Multiple sequence alignment - TraesCS1D01G255000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G255000 chr1D 100.000 5152 0 0 1 5152 347394332 347399483 0.000000e+00 9515.0
1 TraesCS1D01G255000 chr1B 94.038 3237 133 26 1922 5152 468503619 468506801 0.000000e+00 4854.0
2 TraesCS1D01G255000 chr1B 96.210 1029 31 1 899 1927 468502563 468503583 0.000000e+00 1677.0
3 TraesCS1D01G255000 chr1B 96.891 193 5 1 500 691 507923246 507923054 6.440000e-84 322.0
4 TraesCS1D01G255000 chr1B 83.750 320 29 15 506 823 655061723 655062021 1.090000e-71 281.0
5 TraesCS1D01G255000 chr1B 94.805 77 2 1 162 236 468500839 468500915 9.060000e-23 119.0
6 TraesCS1D01G255000 chr7B 95.438 2718 108 10 1922 4636 126777725 126780429 0.000000e+00 4318.0
7 TraesCS1D01G255000 chr7B 89.855 345 18 4 1591 1927 126777354 126777689 1.330000e-115 427.0
8 TraesCS1D01G255000 chr7B 87.580 314 16 5 503 814 263147781 263147489 4.940000e-90 342.0
9 TraesCS1D01G255000 chrUn 95.033 2718 125 9 1922 4636 16578958 16581668 0.000000e+00 4263.0
10 TraesCS1D01G255000 chrUn 87.565 386 21 7 1550 1927 16578556 16578922 6.170000e-114 422.0
11 TraesCS1D01G255000 chr1A 94.344 1379 49 15 1933 3309 448009555 448010906 0.000000e+00 2087.0
12 TraesCS1D01G255000 chr1A 92.089 948 58 9 807 1748 448007785 448008721 0.000000e+00 1319.0
13 TraesCS1D01G255000 chr1A 96.721 183 6 0 1745 1927 448009330 448009512 6.480000e-79 305.0
14 TraesCS1D01G255000 chr1A 94.595 74 4 0 163 236 448007521 448007594 1.170000e-21 115.0
15 TraesCS1D01G255000 chr6D 87.282 1549 126 38 1934 3459 25782036 25783536 0.000000e+00 1703.0
16 TraesCS1D01G255000 chr6D 86.297 613 76 6 987 1599 25781070 25781674 0.000000e+00 660.0
17 TraesCS1D01G255000 chr6D 95.122 41 0 2 815 855 470625197 470625235 4.310000e-06 63.9
18 TraesCS1D01G255000 chr6B 86.985 1552 132 41 1934 3461 41992290 41993795 0.000000e+00 1683.0
19 TraesCS1D01G255000 chr6B 86.747 581 69 8 1020 1599 41991359 41991932 1.560000e-179 640.0
20 TraesCS1D01G255000 chr6B 89.720 107 10 1 710 815 47985563 47985669 9.000000e-28 135.0
21 TraesCS1D01G255000 chr6A 92.707 809 59 0 1934 2742 23888307 23889115 0.000000e+00 1168.0
22 TraesCS1D01G255000 chr6A 87.055 703 69 19 2769 3459 23889102 23889794 0.000000e+00 774.0
23 TraesCS1D01G255000 chr6A 85.689 566 75 6 1040 1605 23887398 23887957 4.440000e-165 592.0
24 TraesCS1D01G255000 chr6A 97.297 37 1 0 815 851 78031628 78031592 4.310000e-06 63.9
25 TraesCS1D01G255000 chr6A 97.297 37 1 0 815 851 78094509 78094473 4.310000e-06 63.9
26 TraesCS1D01G255000 chr6A 97.222 36 1 0 816 851 77897075 77897040 1.550000e-05 62.1
27 TraesCS1D01G255000 chr6A 94.737 38 2 0 815 852 77994005 77993968 5.570000e-05 60.2
28 TraesCS1D01G255000 chr6A 94.737 38 2 0 815 852 78146738 78146701 5.570000e-05 60.2
29 TraesCS1D01G255000 chr2D 87.658 316 18 10 501 814 36493127 36492831 1.060000e-91 348.0
30 TraesCS1D01G255000 chr2D 87.578 322 12 4 501 813 618294475 618294777 1.060000e-91 348.0
31 TraesCS1D01G255000 chr2D 87.220 313 28 9 501 812 12301861 12302162 3.820000e-91 346.0
32 TraesCS1D01G255000 chr2D 85.535 318 22 12 501 813 417546801 417546503 1.390000e-80 311.0
33 TraesCS1D01G255000 chr7D 87.117 326 13 6 500 816 49806895 49806590 4.940000e-90 342.0
34 TraesCS1D01G255000 chr3B 86.405 331 16 6 494 814 191186859 191186548 8.270000e-88 335.0
35 TraesCS1D01G255000 chr3B 78.378 407 59 18 2906 3306 463111511 463111128 2.400000e-58 237.0
36 TraesCS1D01G255000 chr3B 82.796 186 29 3 1395 1579 463113303 463113120 4.130000e-36 163.0
37 TraesCS1D01G255000 chr4D 86.349 315 31 9 500 813 20077417 20077114 2.970000e-87 333.0
38 TraesCS1D01G255000 chr4D 85.759 323 35 10 500 821 20141633 20141321 1.070000e-86 331.0
39 TraesCS1D01G255000 chr4D 83.230 322 43 10 506 818 504324206 504323887 8.440000e-73 285.0
40 TraesCS1D01G255000 chr3D 86.335 322 15 9 501 812 506037061 506036759 1.790000e-84 324.0
41 TraesCS1D01G255000 chr3D 98.182 55 1 0 80 134 608801478 608801424 4.250000e-16 97.1
42 TraesCS1D01G255000 chr3D 95.349 43 0 2 815 857 475296885 475296925 3.330000e-07 67.6
43 TraesCS1D01G255000 chr2A 84.783 322 35 13 496 815 667688436 667688745 1.390000e-80 311.0
44 TraesCS1D01G255000 chr7A 85.159 283 22 8 531 811 602236712 602236448 6.570000e-69 272.0
45 TraesCS1D01G255000 chr7A 90.909 77 5 1 1 77 34710689 34710763 9.130000e-18 102.0
46 TraesCS1D01G255000 chr3A 81.940 299 31 8 518 813 21472572 21472294 1.120000e-56 231.0
47 TraesCS1D01G255000 chr3A 78.133 407 60 18 2906 3306 477586465 477586082 1.120000e-56 231.0
48 TraesCS1D01G255000 chr5D 83.696 184 10 2 627 808 65198514 65198679 6.910000e-34 156.0
49 TraesCS1D01G255000 chr5D 83.824 68 9 2 4 71 526697326 526697391 4.310000e-06 63.9
50 TraesCS1D01G255000 chr5D 96.774 31 1 0 4609 4639 370727612 370727582 9.000000e-03 52.8
51 TraesCS1D01G255000 chr2B 95.122 41 0 2 815 855 105750243 105750281 4.310000e-06 63.9
52 TraesCS1D01G255000 chr4A 100.000 28 0 0 129 156 598046505 598046532 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G255000 chr1D 347394332 347399483 5151 False 9515.000000 9515 100.000000 1 5152 1 chr1D.!!$F1 5151
1 TraesCS1D01G255000 chr1B 468500839 468506801 5962 False 2216.666667 4854 95.017667 162 5152 3 chr1B.!!$F2 4990
2 TraesCS1D01G255000 chr7B 126777354 126780429 3075 False 2372.500000 4318 92.646500 1591 4636 2 chr7B.!!$F1 3045
3 TraesCS1D01G255000 chrUn 16578556 16581668 3112 False 2342.500000 4263 91.299000 1550 4636 2 chrUn.!!$F1 3086
4 TraesCS1D01G255000 chr1A 448007521 448010906 3385 False 956.500000 2087 94.437250 163 3309 4 chr1A.!!$F1 3146
5 TraesCS1D01G255000 chr6D 25781070 25783536 2466 False 1181.500000 1703 86.789500 987 3459 2 chr6D.!!$F2 2472
6 TraesCS1D01G255000 chr6B 41991359 41993795 2436 False 1161.500000 1683 86.866000 1020 3461 2 chr6B.!!$F2 2441
7 TraesCS1D01G255000 chr6A 23887398 23889794 2396 False 844.666667 1168 88.483667 1040 3459 3 chr6A.!!$F1 2419

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
737 956 0.032515 TTCGGAGGTGCTCATAGGGA 60.033 55.000 0.00 0.0 31.08 4.20 F
801 1020 0.111266 GCGTTTGCGTCTGTACTGTG 60.111 55.000 0.00 0.0 40.81 3.66 F
2112 4359 0.179702 TCAGGATGTGCTGGATGAGC 59.820 55.000 1.62 0.0 41.47 4.26 F
3393 5668 2.613595 TGCACTAGCTGGCGATATTTTG 59.386 45.455 0.00 0.0 42.74 2.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2246 4493 4.809426 GGTTACCTCAATAGACCATTGTCG 59.191 45.833 0.00 0.00 46.51 4.35 R
2771 5020 9.791820 TCATGCAAAGTGAAGTATCAATAAATG 57.208 29.630 0.00 0.00 37.30 2.32 R
3480 5756 1.866853 GAGCAACCAAAGGGGAAGCG 61.867 60.000 0.00 0.00 42.22 4.68 R
4670 6949 0.034089 AGGAAAAAGGCCAGATCGGG 60.034 55.000 5.01 7.64 34.06 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.657436 AAGAAATCTAGATCGAACGGCT 57.343 40.909 5.51 0.00 0.00 5.52
24 25 4.231718 AGAAATCTAGATCGAACGGCTC 57.768 45.455 5.51 0.00 0.00 4.70
43 44 3.905678 CGAGAGGCGGCGGATCTT 61.906 66.667 9.78 0.00 36.03 2.40
44 45 2.501610 GAGAGGCGGCGGATCTTT 59.498 61.111 9.78 0.00 0.00 2.52
45 46 1.740285 GAGAGGCGGCGGATCTTTA 59.260 57.895 9.78 0.00 0.00 1.85
46 47 0.104304 GAGAGGCGGCGGATCTTTAA 59.896 55.000 9.78 0.00 0.00 1.52
47 48 0.539986 AGAGGCGGCGGATCTTTAAA 59.460 50.000 9.78 0.00 0.00 1.52
48 49 1.065709 AGAGGCGGCGGATCTTTAAAA 60.066 47.619 9.78 0.00 0.00 1.52
49 50 1.330829 GAGGCGGCGGATCTTTAAAAG 59.669 52.381 9.78 0.00 0.00 2.27
50 51 1.065709 AGGCGGCGGATCTTTAAAAGA 60.066 47.619 9.78 0.00 42.69 2.52
51 52 1.741145 GGCGGCGGATCTTTAAAAGAA 59.259 47.619 9.78 0.00 41.63 2.52
52 53 2.162809 GGCGGCGGATCTTTAAAAGAAA 59.837 45.455 9.78 0.00 41.63 2.52
53 54 3.181490 GGCGGCGGATCTTTAAAAGAAAT 60.181 43.478 9.78 0.00 41.63 2.17
54 55 4.035684 GCGGCGGATCTTTAAAAGAAATC 58.964 43.478 9.78 0.00 41.63 2.17
55 56 4.598062 CGGCGGATCTTTAAAAGAAATCC 58.402 43.478 0.00 0.00 41.63 3.01
58 59 4.598062 CGGATCTTTAAAAGAAATCCGCC 58.402 43.478 19.41 4.99 46.77 6.13
59 60 4.598062 GGATCTTTAAAAGAAATCCGCCG 58.402 43.478 0.00 0.00 41.63 6.46
60 61 4.497507 GGATCTTTAAAAGAAATCCGCCGG 60.498 45.833 0.00 0.00 41.63 6.13
61 62 2.162809 TCTTTAAAAGAAATCCGCCGGC 59.837 45.455 19.07 19.07 33.83 6.13
62 63 1.828979 TTAAAAGAAATCCGCCGGCT 58.171 45.000 26.68 4.40 0.00 5.52
63 64 1.091537 TAAAAGAAATCCGCCGGCTG 58.908 50.000 26.68 19.63 0.00 4.85
64 65 0.608035 AAAAGAAATCCGCCGGCTGA 60.608 50.000 26.68 24.98 0.00 4.26
65 66 1.305930 AAAGAAATCCGCCGGCTGAC 61.306 55.000 23.64 10.71 0.00 3.51
66 67 3.564027 GAAATCCGCCGGCTGACG 61.564 66.667 23.64 7.47 43.80 4.35
88 89 4.842139 CGTAGCACGCTCTTTTCTTATT 57.158 40.909 0.00 0.00 33.65 1.40
89 90 4.569029 CGTAGCACGCTCTTTTCTTATTG 58.431 43.478 0.00 0.00 33.65 1.90
90 91 4.091509 CGTAGCACGCTCTTTTCTTATTGT 59.908 41.667 0.00 0.00 33.65 2.71
91 92 5.389516 CGTAGCACGCTCTTTTCTTATTGTT 60.390 40.000 0.00 0.00 33.65 2.83
92 93 5.438761 AGCACGCTCTTTTCTTATTGTTT 57.561 34.783 0.00 0.00 0.00 2.83
93 94 5.831997 AGCACGCTCTTTTCTTATTGTTTT 58.168 33.333 0.00 0.00 0.00 2.43
94 95 6.273071 AGCACGCTCTTTTCTTATTGTTTTT 58.727 32.000 0.00 0.00 0.00 1.94
153 154 3.713826 TGGGAAACTCTTACCATCACC 57.286 47.619 0.00 0.00 40.99 4.02
154 155 2.307686 TGGGAAACTCTTACCATCACCC 59.692 50.000 0.00 0.00 40.99 4.61
155 156 2.629051 GGAAACTCTTACCATCACCCG 58.371 52.381 0.00 0.00 0.00 5.28
156 157 2.235402 GGAAACTCTTACCATCACCCGA 59.765 50.000 0.00 0.00 0.00 5.14
157 158 3.118371 GGAAACTCTTACCATCACCCGAT 60.118 47.826 0.00 0.00 0.00 4.18
174 175 2.315901 CGATGGCGAAAACTTGGTTTC 58.684 47.619 1.35 1.35 40.82 2.78
236 239 9.567848 CAAATAATGTTTTAGGTTGTTCGCTAT 57.432 29.630 0.00 0.00 0.00 2.97
239 242 9.826574 ATAATGTTTTAGGTTGTTCGCTATAGA 57.173 29.630 3.21 0.00 0.00 1.98
240 243 8.732746 AATGTTTTAGGTTGTTCGCTATAGAT 57.267 30.769 3.21 0.00 0.00 1.98
241 244 8.732746 ATGTTTTAGGTTGTTCGCTATAGATT 57.267 30.769 3.21 0.00 0.00 2.40
242 245 9.826574 ATGTTTTAGGTTGTTCGCTATAGATTA 57.173 29.630 3.21 0.00 0.00 1.75
243 246 9.090692 TGTTTTAGGTTGTTCGCTATAGATTAC 57.909 33.333 3.21 0.00 0.00 1.89
244 247 7.919313 TTTAGGTTGTTCGCTATAGATTACG 57.081 36.000 3.21 0.00 0.00 3.18
245 248 5.511234 AGGTTGTTCGCTATAGATTACGT 57.489 39.130 3.21 0.00 0.00 3.57
246 249 5.899299 AGGTTGTTCGCTATAGATTACGTT 58.101 37.500 3.21 0.00 0.00 3.99
247 250 7.031226 AGGTTGTTCGCTATAGATTACGTTA 57.969 36.000 3.21 0.00 0.00 3.18
248 251 7.483307 AGGTTGTTCGCTATAGATTACGTTAA 58.517 34.615 3.21 0.00 0.00 2.01
249 252 7.975616 AGGTTGTTCGCTATAGATTACGTTAAA 59.024 33.333 3.21 0.00 0.00 1.52
250 253 8.594687 GGTTGTTCGCTATAGATTACGTTAAAA 58.405 33.333 3.21 0.00 0.00 1.52
251 254 9.956797 GTTGTTCGCTATAGATTACGTTAAAAA 57.043 29.630 3.21 0.00 0.00 1.94
300 518 4.916983 TTTTGCGCTGGCTATGATTTAT 57.083 36.364 9.73 0.00 40.82 1.40
331 549 3.912248 ACACGACCCATAAGACTATCCT 58.088 45.455 0.00 0.00 0.00 3.24
334 552 5.301298 ACACGACCCATAAGACTATCCTTAC 59.699 44.000 0.00 0.00 32.11 2.34
336 554 4.082895 CGACCCATAAGACTATCCTTACCG 60.083 50.000 0.00 0.00 32.11 4.02
350 569 1.533731 CTTACCGGTCGTGTGCATTTT 59.466 47.619 12.40 0.00 0.00 1.82
353 572 0.309302 CCGGTCGTGTGCATTTTTCA 59.691 50.000 0.00 0.00 0.00 2.69
365 584 3.119531 TGCATTTTTCATGATCGTCCCAC 60.120 43.478 0.00 0.00 0.00 4.61
388 607 1.728069 CTCGCGCTAACTCTAGCCA 59.272 57.895 5.56 0.00 46.80 4.75
403 622 4.443857 CCACACGATCGGCATCAT 57.556 55.556 20.98 0.00 0.00 2.45
406 625 0.530431 CACACGATCGGCATCATGGA 60.530 55.000 20.98 0.00 0.00 3.41
407 626 0.177836 ACACGATCGGCATCATGGAA 59.822 50.000 20.98 0.00 0.00 3.53
408 627 0.583438 CACGATCGGCATCATGGAAC 59.417 55.000 20.98 0.00 0.00 3.62
429 648 4.415501 CGCGAGTGAGCACGTTGC 62.416 66.667 0.00 2.28 45.46 4.17
441 660 1.522258 GCACGTTGCAAGACCAAATTG 59.478 47.619 0.00 0.00 44.26 2.32
444 663 2.425312 ACGTTGCAAGACCAAATTGTGA 59.575 40.909 0.00 0.00 0.00 3.58
445 664 2.788786 CGTTGCAAGACCAAATTGTGAC 59.211 45.455 0.00 0.00 0.00 3.67
447 666 1.336440 TGCAAGACCAAATTGTGACCG 59.664 47.619 0.00 0.00 0.00 4.79
449 668 2.604614 GCAAGACCAAATTGTGACCGAC 60.605 50.000 0.00 0.00 0.00 4.79
453 672 1.313772 CCAAATTGTGACCGACCACA 58.686 50.000 5.87 5.87 44.45 4.17
454 673 1.266718 CCAAATTGTGACCGACCACAG 59.733 52.381 9.21 0.51 46.32 3.66
463 682 4.202274 TGTGACCGACCACAGAATAGAAAA 60.202 41.667 5.87 0.00 41.63 2.29
465 684 5.411669 GTGACCGACCACAGAATAGAAAATT 59.588 40.000 2.89 0.00 37.04 1.82
486 705 5.907197 TTTGAAGATCTCGACTCAACAAC 57.093 39.130 7.00 0.00 0.00 3.32
499 718 7.847487 TCGACTCAACAACAACAATAAAGTAG 58.153 34.615 0.00 0.00 0.00 2.57
500 719 7.042321 TCGACTCAACAACAACAATAAAGTAGG 60.042 37.037 0.00 0.00 0.00 3.18
501 720 6.735130 ACTCAACAACAACAATAAAGTAGGC 58.265 36.000 0.00 0.00 0.00 3.93
502 721 5.753744 TCAACAACAACAATAAAGTAGGCG 58.246 37.500 0.00 0.00 0.00 5.52
503 722 5.527951 TCAACAACAACAATAAAGTAGGCGA 59.472 36.000 0.00 0.00 0.00 5.54
504 723 6.038382 TCAACAACAACAATAAAGTAGGCGAA 59.962 34.615 0.00 0.00 0.00 4.70
505 724 5.754778 ACAACAACAATAAAGTAGGCGAAC 58.245 37.500 0.00 0.00 0.00 3.95
506 725 5.151389 CAACAACAATAAAGTAGGCGAACC 58.849 41.667 0.00 0.00 0.00 3.62
507 726 4.391155 ACAACAATAAAGTAGGCGAACCA 58.609 39.130 0.00 0.00 39.06 3.67
508 727 4.822896 ACAACAATAAAGTAGGCGAACCAA 59.177 37.500 0.00 0.00 39.06 3.67
509 728 5.151389 CAACAATAAAGTAGGCGAACCAAC 58.849 41.667 0.00 0.00 39.06 3.77
510 729 3.754850 ACAATAAAGTAGGCGAACCAACC 59.245 43.478 0.00 0.00 39.06 3.77
511 730 3.994931 ATAAAGTAGGCGAACCAACCT 57.005 42.857 0.00 0.00 39.06 3.50
512 731 5.180271 CAATAAAGTAGGCGAACCAACCTA 58.820 41.667 0.00 0.00 39.06 3.08
513 732 3.994931 AAAGTAGGCGAACCAACCTAT 57.005 42.857 0.00 0.00 40.57 2.57
514 733 2.981859 AGTAGGCGAACCAACCTATG 57.018 50.000 0.00 0.00 40.57 2.23
529 748 5.373812 AACCTATGGTTGGATGGTTAGAG 57.626 43.478 0.71 0.00 45.07 2.43
530 749 3.716872 ACCTATGGTTGGATGGTTAGAGG 59.283 47.826 0.00 0.00 27.29 3.69
531 750 3.073062 CCTATGGTTGGATGGTTAGAGGG 59.927 52.174 0.00 0.00 0.00 4.30
532 751 2.352561 TGGTTGGATGGTTAGAGGGA 57.647 50.000 0.00 0.00 0.00 4.20
533 752 1.913419 TGGTTGGATGGTTAGAGGGAC 59.087 52.381 0.00 0.00 0.00 4.46
535 754 3.246203 TGGTTGGATGGTTAGAGGGACTA 60.246 47.826 0.00 0.00 41.55 2.59
536 755 3.974642 GGTTGGATGGTTAGAGGGACTAT 59.025 47.826 0.00 0.00 41.55 2.12
537 756 4.202367 GGTTGGATGGTTAGAGGGACTATG 60.202 50.000 0.00 0.00 41.55 2.23
538 757 3.587498 TGGATGGTTAGAGGGACTATGG 58.413 50.000 0.00 0.00 41.55 2.74
539 758 3.051341 TGGATGGTTAGAGGGACTATGGT 60.051 47.826 0.00 0.00 41.55 3.55
540 759 4.171243 TGGATGGTTAGAGGGACTATGGTA 59.829 45.833 0.00 0.00 41.55 3.25
541 760 5.162760 TGGATGGTTAGAGGGACTATGGTAT 60.163 44.000 0.00 0.00 41.55 2.73
542 761 5.422650 GGATGGTTAGAGGGACTATGGTATC 59.577 48.000 0.00 0.00 41.55 2.24
543 762 4.748701 TGGTTAGAGGGACTATGGTATCC 58.251 47.826 0.00 0.00 41.55 2.59
553 772 2.126142 TGGTATCCCCAGCCCACA 59.874 61.111 0.00 0.00 38.72 4.17
554 773 2.000701 TGGTATCCCCAGCCCACAG 61.001 63.158 0.00 0.00 38.72 3.66
555 774 2.757124 GGTATCCCCAGCCCACAGG 61.757 68.421 0.00 0.00 0.00 4.00
557 776 3.281975 TATCCCCAGCCCACAGGGT 62.282 63.158 3.68 0.00 46.51 4.34
558 777 2.798760 TATCCCCAGCCCACAGGGTT 62.799 60.000 3.68 0.00 46.51 4.11
559 778 4.366684 CCCCAGCCCACAGGGTTC 62.367 72.222 3.68 0.00 46.51 3.62
560 779 3.579302 CCCAGCCCACAGGGTTCA 61.579 66.667 3.68 0.00 46.51 3.18
561 780 2.520458 CCAGCCCACAGGGTTCAA 59.480 61.111 3.68 0.00 46.51 2.69
562 781 1.604593 CCAGCCCACAGGGTTCAAG 60.605 63.158 3.68 0.00 46.51 3.02
563 782 1.151450 CAGCCCACAGGGTTCAAGT 59.849 57.895 3.68 0.00 46.51 3.16
564 783 0.890996 CAGCCCACAGGGTTCAAGTC 60.891 60.000 3.68 0.00 46.51 3.01
565 784 1.603739 GCCCACAGGGTTCAAGTCC 60.604 63.158 3.68 0.00 46.51 3.85
566 785 2.069165 GCCCACAGGGTTCAAGTCCT 62.069 60.000 3.68 0.00 46.51 3.85
570 789 3.329300 CAGGGTTCAAGTCCTGGTG 57.671 57.895 0.00 0.00 44.99 4.17
571 790 0.890996 CAGGGTTCAAGTCCTGGTGC 60.891 60.000 0.00 0.00 44.99 5.01
572 791 1.062488 AGGGTTCAAGTCCTGGTGCT 61.062 55.000 0.00 0.00 31.11 4.40
573 792 0.606673 GGGTTCAAGTCCTGGTGCTC 60.607 60.000 0.00 0.00 0.00 4.26
574 793 0.951040 GGTTCAAGTCCTGGTGCTCG 60.951 60.000 0.00 0.00 0.00 5.03
575 794 1.301716 TTCAAGTCCTGGTGCTCGC 60.302 57.895 0.00 0.00 0.00 5.03
576 795 2.731691 TTCAAGTCCTGGTGCTCGCC 62.732 60.000 0.00 0.00 0.00 5.54
577 796 2.925170 AAGTCCTGGTGCTCGCCT 60.925 61.111 0.86 0.00 0.00 5.52
578 797 2.520536 AAGTCCTGGTGCTCGCCTT 61.521 57.895 0.86 0.00 0.00 4.35
579 798 2.032681 GTCCTGGTGCTCGCCTTT 59.967 61.111 0.86 0.00 0.00 3.11
580 799 1.192146 AGTCCTGGTGCTCGCCTTTA 61.192 55.000 0.86 0.00 0.00 1.85
581 800 0.107654 GTCCTGGTGCTCGCCTTTAT 60.108 55.000 0.86 0.00 0.00 1.40
582 801 0.618458 TCCTGGTGCTCGCCTTTATT 59.382 50.000 0.86 0.00 0.00 1.40
583 802 1.017387 CCTGGTGCTCGCCTTTATTC 58.983 55.000 0.86 0.00 0.00 1.75
584 803 1.017387 CTGGTGCTCGCCTTTATTCC 58.983 55.000 0.86 0.00 0.00 3.01
585 804 0.618458 TGGTGCTCGCCTTTATTCCT 59.382 50.000 0.86 0.00 0.00 3.36
586 805 1.017387 GGTGCTCGCCTTTATTCCTG 58.983 55.000 0.00 0.00 0.00 3.86
587 806 1.017387 GTGCTCGCCTTTATTCCTGG 58.983 55.000 0.00 0.00 0.00 4.45
588 807 0.908910 TGCTCGCCTTTATTCCTGGA 59.091 50.000 0.00 0.00 0.00 3.86
589 808 1.490490 TGCTCGCCTTTATTCCTGGAT 59.510 47.619 0.00 0.00 0.00 3.41
590 809 2.092429 TGCTCGCCTTTATTCCTGGATT 60.092 45.455 0.00 0.00 0.00 3.01
591 810 2.952310 GCTCGCCTTTATTCCTGGATTT 59.048 45.455 0.00 0.00 0.00 2.17
592 811 4.134563 GCTCGCCTTTATTCCTGGATTTA 58.865 43.478 0.00 0.00 0.00 1.40
593 812 4.762251 GCTCGCCTTTATTCCTGGATTTAT 59.238 41.667 0.00 0.00 0.00 1.40
594 813 5.241728 GCTCGCCTTTATTCCTGGATTTATT 59.758 40.000 0.00 0.00 0.00 1.40
595 814 6.239036 GCTCGCCTTTATTCCTGGATTTATTT 60.239 38.462 0.00 0.00 0.00 1.40
596 815 7.272037 TCGCCTTTATTCCTGGATTTATTTC 57.728 36.000 0.00 0.00 0.00 2.17
597 816 6.831353 TCGCCTTTATTCCTGGATTTATTTCA 59.169 34.615 0.00 0.00 0.00 2.69
598 817 7.013274 TCGCCTTTATTCCTGGATTTATTTCAG 59.987 37.037 0.00 0.00 0.00 3.02
599 818 7.013274 CGCCTTTATTCCTGGATTTATTTCAGA 59.987 37.037 0.00 0.00 0.00 3.27
600 819 8.695456 GCCTTTATTCCTGGATTTATTTCAGAA 58.305 33.333 0.00 0.00 0.00 3.02
606 825 7.333528 TCCTGGATTTATTTCAGAATTTCCG 57.666 36.000 0.00 0.00 0.00 4.30
607 826 6.321181 TCCTGGATTTATTTCAGAATTTCCGG 59.679 38.462 0.00 0.00 30.94 5.14
608 827 5.901552 TGGATTTATTTCAGAATTTCCGGC 58.098 37.500 0.00 0.00 0.00 6.13
609 828 4.976116 GGATTTATTTCAGAATTTCCGGCG 59.024 41.667 0.00 0.00 0.00 6.46
610 829 5.220970 GGATTTATTTCAGAATTTCCGGCGA 60.221 40.000 9.30 0.00 0.00 5.54
611 830 5.828299 TTTATTTCAGAATTTCCGGCGAT 57.172 34.783 9.30 0.00 0.00 4.58
612 831 3.698029 ATTTCAGAATTTCCGGCGATG 57.302 42.857 9.30 0.00 0.00 3.84
613 832 0.732571 TTCAGAATTTCCGGCGATGC 59.267 50.000 9.30 0.00 0.00 3.91
614 833 1.010797 CAGAATTTCCGGCGATGCG 60.011 57.895 9.30 0.00 0.00 4.73
625 844 2.711311 CGATGCGCATTCAGTGGG 59.289 61.111 26.12 4.47 43.21 4.61
626 845 1.815003 CGATGCGCATTCAGTGGGA 60.815 57.895 26.12 0.00 43.02 4.37
627 846 1.769098 CGATGCGCATTCAGTGGGAG 61.769 60.000 26.12 4.12 43.02 4.30
628 847 1.442526 GATGCGCATTCAGTGGGAGG 61.443 60.000 26.12 0.00 43.02 4.30
629 848 1.913951 ATGCGCATTCAGTGGGAGGA 61.914 55.000 19.28 0.00 43.02 3.71
630 849 1.817099 GCGCATTCAGTGGGAGGAG 60.817 63.158 0.30 0.00 43.02 3.69
631 850 1.900351 CGCATTCAGTGGGAGGAGA 59.100 57.895 0.00 0.00 43.02 3.71
632 851 0.460987 CGCATTCAGTGGGAGGAGAC 60.461 60.000 0.00 0.00 43.02 3.36
633 852 0.460987 GCATTCAGTGGGAGGAGACG 60.461 60.000 0.00 0.00 0.00 4.18
634 853 0.898320 CATTCAGTGGGAGGAGACGT 59.102 55.000 0.00 0.00 0.00 4.34
635 854 1.276421 CATTCAGTGGGAGGAGACGTT 59.724 52.381 0.00 0.00 0.00 3.99
636 855 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
657 876 2.046988 TCGACGACGAGGTGCCTA 60.047 61.111 5.75 0.00 43.81 3.93
658 877 2.099831 CGACGACGAGGTGCCTAC 59.900 66.667 0.00 0.00 42.66 3.18
659 878 2.099831 GACGACGAGGTGCCTACG 59.900 66.667 0.00 9.22 0.00 3.51
660 879 3.392595 GACGACGAGGTGCCTACGG 62.393 68.421 0.00 1.18 0.00 4.02
661 880 3.437795 CGACGAGGTGCCTACGGT 61.438 66.667 12.22 3.01 0.00 4.83
662 881 2.181021 GACGAGGTGCCTACGGTG 59.819 66.667 12.22 0.00 0.00 4.94
663 882 2.282674 ACGAGGTGCCTACGGTGA 60.283 61.111 12.22 0.00 0.00 4.02
664 883 2.181021 CGAGGTGCCTACGGTGAC 59.819 66.667 0.00 0.00 0.00 3.67
665 884 2.341101 CGAGGTGCCTACGGTGACT 61.341 63.158 0.00 0.00 0.00 3.41
666 885 1.874345 CGAGGTGCCTACGGTGACTT 61.874 60.000 0.00 0.00 0.00 3.01
667 886 0.320697 GAGGTGCCTACGGTGACTTT 59.679 55.000 0.00 0.00 0.00 2.66
668 887 0.034896 AGGTGCCTACGGTGACTTTG 59.965 55.000 0.00 0.00 0.00 2.77
669 888 0.250166 GGTGCCTACGGTGACTTTGT 60.250 55.000 0.00 0.00 0.00 2.83
670 889 1.001181 GGTGCCTACGGTGACTTTGTA 59.999 52.381 0.00 0.00 0.00 2.41
671 890 2.548493 GGTGCCTACGGTGACTTTGTAA 60.548 50.000 0.00 0.00 0.00 2.41
672 891 3.332034 GTGCCTACGGTGACTTTGTAAT 58.668 45.455 0.00 0.00 0.00 1.89
673 892 3.749609 GTGCCTACGGTGACTTTGTAATT 59.250 43.478 0.00 0.00 0.00 1.40
674 893 4.214758 GTGCCTACGGTGACTTTGTAATTT 59.785 41.667 0.00 0.00 0.00 1.82
675 894 4.822896 TGCCTACGGTGACTTTGTAATTTT 59.177 37.500 0.00 0.00 0.00 1.82
676 895 5.049267 TGCCTACGGTGACTTTGTAATTTTC 60.049 40.000 0.00 0.00 0.00 2.29
677 896 5.049267 GCCTACGGTGACTTTGTAATTTTCA 60.049 40.000 0.00 0.00 0.00 2.69
678 897 6.513720 GCCTACGGTGACTTTGTAATTTTCAA 60.514 38.462 0.00 0.00 0.00 2.69
679 898 7.075741 CCTACGGTGACTTTGTAATTTTCAAG 58.924 38.462 0.00 0.00 0.00 3.02
680 899 6.687081 ACGGTGACTTTGTAATTTTCAAGA 57.313 33.333 0.00 0.00 0.00 3.02
681 900 7.272037 ACGGTGACTTTGTAATTTTCAAGAT 57.728 32.000 0.00 0.00 0.00 2.40
682 901 7.138736 ACGGTGACTTTGTAATTTTCAAGATG 58.861 34.615 0.00 0.00 0.00 2.90
683 902 7.012894 ACGGTGACTTTGTAATTTTCAAGATGA 59.987 33.333 0.00 0.00 0.00 2.92
684 903 8.023128 CGGTGACTTTGTAATTTTCAAGATGAT 58.977 33.333 0.00 0.00 0.00 2.45
689 908 9.807649 ACTTTGTAATTTTCAAGATGATATGCC 57.192 29.630 0.00 0.00 0.00 4.40
690 909 8.854979 TTTGTAATTTTCAAGATGATATGCCG 57.145 30.769 0.00 0.00 0.00 5.69
691 910 7.566760 TGTAATTTTCAAGATGATATGCCGT 57.433 32.000 0.00 0.00 0.00 5.68
692 911 8.669946 TGTAATTTTCAAGATGATATGCCGTA 57.330 30.769 0.00 0.00 0.00 4.02
693 912 9.283768 TGTAATTTTCAAGATGATATGCCGTAT 57.716 29.630 0.00 0.00 0.00 3.06
697 916 6.908870 TTCAAGATGATATGCCGTATATGC 57.091 37.500 0.00 0.00 32.09 3.14
698 917 5.359756 TCAAGATGATATGCCGTATATGCC 58.640 41.667 0.00 0.00 32.09 4.40
699 918 3.982475 AGATGATATGCCGTATATGCCG 58.018 45.455 0.00 0.00 32.09 5.69
700 919 3.636764 AGATGATATGCCGTATATGCCGA 59.363 43.478 0.00 0.00 32.09 5.54
701 920 4.281941 AGATGATATGCCGTATATGCCGAT 59.718 41.667 0.00 0.00 32.09 4.18
702 921 3.977427 TGATATGCCGTATATGCCGATC 58.023 45.455 0.00 0.00 32.09 3.69
703 922 2.485266 TATGCCGTATATGCCGATCG 57.515 50.000 8.51 8.51 0.00 3.69
704 923 0.530744 ATGCCGTATATGCCGATCGT 59.469 50.000 15.09 0.00 0.00 3.73
705 924 0.388006 TGCCGTATATGCCGATCGTG 60.388 55.000 15.09 6.80 0.00 4.35
706 925 0.388134 GCCGTATATGCCGATCGTGT 60.388 55.000 15.09 1.84 0.00 4.49
707 926 1.336877 CCGTATATGCCGATCGTGTG 58.663 55.000 15.09 0.00 0.00 3.82
708 927 1.335597 CCGTATATGCCGATCGTGTGT 60.336 52.381 15.09 0.49 0.00 3.72
709 928 1.713932 CGTATATGCCGATCGTGTGTG 59.286 52.381 15.09 0.00 0.00 3.82
710 929 1.455786 GTATATGCCGATCGTGTGTGC 59.544 52.381 15.09 10.29 0.00 4.57
711 930 0.104855 ATATGCCGATCGTGTGTGCT 59.895 50.000 15.09 3.01 0.00 4.40
712 931 0.527600 TATGCCGATCGTGTGTGCTC 60.528 55.000 15.09 0.00 0.00 4.26
713 932 2.432456 GCCGATCGTGTGTGCTCA 60.432 61.111 15.09 0.00 0.00 4.26
714 933 2.447887 GCCGATCGTGTGTGCTCAG 61.448 63.158 15.09 0.00 0.00 3.35
715 934 1.080501 CCGATCGTGTGTGCTCAGT 60.081 57.895 15.09 0.00 0.00 3.41
716 935 1.073216 CCGATCGTGTGTGCTCAGTC 61.073 60.000 15.09 0.00 0.00 3.51
717 936 0.109551 CGATCGTGTGTGCTCAGTCT 60.110 55.000 7.03 0.00 0.00 3.24
718 937 1.667177 CGATCGTGTGTGCTCAGTCTT 60.667 52.381 7.03 0.00 0.00 3.01
719 938 2.408050 GATCGTGTGTGCTCAGTCTTT 58.592 47.619 0.00 0.00 0.00 2.52
720 939 1.852942 TCGTGTGTGCTCAGTCTTTC 58.147 50.000 0.00 0.00 0.00 2.62
721 940 0.504384 CGTGTGTGCTCAGTCTTTCG 59.496 55.000 0.00 0.00 0.00 3.46
722 941 0.861837 GTGTGTGCTCAGTCTTTCGG 59.138 55.000 0.00 0.00 0.00 4.30
723 942 0.750249 TGTGTGCTCAGTCTTTCGGA 59.250 50.000 0.00 0.00 0.00 4.55
724 943 1.269778 TGTGTGCTCAGTCTTTCGGAG 60.270 52.381 0.00 0.00 40.44 4.63
725 944 0.318441 TGTGCTCAGTCTTTCGGAGG 59.682 55.000 0.00 0.00 38.48 4.30
726 945 0.318762 GTGCTCAGTCTTTCGGAGGT 59.681 55.000 0.00 0.00 38.48 3.85
727 946 0.318441 TGCTCAGTCTTTCGGAGGTG 59.682 55.000 0.00 0.00 38.48 4.00
728 947 1.016653 GCTCAGTCTTTCGGAGGTGC 61.017 60.000 0.00 0.00 38.48 5.01
729 948 0.605589 CTCAGTCTTTCGGAGGTGCT 59.394 55.000 0.00 0.00 35.32 4.40
730 949 0.603569 TCAGTCTTTCGGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
731 950 0.318441 CAGTCTTTCGGAGGTGCTCA 59.682 55.000 0.00 0.00 31.08 4.26
732 951 1.066573 CAGTCTTTCGGAGGTGCTCAT 60.067 52.381 0.00 0.00 31.08 2.90
733 952 2.166459 CAGTCTTTCGGAGGTGCTCATA 59.834 50.000 0.00 0.00 31.08 2.15
734 953 2.428890 AGTCTTTCGGAGGTGCTCATAG 59.571 50.000 0.00 0.00 31.08 2.23
735 954 1.757118 TCTTTCGGAGGTGCTCATAGG 59.243 52.381 0.00 0.00 31.08 2.57
736 955 0.830648 TTTCGGAGGTGCTCATAGGG 59.169 55.000 0.00 0.00 31.08 3.53
737 956 0.032515 TTCGGAGGTGCTCATAGGGA 60.033 55.000 0.00 0.00 31.08 4.20
738 957 0.188587 TCGGAGGTGCTCATAGGGAT 59.811 55.000 0.00 0.00 31.08 3.85
739 958 1.427753 TCGGAGGTGCTCATAGGGATA 59.572 52.381 0.00 0.00 31.08 2.59
740 959 1.821753 CGGAGGTGCTCATAGGGATAG 59.178 57.143 0.00 0.00 31.08 2.08
741 960 2.819726 CGGAGGTGCTCATAGGGATAGT 60.820 54.545 0.00 0.00 31.08 2.12
742 961 2.564947 GGAGGTGCTCATAGGGATAGTG 59.435 54.545 0.00 0.00 31.08 2.74
743 962 3.235200 GAGGTGCTCATAGGGATAGTGT 58.765 50.000 0.00 0.00 0.00 3.55
744 963 2.968574 AGGTGCTCATAGGGATAGTGTG 59.031 50.000 0.00 0.00 0.00 3.82
745 964 2.700897 GGTGCTCATAGGGATAGTGTGT 59.299 50.000 0.00 0.00 0.00 3.72
746 965 3.493350 GGTGCTCATAGGGATAGTGTGTG 60.493 52.174 0.00 0.00 0.00 3.82
747 966 2.103094 TGCTCATAGGGATAGTGTGTGC 59.897 50.000 0.00 0.00 0.00 4.57
748 967 2.864097 GCTCATAGGGATAGTGTGTGCG 60.864 54.545 0.00 0.00 0.00 5.34
749 968 2.362397 CTCATAGGGATAGTGTGTGCGT 59.638 50.000 0.00 0.00 0.00 5.24
750 969 2.764010 TCATAGGGATAGTGTGTGCGTT 59.236 45.455 0.00 0.00 0.00 4.84
751 970 2.953466 TAGGGATAGTGTGTGCGTTC 57.047 50.000 0.00 0.00 0.00 3.95
752 971 0.973632 AGGGATAGTGTGTGCGTTCA 59.026 50.000 0.00 0.00 0.00 3.18
753 972 1.555075 AGGGATAGTGTGTGCGTTCAT 59.445 47.619 0.00 0.00 0.00 2.57
754 973 2.764010 AGGGATAGTGTGTGCGTTCATA 59.236 45.455 0.00 0.00 0.00 2.15
755 974 3.123804 GGGATAGTGTGTGCGTTCATAG 58.876 50.000 0.00 0.00 0.00 2.23
756 975 3.123804 GGATAGTGTGTGCGTTCATAGG 58.876 50.000 0.00 0.00 0.00 2.57
757 976 2.665649 TAGTGTGTGCGTTCATAGGG 57.334 50.000 0.00 0.00 0.00 3.53
758 977 0.973632 AGTGTGTGCGTTCATAGGGA 59.026 50.000 0.00 0.00 0.00 4.20
759 978 1.555075 AGTGTGTGCGTTCATAGGGAT 59.445 47.619 0.00 0.00 0.00 3.85
760 979 1.665679 GTGTGTGCGTTCATAGGGATG 59.334 52.381 0.00 0.00 0.00 3.51
761 980 1.552792 TGTGTGCGTTCATAGGGATGA 59.447 47.619 0.00 0.00 40.45 2.92
762 981 2.205074 GTGTGCGTTCATAGGGATGAG 58.795 52.381 0.00 0.00 43.03 2.90
763 982 1.831106 TGTGCGTTCATAGGGATGAGT 59.169 47.619 0.00 0.00 43.03 3.41
764 983 3.028130 TGTGCGTTCATAGGGATGAGTA 58.972 45.455 0.00 0.00 43.03 2.59
765 984 3.641436 TGTGCGTTCATAGGGATGAGTAT 59.359 43.478 0.00 0.00 43.03 2.12
766 985 4.830600 TGTGCGTTCATAGGGATGAGTATA 59.169 41.667 0.00 0.00 43.03 1.47
767 986 5.480422 TGTGCGTTCATAGGGATGAGTATAT 59.520 40.000 0.00 0.00 43.03 0.86
768 987 5.807520 GTGCGTTCATAGGGATGAGTATATG 59.192 44.000 0.00 0.00 43.03 1.78
769 988 4.806247 GCGTTCATAGGGATGAGTATATGC 59.194 45.833 0.00 0.00 43.03 3.14
770 989 5.037385 CGTTCATAGGGATGAGTATATGCG 58.963 45.833 0.00 0.00 43.03 4.73
771 990 4.655762 TCATAGGGATGAGTATATGCGC 57.344 45.455 0.00 0.00 37.15 6.09
772 991 3.066760 TCATAGGGATGAGTATATGCGCG 59.933 47.826 0.00 0.00 37.15 6.86
773 992 1.257743 AGGGATGAGTATATGCGCGT 58.742 50.000 8.43 7.55 0.00 6.01
774 993 1.067565 AGGGATGAGTATATGCGCGTG 60.068 52.381 13.61 0.00 0.00 5.34
775 994 1.336887 GGGATGAGTATATGCGCGTGT 60.337 52.381 13.61 8.52 0.00 4.49
776 995 2.094906 GGGATGAGTATATGCGCGTGTA 60.095 50.000 13.61 7.27 0.00 2.90
777 996 3.428999 GGGATGAGTATATGCGCGTGTAT 60.429 47.826 13.61 9.22 0.00 2.29
778 997 4.201980 GGGATGAGTATATGCGCGTGTATA 60.202 45.833 13.61 9.23 0.00 1.47
779 998 5.507482 GGGATGAGTATATGCGCGTGTATAT 60.507 44.000 20.79 20.79 37.23 0.86
780 999 5.399596 GGATGAGTATATGCGCGTGTATATG 59.600 44.000 24.28 0.00 34.71 1.78
781 1000 5.554822 TGAGTATATGCGCGTGTATATGA 57.445 39.130 24.28 9.82 34.71 2.15
782 1001 5.569413 TGAGTATATGCGCGTGTATATGAG 58.431 41.667 24.28 0.00 34.71 2.90
783 1002 4.352039 AGTATATGCGCGTGTATATGAGC 58.648 43.478 24.28 15.73 38.85 4.26
788 1007 2.264207 CGCGTGTATATGAGCGTTTG 57.736 50.000 0.00 0.00 46.48 2.93
789 1008 1.653679 CGCGTGTATATGAGCGTTTGC 60.654 52.381 0.00 0.00 46.48 3.68
800 1019 2.222592 GCGTTTGCGTCTGTACTGT 58.777 52.632 0.00 0.00 40.81 3.55
801 1020 0.111266 GCGTTTGCGTCTGTACTGTG 60.111 55.000 0.00 0.00 40.81 3.66
802 1021 1.205657 CGTTTGCGTCTGTACTGTGT 58.794 50.000 0.00 0.00 0.00 3.72
803 1022 1.591158 CGTTTGCGTCTGTACTGTGTT 59.409 47.619 0.00 0.00 0.00 3.32
804 1023 2.790448 CGTTTGCGTCTGTACTGTGTTA 59.210 45.455 0.00 0.00 0.00 2.41
805 1024 3.243410 CGTTTGCGTCTGTACTGTGTTAA 59.757 43.478 0.00 0.00 0.00 2.01
806 1025 4.259890 CGTTTGCGTCTGTACTGTGTTAAA 60.260 41.667 0.00 0.00 0.00 1.52
807 1026 5.561993 GTTTGCGTCTGTACTGTGTTAAAA 58.438 37.500 0.00 0.00 0.00 1.52
808 1027 5.398176 TTGCGTCTGTACTGTGTTAAAAG 57.602 39.130 0.00 0.00 0.00 2.27
809 1028 4.684877 TGCGTCTGTACTGTGTTAAAAGA 58.315 39.130 0.00 0.00 0.00 2.52
810 1029 5.110598 TGCGTCTGTACTGTGTTAAAAGAA 58.889 37.500 0.00 0.00 0.00 2.52
811 1030 5.581479 TGCGTCTGTACTGTGTTAAAAGAAA 59.419 36.000 0.00 0.00 0.00 2.52
846 1065 2.969950 CCATGATGGCATTCCCTCAAAT 59.030 45.455 0.00 0.00 39.82 2.32
851 1070 5.976458 TGATGGCATTCCCTCAAATAAAAC 58.024 37.500 0.00 0.00 34.64 2.43
957 2372 1.043673 CGACCCCAAAACCCCAAACA 61.044 55.000 0.00 0.00 0.00 2.83
959 2374 0.983905 ACCCCAAAACCCCAAACACC 60.984 55.000 0.00 0.00 0.00 4.16
983 2398 4.315941 CTATTCCCCTCCGCCGCC 62.316 72.222 0.00 0.00 0.00 6.13
984 2399 4.872574 TATTCCCCTCCGCCGCCT 62.873 66.667 0.00 0.00 0.00 5.52
985 2400 3.455757 TATTCCCCTCCGCCGCCTA 62.456 63.158 0.00 0.00 0.00 3.93
1033 2448 4.075793 CCTCCTCCCTCCCGACCA 62.076 72.222 0.00 0.00 0.00 4.02
1203 2618 1.725557 GCGCTGTCATACTCTCCGGA 61.726 60.000 2.93 2.93 0.00 5.14
1373 2788 1.007618 GGCAGGAGTACGGCGATAC 60.008 63.158 16.62 12.57 41.53 2.24
1743 3279 0.536460 GGCGACCTGTCCTTTTTCCA 60.536 55.000 0.00 0.00 0.00 3.53
1847 3995 0.953960 GGGTAGCGGGTTGTGTCTTG 60.954 60.000 0.00 0.00 0.00 3.02
2112 4359 0.179702 TCAGGATGTGCTGGATGAGC 59.820 55.000 1.62 0.00 41.47 4.26
2246 4493 6.363357 GTGATAGGCTTCATTGTGTTTTTGTC 59.637 38.462 0.00 0.00 0.00 3.18
2835 5089 7.141758 TGAAAGATAGCTCATACTGGGAAAT 57.858 36.000 0.00 0.00 0.00 2.17
2955 5210 7.698163 AATATCCCAGAGTCATTCTTAAGGT 57.302 36.000 1.85 0.00 32.41 3.50
3077 5332 9.844257 TTTTGAACCATTGGTTTCTAAATCATT 57.156 25.926 21.66 0.00 46.95 2.57
3380 5655 3.066342 TCGTACTCTAATGGTGCACTAGC 59.934 47.826 17.98 0.00 42.57 3.42
3393 5668 2.613595 TGCACTAGCTGGCGATATTTTG 59.386 45.455 0.00 0.00 42.74 2.44
3460 5736 3.141398 TGCCTTTTAGCTCAGTGTTCTG 58.859 45.455 0.00 0.00 42.54 3.02
3480 5756 2.100197 GGAACAATACTTGGGCTTCCC 58.900 52.381 0.00 0.00 45.71 3.97
3577 5853 3.278574 TCACCTATGTTACATTGCCTGC 58.721 45.455 2.23 0.00 0.00 4.85
3615 5891 1.413812 GGCCAGCCCAAAATCCATAAG 59.586 52.381 0.00 0.00 0.00 1.73
3645 5921 7.656137 CCTCAGTTGTAATGTACAGTTACAGTT 59.344 37.037 20.29 14.30 41.62 3.16
3813 6089 4.696899 AGGATTGTTTTTAGCGCCTTAC 57.303 40.909 2.29 0.00 0.00 2.34
3902 6178 7.879160 ACCGATGTTTCTGTTATTTGGTAACTA 59.121 33.333 0.00 0.00 42.58 2.24
4114 6393 0.106918 AACCGTGTTTGCCTGGAGAA 60.107 50.000 0.00 0.00 0.00 2.87
4161 6440 4.140782 TGGAGTGGGAATAGCCTGATAGTA 60.141 45.833 0.00 0.00 36.66 1.82
4174 6453 4.499357 GCCTGATAGTACACTAAAGGACCG 60.499 50.000 18.75 1.50 38.02 4.79
4258 6537 7.251994 TCATTTAACACATAACGCCAATTACC 58.748 34.615 0.00 0.00 0.00 2.85
4260 6539 4.695217 AACACATAACGCCAATTACCAG 57.305 40.909 0.00 0.00 0.00 4.00
4269 6548 4.016444 ACGCCAATTACCAGATCATTGTT 58.984 39.130 0.00 0.00 0.00 2.83
4271 6550 5.650266 ACGCCAATTACCAGATCATTGTTTA 59.350 36.000 0.00 0.00 0.00 2.01
4275 6554 6.461509 CCAATTACCAGATCATTGTTTAGGGC 60.462 42.308 0.00 0.00 0.00 5.19
4284 6563 5.296151 TCATTGTTTAGGGCTCCTAGATG 57.704 43.478 0.00 5.79 37.42 2.90
4285 6564 4.968719 TCATTGTTTAGGGCTCCTAGATGA 59.031 41.667 0.00 7.40 37.42 2.92
4334 6613 8.194104 TCAAAGCTTTGAAACTGCACTTATAAA 58.806 29.630 34.01 9.85 43.62 1.40
4338 6617 8.143835 AGCTTTGAAACTGCACTTATAAATGTT 58.856 29.630 0.00 0.00 0.00 2.71
4381 6660 1.627297 CCCCGCCTTTCTAGAGCCTT 61.627 60.000 0.00 0.00 0.00 4.35
4391 6670 1.975680 TCTAGAGCCTTTTGGACGGTT 59.024 47.619 0.00 0.00 44.07 4.44
4398 6677 3.262405 AGCCTTTTGGACGGTTGTATCTA 59.738 43.478 0.00 0.00 44.07 1.98
4403 6682 3.965379 TGGACGGTTGTATCTAGCAAA 57.035 42.857 0.00 0.00 0.00 3.68
4431 6710 9.732130 TTATAGCAATACCACATATGTAATGCA 57.268 29.630 21.85 13.62 44.00 3.96
4434 6713 6.547141 AGCAATACCACATATGTAATGCAAGT 59.453 34.615 21.85 10.47 44.00 3.16
4472 6751 5.473066 AGCAGTGATGGTTTTAGCAAATT 57.527 34.783 0.00 0.00 0.00 1.82
4477 6756 7.254727 GCAGTGATGGTTTTAGCAAATTCAAAA 60.255 33.333 0.00 0.00 0.00 2.44
4479 6758 8.992073 AGTGATGGTTTTAGCAAATTCAAAATC 58.008 29.630 0.00 0.00 0.00 2.17
4524 6803 4.022068 CACTTTTGATGGCACTATGTTGGT 60.022 41.667 0.00 0.00 0.00 3.67
4537 6816 6.816640 GCACTATGTTGGTCTAATGACAACTA 59.183 38.462 8.06 0.00 44.61 2.24
4595 6874 2.362077 GGCGCTCCCAATACATCAATTT 59.638 45.455 7.64 0.00 0.00 1.82
4638 6917 7.573710 TGTATGTTAGTGGAGATATGGCTTTT 58.426 34.615 0.00 0.00 0.00 2.27
4639 6918 8.710239 TGTATGTTAGTGGAGATATGGCTTTTA 58.290 33.333 0.00 0.00 0.00 1.52
4640 6919 9.555727 GTATGTTAGTGGAGATATGGCTTTTAA 57.444 33.333 0.00 0.00 0.00 1.52
4641 6920 7.859325 TGTTAGTGGAGATATGGCTTTTAAC 57.141 36.000 0.00 0.00 0.00 2.01
4642 6921 7.630082 TGTTAGTGGAGATATGGCTTTTAACT 58.370 34.615 0.00 0.00 0.00 2.24
4648 6927 8.736244 GTGGAGATATGGCTTTTAACTTGTTTA 58.264 33.333 0.00 0.00 0.00 2.01
4656 6935 6.547880 TGGCTTTTAACTTGTTTATCTCCACA 59.452 34.615 0.00 0.00 0.00 4.17
4673 6952 4.647611 TCCACAGTATAATTAATGCCCCG 58.352 43.478 0.00 0.00 0.00 5.73
4678 6957 6.092670 CACAGTATAATTAATGCCCCGATCTG 59.907 42.308 0.00 0.00 0.00 2.90
4679 6958 5.586243 CAGTATAATTAATGCCCCGATCTGG 59.414 44.000 0.00 0.00 37.55 3.86
4697 6976 7.363431 CGATCTGGCCTTTTTCCTTATATTTC 58.637 38.462 3.32 0.00 0.00 2.17
4701 6980 8.116026 TCTGGCCTTTTTCCTTATATTTCTCTT 58.884 33.333 3.32 0.00 0.00 2.85
4703 6982 8.749354 TGGCCTTTTTCCTTATATTTCTCTTTC 58.251 33.333 3.32 0.00 0.00 2.62
4704 6983 8.749354 GGCCTTTTTCCTTATATTTCTCTTTCA 58.251 33.333 0.00 0.00 0.00 2.69
4705 6984 9.574458 GCCTTTTTCCTTATATTTCTCTTTCAC 57.426 33.333 0.00 0.00 0.00 3.18
4747 7026 5.817784 ACACTTCTCTCTACAACTAGCCTA 58.182 41.667 0.00 0.00 0.00 3.93
4753 7032 6.424032 TCTCTCTACAACTAGCCTACATGAA 58.576 40.000 0.00 0.00 0.00 2.57
4775 7054 6.880529 TGAAGATGCACATGTGATCTCTAAAA 59.119 34.615 29.80 13.78 31.72 1.52
4779 7058 6.822667 TGCACATGTGATCTCTAAAACAAT 57.177 33.333 29.80 0.00 0.00 2.71
4802 7081 7.675962 ATTGCATGCAACATCACTTAAAAAT 57.324 28.000 34.10 11.27 38.88 1.82
4826 7105 5.138125 ACACCTAAAAGACAATGCATTGG 57.862 39.130 35.85 21.61 41.96 3.16
4871 7153 1.745653 GTCTAAGGGCAACTCCAATGC 59.254 52.381 0.00 0.00 43.08 3.56
4890 7172 2.421775 TGCCGTGCATTAAATCGAACAT 59.578 40.909 0.00 0.00 31.71 2.71
4899 7181 7.487829 GTGCATTAAATCGAACATACCAAACAT 59.512 33.333 0.00 0.00 0.00 2.71
4900 7182 7.700234 TGCATTAAATCGAACATACCAAACATC 59.300 33.333 0.00 0.00 0.00 3.06
4901 7183 7.915397 GCATTAAATCGAACATACCAAACATCT 59.085 33.333 0.00 0.00 0.00 2.90
4902 7184 9.225201 CATTAAATCGAACATACCAAACATCTG 57.775 33.333 0.00 0.00 0.00 2.90
4915 7197 1.294780 CATCTGCGGATAGGGAGGC 59.705 63.158 7.96 0.00 0.00 4.70
4921 7203 2.930562 GGATAGGGAGGCGGGCAT 60.931 66.667 3.78 0.00 0.00 4.40
4927 7209 2.361104 GGAGGCGGGCATCAAACA 60.361 61.111 7.66 0.00 0.00 2.83
4931 7213 2.051518 GGCGGGCATCAAACATCCA 61.052 57.895 0.00 0.00 0.00 3.41
4940 7222 4.325972 GCATCAAACATCCAACCCATTTT 58.674 39.130 0.00 0.00 0.00 1.82
4942 7224 5.581874 GCATCAAACATCCAACCCATTTTAG 59.418 40.000 0.00 0.00 0.00 1.85
4948 7230 3.062122 TCCAACCCATTTTAGACGGAC 57.938 47.619 0.00 0.00 0.00 4.79
4952 7234 1.066645 ACCCATTTTAGACGGACGGAC 60.067 52.381 0.00 0.00 0.00 4.79
5016 7298 9.793252 GATATACTTACAACTACAAGGACGAAA 57.207 33.333 0.00 0.00 0.00 3.46
5025 7307 6.687081 ACTACAAGGACGAAATTCAACAAA 57.313 33.333 0.00 0.00 0.00 2.83
5026 7308 7.272037 ACTACAAGGACGAAATTCAACAAAT 57.728 32.000 0.00 0.00 0.00 2.32
5031 7313 3.911964 GGACGAAATTCAACAAATCGGTG 59.088 43.478 0.00 0.00 37.81 4.94
5039 7321 1.472480 CAACAAATCGGTGGACCCATC 59.528 52.381 0.00 0.00 0.00 3.51
5047 7329 1.442148 GTGGACCCATCGTAGAGGC 59.558 63.158 0.00 0.00 43.63 4.70
5064 7346 1.000396 GCTGATTGGCCCCAGAGTT 60.000 57.895 17.77 0.00 32.37 3.01
5067 7349 2.250924 CTGATTGGCCCCAGAGTTTTT 58.749 47.619 0.00 0.00 32.37 1.94
5068 7350 1.969923 TGATTGGCCCCAGAGTTTTTG 59.030 47.619 0.00 0.00 0.00 2.44
5069 7351 2.247358 GATTGGCCCCAGAGTTTTTGA 58.753 47.619 0.00 0.00 0.00 2.69
5070 7352 2.397044 TTGGCCCCAGAGTTTTTGAT 57.603 45.000 0.00 0.00 0.00 2.57
5071 7353 1.631405 TGGCCCCAGAGTTTTTGATG 58.369 50.000 0.00 0.00 0.00 3.07
5072 7354 1.133199 TGGCCCCAGAGTTTTTGATGT 60.133 47.619 0.00 0.00 0.00 3.06
5089 7371 4.160329 TGATGTAGTCTGGGTTCTTCACT 58.840 43.478 0.00 0.00 0.00 3.41
5101 7383 4.218635 GGGTTCTTCACTTTCAGGATTTCC 59.781 45.833 0.00 0.00 0.00 3.13
5123 7405 9.521841 TTTCCCATTTGAAAAGGTTAAAACTTT 57.478 25.926 0.00 0.00 39.69 2.66
5125 7407 9.825109 TCCCATTTGAAAAGGTTAAAACTTTAG 57.175 29.630 6.79 0.00 37.18 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.145338 AGCCGTTCGATCTAGATTTCTTAA 57.855 37.500 6.70 0.00 0.00 1.85
1 2 5.759963 GAGCCGTTCGATCTAGATTTCTTA 58.240 41.667 6.70 0.00 0.00 2.10
2 3 4.612943 GAGCCGTTCGATCTAGATTTCTT 58.387 43.478 6.70 0.00 0.00 2.52
3 4 4.231718 GAGCCGTTCGATCTAGATTTCT 57.768 45.455 6.70 0.00 0.00 2.52
26 27 2.071844 TAAAGATCCGCCGCCTCTCG 62.072 60.000 0.00 0.00 38.08 4.04
27 28 0.104304 TTAAAGATCCGCCGCCTCTC 59.896 55.000 0.00 0.00 0.00 3.20
28 29 0.539986 TTTAAAGATCCGCCGCCTCT 59.460 50.000 0.00 0.00 0.00 3.69
29 30 1.330829 CTTTTAAAGATCCGCCGCCTC 59.669 52.381 0.00 0.00 0.00 4.70
30 31 1.065709 TCTTTTAAAGATCCGCCGCCT 60.066 47.619 2.94 0.00 31.20 5.52
31 32 1.375551 TCTTTTAAAGATCCGCCGCC 58.624 50.000 2.94 0.00 31.20 6.13
32 33 3.481112 TTTCTTTTAAAGATCCGCCGC 57.519 42.857 8.31 0.00 37.38 6.53
33 34 4.598062 GGATTTCTTTTAAAGATCCGCCG 58.402 43.478 8.31 0.00 37.38 6.46
34 35 4.598062 CGGATTTCTTTTAAAGATCCGCC 58.402 43.478 26.34 16.42 46.77 6.13
37 38 4.497507 CCGGCGGATTTCTTTTAAAGATCC 60.498 45.833 24.41 14.26 37.38 3.36
38 39 4.598062 CCGGCGGATTTCTTTTAAAGATC 58.402 43.478 24.41 4.20 37.38 2.75
39 40 3.181490 GCCGGCGGATTTCTTTTAAAGAT 60.181 43.478 33.44 0.00 37.38 2.40
40 41 2.162809 GCCGGCGGATTTCTTTTAAAGA 59.837 45.455 33.44 2.94 35.26 2.52
41 42 2.163613 AGCCGGCGGATTTCTTTTAAAG 59.836 45.455 33.44 0.00 0.00 1.85
42 43 2.094957 CAGCCGGCGGATTTCTTTTAAA 60.095 45.455 33.44 0.00 0.00 1.52
43 44 1.470890 CAGCCGGCGGATTTCTTTTAA 59.529 47.619 33.44 0.00 0.00 1.52
44 45 1.091537 CAGCCGGCGGATTTCTTTTA 58.908 50.000 33.44 0.00 0.00 1.52
45 46 0.608035 TCAGCCGGCGGATTTCTTTT 60.608 50.000 33.44 0.00 0.00 2.27
46 47 1.002624 TCAGCCGGCGGATTTCTTT 60.003 52.632 33.44 0.00 0.00 2.52
47 48 1.745489 GTCAGCCGGCGGATTTCTT 60.745 57.895 31.70 3.15 0.00 2.52
48 49 2.125106 GTCAGCCGGCGGATTTCT 60.125 61.111 31.70 14.79 0.00 2.52
49 50 3.564027 CGTCAGCCGGCGGATTTC 61.564 66.667 31.70 18.05 0.00 2.17
67 68 4.091509 ACAATAAGAAAAGAGCGTGCTACG 59.908 41.667 0.00 4.61 45.88 3.51
68 69 5.532025 ACAATAAGAAAAGAGCGTGCTAC 57.468 39.130 0.00 0.00 0.00 3.58
69 70 6.554334 AAACAATAAGAAAAGAGCGTGCTA 57.446 33.333 0.00 0.00 0.00 3.49
70 71 5.438761 AAACAATAAGAAAAGAGCGTGCT 57.561 34.783 0.00 0.00 0.00 4.40
71 72 6.510746 AAAAACAATAAGAAAAGAGCGTGC 57.489 33.333 0.00 0.00 0.00 5.34
125 126 9.983024 TGATGGTAAGAGTTTCCCATAAAATAA 57.017 29.630 0.00 0.00 37.81 1.40
126 127 9.403583 GTGATGGTAAGAGTTTCCCATAAAATA 57.596 33.333 0.00 0.00 37.81 1.40
127 128 7.342026 GGTGATGGTAAGAGTTTCCCATAAAAT 59.658 37.037 0.00 0.00 37.81 1.82
128 129 6.661805 GGTGATGGTAAGAGTTTCCCATAAAA 59.338 38.462 0.00 0.00 37.81 1.52
129 130 6.184789 GGTGATGGTAAGAGTTTCCCATAAA 58.815 40.000 0.00 0.00 37.81 1.40
130 131 5.339695 GGGTGATGGTAAGAGTTTCCCATAA 60.340 44.000 0.00 0.00 37.81 1.90
131 132 4.165372 GGGTGATGGTAAGAGTTTCCCATA 59.835 45.833 0.00 0.00 37.81 2.74
132 133 3.053619 GGGTGATGGTAAGAGTTTCCCAT 60.054 47.826 0.00 0.00 40.34 4.00
133 134 2.307686 GGGTGATGGTAAGAGTTTCCCA 59.692 50.000 0.00 0.00 33.33 4.37
134 135 2.679930 CGGGTGATGGTAAGAGTTTCCC 60.680 54.545 0.00 0.00 0.00 3.97
135 136 2.235402 TCGGGTGATGGTAAGAGTTTCC 59.765 50.000 0.00 0.00 0.00 3.13
136 137 3.604875 TCGGGTGATGGTAAGAGTTTC 57.395 47.619 0.00 0.00 0.00 2.78
137 138 3.873910 CATCGGGTGATGGTAAGAGTTT 58.126 45.455 0.00 0.00 46.76 2.66
138 139 3.543680 CATCGGGTGATGGTAAGAGTT 57.456 47.619 0.00 0.00 46.76 3.01
150 151 0.109781 CAAGTTTTCGCCATCGGGTG 60.110 55.000 0.00 0.00 46.45 4.61
151 152 1.241315 CCAAGTTTTCGCCATCGGGT 61.241 55.000 0.00 0.00 36.17 5.28
152 153 1.241315 ACCAAGTTTTCGCCATCGGG 61.241 55.000 0.00 0.00 36.13 5.14
153 154 0.596082 AACCAAGTTTTCGCCATCGG 59.404 50.000 0.00 0.00 36.13 4.18
154 155 2.287308 TGAAACCAAGTTTTCGCCATCG 60.287 45.455 0.00 0.00 38.17 3.84
155 156 3.363341 TGAAACCAAGTTTTCGCCATC 57.637 42.857 0.00 0.00 38.17 3.51
156 157 5.659440 ATATGAAACCAAGTTTTCGCCAT 57.341 34.783 0.00 0.00 38.17 4.40
157 158 6.767524 ATATATGAAACCAAGTTTTCGCCA 57.232 33.333 0.00 0.00 38.17 5.69
158 159 7.220108 GTGAATATATGAAACCAAGTTTTCGCC 59.780 37.037 0.00 0.00 38.17 5.54
159 160 7.753132 TGTGAATATATGAAACCAAGTTTTCGC 59.247 33.333 0.00 0.00 38.17 4.70
160 161 9.619316 TTGTGAATATATGAAACCAAGTTTTCG 57.381 29.630 0.00 0.00 38.17 3.46
278 281 3.591196 AAATCATAGCCAGCGCAAAAA 57.409 38.095 11.47 0.00 37.52 1.94
279 282 4.337836 TGATAAATCATAGCCAGCGCAAAA 59.662 37.500 11.47 0.00 37.52 2.44
280 283 3.882288 TGATAAATCATAGCCAGCGCAAA 59.118 39.130 11.47 0.00 37.52 3.68
281 284 3.475575 TGATAAATCATAGCCAGCGCAA 58.524 40.909 11.47 0.00 37.52 4.85
282 285 3.124578 TGATAAATCATAGCCAGCGCA 57.875 42.857 11.47 0.00 37.52 6.09
283 286 4.691860 ATTGATAAATCATAGCCAGCGC 57.308 40.909 0.00 0.00 36.56 5.92
284 287 8.206325 AGATAATTGATAAATCATAGCCAGCG 57.794 34.615 0.00 0.00 36.56 5.18
294 512 8.827177 TGGGTCGTGTAGATAATTGATAAATC 57.173 34.615 0.00 0.00 0.00 2.17
300 518 7.287005 AGTCTTATGGGTCGTGTAGATAATTGA 59.713 37.037 0.00 0.00 0.00 2.57
314 532 4.220163 CCGGTAAGGATAGTCTTATGGGTC 59.780 50.000 0.00 0.00 45.00 4.46
331 549 1.595466 AAAATGCACACGACCGGTAA 58.405 45.000 7.34 0.00 0.00 2.85
334 552 0.309302 TGAAAAATGCACACGACCGG 59.691 50.000 0.00 0.00 0.00 5.28
336 554 3.281341 TCATGAAAAATGCACACGACC 57.719 42.857 0.00 0.00 0.00 4.79
350 569 1.739035 GCGAAGTGGGACGATCATGAA 60.739 52.381 0.00 0.00 0.00 2.57
353 572 0.103208 GAGCGAAGTGGGACGATCAT 59.897 55.000 0.00 0.00 42.96 2.45
388 607 0.177836 TTCCATGATGCCGATCGTGT 59.822 50.000 15.09 0.00 42.13 4.49
403 622 4.273257 TCACTCGCGCGTGTTCCA 62.273 61.111 32.17 17.54 36.33 3.53
406 625 4.942481 TGCTCACTCGCGCGTGTT 62.942 61.111 32.17 16.46 36.33 3.32
416 635 1.160329 GGTCTTGCAACGTGCTCACT 61.160 55.000 0.00 0.00 45.31 3.41
429 648 2.031157 GGTCGGTCACAATTTGGTCTTG 60.031 50.000 0.78 0.00 0.00 3.02
433 652 1.314730 GTGGTCGGTCACAATTTGGT 58.685 50.000 0.78 0.00 37.57 3.67
441 660 3.587797 TTCTATTCTGTGGTCGGTCAC 57.412 47.619 2.79 2.79 38.09 3.67
444 663 6.001460 TCAAATTTTCTATTCTGTGGTCGGT 58.999 36.000 0.00 0.00 0.00 4.69
445 664 6.494893 TCAAATTTTCTATTCTGTGGTCGG 57.505 37.500 0.00 0.00 0.00 4.79
447 666 9.780413 GATCTTCAAATTTTCTATTCTGTGGTC 57.220 33.333 0.00 0.00 0.00 4.02
453 672 9.883142 AGTCGAGATCTTCAAATTTTCTATTCT 57.117 29.630 0.00 0.00 0.00 2.40
463 682 5.991606 TGTTGTTGAGTCGAGATCTTCAAAT 59.008 36.000 8.75 0.00 0.00 2.32
465 684 4.944048 TGTTGTTGAGTCGAGATCTTCAA 58.056 39.130 0.00 0.00 0.00 2.69
486 705 5.151389 GTTGGTTCGCCTACTTTATTGTTG 58.849 41.667 0.00 0.00 39.42 3.33
508 727 3.716872 CCTCTAACCATCCAACCATAGGT 59.283 47.826 0.00 0.00 37.65 3.08
509 728 3.073062 CCCTCTAACCATCCAACCATAGG 59.927 52.174 0.00 0.00 0.00 2.57
510 729 3.973973 TCCCTCTAACCATCCAACCATAG 59.026 47.826 0.00 0.00 0.00 2.23
511 730 3.714798 GTCCCTCTAACCATCCAACCATA 59.285 47.826 0.00 0.00 0.00 2.74
512 731 2.509964 GTCCCTCTAACCATCCAACCAT 59.490 50.000 0.00 0.00 0.00 3.55
513 732 1.913419 GTCCCTCTAACCATCCAACCA 59.087 52.381 0.00 0.00 0.00 3.67
514 733 2.197465 AGTCCCTCTAACCATCCAACC 58.803 52.381 0.00 0.00 0.00 3.77
515 734 4.202367 CCATAGTCCCTCTAACCATCCAAC 60.202 50.000 0.00 0.00 31.94 3.77
516 735 3.973973 CCATAGTCCCTCTAACCATCCAA 59.026 47.826 0.00 0.00 31.94 3.53
517 736 3.051341 ACCATAGTCCCTCTAACCATCCA 60.051 47.826 0.00 0.00 31.94 3.41
518 737 3.588569 ACCATAGTCCCTCTAACCATCC 58.411 50.000 0.00 0.00 31.94 3.51
519 738 5.422650 GGATACCATAGTCCCTCTAACCATC 59.577 48.000 0.00 0.00 31.94 3.51
520 739 5.342866 GGATACCATAGTCCCTCTAACCAT 58.657 45.833 0.00 0.00 31.94 3.55
521 740 4.748701 GGATACCATAGTCCCTCTAACCA 58.251 47.826 0.00 0.00 31.94 3.67
538 757 2.757124 CCCTGTGGGCTGGGGATAC 61.757 68.421 0.00 0.00 46.56 2.24
539 758 2.368192 CCCTGTGGGCTGGGGATA 60.368 66.667 0.00 0.00 46.56 2.59
549 768 0.250901 CCAGGACTTGAACCCTGTGG 60.251 60.000 0.00 0.00 46.47 4.17
550 769 0.474184 ACCAGGACTTGAACCCTGTG 59.526 55.000 0.00 0.00 46.47 3.66
551 770 0.474184 CACCAGGACTTGAACCCTGT 59.526 55.000 0.00 0.00 46.47 4.00
553 772 1.062488 AGCACCAGGACTTGAACCCT 61.062 55.000 0.00 0.00 0.00 4.34
554 773 0.606673 GAGCACCAGGACTTGAACCC 60.607 60.000 0.00 0.00 0.00 4.11
555 774 0.951040 CGAGCACCAGGACTTGAACC 60.951 60.000 0.00 0.00 0.00 3.62
556 775 1.569479 GCGAGCACCAGGACTTGAAC 61.569 60.000 0.00 0.00 0.00 3.18
557 776 1.301716 GCGAGCACCAGGACTTGAA 60.302 57.895 0.00 0.00 0.00 2.69
558 777 2.343758 GCGAGCACCAGGACTTGA 59.656 61.111 0.00 0.00 0.00 3.02
559 778 2.738213 AAGGCGAGCACCAGGACTTG 62.738 60.000 0.00 0.00 0.00 3.16
560 779 2.056906 AAAGGCGAGCACCAGGACTT 62.057 55.000 0.00 0.00 0.00 3.01
561 780 1.192146 TAAAGGCGAGCACCAGGACT 61.192 55.000 0.00 0.00 0.00 3.85
562 781 0.107654 ATAAAGGCGAGCACCAGGAC 60.108 55.000 0.00 0.00 0.00 3.85
563 782 0.618458 AATAAAGGCGAGCACCAGGA 59.382 50.000 0.00 0.00 0.00 3.86
564 783 1.017387 GAATAAAGGCGAGCACCAGG 58.983 55.000 0.00 0.00 0.00 4.45
565 784 1.017387 GGAATAAAGGCGAGCACCAG 58.983 55.000 0.00 0.00 0.00 4.00
566 785 0.618458 AGGAATAAAGGCGAGCACCA 59.382 50.000 0.00 0.00 0.00 4.17
567 786 1.017387 CAGGAATAAAGGCGAGCACC 58.983 55.000 0.00 0.00 0.00 5.01
568 787 1.017387 CCAGGAATAAAGGCGAGCAC 58.983 55.000 0.00 0.00 0.00 4.40
569 788 0.908910 TCCAGGAATAAAGGCGAGCA 59.091 50.000 0.00 0.00 0.00 4.26
570 789 2.262423 ATCCAGGAATAAAGGCGAGC 57.738 50.000 0.00 0.00 0.00 5.03
571 790 6.884280 AATAAATCCAGGAATAAAGGCGAG 57.116 37.500 0.00 0.00 0.00 5.03
572 791 6.831353 TGAAATAAATCCAGGAATAAAGGCGA 59.169 34.615 0.00 0.00 0.00 5.54
573 792 7.013274 TCTGAAATAAATCCAGGAATAAAGGCG 59.987 37.037 0.00 0.00 0.00 5.52
574 793 8.237811 TCTGAAATAAATCCAGGAATAAAGGC 57.762 34.615 0.00 0.00 0.00 4.35
580 799 8.416329 CGGAAATTCTGAAATAAATCCAGGAAT 58.584 33.333 0.00 0.00 0.00 3.01
581 800 7.147915 CCGGAAATTCTGAAATAAATCCAGGAA 60.148 37.037 2.89 0.00 0.00 3.36
582 801 6.321181 CCGGAAATTCTGAAATAAATCCAGGA 59.679 38.462 2.89 0.00 0.00 3.86
583 802 6.507023 CCGGAAATTCTGAAATAAATCCAGG 58.493 40.000 2.89 1.89 0.00 4.45
584 803 5.979517 GCCGGAAATTCTGAAATAAATCCAG 59.020 40.000 5.05 0.00 0.00 3.86
585 804 5.449862 CGCCGGAAATTCTGAAATAAATCCA 60.450 40.000 5.05 0.00 0.00 3.41
586 805 4.976116 CGCCGGAAATTCTGAAATAAATCC 59.024 41.667 5.05 0.00 0.00 3.01
587 806 5.816919 TCGCCGGAAATTCTGAAATAAATC 58.183 37.500 5.05 0.00 0.00 2.17
588 807 5.828299 TCGCCGGAAATTCTGAAATAAAT 57.172 34.783 5.05 0.00 0.00 1.40
589 808 5.577835 CATCGCCGGAAATTCTGAAATAAA 58.422 37.500 5.05 0.00 0.00 1.40
590 809 4.497340 GCATCGCCGGAAATTCTGAAATAA 60.497 41.667 5.05 0.00 0.00 1.40
591 810 3.003275 GCATCGCCGGAAATTCTGAAATA 59.997 43.478 5.05 0.00 0.00 1.40
592 811 2.223572 GCATCGCCGGAAATTCTGAAAT 60.224 45.455 5.05 0.00 0.00 2.17
593 812 1.132262 GCATCGCCGGAAATTCTGAAA 59.868 47.619 5.05 0.00 0.00 2.69
594 813 0.732571 GCATCGCCGGAAATTCTGAA 59.267 50.000 5.05 0.00 0.00 3.02
595 814 1.428370 CGCATCGCCGGAAATTCTGA 61.428 55.000 5.05 0.00 0.00 3.27
596 815 1.010797 CGCATCGCCGGAAATTCTG 60.011 57.895 5.05 0.00 0.00 3.02
597 816 3.409856 CGCATCGCCGGAAATTCT 58.590 55.556 5.05 0.00 0.00 2.40
608 827 1.769098 CTCCCACTGAATGCGCATCG 61.769 60.000 25.53 17.09 0.00 3.84
609 828 1.442526 CCTCCCACTGAATGCGCATC 61.443 60.000 25.53 17.12 0.00 3.91
610 829 1.452651 CCTCCCACTGAATGCGCAT 60.453 57.895 19.28 19.28 0.00 4.73
611 830 2.046023 CCTCCCACTGAATGCGCA 60.046 61.111 14.96 14.96 0.00 6.09
612 831 1.817099 CTCCTCCCACTGAATGCGC 60.817 63.158 0.00 0.00 0.00 6.09
613 832 0.460987 GTCTCCTCCCACTGAATGCG 60.461 60.000 0.00 0.00 0.00 4.73
614 833 0.460987 CGTCTCCTCCCACTGAATGC 60.461 60.000 0.00 0.00 0.00 3.56
615 834 0.898320 ACGTCTCCTCCCACTGAATG 59.102 55.000 0.00 0.00 0.00 2.67
616 835 1.550976 GAACGTCTCCTCCCACTGAAT 59.449 52.381 0.00 0.00 0.00 2.57
617 836 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
618 837 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
619 838 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
620 839 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
639 858 2.393768 TAGGCACCTCGTCGTCGAC 61.394 63.158 15.51 15.51 41.35 4.20
640 859 2.046988 TAGGCACCTCGTCGTCGA 60.047 61.111 4.42 4.42 44.12 4.20
641 860 2.099831 GTAGGCACCTCGTCGTCG 59.900 66.667 0.00 0.00 38.55 5.12
642 861 2.099831 CGTAGGCACCTCGTCGTC 59.900 66.667 0.00 0.00 0.00 4.20
643 862 3.437795 CCGTAGGCACCTCGTCGT 61.438 66.667 0.00 0.00 46.14 4.34
655 874 7.857569 TCTTGAAAATTACAAAGTCACCGTAG 58.142 34.615 0.00 0.00 0.00 3.51
656 875 7.789273 TCTTGAAAATTACAAAGTCACCGTA 57.211 32.000 0.00 0.00 0.00 4.02
657 876 6.687081 TCTTGAAAATTACAAAGTCACCGT 57.313 33.333 0.00 0.00 0.00 4.83
658 877 7.359595 TCATCTTGAAAATTACAAAGTCACCG 58.640 34.615 0.00 0.00 0.00 4.94
663 882 9.807649 GGCATATCATCTTGAAAATTACAAAGT 57.192 29.630 0.00 0.00 0.00 2.66
664 883 8.961092 CGGCATATCATCTTGAAAATTACAAAG 58.039 33.333 0.00 0.00 0.00 2.77
665 884 8.465999 ACGGCATATCATCTTGAAAATTACAAA 58.534 29.630 0.00 0.00 0.00 2.83
666 885 7.995289 ACGGCATATCATCTTGAAAATTACAA 58.005 30.769 0.00 0.00 0.00 2.41
667 886 7.566760 ACGGCATATCATCTTGAAAATTACA 57.433 32.000 0.00 0.00 0.00 2.41
671 890 8.400947 GCATATACGGCATATCATCTTGAAAAT 58.599 33.333 0.00 0.00 0.00 1.82
672 891 7.148255 GGCATATACGGCATATCATCTTGAAAA 60.148 37.037 1.16 0.00 0.00 2.29
673 892 6.316140 GGCATATACGGCATATCATCTTGAAA 59.684 38.462 1.16 0.00 0.00 2.69
674 893 5.817296 GGCATATACGGCATATCATCTTGAA 59.183 40.000 1.16 0.00 0.00 2.69
675 894 5.359756 GGCATATACGGCATATCATCTTGA 58.640 41.667 1.16 0.00 0.00 3.02
676 895 4.209911 CGGCATATACGGCATATCATCTTG 59.790 45.833 0.00 0.00 0.00 3.02
677 896 4.099419 TCGGCATATACGGCATATCATCTT 59.901 41.667 0.00 0.00 0.00 2.40
678 897 3.636764 TCGGCATATACGGCATATCATCT 59.363 43.478 0.00 0.00 0.00 2.90
679 898 3.977427 TCGGCATATACGGCATATCATC 58.023 45.455 0.00 0.00 0.00 2.92
680 899 4.560128 GATCGGCATATACGGCATATCAT 58.440 43.478 0.00 0.00 0.00 2.45
681 900 3.550030 CGATCGGCATATACGGCATATCA 60.550 47.826 7.38 0.00 0.00 2.15
682 901 2.980476 CGATCGGCATATACGGCATATC 59.020 50.000 7.38 0.00 0.00 1.63
683 902 2.361119 ACGATCGGCATATACGGCATAT 59.639 45.455 20.98 0.00 0.00 1.78
684 903 1.746787 ACGATCGGCATATACGGCATA 59.253 47.619 20.98 0.00 0.00 3.14
685 904 0.530744 ACGATCGGCATATACGGCAT 59.469 50.000 20.98 0.00 0.00 4.40
686 905 0.388006 CACGATCGGCATATACGGCA 60.388 55.000 20.98 0.00 0.00 5.69
687 906 0.388134 ACACGATCGGCATATACGGC 60.388 55.000 20.98 0.00 0.00 5.68
688 907 1.335597 ACACACGATCGGCATATACGG 60.336 52.381 20.98 0.84 0.00 4.02
689 908 1.713932 CACACACGATCGGCATATACG 59.286 52.381 20.98 1.31 0.00 3.06
690 909 1.455786 GCACACACGATCGGCATATAC 59.544 52.381 20.98 0.00 0.00 1.47
691 910 1.339929 AGCACACACGATCGGCATATA 59.660 47.619 20.98 0.00 0.00 0.86
692 911 0.104855 AGCACACACGATCGGCATAT 59.895 50.000 20.98 0.00 0.00 1.78
693 912 0.527600 GAGCACACACGATCGGCATA 60.528 55.000 20.98 0.00 0.00 3.14
694 913 1.811266 GAGCACACACGATCGGCAT 60.811 57.895 20.98 0.61 0.00 4.40
695 914 2.432456 GAGCACACACGATCGGCA 60.432 61.111 20.98 0.00 0.00 5.69
696 915 2.432456 TGAGCACACACGATCGGC 60.432 61.111 20.98 12.55 0.00 5.54
697 916 1.073216 GACTGAGCACACACGATCGG 61.073 60.000 20.98 10.92 0.00 4.18
698 917 0.109551 AGACTGAGCACACACGATCG 60.110 55.000 14.88 14.88 0.00 3.69
699 918 2.071688 AAGACTGAGCACACACGATC 57.928 50.000 0.00 0.00 0.00 3.69
700 919 2.408050 GAAAGACTGAGCACACACGAT 58.592 47.619 0.00 0.00 0.00 3.73
701 920 1.852942 GAAAGACTGAGCACACACGA 58.147 50.000 0.00 0.00 0.00 4.35
702 921 0.504384 CGAAAGACTGAGCACACACG 59.496 55.000 0.00 0.00 0.00 4.49
703 922 0.861837 CCGAAAGACTGAGCACACAC 59.138 55.000 0.00 0.00 0.00 3.82
704 923 0.750249 TCCGAAAGACTGAGCACACA 59.250 50.000 0.00 0.00 0.00 3.72
705 924 1.423395 CTCCGAAAGACTGAGCACAC 58.577 55.000 0.00 0.00 0.00 3.82
706 925 0.318441 CCTCCGAAAGACTGAGCACA 59.682 55.000 0.00 0.00 0.00 4.57
707 926 0.318762 ACCTCCGAAAGACTGAGCAC 59.681 55.000 0.00 0.00 0.00 4.40
708 927 0.318441 CACCTCCGAAAGACTGAGCA 59.682 55.000 0.00 0.00 0.00 4.26
709 928 1.016653 GCACCTCCGAAAGACTGAGC 61.017 60.000 0.00 0.00 0.00 4.26
710 929 0.605589 AGCACCTCCGAAAGACTGAG 59.394 55.000 0.00 0.00 0.00 3.35
711 930 0.603569 GAGCACCTCCGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
712 931 0.318441 TGAGCACCTCCGAAAGACTG 59.682 55.000 0.00 0.00 0.00 3.51
713 932 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
714 933 2.482142 CCTATGAGCACCTCCGAAAGAC 60.482 54.545 0.00 0.00 0.00 3.01
715 934 1.757118 CCTATGAGCACCTCCGAAAGA 59.243 52.381 0.00 0.00 0.00 2.52
716 935 1.202580 CCCTATGAGCACCTCCGAAAG 60.203 57.143 0.00 0.00 0.00 2.62
717 936 0.830648 CCCTATGAGCACCTCCGAAA 59.169 55.000 0.00 0.00 0.00 3.46
718 937 0.032515 TCCCTATGAGCACCTCCGAA 60.033 55.000 0.00 0.00 0.00 4.30
719 938 0.188587 ATCCCTATGAGCACCTCCGA 59.811 55.000 0.00 0.00 0.00 4.55
720 939 1.821753 CTATCCCTATGAGCACCTCCG 59.178 57.143 0.00 0.00 0.00 4.63
721 940 2.564947 CACTATCCCTATGAGCACCTCC 59.435 54.545 0.00 0.00 0.00 4.30
722 941 3.006323 CACACTATCCCTATGAGCACCTC 59.994 52.174 0.00 0.00 0.00 3.85
723 942 2.968574 CACACTATCCCTATGAGCACCT 59.031 50.000 0.00 0.00 0.00 4.00
724 943 2.700897 ACACACTATCCCTATGAGCACC 59.299 50.000 0.00 0.00 0.00 5.01
725 944 3.722147 CACACACTATCCCTATGAGCAC 58.278 50.000 0.00 0.00 0.00 4.40
726 945 2.103094 GCACACACTATCCCTATGAGCA 59.897 50.000 0.00 0.00 0.00 4.26
727 946 2.760374 GCACACACTATCCCTATGAGC 58.240 52.381 0.00 0.00 0.00 4.26
728 947 2.362397 ACGCACACACTATCCCTATGAG 59.638 50.000 0.00 0.00 0.00 2.90
729 948 2.384828 ACGCACACACTATCCCTATGA 58.615 47.619 0.00 0.00 0.00 2.15
730 949 2.890808 ACGCACACACTATCCCTATG 57.109 50.000 0.00 0.00 0.00 2.23
731 950 2.764010 TGAACGCACACACTATCCCTAT 59.236 45.455 0.00 0.00 0.00 2.57
732 951 2.172679 TGAACGCACACACTATCCCTA 58.827 47.619 0.00 0.00 0.00 3.53
733 952 0.973632 TGAACGCACACACTATCCCT 59.026 50.000 0.00 0.00 0.00 4.20
734 953 2.024176 ATGAACGCACACACTATCCC 57.976 50.000 0.00 0.00 0.00 3.85
735 954 3.123804 CCTATGAACGCACACACTATCC 58.876 50.000 0.00 0.00 0.00 2.59
736 955 3.123804 CCCTATGAACGCACACACTATC 58.876 50.000 0.00 0.00 0.00 2.08
737 956 2.764010 TCCCTATGAACGCACACACTAT 59.236 45.455 0.00 0.00 0.00 2.12
738 957 2.172679 TCCCTATGAACGCACACACTA 58.827 47.619 0.00 0.00 0.00 2.74
739 958 0.973632 TCCCTATGAACGCACACACT 59.026 50.000 0.00 0.00 0.00 3.55
740 959 1.665679 CATCCCTATGAACGCACACAC 59.334 52.381 0.00 0.00 34.84 3.82
741 960 1.552792 TCATCCCTATGAACGCACACA 59.447 47.619 0.00 0.00 39.20 3.72
742 961 2.205074 CTCATCCCTATGAACGCACAC 58.795 52.381 0.00 0.00 41.57 3.82
743 962 1.831106 ACTCATCCCTATGAACGCACA 59.169 47.619 0.00 0.00 41.57 4.57
744 963 2.604046 ACTCATCCCTATGAACGCAC 57.396 50.000 0.00 0.00 41.57 5.34
745 964 5.624509 GCATATACTCATCCCTATGAACGCA 60.625 44.000 0.00 0.00 41.57 5.24
746 965 4.806247 GCATATACTCATCCCTATGAACGC 59.194 45.833 0.00 0.00 41.57 4.84
747 966 5.037385 CGCATATACTCATCCCTATGAACG 58.963 45.833 0.00 0.00 41.57 3.95
748 967 4.806247 GCGCATATACTCATCCCTATGAAC 59.194 45.833 0.30 0.00 41.57 3.18
749 968 4.440112 CGCGCATATACTCATCCCTATGAA 60.440 45.833 8.75 0.00 41.57 2.57
750 969 3.066760 CGCGCATATACTCATCCCTATGA 59.933 47.826 8.75 0.00 39.87 2.15
751 970 3.181486 ACGCGCATATACTCATCCCTATG 60.181 47.826 5.73 0.00 0.00 2.23
752 971 3.024547 ACGCGCATATACTCATCCCTAT 58.975 45.455 5.73 0.00 0.00 2.57
753 972 2.163613 CACGCGCATATACTCATCCCTA 59.836 50.000 5.73 0.00 0.00 3.53
754 973 1.067565 CACGCGCATATACTCATCCCT 60.068 52.381 5.73 0.00 0.00 4.20
755 974 1.336887 ACACGCGCATATACTCATCCC 60.337 52.381 5.73 0.00 0.00 3.85
756 975 2.065993 ACACGCGCATATACTCATCC 57.934 50.000 5.73 0.00 0.00 3.51
757 976 6.199393 TCATATACACGCGCATATACTCATC 58.801 40.000 5.73 0.00 0.00 2.92
758 977 6.131544 TCATATACACGCGCATATACTCAT 57.868 37.500 5.73 0.00 0.00 2.90
759 978 5.554822 TCATATACACGCGCATATACTCA 57.445 39.130 5.73 0.00 0.00 3.41
760 979 4.438145 GCTCATATACACGCGCATATACTC 59.562 45.833 5.73 0.00 0.00 2.59
761 980 4.352039 GCTCATATACACGCGCATATACT 58.648 43.478 5.73 0.00 0.00 2.12
762 981 3.177838 CGCTCATATACACGCGCATATAC 59.822 47.826 5.73 0.29 39.11 1.47
763 982 3.359654 CGCTCATATACACGCGCATATA 58.640 45.455 5.73 9.29 39.11 0.86
764 983 2.185262 CGCTCATATACACGCGCATAT 58.815 47.619 5.73 7.02 39.11 1.78
765 984 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
766 985 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
767 986 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
770 989 1.653679 CGCAAACGCTCATATACACGC 60.654 52.381 0.00 0.00 0.00 5.34
771 990 1.586578 ACGCAAACGCTCATATACACG 59.413 47.619 0.00 0.00 45.53 4.49
772 991 2.858344 AGACGCAAACGCTCATATACAC 59.142 45.455 0.00 0.00 45.53 2.90
773 992 2.857748 CAGACGCAAACGCTCATATACA 59.142 45.455 0.00 0.00 45.53 2.29
774 993 2.858344 ACAGACGCAAACGCTCATATAC 59.142 45.455 0.00 0.00 45.53 1.47
775 994 3.159353 ACAGACGCAAACGCTCATATA 57.841 42.857 0.00 0.00 45.53 0.86
776 995 2.010145 ACAGACGCAAACGCTCATAT 57.990 45.000 0.00 0.00 45.53 1.78
777 996 2.094906 AGTACAGACGCAAACGCTCATA 60.095 45.455 0.00 0.00 45.53 2.15
778 997 1.068474 GTACAGACGCAAACGCTCAT 58.932 50.000 0.00 0.00 45.53 2.90
779 998 0.031585 AGTACAGACGCAAACGCTCA 59.968 50.000 0.00 0.00 45.53 4.26
780 999 0.435008 CAGTACAGACGCAAACGCTC 59.565 55.000 0.00 0.00 45.53 5.03
781 1000 0.249322 ACAGTACAGACGCAAACGCT 60.249 50.000 0.00 0.00 45.53 5.07
782 1001 0.111266 CACAGTACAGACGCAAACGC 60.111 55.000 0.00 0.00 45.53 4.84
784 1003 4.782252 TTAACACAGTACAGACGCAAAC 57.218 40.909 0.00 0.00 0.00 2.93
785 1004 5.581479 TCTTTTAACACAGTACAGACGCAAA 59.419 36.000 0.00 0.00 0.00 3.68
786 1005 5.110598 TCTTTTAACACAGTACAGACGCAA 58.889 37.500 0.00 0.00 0.00 4.85
787 1006 4.684877 TCTTTTAACACAGTACAGACGCA 58.315 39.130 0.00 0.00 0.00 5.24
788 1007 5.646467 TTCTTTTAACACAGTACAGACGC 57.354 39.130 0.00 0.00 0.00 5.19
789 1008 7.958567 TGTTTTTCTTTTAACACAGTACAGACG 59.041 33.333 0.00 0.00 29.82 4.18
790 1009 9.615295 TTGTTTTTCTTTTAACACAGTACAGAC 57.385 29.630 0.00 0.00 34.25 3.51
806 1025 9.643693 CATCATGGCTACTTTATTGTTTTTCTT 57.356 29.630 0.00 0.00 0.00 2.52
807 1026 8.253113 CCATCATGGCTACTTTATTGTTTTTCT 58.747 33.333 0.00 0.00 0.00 2.52
808 1027 8.411318 CCATCATGGCTACTTTATTGTTTTTC 57.589 34.615 0.00 0.00 0.00 2.29
882 1103 8.803235 GGTATTTAAGATCCCAAAAGTTGTTCT 58.197 33.333 0.00 0.00 0.00 3.01
957 2372 1.644337 GGAGGGGAATAGGGTTTTGGT 59.356 52.381 0.00 0.00 0.00 3.67
959 2374 2.022238 GCGGAGGGGAATAGGGTTTTG 61.022 57.143 0.00 0.00 0.00 2.44
1117 2532 1.342074 CACAGTGAGAGGACTCCCAA 58.658 55.000 0.00 0.00 41.99 4.12
1188 2603 1.409802 GGTCCTCCGGAGAGTATGACA 60.410 57.143 33.39 3.03 38.58 3.58
1373 2788 2.031857 GTCGCAGTAATCTCTACCTCCG 60.032 54.545 0.00 0.00 0.00 4.63
1524 2939 3.873026 CTCCCGATGCTCGATGGCC 62.873 68.421 0.00 0.00 43.74 5.36
1586 3001 9.513906 TCCATGATGACAGAATAAAACAGTAAA 57.486 29.630 0.00 0.00 0.00 2.01
1587 3002 9.685276 ATCCATGATGACAGAATAAAACAGTAA 57.315 29.630 0.00 0.00 0.00 2.24
1589 3004 9.334947 CTATCCATGATGACAGAATAAAACAGT 57.665 33.333 0.00 0.00 0.00 3.55
1608 3033 8.898728 AGTTTAAATCCATCTCCATCTATCCAT 58.101 33.333 0.00 0.00 0.00 3.41
2246 4493 4.809426 GGTTACCTCAATAGACCATTGTCG 59.191 45.833 0.00 0.00 46.51 4.35
2771 5020 9.791820 TCATGCAAAGTGAAGTATCAATAAATG 57.208 29.630 0.00 0.00 37.30 2.32
2835 5089 9.517609 TTTCTTCGAAATCAAAACGGAAATAAA 57.482 25.926 0.00 0.00 0.00 1.40
2953 5208 2.961424 CCAGGAAATGGGTGTCACC 58.039 57.895 14.13 14.13 46.36 4.02
3380 5655 2.164219 ACTGCAACCAAAATATCGCCAG 59.836 45.455 0.00 0.00 0.00 4.85
3393 5668 6.595716 AGACTTATTATCTCACAACTGCAACC 59.404 38.462 0.00 0.00 0.00 3.77
3460 5736 2.100197 GGGAAGCCCAAGTATTGTTCC 58.900 52.381 0.00 0.00 46.99 3.62
3480 5756 1.866853 GAGCAACCAAAGGGGAAGCG 61.867 60.000 0.00 0.00 42.22 4.68
3542 5818 6.791887 ACATAGGTGAATGCTGAATTATCG 57.208 37.500 0.00 0.00 0.00 2.92
3545 5821 8.978874 ATGTAACATAGGTGAATGCTGAATTA 57.021 30.769 0.00 0.00 0.00 1.40
3596 5872 2.110578 ACTTATGGATTTTGGGCTGGC 58.889 47.619 0.00 0.00 0.00 4.85
3597 5873 4.383010 GGAAACTTATGGATTTTGGGCTGG 60.383 45.833 0.00 0.00 0.00 4.85
3615 5891 7.492352 AACTGTACATTACAACTGAGGAAAC 57.508 36.000 0.00 0.00 38.38 2.78
3645 5921 6.122277 AGCTTAGAATAACATAGCTTGGCAA 58.878 36.000 0.00 0.00 38.99 4.52
3758 6034 2.673775 TGGACAAAGGGCATCAGAAA 57.326 45.000 0.00 0.00 0.00 2.52
3813 6089 4.379498 CACATTTCTGTACACAACAATGCG 59.621 41.667 10.82 2.06 37.74 4.73
3817 6093 6.597672 AGAGAACACATTTCTGTACACAACAA 59.402 34.615 0.00 0.00 37.74 2.83
3931 6209 7.540474 TTCTACCACATAATAGAGACATCCC 57.460 40.000 0.00 0.00 0.00 3.85
4021 6300 6.751514 TGCGTTCAAAATAATACCTGACAT 57.248 33.333 0.00 0.00 0.00 3.06
4091 6370 3.008157 TCTCCAGGCAAACACGGTTAATA 59.992 43.478 0.00 0.00 0.00 0.98
4092 6371 2.159382 CTCCAGGCAAACACGGTTAAT 58.841 47.619 0.00 0.00 0.00 1.40
4114 6393 1.577328 CGCTGGTGGCTTCGATGTTT 61.577 55.000 0.00 0.00 39.13 2.83
4161 6440 1.206371 CGATTCCCGGTCCTTTAGTGT 59.794 52.381 0.00 0.00 33.91 3.55
4194 6473 4.338012 TCCACTCAAATGATGCAACATCT 58.662 39.130 10.16 0.00 0.00 2.90
4200 6479 4.338012 AGAACATCCACTCAAATGATGCA 58.662 39.130 0.00 0.00 39.55 3.96
4201 6480 4.978083 AGAACATCCACTCAAATGATGC 57.022 40.909 0.00 0.00 39.55 3.91
4258 6537 4.162040 AGGAGCCCTAAACAATGATCTG 57.838 45.455 0.00 0.00 28.47 2.90
4260 6539 5.552870 TCTAGGAGCCCTAAACAATGATC 57.447 43.478 3.03 0.00 35.49 2.92
4269 6548 4.108778 AGGAGATTCATCTAGGAGCCCTAA 59.891 45.833 3.03 0.00 35.49 2.69
4271 6550 2.454381 AGGAGATTCATCTAGGAGCCCT 59.546 50.000 0.00 0.00 37.25 5.19
4275 6554 3.305950 CGGCAAGGAGATTCATCTAGGAG 60.306 52.174 0.00 0.00 37.25 3.69
4284 6563 2.699954 TCTTTCACGGCAAGGAGATTC 58.300 47.619 0.00 0.00 0.00 2.52
4285 6564 2.859165 TCTTTCACGGCAAGGAGATT 57.141 45.000 0.00 0.00 0.00 2.40
4348 6627 8.721133 AGAAAGGCGGGGAAATATAATTTAAT 57.279 30.769 0.00 0.00 0.00 1.40
4365 6644 1.740025 CCAAAAGGCTCTAGAAAGGCG 59.260 52.381 0.00 0.00 45.92 5.52
4381 6660 3.965379 TGCTAGATACAACCGTCCAAA 57.035 42.857 0.00 0.00 0.00 3.28
4477 6756 9.561069 GTGGTATCATAATGGTTTACAAGAGAT 57.439 33.333 0.00 0.00 0.00 2.75
4479 6758 8.964476 AGTGGTATCATAATGGTTTACAAGAG 57.036 34.615 0.00 0.00 0.00 2.85
4493 6772 5.754782 AGTGCCATCAAAAGTGGTATCATA 58.245 37.500 0.00 0.00 39.01 2.15
4524 6803 6.286240 AGTGCACTGATAGTTGTCATTAGA 57.714 37.500 20.97 0.00 0.00 2.10
4537 6816 2.094494 CGTCTGTTAGGAGTGCACTGAT 60.094 50.000 27.27 14.89 0.00 2.90
4604 6883 7.727578 TCTCCACTAACATACAACTCCATTA 57.272 36.000 0.00 0.00 0.00 1.90
4648 6927 6.485171 GGGGCATTAATTATACTGTGGAGAT 58.515 40.000 0.00 0.00 0.00 2.75
4656 6935 5.745227 CCAGATCGGGGCATTAATTATACT 58.255 41.667 3.59 0.00 0.00 2.12
4670 6949 0.034089 AGGAAAAAGGCCAGATCGGG 60.034 55.000 5.01 7.64 34.06 5.14
4673 6952 8.470657 AGAAATATAAGGAAAAAGGCCAGATC 57.529 34.615 5.01 0.00 0.00 2.75
4678 6957 8.749354 TGAAAGAGAAATATAAGGAAAAAGGCC 58.251 33.333 0.00 0.00 0.00 5.19
4679 6958 9.574458 GTGAAAGAGAAATATAAGGAAAAAGGC 57.426 33.333 0.00 0.00 0.00 4.35
4714 6993 7.915293 TGTAGAGAGAAGTGTTTGTCAAAAA 57.085 32.000 0.00 0.00 0.00 1.94
4715 6994 7.606456 AGTTGTAGAGAGAAGTGTTTGTCAAAA 59.394 33.333 0.00 0.00 0.00 2.44
4716 6995 7.103641 AGTTGTAGAGAGAAGTGTTTGTCAAA 58.896 34.615 0.00 0.00 0.00 2.69
4717 6996 6.640518 AGTTGTAGAGAGAAGTGTTTGTCAA 58.359 36.000 0.00 0.00 0.00 3.18
4718 6997 6.222038 AGTTGTAGAGAGAAGTGTTTGTCA 57.778 37.500 0.00 0.00 0.00 3.58
4719 6998 6.363896 GCTAGTTGTAGAGAGAAGTGTTTGTC 59.636 42.308 0.00 0.00 0.00 3.18
4720 6999 6.217294 GCTAGTTGTAGAGAGAAGTGTTTGT 58.783 40.000 0.00 0.00 0.00 2.83
4721 7000 5.635700 GGCTAGTTGTAGAGAGAAGTGTTTG 59.364 44.000 0.00 0.00 0.00 2.93
4722 7001 5.540719 AGGCTAGTTGTAGAGAGAAGTGTTT 59.459 40.000 0.00 0.00 0.00 2.83
4723 7002 5.081032 AGGCTAGTTGTAGAGAGAAGTGTT 58.919 41.667 0.00 0.00 0.00 3.32
4724 7003 4.668636 AGGCTAGTTGTAGAGAGAAGTGT 58.331 43.478 0.00 0.00 0.00 3.55
4753 7032 6.175471 TGTTTTAGAGATCACATGTGCATCT 58.825 36.000 26.88 26.88 33.42 2.90
4775 7054 3.671008 AGTGATGTTGCATGCAATTGT 57.329 38.095 33.94 22.49 38.28 2.71
4779 7058 8.494347 GTTATTTTTAAGTGATGTTGCATGCAA 58.506 29.630 28.80 28.80 0.00 4.08
4802 7081 6.491745 TCCAATGCATTGTCTTTTAGGTGTTA 59.508 34.615 31.87 1.73 36.06 2.41
4859 7141 2.126346 GCACGGCATTGGAGTTGC 60.126 61.111 0.00 0.00 39.41 4.17
4871 7153 4.034626 TGGTATGTTCGATTTAATGCACGG 59.965 41.667 0.00 0.00 0.00 4.94
4872 7154 5.150342 TGGTATGTTCGATTTAATGCACG 57.850 39.130 0.00 0.00 0.00 5.34
4890 7172 2.104111 CCCTATCCGCAGATGTTTGGTA 59.896 50.000 0.00 0.00 33.67 3.25
4899 7181 2.912542 CGCCTCCCTATCCGCAGA 60.913 66.667 0.00 0.00 0.00 4.26
4900 7182 3.996124 CCGCCTCCCTATCCGCAG 61.996 72.222 0.00 0.00 0.00 5.18
4915 7197 0.173255 GGTTGGATGTTTGATGCCCG 59.827 55.000 0.00 0.00 0.00 6.13
4921 7203 5.048364 CGTCTAAAATGGGTTGGATGTTTGA 60.048 40.000 0.00 0.00 0.00 2.69
4927 7209 3.617284 GTCCGTCTAAAATGGGTTGGAT 58.383 45.455 0.00 0.00 34.45 3.41
4931 7213 1.624813 TCCGTCCGTCTAAAATGGGTT 59.375 47.619 0.00 0.00 34.45 4.11
4940 7222 2.837498 TGAATATCGTCCGTCCGTCTA 58.163 47.619 0.00 0.00 0.00 2.59
4942 7224 2.316792 CATGAATATCGTCCGTCCGTC 58.683 52.381 0.00 0.00 0.00 4.79
4948 7230 2.342651 CGCTTAGCATGAATATCGTCCG 59.657 50.000 4.70 0.00 0.00 4.79
4952 7234 4.176271 TCATCCGCTTAGCATGAATATCG 58.824 43.478 4.70 0.00 0.00 2.92
4990 7272 9.793252 TTTCGTCCTTGTAGTTGTAAGTATATC 57.207 33.333 0.00 0.00 0.00 1.63
4993 7275 9.148104 GAATTTCGTCCTTGTAGTTGTAAGTAT 57.852 33.333 0.00 0.00 0.00 2.12
4994 7276 8.143193 TGAATTTCGTCCTTGTAGTTGTAAGTA 58.857 33.333 0.00 0.00 0.00 2.24
4995 7277 6.987992 TGAATTTCGTCCTTGTAGTTGTAAGT 59.012 34.615 0.00 0.00 0.00 2.24
4996 7278 7.416154 TGAATTTCGTCCTTGTAGTTGTAAG 57.584 36.000 0.00 0.00 0.00 2.34
4997 7279 7.280428 TGTTGAATTTCGTCCTTGTAGTTGTAA 59.720 33.333 0.00 0.00 0.00 2.41
4998 7280 6.762187 TGTTGAATTTCGTCCTTGTAGTTGTA 59.238 34.615 0.00 0.00 0.00 2.41
4999 7281 5.587043 TGTTGAATTTCGTCCTTGTAGTTGT 59.413 36.000 0.00 0.00 0.00 3.32
5000 7282 6.055231 TGTTGAATTTCGTCCTTGTAGTTG 57.945 37.500 0.00 0.00 0.00 3.16
5001 7283 6.687081 TTGTTGAATTTCGTCCTTGTAGTT 57.313 33.333 0.00 0.00 0.00 2.24
5002 7284 6.687081 TTTGTTGAATTTCGTCCTTGTAGT 57.313 33.333 0.00 0.00 0.00 2.73
5003 7285 6.519761 CGATTTGTTGAATTTCGTCCTTGTAG 59.480 38.462 0.00 0.00 0.00 2.74
5004 7286 6.367421 CGATTTGTTGAATTTCGTCCTTGTA 58.633 36.000 0.00 0.00 0.00 2.41
5005 7287 5.212194 CGATTTGTTGAATTTCGTCCTTGT 58.788 37.500 0.00 0.00 0.00 3.16
5006 7288 4.616802 CCGATTTGTTGAATTTCGTCCTTG 59.383 41.667 0.00 0.00 0.00 3.61
5007 7289 4.277423 ACCGATTTGTTGAATTTCGTCCTT 59.723 37.500 0.00 0.00 0.00 3.36
5008 7290 3.818773 ACCGATTTGTTGAATTTCGTCCT 59.181 39.130 0.00 0.00 0.00 3.85
5009 7291 3.911964 CACCGATTTGTTGAATTTCGTCC 59.088 43.478 0.00 0.00 0.00 4.79
5010 7292 3.911964 CCACCGATTTGTTGAATTTCGTC 59.088 43.478 0.00 0.00 0.00 4.20
5011 7293 3.566322 TCCACCGATTTGTTGAATTTCGT 59.434 39.130 0.00 0.00 0.00 3.85
5012 7294 3.911964 GTCCACCGATTTGTTGAATTTCG 59.088 43.478 0.00 0.00 0.00 3.46
5016 7298 2.167662 GGGTCCACCGATTTGTTGAAT 58.832 47.619 0.00 0.00 36.71 2.57
5025 7307 0.106369 TCTACGATGGGTCCACCGAT 60.106 55.000 11.17 0.00 44.64 4.18
5026 7308 0.750546 CTCTACGATGGGTCCACCGA 60.751 60.000 11.17 0.00 44.64 4.69
5031 7313 0.755698 TCAGCCTCTACGATGGGTCC 60.756 60.000 0.00 0.00 30.91 4.46
5047 7329 1.928868 AAAACTCTGGGGCCAATCAG 58.071 50.000 4.39 9.42 0.00 2.90
5057 7339 4.697352 CCCAGACTACATCAAAAACTCTGG 59.303 45.833 0.00 0.00 42.02 3.86
5059 7341 5.568620 ACCCAGACTACATCAAAAACTCT 57.431 39.130 0.00 0.00 0.00 3.24
5064 7346 5.763204 GTGAAGAACCCAGACTACATCAAAA 59.237 40.000 0.00 0.00 0.00 2.44
5067 7349 4.160329 AGTGAAGAACCCAGACTACATCA 58.840 43.478 0.00 0.00 0.00 3.07
5068 7350 4.810191 AGTGAAGAACCCAGACTACATC 57.190 45.455 0.00 0.00 0.00 3.06
5069 7351 5.071788 TGAAAGTGAAGAACCCAGACTACAT 59.928 40.000 0.00 0.00 0.00 2.29
5070 7352 4.407621 TGAAAGTGAAGAACCCAGACTACA 59.592 41.667 0.00 0.00 0.00 2.74
5071 7353 4.957296 TGAAAGTGAAGAACCCAGACTAC 58.043 43.478 0.00 0.00 0.00 2.73
5072 7354 4.040461 CCTGAAAGTGAAGAACCCAGACTA 59.960 45.833 0.00 0.00 0.00 2.59
5079 7361 4.218635 GGGAAATCCTGAAAGTGAAGAACC 59.781 45.833 0.00 0.00 35.95 3.62
5089 7371 6.101005 ACCTTTTCAAATGGGAAATCCTGAAA 59.899 34.615 6.98 9.35 36.71 2.69
5123 7405 5.482163 TGTTGATGACAAGATCACCACTA 57.518 39.130 0.00 0.00 41.24 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.