCCCCA 57.567 29.630 0.00 0.00 0.00 4.96
79 80 1.679139 TAAATGCTCATTCCCCAGCG 58.321 50.000 0.00 0.00 38.59 5.18
202 203 9.591792 CTTTCTTTTTCCTCTTCTTTGAATTGT 57.408 29.630 0.00 0.00 0.00 2.71
346 347 4.328712 ACAAAAACAAAATGAGCGGTGTTC 59.671 37.500 0.00 0.00 33.18 3.18
384 385 8.939929 TGTTGCTCTCTCTTTTATTAGTCATTG 58.060 33.333 0.00 0.00 0.00 2.82
385 386 9.678260 ATGTTGCTCTCTCTTTTATTAGTCATT 57.322 29.630 0.00 0.00 0.00 2.57
386 387 9.323985 GATGTTGCTCTCTCTTTTATTAGTCAT 57.676 33.333 0.00 0.00 0.00 3.06
387 388 7.766278 GGATGTTGCTCTCTCTTTTATTAGTCA 59.234 37.037 0.00 0.00 0.00 3.41
388 389 7.766278 TGGATGTTGCTCTCTCTTTTATTAGTC 59.234 37.037 0.00 0.00 0.00 2.59
428 429 9.961264 TTATGGTGTTGTTATCTTGGTTACATA 57.039 29.630 0.00 0.00 0.00 2.29
499 500 0.525761 TCTGCGATCGTGATCACACA 59.474 50.000 24.93 11.52 46.20 3.72
588 601 3.074412 CGCTGTTGGAACTAAAGTGGAT 58.926 45.455 0.00 0.00 0.00 3.41
707 723 2.417719 GATGATTAGGATGTGACGGCC 58.582 52.381 0.00 0.00 0.00 6.13
850 869 2.029844 GCGTGGGCTGAGTGAGAAC 61.030 63.158 0.00 0.00 35.83 3.01
913 940 2.028130 GCAGTGGAAGAGAGCTAGCTA 58.972 52.381 19.38 0.00 0.00 3.32
914 941 0.823460 GCAGTGGAAGAGAGCTAGCT 59.177 55.000 19.45 19.45 0.00 3.32
915 942 0.823460 AGCAGTGGAAGAGAGCTAGC 59.177 55.000 6.62 6.62 33.06 3.42
916 943 1.408702 GGAGCAGTGGAAGAGAGCTAG 59.591 57.143 0.00 0.00 35.36 3.42
943 970 1.091771 CGTAGCTTCCCGGTCGACTA 61.092 60.000 16.46 0.00 0.00 2.59
1045 1075 1.302832 CCTGCTTGGCCTTCTTCGT 60.303 57.895 3.32 0.00 0.00 3.85
1101 1131 6.126768 ACTGAAAATAGGGAGGATCAATCGAA 60.127 38.462 0.00 0.00 36.25 3.71
1151 1187 5.718649 ACGTGCATATGTAGCTTTACTTG 57.281 39.130 4.29 0.00 0.00 3.16
1152 1188 5.064707 CCAACGTGCATATGTAGCTTTACTT 59.935 40.000 4.29 0.00 0.00 2.24
1374 1419 6.983890 CCTAATTTTACTTTTGTGCCACTGTT 59.016 34.615 0.00 0.00 0.00 3.16
1424 1470 8.740123 AAAACTCTCTAGATCACGATCTTAGA 57.260 34.615 14.46 15.10 45.31 2.10
1469 1520 5.352643 ACACTACAAACGCATAAAACTCC 57.647 39.130 0.00 0.00 0.00 3.85
1473 1524 9.570488 AAGTAAAAACACTACAAACGCATAAAA 57.430 25.926 0.00 0.00 0.00 1.52
1535 1586 2.731341 GCTGAGCAATGTTCAGACATGC 60.731 50.000 27.29 11.21 45.58 4.06
1567 1618 0.539986 TTCCACGCTCTTGGGTATCC 59.460 55.000 0.00 0.00 37.60 2.59
1587 1638 4.560128 TGTGTTGCACTTTTTGTTAAGCA 58.440 34.783 0.00 0.00 35.11 3.91
1597 1648 1.545582 ACTGTTGCTGTGTTGCACTTT 59.454 42.857 0.00 0.00 43.20 2.66
1618 1669 6.152492 TGTCTCATATGGATAGCTAGAGCAAG 59.848 42.308 2.13 0.00 45.16 4.01
1697 1750 6.418946 ACTTAAAGGTCCTCTGGATTTCATC 58.581 40.000 0.00 0.00 32.73 2.92
1698 1751 6.394345 ACTTAAAGGTCCTCTGGATTTCAT 57.606 37.500 0.00 0.00 32.73 2.57
1699 1752 5.843019 ACTTAAAGGTCCTCTGGATTTCA 57.157 39.130 0.00 0.00 32.73 2.69
1700 1753 6.819146 CACTACTTAAAGGTCCTCTGGATTTC 59.181 42.308 0.00 0.00 32.73 2.17
1701 1754 6.296489 CCACTACTTAAAGGTCCTCTGGATTT 60.296 42.308 0.00 0.00 32.73 2.17
1702 1755 5.189934 CCACTACTTAAAGGTCCTCTGGATT 59.810 44.000 0.00 0.00 32.73 3.01
1703 1756 4.717280 CCACTACTTAAAGGTCCTCTGGAT 59.283 45.833 0.00 0.00 32.73 3.41
1705 1758 3.838903 ACCACTACTTAAAGGTCCTCTGG 59.161 47.826 0.00 0.00 0.00 3.86
1706 1759 5.221661 ACAACCACTACTTAAAGGTCCTCTG 60.222 44.000 0.00 0.00 32.05 3.35
1707 1760 4.906060 ACAACCACTACTTAAAGGTCCTCT 59.094 41.667 0.00 0.00 32.05 3.69
1708 1761 5.224821 ACAACCACTACTTAAAGGTCCTC 57.775 43.478 0.00 0.00 32.05 3.71
1709 1762 5.104235 ACAACAACCACTACTTAAAGGTCCT 60.104 40.000 0.00 0.00 32.05 3.85
1710 1763 5.128205 ACAACAACCACTACTTAAAGGTCC 58.872 41.667 0.00 0.00 32.05 4.46
1711 1764 6.492254 CAACAACAACCACTACTTAAAGGTC 58.508 40.000 0.00 0.00 32.05 3.85
1712 1765 5.163591 GCAACAACAACCACTACTTAAAGGT 60.164 40.000 0.00 0.00 35.47 3.50
1713 1766 5.067283 AGCAACAACAACCACTACTTAAAGG 59.933 40.000 0.00 0.00 0.00 3.11
1714 1767 5.971202 CAGCAACAACAACCACTACTTAAAG 59.029 40.000 0.00 0.00 0.00 1.85
1715 1768 5.416326 ACAGCAACAACAACCACTACTTAAA 59.584 36.000 0.00 0.00 0.00 1.52
1716 1769 4.944930 ACAGCAACAACAACCACTACTTAA 59.055 37.500 0.00 0.00 0.00 1.85
1717 1770 4.519213 ACAGCAACAACAACCACTACTTA 58.481 39.130 0.00 0.00 0.00 2.24
1718 1771 3.352648 ACAGCAACAACAACCACTACTT 58.647 40.909 0.00 0.00 0.00 2.24
1719 1772 2.999331 ACAGCAACAACAACCACTACT 58.001 42.857 0.00 0.00 0.00 2.57
1720 1773 3.775661 AACAGCAACAACAACCACTAC 57.224 42.857 0.00 0.00 0.00 2.73
1721 1774 4.201832 CGTAAACAGCAACAACAACCACTA 60.202 41.667 0.00 0.00 0.00 2.74
1722 1775 3.426963 CGTAAACAGCAACAACAACCACT 60.427 43.478 0.00 0.00 0.00 4.00
1723 1776 2.849473 CGTAAACAGCAACAACAACCAC 59.151 45.455 0.00 0.00 0.00 4.16
1724 1777 2.488545 ACGTAAACAGCAACAACAACCA 59.511 40.909 0.00 0.00 0.00 3.67
1725 1778 3.139603 ACGTAAACAGCAACAACAACC 57.860 42.857 0.00 0.00 0.00 3.77
1726 1779 4.159857 TGAACGTAAACAGCAACAACAAC 58.840 39.130 0.00 0.00 0.00 3.32
1727 1780 4.421033 TGAACGTAAACAGCAACAACAA 57.579 36.364 0.00 0.00 0.00 2.83
1728 1781 4.624336 ATGAACGTAAACAGCAACAACA 57.376 36.364 0.00 0.00 0.00 3.33
1729 1782 5.031578 TGAATGAACGTAAACAGCAACAAC 58.968 37.500 0.00 0.00 0.00 3.32
1730 1783 5.236655 TGAATGAACGTAAACAGCAACAA 57.763 34.783 0.00 0.00 0.00 2.83
1731 1784 4.884458 TGAATGAACGTAAACAGCAACA 57.116 36.364 0.00 0.00 0.00 3.33
1732 1785 6.747659 ATTTGAATGAACGTAAACAGCAAC 57.252 33.333 0.00 0.00 0.00 4.17
1733 1786 6.419413 GGAATTTGAATGAACGTAAACAGCAA 59.581 34.615 0.00 0.00 0.00 3.91
1734 1787 5.918011 GGAATTTGAATGAACGTAAACAGCA 59.082 36.000 0.00 0.00 0.00 4.41
1735 1788 6.149633 AGGAATTTGAATGAACGTAAACAGC 58.850 36.000 0.00 0.00 0.00 4.40
1736 1789 8.574196 AAAGGAATTTGAATGAACGTAAACAG 57.426 30.769 0.00 0.00 0.00 3.16
1737 1790 8.934507 AAAAGGAATTTGAATGAACGTAAACA 57.065 26.923 0.00 0.00 0.00 2.83
1753 1806 4.853924 AAGTCGCATGTCAAAAGGAATT 57.146 36.364 0.00 0.00 0.00 2.17
1758 1811 5.281693 TGTGATAAGTCGCATGTCAAAAG 57.718 39.130 0.00 0.00 39.80 2.27
1792 1845 4.582869 TCAACATGCAGAAAGTAGATGCT 58.417 39.130 0.00 0.00 40.62 3.79
1819 1872 7.917505 GTGAAGATTGTTTCTTTGTGTGAAGAT 59.082 33.333 0.00 0.00 44.88 2.40
1820 1873 7.094420 TGTGAAGATTGTTTCTTTGTGTGAAGA 60.094 33.333 0.00 0.00 44.88 2.87
1821 1874 7.008628 GTGTGAAGATTGTTTCTTTGTGTGAAG 59.991 37.037 0.00 0.00 44.88 3.02
1822 1875 6.806249 GTGTGAAGATTGTTTCTTTGTGTGAA 59.194 34.615 0.00 0.00 44.88 3.18
1823 1876 6.321717 GTGTGAAGATTGTTTCTTTGTGTGA 58.678 36.000 0.00 0.00 44.88 3.58
1824 1877 5.227805 CGTGTGAAGATTGTTTCTTTGTGTG 59.772 40.000 0.00 0.00 44.88 3.82
1825 1878 5.106317 ACGTGTGAAGATTGTTTCTTTGTGT 60.106 36.000 0.00 0.00 44.88 3.72
1826 1879 5.227805 CACGTGTGAAGATTGTTTCTTTGTG 59.772 40.000 7.58 0.00 44.88 3.33
1827 1880 5.123186 TCACGTGTGAAGATTGTTTCTTTGT 59.877 36.000 16.51 0.00 44.88 2.83
1828 1881 5.568482 TCACGTGTGAAGATTGTTTCTTTG 58.432 37.500 16.51 0.00 44.88 2.77
1829 1882 5.354234 ACTCACGTGTGAAGATTGTTTCTTT 59.646 36.000 23.32 0.00 44.88 2.52
1830 1883 5.220662 CACTCACGTGTGAAGATTGTTTCTT 60.221 40.000 23.32 0.00 40.58 2.52
1831 1884 4.271049 CACTCACGTGTGAAGATTGTTTCT 59.729 41.667 23.32 0.00 40.12 2.52
1832 1885 4.518217 CACTCACGTGTGAAGATTGTTTC 58.482 43.478 23.32 0.00 40.12 2.78
1833 1886 4.536364 CACTCACGTGTGAAGATTGTTT 57.464 40.909 23.32 0.00 40.12 2.83
1882 1935 2.736347 TGGAACAGAGGTAGTAGCTCC 58.264 52.381 22.67 10.88 43.38 4.70
1883 1936 4.803098 TTTGGAACAGAGGTAGTAGCTC 57.197 45.455 19.58 19.58 42.39 4.09
1891 1982 9.533831 AAACATCTTATATTTTGGAACAGAGGT 57.466 29.630 0.00 0.00 42.39 3.85
1896 1987 9.770097 TGCAAAAACATCTTATATTTTGGAACA 57.230 25.926 10.66 0.31 39.20 3.18
1913 2004 8.239314 TGCAGTTTAAATTGAATTGCAAAAACA 58.761 25.926 15.92 9.66 43.64 2.83
1914 2005 8.612233 TGCAGTTTAAATTGAATTGCAAAAAC 57.388 26.923 15.92 7.11 43.64 2.43
1920 2011 9.235537 ACATTTTTGCAGTTTAAATTGAATTGC 57.764 25.926 14.30 10.26 39.36 3.56
1937 2028 9.221775 CCGTATCAAAGTATAAGACATTTTTGC 57.778 33.333 0.00 0.00 0.00 3.68
1940 2031 9.326413 CCTCCGTATCAAAGTATAAGACATTTT 57.674 33.333 0.00 0.00 0.00 1.82
1942 2033 7.289317 TCCCTCCGTATCAAAGTATAAGACATT 59.711 37.037 0.00 0.00 0.00 2.71
1944 2035 6.131264 TCCCTCCGTATCAAAGTATAAGACA 58.869 40.000 0.00 0.00 0.00 3.41
1948 2045 7.520798 TCTACTCCCTCCGTATCAAAGTATAA 58.479 38.462 0.00 0.00 0.00 0.98
1950 2047 5.950023 TCTACTCCCTCCGTATCAAAGTAT 58.050 41.667 0.00 0.00 0.00 2.12
1953 2050 4.021894 CCATCTACTCCCTCCGTATCAAAG 60.022 50.000 0.00 0.00 0.00 2.77
1959 2056 4.166725 TCTTAACCATCTACTCCCTCCGTA 59.833 45.833 0.00 0.00 0.00 4.02
2009 2106 5.708697 CAGCAGCCCAAGATCATGAATAATA 59.291 40.000 0.00 0.00 0.00 0.98
2010 2107 4.523173 CAGCAGCCCAAGATCATGAATAAT 59.477 41.667 0.00 0.00 0.00 1.28
2011 2108 3.887110 CAGCAGCCCAAGATCATGAATAA 59.113 43.478 0.00 0.00 0.00 1.40
2057 2157 0.754957 TGTGGTGTTTGCTTCAGGGG 60.755 55.000 0.00 0.00 0.00 4.79
2062 2162 2.344142 CGTGTTTTGTGGTGTTTGCTTC 59.656 45.455 0.00 0.00 0.00 3.86
2080 2180 0.377554 TGTAACCAAAACACGGCGTG 59.622 50.000 35.89 35.89 39.75 5.34
2103 2203 6.833346 TGGGATGTGACAGGGTATAAATTA 57.167 37.500 0.00 0.00 0.00 1.40
2118 2218 6.864360 ATTTTGTGTGAAATTTGGGATGTG 57.136 33.333 0.00 0.00 0.00 3.21
2119 2219 9.571816 AAATATTTTGTGTGAAATTTGGGATGT 57.428 25.926 0.00 0.00 31.96 3.06
2131 2231 7.353414 TCCAGGTTTGAAATATTTTGTGTGA 57.647 32.000 1.43 0.00 0.00 3.58
2145 2245 3.954904 TCGGACAAATTTTCCAGGTTTGA 59.045 39.130 15.30 5.11 36.58 2.69
2146 2246 4.314740 TCGGACAAATTTTCCAGGTTTG 57.685 40.909 15.30 0.00 38.46 2.93
2162 2262 6.367422 TGGTTAAAATTCATGCAAATTCGGAC 59.633 34.615 0.00 0.00 0.00 4.79
2163 2263 6.459066 TGGTTAAAATTCATGCAAATTCGGA 58.541 32.000 0.00 0.00 0.00 4.55
2164 2264 6.718454 TGGTTAAAATTCATGCAAATTCGG 57.282 33.333 0.00 0.00 0.00 4.30
2166 2266 8.567104 AGGTTTGGTTAAAATTCATGCAAATTC 58.433 29.630 0.00 0.00 0.00 2.17
2171 2272 9.566432 AAATAAGGTTTGGTTAAAATTCATGCA 57.434 25.926 0.00 0.00 0.00 3.96
2223 2353 1.076632 AAAAAGACCCCACGTGCCA 60.077 52.632 10.91 0.00 0.00 4.92
2242 2372 1.112315 AGACCATGTGCCCGCAAAAA 61.112 50.000 0.00 0.00 0.00 1.94
2243 2373 0.250945 TAGACCATGTGCCCGCAAAA 60.251 50.000 0.00 0.00 0.00 2.44
2244 2374 0.250945 TTAGACCATGTGCCCGCAAA 60.251 50.000 0.00 0.00 0.00 3.68
2245 2375 0.958382 GTTAGACCATGTGCCCGCAA 60.958 55.000 0.00 0.00 0.00 4.85
2246 2376 1.376683 GTTAGACCATGTGCCCGCA 60.377 57.895 0.00 0.00 0.00 5.69
2247 2377 0.748005 ATGTTAGACCATGTGCCCGC 60.748 55.000 0.00 0.00 0.00 6.13
2248 2378 1.670811 GAATGTTAGACCATGTGCCCG 59.329 52.381 0.00 0.00 0.00 6.13
2249 2379 2.024414 GGAATGTTAGACCATGTGCCC 58.976 52.381 0.00 0.00 0.00 5.36
2270 2412 5.539582 TTACGACACATTTGTATCTTGCC 57.460 39.130 0.00 0.00 35.47 4.52
2305 2454 7.475137 TTTTCTGAAGAAAAGAAAGGGTTCA 57.525 32.000 12.99 0.00 45.76 3.18
2339 2488 4.821260 ACAGCATTCACACTCACATTTGTA 59.179 37.500 0.00 0.00 0.00 2.41
2417 2566 2.577700 AGGTTACATCAAACGGTGCAA 58.422 42.857 0.00 0.00 0.00 4.08
2664 2816 3.003378 TCACTATGAAGTAGCATCGACCG 59.997 47.826 0.00 0.00 33.48 4.79
2672 2824 3.849911 TGCACACTCACTATGAAGTAGC 58.150 45.455 0.00 0.00 33.48 3.58
2679 2834 5.361135 TCAAACATTGCACACTCACTATG 57.639 39.130 0.00 0.00 0.00 2.23
2699 2854 9.974980 GGAATTACCTTGAAGTTGTAATTTTCA 57.025 29.630 15.71 0.00 42.28 2.69
2753 2908 8.753497 AAACAGTCACTCTCTTTTATTTCCTT 57.247 30.769 0.00 0.00 0.00 3.36
2756 2911 8.621286 TCCAAAACAGTCACTCTCTTTTATTTC 58.379 33.333 0.00 0.00 0.00 2.17
2757 2912 8.406297 GTCCAAAACAGTCACTCTCTTTTATTT 58.594 33.333 0.00 0.00 0.00 1.40
2758 2913 7.254795 CGTCCAAAACAGTCACTCTCTTTTATT 60.255 37.037 0.00 0.00 0.00 1.40
2760 2915 5.522460 CGTCCAAAACAGTCACTCTCTTTTA 59.478 40.000 0.00 0.00 0.00 1.52
2765 2937 1.527311 GCGTCCAAAACAGTCACTCTC 59.473 52.381 0.00 0.00 0.00 3.20
2770 2942 0.179234 TCCTGCGTCCAAAACAGTCA 59.821 50.000 0.00 0.00 0.00 3.41
2790 2962 7.908601 CGGATAAGTAGCAGGAAACAAAAATAC 59.091 37.037 0.00 0.00 0.00 1.89
2795 2967 3.687698 GCGGATAAGTAGCAGGAAACAAA 59.312 43.478 0.00 0.00 0.00 2.83
2833 3005 9.793259 TTCTCTACAATTAATGTTCTCTTGGTT 57.207 29.630 0.00 0.00 43.63 3.67
2906 3082 5.339008 AAACCTTGAGATATCTACACGCA 57.661 39.130 4.89 0.00 0.00 5.24
2983 3159 5.297776 AGAAAAGGCAACGATGATAATCCAG 59.702 40.000 0.00 0.00 46.39 3.86
3011 3187 9.658799 CGACCAATTGTGATCCTTCTATAATAT 57.341 33.333 4.43 0.00 0.00 1.28
3012 3188 8.866093 TCGACCAATTGTGATCCTTCTATAATA 58.134 33.333 4.43 0.00 0.00 0.98
3013 3189 7.735917 TCGACCAATTGTGATCCTTCTATAAT 58.264 34.615 4.43 0.00 0.00 1.28
3014 3190 7.119709 TCGACCAATTGTGATCCTTCTATAA 57.880 36.000 4.43 0.00 0.00 0.98
3015 3191 6.724893 TCGACCAATTGTGATCCTTCTATA 57.275 37.500 4.43 0.00 0.00 1.31
3016 3192 5.614324 TCGACCAATTGTGATCCTTCTAT 57.386 39.130 4.43 0.00 0.00 1.98
3017 3193 5.614324 ATCGACCAATTGTGATCCTTCTA 57.386 39.130 4.43 0.00 0.00 2.10
3018 3194 3.981071 TCGACCAATTGTGATCCTTCT 57.019 42.857 4.43 0.00 0.00 2.85
3019 3195 6.049263 GTAATCGACCAATTGTGATCCTTC 57.951 41.667 4.43 0.00 0.00 3.46
3069 3245 5.885881 TCTTTGCTTTATTTGACACACGTT 58.114 33.333 0.00 0.00 0.00 3.99
3107 3283 0.034186 TCGGGCGAAGGGAGTACTTA 60.034 55.000 0.00 0.00 0.00 2.24
3113 3289 1.923227 GCTTTTTCGGGCGAAGGGAG 61.923 60.000 0.00 0.00 35.38 4.30
3115 3291 1.524008 AAGCTTTTTCGGGCGAAGGG 61.524 55.000 0.00 0.00 35.38 3.95
3116 3292 0.387239 CAAGCTTTTTCGGGCGAAGG 60.387 55.000 0.00 0.00 35.38 3.46
3117 3293 0.310854 ACAAGCTTTTTCGGGCGAAG 59.689 50.000 0.00 0.00 35.38 3.79
3118 3294 0.309612 GACAAGCTTTTTCGGGCGAA 59.690 50.000 0.00 0.00 0.00 4.70
3119 3295 1.512156 GGACAAGCTTTTTCGGGCGA 61.512 55.000 0.00 0.00 0.00 5.54
3121 3297 1.179174 AGGGACAAGCTTTTTCGGGC 61.179 55.000 0.00 0.00 0.00 6.13
3122 3298 1.328279 AAGGGACAAGCTTTTTCGGG 58.672 50.000 0.00 0.00 0.00 5.14
3123 3299 4.577834 TTTAAGGGACAAGCTTTTTCGG 57.422 40.909 0.00 0.00 0.00 4.30
3124 3300 4.923281 CCATTTAAGGGACAAGCTTTTTCG 59.077 41.667 0.00 0.00 0.00 3.46
3125 3301 6.096673 TCCATTTAAGGGACAAGCTTTTTC 57.903 37.500 0.00 0.00 0.00 2.29
3127 3303 5.543790 ACATCCATTTAAGGGACAAGCTTTT 59.456 36.000 0.00 0.00 37.23 2.27
3128 3304 5.086621 ACATCCATTTAAGGGACAAGCTTT 58.913 37.500 0.00 0.00 37.23 3.51
3129 3305 4.677182 ACATCCATTTAAGGGACAAGCTT 58.323 39.130 0.00 0.00 37.23 3.74
3130 3306 4.322057 ACATCCATTTAAGGGACAAGCT 57.678 40.909 0.00 0.00 37.23 3.74
3131 3307 6.715347 AATACATCCATTTAAGGGACAAGC 57.285 37.500 0.00 0.00 37.23 4.01
3132 3308 8.352942 GCTAAATACATCCATTTAAGGGACAAG 58.647 37.037 0.00 0.00 37.23 3.16
3133 3309 7.836685 TGCTAAATACATCCATTTAAGGGACAA 59.163 33.333 0.00 0.00 37.23 3.18
3134 3310 7.284489 GTGCTAAATACATCCATTTAAGGGACA 59.716 37.037 0.00 0.00 37.23 4.02
3135 3311 7.255486 GGTGCTAAATACATCCATTTAAGGGAC 60.255 40.741 0.00 0.00 37.23 4.46
3136 3312 6.775629 GGTGCTAAATACATCCATTTAAGGGA 59.224 38.462 0.00 0.00 39.14 4.20
3138 3314 7.581213 TGGTGCTAAATACATCCATTTAAGG 57.419 36.000 0.00 0.00 31.67 2.69
3139 3315 8.686334 ACTTGGTGCTAAATACATCCATTTAAG 58.314 33.333 0.00 0.00 31.67 1.85
3140 3316 8.588290 ACTTGGTGCTAAATACATCCATTTAA 57.412 30.769 0.00 0.00 31.67 1.52
3141 3317 8.588290 AACTTGGTGCTAAATACATCCATTTA 57.412 30.769 0.00 0.00 30.84 1.40
3142 3318 7.480760 AACTTGGTGCTAAATACATCCATTT 57.519 32.000 0.00 0.00 32.91 2.32
3143 3319 7.834181 ACTAACTTGGTGCTAAATACATCCATT 59.166 33.333 0.00 0.00 0.00 3.16
3144 3320 7.346471 ACTAACTTGGTGCTAAATACATCCAT 58.654 34.615 0.00 0.00 0.00 3.41
3145 3321 6.717289 ACTAACTTGGTGCTAAATACATCCA 58.283 36.000 0.00 0.00 0.00 3.41
3146 3322 7.985752 AGTACTAACTTGGTGCTAAATACATCC 59.014 37.037 0.00 0.00 29.00 3.51
3147 3323 8.943909 AGTACTAACTTGGTGCTAAATACATC 57.056 34.615 0.00 0.00 29.00 3.06
3149 3325 9.246670 TCTAGTACTAACTTGGTGCTAAATACA 57.753 33.333 3.76 0.00 37.15 2.29
3153 3329 9.246670 TGTATCTAGTACTAACTTGGTGCTAAA 57.753 33.333 3.76 0.00 37.15 1.85
3154 3330 8.812513 TGTATCTAGTACTAACTTGGTGCTAA 57.187 34.615 3.76 0.00 37.15 3.09
3155 3331 8.991783 ATGTATCTAGTACTAACTTGGTGCTA 57.008 34.615 3.76 3.64 37.15 3.49
3156 3332 7.014422 GGATGTATCTAGTACTAACTTGGTGCT 59.986 40.741 3.76 1.68 37.15 4.40
3157 3333 7.146648 GGATGTATCTAGTACTAACTTGGTGC 58.853 42.308 3.76 0.00 37.15 5.01
3158 3334 8.234136 TGGATGTATCTAGTACTAACTTGGTG 57.766 38.462 3.76 0.00 37.15 4.17
3159 3335 9.080097 GATGGATGTATCTAGTACTAACTTGGT 57.920 37.037 3.76 0.00 37.15 3.67
3160 3336 9.303116 AGATGGATGTATCTAGTACTAACTTGG 57.697 37.037 3.76 0.00 35.70 3.61
3165 3341 9.976776 CCCTTAGATGGATGTATCTAGTACTAA 57.023 37.037 3.76 0.00 39.92 2.24
3166 3342 9.347777 TCCCTTAGATGGATGTATCTAGTACTA 57.652 37.037 1.89 1.89 39.92 1.82
3167 3343 8.110908 GTCCCTTAGATGGATGTATCTAGTACT 58.889 40.741 0.00 0.00 39.92 2.73
3168 3344 7.889073 TGTCCCTTAGATGGATGTATCTAGTAC 59.111 40.741 0.00 0.00 39.92 2.73
3169 3345 7.996788 TGTCCCTTAGATGGATGTATCTAGTA 58.003 38.462 0.00 0.00 39.92 1.82
3170 3346 6.864421 TGTCCCTTAGATGGATGTATCTAGT 58.136 40.000 0.00 0.00 39.92 2.57
3171 3347 7.782897 TTGTCCCTTAGATGGATGTATCTAG 57.217 40.000 0.00 0.00 39.92 2.43
3172 3348 7.789831 AGTTTGTCCCTTAGATGGATGTATCTA 59.210 37.037 0.00 0.00 38.35 1.98
3173 3349 6.617371 AGTTTGTCCCTTAGATGGATGTATCT 59.383 38.462 0.00 0.00 40.39 1.98
3174 3350 6.831976 AGTTTGTCCCTTAGATGGATGTATC 58.168 40.000 0.00 0.00 33.65 2.24
3175 3351 6.831664 AGTTTGTCCCTTAGATGGATGTAT 57.168 37.500 0.00 0.00 33.65 2.29
3176 3352 6.414732 CAAGTTTGTCCCTTAGATGGATGTA 58.585 40.000 0.00 0.00 33.65 2.29
3177 3353 5.256474 CAAGTTTGTCCCTTAGATGGATGT 58.744 41.667 0.00 0.00 33.65 3.06
3178 3354 4.641989 CCAAGTTTGTCCCTTAGATGGATG 59.358 45.833 0.00 0.00 33.65 3.51
3179 3355 4.325344 CCCAAGTTTGTCCCTTAGATGGAT 60.325 45.833 0.00 0.00 33.65 3.41
3180 3356 3.010138 CCCAAGTTTGTCCCTTAGATGGA 59.990 47.826 0.00 0.00 0.00 3.41
3181 3357 3.010138 TCCCAAGTTTGTCCCTTAGATGG 59.990 47.826 0.00 0.00 0.00 3.51
3182 3358 4.010349 GTCCCAAGTTTGTCCCTTAGATG 58.990 47.826 0.00 0.00 0.00 2.90
3183 3359 3.655777 TGTCCCAAGTTTGTCCCTTAGAT 59.344 43.478 0.00 0.00 0.00 1.98
3184 3360 3.050089 TGTCCCAAGTTTGTCCCTTAGA 58.950 45.455 0.00 0.00 0.00 2.10
3185 3361 3.502123 TGTCCCAAGTTTGTCCCTTAG 57.498 47.619 0.00 0.00 0.00 2.18
3186 3362 3.955524 TTGTCCCAAGTTTGTCCCTTA 57.044 42.857 0.00 0.00 0.00 2.69
3187 3363 2.838637 TTGTCCCAAGTTTGTCCCTT 57.161 45.000 0.00 0.00 0.00 3.95
3188 3364 2.838637 TTTGTCCCAAGTTTGTCCCT 57.161 45.000 0.00 0.00 0.00 4.20
3189 3365 4.415881 AAATTTGTCCCAAGTTTGTCCC 57.584 40.909 0.00 0.00 0.00 4.46
3209 3385 1.631405 TACTCCCTCCGTCCGAAAAA 58.369 50.000 0.00 0.00 0.00 1.94
3210 3386 1.631405 TTACTCCCTCCGTCCGAAAA 58.369 50.000 0.00 0.00 0.00 2.29
3211 3387 1.856629 ATTACTCCCTCCGTCCGAAA 58.143 50.000 0.00 0.00 0.00 3.46
3212 3388 2.301346 GTATTACTCCCTCCGTCCGAA 58.699 52.381 0.00 0.00 0.00 4.30
3213 3389 1.811558 CGTATTACTCCCTCCGTCCGA 60.812 57.143 0.00 0.00 0.00 4.55
3214 3390 0.590195 CGTATTACTCCCTCCGTCCG 59.410 60.000 0.00 0.00 0.00 4.79
3215 3391 1.972872 TCGTATTACTCCCTCCGTCC 58.027 55.000 0.00 0.00 0.00 4.79
3216 3392 4.376340 TTTTCGTATTACTCCCTCCGTC 57.624 45.455 0.00 0.00 0.00 4.79
3217 3393 4.806640 TTTTTCGTATTACTCCCTCCGT 57.193 40.909 0.00 0.00 0.00 4.69
3238 3419 7.312154 TCAAATTGCACTCGTATGCTAATTTT 58.688 30.769 20.06 9.94 46.28 1.82
3239 3420 6.851609 TCAAATTGCACTCGTATGCTAATTT 58.148 32.000 18.61 18.61 46.28 1.82
3240 3421 6.435430 TCAAATTGCACTCGTATGCTAATT 57.565 33.333 13.40 13.13 46.28 1.40
3241 3422 6.435430 TTCAAATTGCACTCGTATGCTAAT 57.565 33.333 13.40 9.19 46.28 1.73
3255 3438 7.344441 GCGGGAAATGTTATATTTCAAATTGC 58.656 34.615 14.57 7.80 39.18 3.56
3332 4040 2.015587 AGGTACGAGATCAGGTTCGAC 58.984 52.381 8.86 3.55 39.93 4.20
3743 4506 1.361204 TGAAGAAGCTCCACATGGGA 58.639 50.000 0.00 0.00 45.89 4.37
3878 4641 1.446099 GAAGCCGATCACTGCGACA 60.446 57.895 0.00 0.00 0.00 4.35
3884 4647 1.215647 GGACACGAAGCCGATCACT 59.784 57.895 0.00 0.00 39.50 3.41
3905 4668 5.394663 GGGCATCTTGACATATAGCGAGTAT 60.395 44.000 0.00 0.00 0.00 2.12
4052 4818 3.236003 GAGAAGACGGCCGGTGGTT 62.236 63.158 31.76 16.51 0.00 3.67
4099 4865 0.975040 TTGCCAGTTTGCCACAAGGT 60.975 50.000 0.00 0.00 37.19 3.50
4138 4904 3.575965 CAGCCGAAAACTGCCTAAAAT 57.424 42.857 0.00 0.00 0.00 1.82
4146 4912 0.731514 CATGCTGCAGCCGAAAACTG 60.732 55.000 34.64 16.16 41.18 3.16
4147 4913 1.582968 CATGCTGCAGCCGAAAACT 59.417 52.632 34.64 8.62 41.18 2.66
4278 5263 1.686110 GATCTCCTCCACCCGGTGT 60.686 63.158 16.55 0.00 0.00 4.16
5065 6050 2.290071 TGTAGCTTACACCCTTCTTGGC 60.290 50.000 0.00 0.00 32.89 4.52
5123 6128 9.586435 CTCGGCAATATTAGTATATCATGACAA 57.414 33.333 0.00 0.00 0.00 3.18
5124 6129 8.966868 TCTCGGCAATATTAGTATATCATGACA 58.033 33.333 0.00 0.00 0.00 3.58
5125 6130 9.457110 CTCTCGGCAATATTAGTATATCATGAC 57.543 37.037 0.00 0.00 0.00 3.06
5136 6141 6.984474 TGTTCCTAAACTCTCGGCAATATTAG 59.016 38.462 0.00 0.00 36.30 1.73
5151 6156 3.636381 ACGTTCGAGAGTGTTCCTAAAC 58.364 45.455 0.00 0.00 35.85 2.01
5170 6175 8.761497 ACGATTACATTTCCAAATATCACTACG 58.239 33.333 0.00 0.00 0.00 3.51
5176 6181 8.332464 TCGTGAACGATTACATTTCCAAATATC 58.668 33.333 0.50 0.00 44.22 1.63
5256 6261 4.932799 TGACCGTTGATATCACGTTTGAAT 59.067 37.500 19.33 5.13 34.61 2.57
5296 6301 6.186957 ACAAATCCTTGCTATATGTTGACCA 58.813 36.000 0.00 0.00 35.84 4.02
5399 6456 1.134007 TCGAAGCATGCCTTGATCCAT 60.134 47.619 15.66 0.00 32.78 3.41
5400 6457 0.252761 TCGAAGCATGCCTTGATCCA 59.747 50.000 15.66 0.00 32.78 3.41
5539 6714 5.717119 ACCTAGAGCCATGAAACCTTTAT 57.283 39.130 0.00 0.00 0.00 1.40
5616 6791 9.877178 AAGGTAGTAGTACAAGAGATCAAATTG 57.123 33.333 9.89 0.00 0.00 2.32
5687 6862 4.889995 CCTTTTTGTGGAAGGAGAAAGAGT 59.110 41.667 0.00 0.00 45.25 3.24
5872 7049 6.691754 TGAAGCTTTGTTCACAACATCTAA 57.308 33.333 0.00 0.00 41.79 2.10
5880 7057 5.827797 ACCTAATCTTGAAGCTTTGTTCACA 59.172 36.000 0.00 0.00 36.15 3.58
5881 7058 6.145535 CACCTAATCTTGAAGCTTTGTTCAC 58.854 40.000 0.00 0.00 36.15 3.18
5886 7063 7.856145 AGATACACCTAATCTTGAAGCTTTG 57.144 36.000 0.00 0.00 29.18 2.77
5929 7106 0.671251 TTGACCAAAACGGCCACATC 59.329 50.000 2.24 0.00 39.03 3.06
5942 7119 2.948979 GAGTCCAACAACACATTGACCA 59.051 45.455 0.00 0.00 39.30 4.02
5943 7120 2.032030 CGAGTCCAACAACACATTGACC 60.032 50.000 0.00 0.00 39.30 4.02
5951 7128 1.068588 CAGTCTCCGAGTCCAACAACA 59.931 52.381 0.00 0.00 0.00 3.33
5952 7129 1.340248 TCAGTCTCCGAGTCCAACAAC 59.660 52.381 0.00 0.00 0.00 3.32
5963 7140 1.115467 ACAAGCCCTATCAGTCTCCG 58.885 55.000 0.00 0.00 0.00 4.63
5990 7167 6.486993 AGATGTCATAGCGACTATCTTGTGTA 59.513 38.462 0.00 0.00 45.60 2.90
5991 7168 4.983671 TGTCATAGCGACTATCTTGTGT 57.016 40.909 0.00 0.00 45.60 3.72
5994 7171 5.182950 AGGAGATGTCATAGCGACTATCTTG 59.817 44.000 0.00 0.00 45.60 3.02
6013 7190 0.252057 TTGGATCACCGGACAGGAGA 60.252 55.000 9.46 0.00 45.00 3.71
6020 7197 0.326143 TGGGATCTTGGATCACCGGA 60.326 55.000 9.46 0.00 39.42 5.14
6021 7198 0.107456 CTGGGATCTTGGATCACCGG 59.893 60.000 0.00 0.00 39.42 5.28
6022 7199 0.533755 GCTGGGATCTTGGATCACCG 60.534 60.000 7.23 2.70 39.42 4.94
6023 7200 0.533755 CGCTGGGATCTTGGATCACC 60.534 60.000 7.23 7.43 0.00 4.02
6024 7201 0.179000 ACGCTGGGATCTTGGATCAC 59.821 55.000 9.33 6.38 0.00 3.06
6025 7202 0.178767 CACGCTGGGATCTTGGATCA 59.821 55.000 9.33 0.00 0.00 2.92
6026 7203 0.533755 CCACGCTGGGATCTTGGATC 60.534 60.000 0.00 0.00 32.67 3.36
6027 7204 0.982852 TCCACGCTGGGATCTTGGAT 60.983 55.000 0.00 0.00 38.32 3.41
6028 7205 0.982852 ATCCACGCTGGGATCTTGGA 60.983 55.000 0.00 1.36 44.40 3.53
6029 7206 1.528824 ATCCACGCTGGGATCTTGG 59.471 57.895 0.00 0.00 44.40 3.61
6035 7212 2.910688 GATTAAGATCCACGCTGGGA 57.089 50.000 0.00 0.00 42.21 4.37
6045 7222 6.635755 CCTTATCTTCCTCGGGATTAAGATC 58.364 44.000 9.80 0.00 39.01 2.75
6046 7223 5.046231 GCCTTATCTTCCTCGGGATTAAGAT 60.046 44.000 10.89 10.89 40.72 2.40
6047 7224 4.283722 GCCTTATCTTCCTCGGGATTAAGA 59.716 45.833 13.40 7.71 32.85 2.10
6048 7225 4.040461 TGCCTTATCTTCCTCGGGATTAAG 59.960 45.833 0.00 0.00 0.00 1.85
6049 7226 3.971305 TGCCTTATCTTCCTCGGGATTAA 59.029 43.478 0.00 0.00 0.00 1.40
6050 7227 3.323979 GTGCCTTATCTTCCTCGGGATTA 59.676 47.826 0.00 0.00 0.00 1.75
6051 7228 2.104963 GTGCCTTATCTTCCTCGGGATT 59.895 50.000 0.00 0.00 0.00 3.01
6052 7229 1.694696 GTGCCTTATCTTCCTCGGGAT 59.305 52.381 0.00 0.00 0.00 3.85
6053 7230 1.120530 GTGCCTTATCTTCCTCGGGA 58.879 55.000 0.00 0.00 0.00 5.14
6054 7231 0.106894 GGTGCCTTATCTTCCTCGGG 59.893 60.000 0.00 0.00 0.00 5.14
6055 7232 0.830648 TGGTGCCTTATCTTCCTCGG 59.169 55.000 0.00 0.00 0.00 4.63
6056 7233 1.757118 TCTGGTGCCTTATCTTCCTCG 59.243 52.381 0.00 0.00 0.00 4.63
6057 7234 3.034635 TCTCTGGTGCCTTATCTTCCTC 58.965 50.000 0.00 0.00 0.00 3.71
6058 7235 3.037549 CTCTCTGGTGCCTTATCTTCCT 58.962 50.000 0.00 0.00 0.00 3.36
6059 7236 2.769095 ACTCTCTGGTGCCTTATCTTCC 59.231 50.000 0.00 0.00 0.00 3.46
6060 7237 3.449018 TGACTCTCTGGTGCCTTATCTTC 59.551 47.826 0.00 0.00 0.00 2.87
6061 7238 3.445008 TGACTCTCTGGTGCCTTATCTT 58.555 45.455 0.00 0.00 0.00 2.40
6062 7239 3.107402 TGACTCTCTGGTGCCTTATCT 57.893 47.619 0.00 0.00 0.00 1.98
6063 7240 3.133721 ACATGACTCTCTGGTGCCTTATC 59.866 47.826 0.00 0.00 0.00 1.75
6064 7241 3.110705 ACATGACTCTCTGGTGCCTTAT 58.889 45.455 0.00 0.00 0.00 1.73
6065 7242 2.540383 ACATGACTCTCTGGTGCCTTA 58.460 47.619 0.00 0.00 0.00 2.69
6066 7243 1.356124 ACATGACTCTCTGGTGCCTT 58.644 50.000 0.00 0.00 0.00 4.35
6067 7244 1.002888 CAACATGACTCTCTGGTGCCT 59.997 52.381 0.00 0.00 0.00 4.75
6068 7245 1.271054 ACAACATGACTCTCTGGTGCC 60.271 52.381 0.00 0.00 33.26 5.01
6069 7246 2.175878 ACAACATGACTCTCTGGTGC 57.824 50.000 0.00 0.00 33.26 5.01
6070 7247 3.732212 TCAACAACATGACTCTCTGGTG 58.268 45.455 0.00 0.00 36.15 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.