Multiple sequence alignment - TraesCS1D01G253800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G253800 chr1D 100.000 3538 0 0 1333 4870 345712566 345716103 0.000000e+00 6534.0
1 TraesCS1D01G253800 chr1D 100.000 1050 0 0 1 1050 345711234 345712283 0.000000e+00 1940.0
2 TraesCS1D01G253800 chr1D 85.530 698 85 12 4188 4870 345721410 345722106 0.000000e+00 715.0
3 TraesCS1D01G253800 chr1D 87.582 153 18 1 263 414 55658008 55657856 5.010000e-40 176.0
4 TraesCS1D01G253800 chr1A 94.722 2406 84 17 1686 4069 445915357 445917741 0.000000e+00 3699.0
5 TraesCS1D01G253800 chr1A 95.060 749 34 2 4123 4870 445917749 445918495 0.000000e+00 1175.0
6 TraesCS1D01G253800 chr1A 83.498 709 90 12 4188 4870 445934606 445935313 1.910000e-178 636.0
7 TraesCS1D01G253800 chr1A 97.531 324 8 0 1337 1660 445915039 445915362 5.510000e-154 555.0
8 TraesCS1D01G253800 chr1A 88.517 418 17 21 638 1050 445914615 445915006 1.230000e-130 477.0
9 TraesCS1D01G253800 chr1A 90.909 88 8 0 194 281 445886514 445886601 8.560000e-23 119.0
10 TraesCS1D01G253800 chr1A 90.000 80 7 1 484 563 445886698 445886776 8.620000e-18 102.0
11 TraesCS1D01G253800 chr1B 95.030 1831 67 10 1825 3653 464483554 464481746 0.000000e+00 2856.0
12 TraesCS1D01G253800 chr1B 95.037 1229 48 5 3650 4870 464481624 464480401 0.000000e+00 1919.0
13 TraesCS1D01G253800 chr1B 86.040 702 79 8 4188 4870 464151120 464150419 0.000000e+00 736.0
14 TraesCS1D01G253800 chr1B 96.970 330 10 0 1333 1662 464484013 464483684 5.510000e-154 555.0
15 TraesCS1D01G253800 chr1B 87.638 453 12 18 612 1050 464484496 464484074 2.040000e-133 486.0
16 TraesCS1D01G253800 chr1B 81.651 109 16 3 435 540 464512113 464512006 2.410000e-13 87.9
17 TraesCS1D01G253800 chr6B 89.209 278 30 0 1347 1624 223657721 223657444 1.000000e-91 348.0
18 TraesCS1D01G253800 chr6A 96.639 119 4 0 291 409 14308839 14308721 1.070000e-46 198.0
19 TraesCS1D01G253800 chr6A 96.639 119 4 0 291 409 14310695 14310577 1.070000e-46 198.0
20 TraesCS1D01G253800 chr7A 92.481 133 8 2 277 408 15493955 15493824 6.430000e-44 189.0
21 TraesCS1D01G253800 chr5D 92.366 131 10 0 280 410 387621313 387621443 2.310000e-43 187.0
22 TraesCS1D01G253800 chr5D 91.729 133 11 0 275 407 241844073 241844205 8.320000e-43 185.0
23 TraesCS1D01G253800 chr5D 91.176 136 12 0 278 413 544234683 544234818 8.320000e-43 185.0
24 TraesCS1D01G253800 chr2D 91.176 136 12 0 277 412 27264980 27265115 8.320000e-43 185.0
25 TraesCS1D01G253800 chr7B 88.235 153 16 2 280 432 470313153 470313003 1.080000e-41 182.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G253800 chr1D 345711234 345716103 4869 False 4237.0 6534 100.00000 1 4870 2 chr1D.!!$F2 4869
1 TraesCS1D01G253800 chr1D 345721410 345722106 696 False 715.0 715 85.53000 4188 4870 1 chr1D.!!$F1 682
2 TraesCS1D01G253800 chr1A 445914615 445918495 3880 False 1476.5 3699 93.95750 638 4870 4 chr1A.!!$F3 4232
3 TraesCS1D01G253800 chr1A 445934606 445935313 707 False 636.0 636 83.49800 4188 4870 1 chr1A.!!$F1 682
4 TraesCS1D01G253800 chr1B 464480401 464484496 4095 True 1454.0 2856 93.66875 612 4870 4 chr1B.!!$R3 4258
5 TraesCS1D01G253800 chr1B 464150419 464151120 701 True 736.0 736 86.04000 4188 4870 1 chr1B.!!$R1 682

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
137 138 0.105593 CAGTGTATCCGCTGGCTGAT 59.894 55.000 5.01 5.01 43.92 2.90 F
777 784 0.249741 AACGCGGCGAGCCTTATTAT 60.250 50.000 30.94 0.00 44.76 1.28 F
1763 1790 0.108233 CAGGCTCACTTCTCAGGCTC 60.108 60.000 0.00 0.00 43.40 4.70 F
1765 1792 0.175531 GGCTCACTTCTCAGGCTCTC 59.824 60.000 0.00 0.00 32.47 3.20 F
1766 1793 0.894141 GCTCACTTCTCAGGCTCTCA 59.106 55.000 0.00 0.00 0.00 3.27 F
1767 1794 1.135024 GCTCACTTCTCAGGCTCTCAG 60.135 57.143 0.00 0.00 0.00 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1762 1789 0.318441 CAAGAAGTCACCGGCTGAGA 59.682 55.000 0.00 0.00 0.00 3.27 R
2220 2272 0.026803 GCACGCAATCTTTAGGCTCG 59.973 55.000 0.00 0.00 0.00 5.03 R
3406 3461 1.318576 AAAAGCGGAGACCCAACAAG 58.681 50.000 0.00 0.00 0.00 3.16 R
3473 3528 5.335740 CCCGTACTAGTAGTGAATAGCCATG 60.336 48.000 13.29 0.00 0.00 3.66 R
3794 3974 8.654230 TTCAGATTGTAGAACTCTAATGATGC 57.346 34.615 0.00 0.00 0.00 3.91 R
3953 4133 5.186996 ACTTTACATTGACTGCAACAAGG 57.813 39.130 13.66 13.66 36.72 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.522569 ATGGTGGTCGGAGCTAAGC 59.477 57.895 8.82 0.00 0.00 3.09
19 20 0.978146 ATGGTGGTCGGAGCTAAGCT 60.978 55.000 8.82 0.00 43.88 3.74
20 21 1.192146 TGGTGGTCGGAGCTAAGCTT 61.192 55.000 3.48 3.48 39.88 3.74
21 22 0.741221 GGTGGTCGGAGCTAAGCTTG 60.741 60.000 9.86 0.01 39.88 4.01
22 23 0.741221 GTGGTCGGAGCTAAGCTTGG 60.741 60.000 9.86 7.48 39.88 3.61
23 24 1.153349 GGTCGGAGCTAAGCTTGGG 60.153 63.158 9.86 2.93 39.88 4.12
24 25 1.815840 GTCGGAGCTAAGCTTGGGC 60.816 63.158 9.86 13.31 39.88 5.36
65 66 4.976925 CTGCGAGCGGGCATAGGG 62.977 72.222 5.19 0.00 42.99 3.53
67 68 4.671569 GCGAGCGGGCATAGGGAG 62.672 72.222 0.00 0.00 0.00 4.30
68 69 3.996124 CGAGCGGGCATAGGGAGG 61.996 72.222 0.00 0.00 0.00 4.30
69 70 4.321966 GAGCGGGCATAGGGAGGC 62.322 72.222 0.00 0.00 0.00 4.70
71 72 4.632974 GCGGGCATAGGGAGGCAG 62.633 72.222 0.00 0.00 32.69 4.85
72 73 2.844362 CGGGCATAGGGAGGCAGA 60.844 66.667 0.00 0.00 32.69 4.26
73 74 2.876945 CGGGCATAGGGAGGCAGAG 61.877 68.421 0.00 0.00 32.69 3.35
74 75 1.460305 GGGCATAGGGAGGCAGAGA 60.460 63.158 0.00 0.00 32.69 3.10
75 76 1.479368 GGGCATAGGGAGGCAGAGAG 61.479 65.000 0.00 0.00 32.69 3.20
76 77 0.762461 GGCATAGGGAGGCAGAGAGT 60.762 60.000 0.00 0.00 32.69 3.24
77 78 1.481428 GGCATAGGGAGGCAGAGAGTA 60.481 57.143 0.00 0.00 32.69 2.59
78 79 1.616374 GCATAGGGAGGCAGAGAGTAC 59.384 57.143 0.00 0.00 30.94 2.73
79 80 2.950781 CATAGGGAGGCAGAGAGTACA 58.049 52.381 0.00 0.00 0.00 2.90
80 81 3.505386 CATAGGGAGGCAGAGAGTACAT 58.495 50.000 0.00 0.00 0.00 2.29
81 82 4.667573 CATAGGGAGGCAGAGAGTACATA 58.332 47.826 0.00 0.00 0.00 2.29
82 83 3.689872 AGGGAGGCAGAGAGTACATAA 57.310 47.619 0.00 0.00 0.00 1.90
83 84 3.571590 AGGGAGGCAGAGAGTACATAAG 58.428 50.000 0.00 0.00 0.00 1.73
84 85 3.205507 AGGGAGGCAGAGAGTACATAAGA 59.794 47.826 0.00 0.00 0.00 2.10
85 86 3.961408 GGGAGGCAGAGAGTACATAAGAA 59.039 47.826 0.00 0.00 0.00 2.52
86 87 4.406003 GGGAGGCAGAGAGTACATAAGAAA 59.594 45.833 0.00 0.00 0.00 2.52
87 88 5.104900 GGGAGGCAGAGAGTACATAAGAAAA 60.105 44.000 0.00 0.00 0.00 2.29
88 89 6.045955 GGAGGCAGAGAGTACATAAGAAAAG 58.954 44.000 0.00 0.00 0.00 2.27
89 90 5.983540 AGGCAGAGAGTACATAAGAAAAGG 58.016 41.667 0.00 0.00 0.00 3.11
90 91 5.721960 AGGCAGAGAGTACATAAGAAAAGGA 59.278 40.000 0.00 0.00 0.00 3.36
91 92 6.385467 AGGCAGAGAGTACATAAGAAAAGGAT 59.615 38.462 0.00 0.00 0.00 3.24
92 93 7.565398 AGGCAGAGAGTACATAAGAAAAGGATA 59.435 37.037 0.00 0.00 0.00 2.59
93 94 8.204836 GGCAGAGAGTACATAAGAAAAGGATAA 58.795 37.037 0.00 0.00 0.00 1.75
94 95 9.771534 GCAGAGAGTACATAAGAAAAGGATAAT 57.228 33.333 0.00 0.00 0.00 1.28
103 104 9.490379 ACATAAGAAAAGGATAATGATACGTCC 57.510 33.333 0.00 0.00 0.00 4.79
104 105 8.648097 CATAAGAAAAGGATAATGATACGTCCG 58.352 37.037 0.00 0.00 35.89 4.79
105 106 6.401047 AGAAAAGGATAATGATACGTCCGA 57.599 37.500 0.00 0.00 35.89 4.55
106 107 6.812998 AGAAAAGGATAATGATACGTCCGAA 58.187 36.000 0.00 0.00 35.89 4.30
107 108 6.924060 AGAAAAGGATAATGATACGTCCGAAG 59.076 38.462 0.00 0.00 35.89 3.79
124 125 4.830765 GGCGGCCGATGCAGTGTA 62.831 66.667 33.48 0.00 40.13 2.90
125 126 2.588877 GCGGCCGATGCAGTGTAT 60.589 61.111 33.48 0.00 40.13 2.29
126 127 2.598632 GCGGCCGATGCAGTGTATC 61.599 63.158 33.48 10.90 40.13 2.24
127 128 1.956170 CGGCCGATGCAGTGTATCC 60.956 63.158 24.07 1.93 40.13 2.59
128 129 1.956170 GGCCGATGCAGTGTATCCG 60.956 63.158 14.67 9.88 40.13 4.18
129 130 2.598632 GCCGATGCAGTGTATCCGC 61.599 63.158 16.01 16.01 37.47 5.54
130 131 1.068083 CCGATGCAGTGTATCCGCT 59.932 57.895 14.67 0.00 0.00 5.52
132 133 1.217585 CGATGCAGTGTATCCGCTGG 61.218 60.000 14.67 0.00 46.96 4.85
133 134 1.502163 GATGCAGTGTATCCGCTGGC 61.502 60.000 9.88 0.00 46.96 4.85
134 135 1.976132 ATGCAGTGTATCCGCTGGCT 61.976 55.000 0.72 0.00 46.96 4.75
135 136 2.176273 GCAGTGTATCCGCTGGCTG 61.176 63.158 0.72 0.00 46.96 4.85
136 137 1.517361 CAGTGTATCCGCTGGCTGA 59.483 57.895 0.00 0.00 43.92 4.26
137 138 0.105593 CAGTGTATCCGCTGGCTGAT 59.894 55.000 5.01 5.01 43.92 2.90
138 139 0.833287 AGTGTATCCGCTGGCTGATT 59.167 50.000 4.96 0.00 0.00 2.57
139 140 0.940126 GTGTATCCGCTGGCTGATTG 59.060 55.000 4.96 0.00 0.00 2.67
140 141 0.829990 TGTATCCGCTGGCTGATTGA 59.170 50.000 4.96 0.00 0.00 2.57
141 142 1.209261 TGTATCCGCTGGCTGATTGAA 59.791 47.619 4.96 0.00 0.00 2.69
142 143 1.869767 GTATCCGCTGGCTGATTGAAG 59.130 52.381 4.96 0.00 0.00 3.02
143 144 0.543277 ATCCGCTGGCTGATTGAAGA 59.457 50.000 0.00 0.00 0.00 2.87
144 145 0.324614 TCCGCTGGCTGATTGAAGAA 59.675 50.000 0.00 0.00 0.00 2.52
145 146 1.167851 CCGCTGGCTGATTGAAGAAA 58.832 50.000 0.00 0.00 0.00 2.52
146 147 1.131883 CCGCTGGCTGATTGAAGAAAG 59.868 52.381 0.00 0.00 0.00 2.62
147 148 2.079158 CGCTGGCTGATTGAAGAAAGA 58.921 47.619 0.00 0.00 0.00 2.52
148 149 2.095532 CGCTGGCTGATTGAAGAAAGAG 59.904 50.000 0.00 0.00 0.00 2.85
149 150 3.341823 GCTGGCTGATTGAAGAAAGAGA 58.658 45.455 0.00 0.00 0.00 3.10
150 151 3.755378 GCTGGCTGATTGAAGAAAGAGAA 59.245 43.478 0.00 0.00 0.00 2.87
151 152 4.379290 GCTGGCTGATTGAAGAAAGAGAAC 60.379 45.833 0.00 0.00 0.00 3.01
152 153 4.074970 TGGCTGATTGAAGAAAGAGAACC 58.925 43.478 0.00 0.00 0.00 3.62
153 154 4.202503 TGGCTGATTGAAGAAAGAGAACCT 60.203 41.667 0.00 0.00 0.00 3.50
154 155 4.394610 GGCTGATTGAAGAAAGAGAACCTC 59.605 45.833 0.00 0.00 0.00 3.85
155 156 5.244755 GCTGATTGAAGAAAGAGAACCTCT 58.755 41.667 0.00 0.00 43.37 3.69
165 166 1.627834 AGAGAACCTCTTGAAGCTGGG 59.372 52.381 8.46 3.83 37.60 4.45
166 167 1.349357 GAGAACCTCTTGAAGCTGGGT 59.651 52.381 8.46 2.33 0.00 4.51
167 168 1.777272 AGAACCTCTTGAAGCTGGGTT 59.223 47.619 13.67 13.67 42.12 4.11
168 169 2.175715 AGAACCTCTTGAAGCTGGGTTT 59.824 45.455 14.50 0.58 39.92 3.27
169 170 2.755952 ACCTCTTGAAGCTGGGTTTT 57.244 45.000 8.46 0.00 0.00 2.43
170 171 3.032265 ACCTCTTGAAGCTGGGTTTTT 57.968 42.857 8.46 0.00 0.00 1.94
207 208 3.001514 GGCTACTCCCCTAACACCA 57.998 57.895 0.00 0.00 0.00 4.17
208 209 1.282382 GGCTACTCCCCTAACACCAA 58.718 55.000 0.00 0.00 0.00 3.67
209 210 1.631898 GGCTACTCCCCTAACACCAAA 59.368 52.381 0.00 0.00 0.00 3.28
210 211 2.040679 GGCTACTCCCCTAACACCAAAA 59.959 50.000 0.00 0.00 0.00 2.44
211 212 3.499021 GGCTACTCCCCTAACACCAAAAA 60.499 47.826 0.00 0.00 0.00 1.94
212 213 3.504906 GCTACTCCCCTAACACCAAAAAC 59.495 47.826 0.00 0.00 0.00 2.43
213 214 3.965470 ACTCCCCTAACACCAAAAACT 57.035 42.857 0.00 0.00 0.00 2.66
214 215 4.259933 ACTCCCCTAACACCAAAAACTT 57.740 40.909 0.00 0.00 0.00 2.66
215 216 5.391577 ACTCCCCTAACACCAAAAACTTA 57.608 39.130 0.00 0.00 0.00 2.24
216 217 5.960704 ACTCCCCTAACACCAAAAACTTAT 58.039 37.500 0.00 0.00 0.00 1.73
217 218 6.378745 ACTCCCCTAACACCAAAAACTTATT 58.621 36.000 0.00 0.00 0.00 1.40
218 219 6.266786 ACTCCCCTAACACCAAAAACTTATTG 59.733 38.462 0.00 0.00 0.00 1.90
219 220 6.374588 TCCCCTAACACCAAAAACTTATTGA 58.625 36.000 0.00 0.00 0.00 2.57
220 221 6.839657 TCCCCTAACACCAAAAACTTATTGAA 59.160 34.615 0.00 0.00 0.00 2.69
221 222 7.014808 TCCCCTAACACCAAAAACTTATTGAAG 59.985 37.037 0.00 0.00 38.76 3.02
222 223 7.014808 CCCCTAACACCAAAAACTTATTGAAGA 59.985 37.037 0.00 0.00 36.45 2.87
223 224 8.417884 CCCTAACACCAAAAACTTATTGAAGAA 58.582 33.333 0.00 0.00 36.45 2.52
224 225 9.810545 CCTAACACCAAAAACTTATTGAAGAAA 57.189 29.630 0.00 0.00 36.45 2.52
227 228 9.883142 AACACCAAAAACTTATTGAAGAAATGA 57.117 25.926 0.00 0.00 36.45 2.57
228 229 9.533253 ACACCAAAAACTTATTGAAGAAATGAG 57.467 29.630 0.00 0.00 37.77 2.90
229 230 9.748708 CACCAAAAACTTATTGAAGAAATGAGA 57.251 29.630 0.00 0.00 35.83 3.27
230 231 9.971922 ACCAAAAACTTATTGAAGAAATGAGAG 57.028 29.630 0.00 0.00 35.83 3.20
231 232 8.919661 CCAAAAACTTATTGAAGAAATGAGAGC 58.080 33.333 0.00 0.00 35.83 4.09
232 233 9.688592 CAAAAACTTATTGAAGAAATGAGAGCT 57.311 29.630 0.00 0.00 35.83 4.09
233 234 9.688592 AAAAACTTATTGAAGAAATGAGAGCTG 57.311 29.630 0.00 0.00 35.83 4.24
234 235 7.992754 AACTTATTGAAGAAATGAGAGCTGT 57.007 32.000 0.00 0.00 35.83 4.40
235 236 7.992754 ACTTATTGAAGAAATGAGAGCTGTT 57.007 32.000 0.00 0.00 35.83 3.16
236 237 7.814642 ACTTATTGAAGAAATGAGAGCTGTTG 58.185 34.615 0.00 0.00 35.83 3.33
237 238 5.640189 ATTGAAGAAATGAGAGCTGTTGG 57.360 39.130 0.00 0.00 0.00 3.77
238 239 4.356405 TGAAGAAATGAGAGCTGTTGGA 57.644 40.909 0.00 0.00 0.00 3.53
239 240 4.321718 TGAAGAAATGAGAGCTGTTGGAG 58.678 43.478 0.00 0.00 0.00 3.86
240 241 4.040829 TGAAGAAATGAGAGCTGTTGGAGA 59.959 41.667 0.00 0.00 0.00 3.71
241 242 4.840716 AGAAATGAGAGCTGTTGGAGAT 57.159 40.909 0.00 0.00 0.00 2.75
242 243 4.515361 AGAAATGAGAGCTGTTGGAGATG 58.485 43.478 0.00 0.00 0.00 2.90
243 244 2.328819 ATGAGAGCTGTTGGAGATGC 57.671 50.000 0.00 0.00 0.00 3.91
244 245 1.273759 TGAGAGCTGTTGGAGATGCT 58.726 50.000 0.00 0.00 38.59 3.79
248 249 2.820330 GAGCTGTTGGAGATGCTCTAC 58.180 52.381 0.00 0.00 45.78 2.59
249 250 2.167281 GAGCTGTTGGAGATGCTCTACA 59.833 50.000 0.00 0.00 45.78 2.74
250 251 2.568956 AGCTGTTGGAGATGCTCTACAA 59.431 45.455 6.71 6.71 44.60 2.41
255 256 3.827008 TGGAGATGCTCTACAATGGAC 57.173 47.619 0.00 0.00 33.61 4.02
256 257 3.106827 TGGAGATGCTCTACAATGGACA 58.893 45.455 0.00 0.00 33.61 4.02
257 258 3.519107 TGGAGATGCTCTACAATGGACAA 59.481 43.478 0.00 0.00 33.61 3.18
258 259 3.873952 GGAGATGCTCTACAATGGACAAC 59.126 47.826 0.00 0.00 0.00 3.32
259 260 3.873952 GAGATGCTCTACAATGGACAACC 59.126 47.826 0.00 0.00 0.00 3.77
260 261 2.489938 TGCTCTACAATGGACAACCC 57.510 50.000 0.00 0.00 34.81 4.11
261 262 1.985159 TGCTCTACAATGGACAACCCT 59.015 47.619 0.00 0.00 35.38 4.34
262 263 3.178046 TGCTCTACAATGGACAACCCTA 58.822 45.455 0.00 0.00 35.38 3.53
263 264 3.585289 TGCTCTACAATGGACAACCCTAA 59.415 43.478 0.00 0.00 35.38 2.69
264 265 4.227300 TGCTCTACAATGGACAACCCTAAT 59.773 41.667 0.00 0.00 35.38 1.73
265 266 5.193679 GCTCTACAATGGACAACCCTAATT 58.806 41.667 0.00 0.00 35.38 1.40
266 267 6.069905 TGCTCTACAATGGACAACCCTAATTA 60.070 38.462 0.00 0.00 35.38 1.40
267 268 6.998673 GCTCTACAATGGACAACCCTAATTAT 59.001 38.462 0.00 0.00 35.38 1.28
268 269 7.502561 GCTCTACAATGGACAACCCTAATTATT 59.497 37.037 0.00 0.00 35.38 1.40
269 270 9.408648 CTCTACAATGGACAACCCTAATTATTT 57.591 33.333 0.00 0.00 35.38 1.40
270 271 9.184523 TCTACAATGGACAACCCTAATTATTTG 57.815 33.333 0.00 0.00 35.38 2.32
271 272 9.184523 CTACAATGGACAACCCTAATTATTTGA 57.815 33.333 8.04 0.00 35.38 2.69
272 273 8.429237 ACAATGGACAACCCTAATTATTTGAA 57.571 30.769 8.04 0.00 35.38 2.69
273 274 8.311109 ACAATGGACAACCCTAATTATTTGAAC 58.689 33.333 8.04 3.02 35.38 3.18
274 275 8.310382 CAATGGACAACCCTAATTATTTGAACA 58.690 33.333 8.04 6.87 35.38 3.18
275 276 7.841282 TGGACAACCCTAATTATTTGAACAA 57.159 32.000 8.04 0.00 35.38 2.83
276 277 8.429237 TGGACAACCCTAATTATTTGAACAAT 57.571 30.769 8.04 0.00 35.38 2.71
277 278 8.875168 TGGACAACCCTAATTATTTGAACAATT 58.125 29.630 8.04 0.00 35.38 2.32
289 290 8.815565 TTATTTGAACAATTATACTCCCTGCA 57.184 30.769 0.00 0.00 0.00 4.41
290 291 7.902920 ATTTGAACAATTATACTCCCTGCAT 57.097 32.000 0.00 0.00 0.00 3.96
291 292 6.942532 TTGAACAATTATACTCCCTGCATC 57.057 37.500 0.00 0.00 0.00 3.91
292 293 5.376625 TGAACAATTATACTCCCTGCATCC 58.623 41.667 0.00 0.00 0.00 3.51
293 294 4.373156 ACAATTATACTCCCTGCATCCC 57.627 45.455 0.00 0.00 0.00 3.85
294 295 3.721575 ACAATTATACTCCCTGCATCCCA 59.278 43.478 0.00 0.00 0.00 4.37
295 296 4.167892 ACAATTATACTCCCTGCATCCCAA 59.832 41.667 0.00 0.00 0.00 4.12
296 297 5.139727 CAATTATACTCCCTGCATCCCAAA 58.860 41.667 0.00 0.00 0.00 3.28
297 298 4.871871 TTATACTCCCTGCATCCCAAAA 57.128 40.909 0.00 0.00 0.00 2.44
298 299 3.979501 ATACTCCCTGCATCCCAAAAT 57.020 42.857 0.00 0.00 0.00 1.82
299 300 2.629017 ACTCCCTGCATCCCAAAATT 57.371 45.000 0.00 0.00 0.00 1.82
300 301 2.460669 ACTCCCTGCATCCCAAAATTC 58.539 47.619 0.00 0.00 0.00 2.17
301 302 2.043526 ACTCCCTGCATCCCAAAATTCT 59.956 45.455 0.00 0.00 0.00 2.40
302 303 3.102204 CTCCCTGCATCCCAAAATTCTT 58.898 45.455 0.00 0.00 0.00 2.52
303 304 2.833338 TCCCTGCATCCCAAAATTCTTG 59.167 45.455 0.00 0.00 0.00 3.02
304 305 2.568509 CCCTGCATCCCAAAATTCTTGT 59.431 45.455 0.00 0.00 0.00 3.16
305 306 3.368739 CCCTGCATCCCAAAATTCTTGTC 60.369 47.826 0.00 0.00 0.00 3.18
306 307 3.512724 CCTGCATCCCAAAATTCTTGTCT 59.487 43.478 0.00 0.00 0.00 3.41
307 308 4.020839 CCTGCATCCCAAAATTCTTGTCTT 60.021 41.667 0.00 0.00 0.00 3.01
308 309 5.185635 CCTGCATCCCAAAATTCTTGTCTTA 59.814 40.000 0.00 0.00 0.00 2.10
309 310 6.295236 CCTGCATCCCAAAATTCTTGTCTTAA 60.295 38.462 0.00 0.00 0.00 1.85
310 311 7.060383 TGCATCCCAAAATTCTTGTCTTAAA 57.940 32.000 0.00 0.00 0.00 1.52
311 312 7.678837 TGCATCCCAAAATTCTTGTCTTAAAT 58.321 30.769 0.00 0.00 0.00 1.40
312 313 8.156165 TGCATCCCAAAATTCTTGTCTTAAATT 58.844 29.630 0.00 0.00 0.00 1.82
313 314 9.002600 GCATCCCAAAATTCTTGTCTTAAATTT 57.997 29.630 0.00 0.00 34.86 1.82
316 317 9.541143 TCCCAAAATTCTTGTCTTAAATTTGTC 57.459 29.630 0.00 0.00 33.95 3.18
317 318 9.546428 CCCAAAATTCTTGTCTTAAATTTGTCT 57.454 29.630 0.00 0.00 33.95 3.41
360 361 9.601217 AGTCATGTTTTAGTGTTAGATACATCC 57.399 33.333 0.00 0.00 39.39 3.51
361 362 8.540492 GTCATGTTTTAGTGTTAGATACATCCG 58.460 37.037 0.00 0.00 39.39 4.18
362 363 8.255206 TCATGTTTTAGTGTTAGATACATCCGT 58.745 33.333 0.00 0.00 39.39 4.69
363 364 9.524106 CATGTTTTAGTGTTAGATACATCCGTA 57.476 33.333 0.00 0.00 39.39 4.02
380 381 8.234136 ACATCCGTATCTAGACAAATGTTAGA 57.766 34.615 0.00 7.45 0.00 2.10
381 382 8.136165 ACATCCGTATCTAGACAAATGTTAGAC 58.864 37.037 0.00 0.00 0.00 2.59
382 383 7.634671 TCCGTATCTAGACAAATGTTAGACA 57.365 36.000 0.00 0.00 0.00 3.41
383 384 8.058667 TCCGTATCTAGACAAATGTTAGACAA 57.941 34.615 0.00 0.36 0.00 3.18
384 385 8.188799 TCCGTATCTAGACAAATGTTAGACAAG 58.811 37.037 0.00 1.64 0.00 3.16
385 386 8.188799 CCGTATCTAGACAAATGTTAGACAAGA 58.811 37.037 0.00 0.00 0.00 3.02
386 387 9.569167 CGTATCTAGACAAATGTTAGACAAGAA 57.431 33.333 0.00 0.00 0.00 2.52
393 394 8.912988 AGACAAATGTTAGACAAGAATTTTGGA 58.087 29.630 8.21 0.00 0.00 3.53
394 395 9.528018 GACAAATGTTAGACAAGAATTTTGGAA 57.472 29.630 8.21 0.00 0.00 3.53
395 396 9.313118 ACAAATGTTAGACAAGAATTTTGGAAC 57.687 29.630 8.21 6.67 0.00 3.62
396 397 8.479280 CAAATGTTAGACAAGAATTTTGGAACG 58.521 33.333 5.68 0.00 0.00 3.95
397 398 6.067263 TGTTAGACAAGAATTTTGGAACGG 57.933 37.500 0.00 0.00 0.00 4.44
398 399 5.823570 TGTTAGACAAGAATTTTGGAACGGA 59.176 36.000 0.00 0.00 0.00 4.69
399 400 6.017440 TGTTAGACAAGAATTTTGGAACGGAG 60.017 38.462 0.00 0.00 0.00 4.63
400 401 3.821033 AGACAAGAATTTTGGAACGGAGG 59.179 43.478 0.00 0.00 0.00 4.30
401 402 3.562182 ACAAGAATTTTGGAACGGAGGT 58.438 40.909 0.00 0.00 0.00 3.85
402 403 4.721132 ACAAGAATTTTGGAACGGAGGTA 58.279 39.130 0.00 0.00 0.00 3.08
403 404 4.760204 ACAAGAATTTTGGAACGGAGGTAG 59.240 41.667 0.00 0.00 0.00 3.18
404 405 4.635699 AGAATTTTGGAACGGAGGTAGT 57.364 40.909 0.00 0.00 0.00 2.73
405 406 5.750352 AGAATTTTGGAACGGAGGTAGTA 57.250 39.130 0.00 0.00 0.00 1.82
406 407 6.309389 AGAATTTTGGAACGGAGGTAGTAT 57.691 37.500 0.00 0.00 0.00 2.12
407 408 6.718294 AGAATTTTGGAACGGAGGTAGTATT 58.282 36.000 0.00 0.00 0.00 1.89
408 409 7.854337 AGAATTTTGGAACGGAGGTAGTATTA 58.146 34.615 0.00 0.00 0.00 0.98
409 410 7.767659 AGAATTTTGGAACGGAGGTAGTATTAC 59.232 37.037 0.00 0.00 0.00 1.89
410 411 5.999205 TTTGGAACGGAGGTAGTATTACA 57.001 39.130 0.00 0.00 0.00 2.41
411 412 6.549433 TTTGGAACGGAGGTAGTATTACAT 57.451 37.500 0.00 0.00 0.00 2.29
412 413 7.658525 TTTGGAACGGAGGTAGTATTACATA 57.341 36.000 0.00 0.00 0.00 2.29
413 414 6.639632 TGGAACGGAGGTAGTATTACATAC 57.360 41.667 0.00 0.00 35.99 2.39
415 416 6.263842 TGGAACGGAGGTAGTATTACATACTG 59.736 42.308 6.67 0.00 45.24 2.74
416 417 5.702349 ACGGAGGTAGTATTACATACTGC 57.298 43.478 6.67 5.29 45.24 4.40
417 418 5.383476 ACGGAGGTAGTATTACATACTGCT 58.617 41.667 10.61 0.10 45.24 4.24
418 419 5.832060 ACGGAGGTAGTATTACATACTGCTT 59.168 40.000 10.61 4.62 45.24 3.91
419 420 7.000472 ACGGAGGTAGTATTACATACTGCTTA 59.000 38.462 10.61 0.00 45.24 3.09
420 421 7.174599 ACGGAGGTAGTATTACATACTGCTTAG 59.825 40.741 10.61 5.34 45.24 2.18
421 422 7.314393 GGAGGTAGTATTACATACTGCTTAGC 58.686 42.308 10.61 0.00 45.24 3.09
422 423 6.910995 AGGTAGTATTACATACTGCTTAGCG 58.089 40.000 10.61 0.00 45.24 4.26
423 424 6.713903 AGGTAGTATTACATACTGCTTAGCGA 59.286 38.462 10.61 0.00 45.24 4.93
424 425 6.800892 GGTAGTATTACATACTGCTTAGCGAC 59.199 42.308 10.61 0.00 45.24 5.19
425 426 6.636562 AGTATTACATACTGCTTAGCGACT 57.363 37.500 0.00 0.00 44.07 4.18
426 427 6.670233 AGTATTACATACTGCTTAGCGACTC 58.330 40.000 0.00 0.00 44.07 3.36
427 428 2.873133 ACATACTGCTTAGCGACTCC 57.127 50.000 0.00 0.00 0.00 3.85
428 429 2.379972 ACATACTGCTTAGCGACTCCT 58.620 47.619 0.00 0.00 0.00 3.69
429 430 3.552875 ACATACTGCTTAGCGACTCCTA 58.447 45.455 0.00 0.00 0.00 2.94
430 431 3.952323 ACATACTGCTTAGCGACTCCTAA 59.048 43.478 0.00 0.00 0.00 2.69
431 432 2.943449 ACTGCTTAGCGACTCCTAAC 57.057 50.000 0.00 0.00 0.00 2.34
432 433 1.477295 ACTGCTTAGCGACTCCTAACC 59.523 52.381 0.00 0.00 0.00 2.85
433 434 0.454600 TGCTTAGCGACTCCTAACCG 59.545 55.000 0.00 0.00 0.00 4.44
434 435 0.737219 GCTTAGCGACTCCTAACCGA 59.263 55.000 0.00 0.00 0.00 4.69
435 436 1.133790 GCTTAGCGACTCCTAACCGAA 59.866 52.381 0.00 0.00 0.00 4.30
436 437 2.795117 CTTAGCGACTCCTAACCGAAC 58.205 52.381 0.00 0.00 0.00 3.95
437 438 2.119801 TAGCGACTCCTAACCGAACT 57.880 50.000 0.00 0.00 0.00 3.01
438 439 0.810016 AGCGACTCCTAACCGAACTC 59.190 55.000 0.00 0.00 0.00 3.01
439 440 0.810016 GCGACTCCTAACCGAACTCT 59.190 55.000 0.00 0.00 0.00 3.24
440 441 2.012673 GCGACTCCTAACCGAACTCTA 58.987 52.381 0.00 0.00 0.00 2.43
441 442 2.223226 GCGACTCCTAACCGAACTCTAC 60.223 54.545 0.00 0.00 0.00 2.59
442 443 2.354199 CGACTCCTAACCGAACTCTACC 59.646 54.545 0.00 0.00 0.00 3.18
443 444 3.619419 GACTCCTAACCGAACTCTACCT 58.381 50.000 0.00 0.00 0.00 3.08
444 445 4.015764 GACTCCTAACCGAACTCTACCTT 58.984 47.826 0.00 0.00 0.00 3.50
445 446 4.414677 ACTCCTAACCGAACTCTACCTTT 58.585 43.478 0.00 0.00 0.00 3.11
446 447 5.574188 ACTCCTAACCGAACTCTACCTTTA 58.426 41.667 0.00 0.00 0.00 1.85
447 448 5.417266 ACTCCTAACCGAACTCTACCTTTAC 59.583 44.000 0.00 0.00 0.00 2.01
448 449 5.324409 TCCTAACCGAACTCTACCTTTACA 58.676 41.667 0.00 0.00 0.00 2.41
449 450 5.416952 TCCTAACCGAACTCTACCTTTACAG 59.583 44.000 0.00 0.00 0.00 2.74
450 451 5.416952 CCTAACCGAACTCTACCTTTACAGA 59.583 44.000 0.00 0.00 0.00 3.41
451 452 5.997384 AACCGAACTCTACCTTTACAGAT 57.003 39.130 0.00 0.00 0.00 2.90
452 453 5.579564 ACCGAACTCTACCTTTACAGATC 57.420 43.478 0.00 0.00 0.00 2.75
453 454 5.014858 ACCGAACTCTACCTTTACAGATCA 58.985 41.667 0.00 0.00 0.00 2.92
454 455 5.479375 ACCGAACTCTACCTTTACAGATCAA 59.521 40.000 0.00 0.00 0.00 2.57
455 456 6.037098 CCGAACTCTACCTTTACAGATCAAG 58.963 44.000 0.00 0.00 0.00 3.02
456 457 6.350277 CCGAACTCTACCTTTACAGATCAAGT 60.350 42.308 0.00 0.00 0.00 3.16
457 458 7.091443 CGAACTCTACCTTTACAGATCAAGTT 58.909 38.462 0.00 0.00 0.00 2.66
458 459 7.599245 CGAACTCTACCTTTACAGATCAAGTTT 59.401 37.037 0.00 0.00 0.00 2.66
459 460 9.924650 GAACTCTACCTTTACAGATCAAGTTTA 57.075 33.333 0.00 0.00 0.00 2.01
460 461 9.930693 AACTCTACCTTTACAGATCAAGTTTAG 57.069 33.333 0.00 0.00 0.00 1.85
461 462 9.310449 ACTCTACCTTTACAGATCAAGTTTAGA 57.690 33.333 0.00 0.00 0.00 2.10
464 465 9.930693 CTACCTTTACAGATCAAGTTTAGAAGT 57.069 33.333 0.00 0.00 0.00 3.01
465 466 8.608844 ACCTTTACAGATCAAGTTTAGAAGTG 57.391 34.615 0.00 0.00 0.00 3.16
466 467 8.429641 ACCTTTACAGATCAAGTTTAGAAGTGA 58.570 33.333 0.00 0.00 0.00 3.41
467 468 9.273016 CCTTTACAGATCAAGTTTAGAAGTGAA 57.727 33.333 0.00 0.00 0.00 3.18
469 470 9.832445 TTTACAGATCAAGTTTAGAAGTGAACT 57.168 29.630 0.00 0.00 37.69 3.01
470 471 7.954788 ACAGATCAAGTTTAGAAGTGAACTC 57.045 36.000 0.00 0.00 35.17 3.01
471 472 7.731054 ACAGATCAAGTTTAGAAGTGAACTCT 58.269 34.615 0.00 0.00 35.17 3.24
472 473 7.655328 ACAGATCAAGTTTAGAAGTGAACTCTG 59.345 37.037 0.00 0.00 35.17 3.35
473 474 7.869937 CAGATCAAGTTTAGAAGTGAACTCTGA 59.130 37.037 0.00 0.00 35.17 3.27
474 475 8.087750 AGATCAAGTTTAGAAGTGAACTCTGAG 58.912 37.037 2.45 2.45 35.17 3.35
475 476 7.113658 TCAAGTTTAGAAGTGAACTCTGAGT 57.886 36.000 4.06 4.06 35.17 3.41
476 477 7.556844 TCAAGTTTAGAAGTGAACTCTGAGTT 58.443 34.615 22.20 22.20 41.95 3.01
477 478 8.692710 TCAAGTTTAGAAGTGAACTCTGAGTTA 58.307 33.333 22.08 8.89 38.80 2.24
478 479 9.482627 CAAGTTTAGAAGTGAACTCTGAGTTAT 57.517 33.333 22.08 9.40 38.80 1.89
483 484 9.742144 TTAGAAGTGAACTCTGAGTTATACTCT 57.258 33.333 26.60 24.66 45.27 3.24
485 486 9.169592 AGAAGTGAACTCTGAGTTATACTCTAC 57.830 37.037 26.60 21.81 45.27 2.59
486 487 8.865420 AAGTGAACTCTGAGTTATACTCTACA 57.135 34.615 26.60 15.85 45.27 2.74
487 488 8.865420 AGTGAACTCTGAGTTATACTCTACAA 57.135 34.615 22.08 0.00 45.27 2.41
488 489 9.298250 AGTGAACTCTGAGTTATACTCTACAAA 57.702 33.333 22.08 0.00 45.27 2.83
489 490 9.909644 GTGAACTCTGAGTTATACTCTACAAAA 57.090 33.333 22.08 0.00 45.27 2.44
490 491 9.909644 TGAACTCTGAGTTATACTCTACAAAAC 57.090 33.333 22.08 6.17 45.27 2.43
503 504 6.838382 ACTCTACAAAACTTATGAAGGTGGT 58.162 36.000 0.00 0.00 0.00 4.16
504 505 7.287810 ACTCTACAAAACTTATGAAGGTGGTT 58.712 34.615 0.00 0.00 0.00 3.67
505 506 8.434392 ACTCTACAAAACTTATGAAGGTGGTTA 58.566 33.333 0.00 0.00 0.00 2.85
506 507 9.280174 CTCTACAAAACTTATGAAGGTGGTTAA 57.720 33.333 0.00 0.00 0.00 2.01
507 508 9.059260 TCTACAAAACTTATGAAGGTGGTTAAC 57.941 33.333 0.00 0.00 0.00 2.01
508 509 6.731164 ACAAAACTTATGAAGGTGGTTAACG 58.269 36.000 0.00 0.00 0.00 3.18
509 510 6.543100 ACAAAACTTATGAAGGTGGTTAACGA 59.457 34.615 0.00 0.00 0.00 3.85
510 511 6.796705 AAACTTATGAAGGTGGTTAACGAG 57.203 37.500 0.00 0.00 0.00 4.18
511 512 4.828829 ACTTATGAAGGTGGTTAACGAGG 58.171 43.478 0.00 0.00 0.00 4.63
512 513 2.109425 ATGAAGGTGGTTAACGAGGC 57.891 50.000 0.00 0.00 0.00 4.70
513 514 0.759959 TGAAGGTGGTTAACGAGGCA 59.240 50.000 0.00 0.00 0.00 4.75
514 515 1.141254 TGAAGGTGGTTAACGAGGCAA 59.859 47.619 0.00 0.00 0.00 4.52
515 516 2.224670 TGAAGGTGGTTAACGAGGCAAT 60.225 45.455 0.00 0.00 0.00 3.56
516 517 2.109425 AGGTGGTTAACGAGGCAATC 57.891 50.000 0.00 0.00 0.00 2.67
517 518 1.349688 AGGTGGTTAACGAGGCAATCA 59.650 47.619 0.00 0.00 0.00 2.57
518 519 2.026262 AGGTGGTTAACGAGGCAATCAT 60.026 45.455 0.00 0.00 0.00 2.45
519 520 2.354821 GGTGGTTAACGAGGCAATCATC 59.645 50.000 0.00 0.00 0.00 2.92
520 521 3.270877 GTGGTTAACGAGGCAATCATCT 58.729 45.455 0.00 0.00 0.00 2.90
521 522 4.439057 GTGGTTAACGAGGCAATCATCTA 58.561 43.478 0.00 0.00 0.00 1.98
522 523 4.873827 GTGGTTAACGAGGCAATCATCTAA 59.126 41.667 0.00 0.00 0.00 2.10
523 524 5.006746 GTGGTTAACGAGGCAATCATCTAAG 59.993 44.000 0.00 0.00 0.00 2.18
524 525 5.116882 GGTTAACGAGGCAATCATCTAAGT 58.883 41.667 0.00 0.00 0.00 2.24
525 526 5.585047 GGTTAACGAGGCAATCATCTAAGTT 59.415 40.000 0.00 0.00 0.00 2.66
526 527 6.759827 GGTTAACGAGGCAATCATCTAAGTTA 59.240 38.462 0.00 0.00 0.00 2.24
527 528 7.441458 GGTTAACGAGGCAATCATCTAAGTTAT 59.559 37.037 0.00 0.00 0.00 1.89
528 529 8.488764 GTTAACGAGGCAATCATCTAAGTTATC 58.511 37.037 0.00 0.00 0.00 1.75
529 530 5.542779 ACGAGGCAATCATCTAAGTTATCC 58.457 41.667 0.00 0.00 0.00 2.59
530 531 5.070446 ACGAGGCAATCATCTAAGTTATCCA 59.930 40.000 0.00 0.00 0.00 3.41
531 532 5.406780 CGAGGCAATCATCTAAGTTATCCAC 59.593 44.000 0.00 0.00 0.00 4.02
532 533 5.625150 AGGCAATCATCTAAGTTATCCACC 58.375 41.667 0.00 0.00 0.00 4.61
533 534 4.452455 GGCAATCATCTAAGTTATCCACCG 59.548 45.833 0.00 0.00 0.00 4.94
534 535 5.057149 GCAATCATCTAAGTTATCCACCGT 58.943 41.667 0.00 0.00 0.00 4.83
535 536 5.050091 GCAATCATCTAAGTTATCCACCGTG 60.050 44.000 0.00 0.00 0.00 4.94
536 537 4.054780 TCATCTAAGTTATCCACCGTGC 57.945 45.455 0.00 0.00 0.00 5.34
537 538 3.449377 TCATCTAAGTTATCCACCGTGCA 59.551 43.478 0.00 0.00 0.00 4.57
538 539 3.965379 TCTAAGTTATCCACCGTGCAA 57.035 42.857 0.00 0.00 0.00 4.08
539 540 3.857052 TCTAAGTTATCCACCGTGCAAG 58.143 45.455 0.00 0.00 0.00 4.01
540 541 2.561478 AAGTTATCCACCGTGCAAGT 57.439 45.000 0.00 0.00 0.00 3.16
541 542 2.561478 AGTTATCCACCGTGCAAGTT 57.439 45.000 0.00 0.00 0.00 2.66
542 543 2.858745 AGTTATCCACCGTGCAAGTTT 58.141 42.857 0.00 0.00 0.00 2.66
543 544 3.219281 AGTTATCCACCGTGCAAGTTTT 58.781 40.909 0.00 0.00 0.00 2.43
544 545 3.004315 AGTTATCCACCGTGCAAGTTTTG 59.996 43.478 0.00 0.00 0.00 2.44
545 546 1.398692 ATCCACCGTGCAAGTTTTGT 58.601 45.000 0.00 0.00 0.00 2.83
546 547 1.178276 TCCACCGTGCAAGTTTTGTT 58.822 45.000 0.00 0.00 0.00 2.83
547 548 1.135257 TCCACCGTGCAAGTTTTGTTG 60.135 47.619 0.00 0.00 0.00 3.33
548 549 1.403514 CCACCGTGCAAGTTTTGTTGT 60.404 47.619 0.00 0.00 0.00 3.32
549 550 2.333014 CACCGTGCAAGTTTTGTTGTT 58.667 42.857 0.00 0.00 0.00 2.83
550 551 2.091899 CACCGTGCAAGTTTTGTTGTTG 59.908 45.455 0.00 0.00 0.00 3.33
551 552 2.029828 ACCGTGCAAGTTTTGTTGTTGA 60.030 40.909 0.00 0.00 0.00 3.18
552 553 2.344142 CCGTGCAAGTTTTGTTGTTGAC 59.656 45.455 0.00 0.00 0.00 3.18
553 554 2.344142 CGTGCAAGTTTTGTTGTTGACC 59.656 45.455 0.00 0.00 0.00 4.02
554 555 3.321497 GTGCAAGTTTTGTTGTTGACCA 58.679 40.909 0.00 0.00 0.00 4.02
555 556 3.932089 GTGCAAGTTTTGTTGTTGACCAT 59.068 39.130 0.00 0.00 0.00 3.55
556 557 4.391523 GTGCAAGTTTTGTTGTTGACCATT 59.608 37.500 0.00 0.00 0.00 3.16
557 558 4.999950 TGCAAGTTTTGTTGTTGACCATTT 59.000 33.333 0.00 0.00 0.00 2.32
558 559 6.091441 GTGCAAGTTTTGTTGTTGACCATTTA 59.909 34.615 0.00 0.00 0.00 1.40
559 560 6.650807 TGCAAGTTTTGTTGTTGACCATTTAA 59.349 30.769 0.00 0.00 0.00 1.52
560 561 7.335422 TGCAAGTTTTGTTGTTGACCATTTAAT 59.665 29.630 0.00 0.00 0.00 1.40
561 562 8.180920 GCAAGTTTTGTTGTTGACCATTTAATT 58.819 29.630 0.00 0.00 0.00 1.40
569 570 9.522804 TGTTGTTGACCATTTAATTTAGTTGAC 57.477 29.630 0.00 0.00 0.00 3.18
570 571 9.522804 GTTGTTGACCATTTAATTTAGTTGACA 57.477 29.630 0.00 0.00 0.00 3.58
571 572 9.522804 TTGTTGACCATTTAATTTAGTTGACAC 57.477 29.630 0.00 0.00 0.00 3.67
572 573 8.687242 TGTTGACCATTTAATTTAGTTGACACA 58.313 29.630 0.00 0.00 0.00 3.72
573 574 9.691362 GTTGACCATTTAATTTAGTTGACACAT 57.309 29.630 0.00 0.00 0.00 3.21
586 587 9.689976 TTTAGTTGACACATTTATGTTGGAATG 57.310 29.630 0.00 0.00 39.39 2.67
587 588 6.690530 AGTTGACACATTTATGTTGGAATGG 58.309 36.000 0.00 0.00 39.39 3.16
588 589 6.493115 AGTTGACACATTTATGTTGGAATGGA 59.507 34.615 0.00 0.00 39.39 3.41
589 590 6.513806 TGACACATTTATGTTGGAATGGAG 57.486 37.500 0.00 0.00 39.39 3.86
590 591 5.418524 TGACACATTTATGTTGGAATGGAGG 59.581 40.000 0.00 0.00 39.39 4.30
591 592 5.579047 ACACATTTATGTTGGAATGGAGGA 58.421 37.500 0.00 0.00 39.39 3.71
592 593 6.015918 ACACATTTATGTTGGAATGGAGGAA 58.984 36.000 0.00 0.00 39.39 3.36
593 594 6.153340 ACACATTTATGTTGGAATGGAGGAAG 59.847 38.462 0.00 0.00 39.39 3.46
594 595 6.153340 CACATTTATGTTGGAATGGAGGAAGT 59.847 38.462 0.00 0.00 39.39 3.01
595 596 7.339212 CACATTTATGTTGGAATGGAGGAAGTA 59.661 37.037 0.00 0.00 39.39 2.24
596 597 8.061304 ACATTTATGTTGGAATGGAGGAAGTAT 58.939 33.333 0.00 0.00 37.90 2.12
597 598 9.573166 CATTTATGTTGGAATGGAGGAAGTATA 57.427 33.333 0.00 0.00 31.28 1.47
598 599 9.799106 ATTTATGTTGGAATGGAGGAAGTATAG 57.201 33.333 0.00 0.00 0.00 1.31
599 600 6.831664 ATGTTGGAATGGAGGAAGTATAGT 57.168 37.500 0.00 0.00 0.00 2.12
600 601 7.931015 ATGTTGGAATGGAGGAAGTATAGTA 57.069 36.000 0.00 0.00 0.00 1.82
601 602 7.931015 TGTTGGAATGGAGGAAGTATAGTAT 57.069 36.000 0.00 0.00 0.00 2.12
602 603 8.331931 TGTTGGAATGGAGGAAGTATAGTATT 57.668 34.615 0.00 0.00 0.00 1.89
603 604 8.429641 TGTTGGAATGGAGGAAGTATAGTATTC 58.570 37.037 0.00 0.00 0.00 1.75
604 605 7.554959 TGGAATGGAGGAAGTATAGTATTCC 57.445 40.000 0.00 0.00 44.49 3.01
605 606 7.079700 TGGAATGGAGGAAGTATAGTATTCCA 58.920 38.462 13.02 13.02 46.21 3.53
606 607 7.016268 TGGAATGGAGGAAGTATAGTATTCCAC 59.984 40.741 13.02 7.68 46.21 4.02
607 608 6.591750 ATGGAGGAAGTATAGTATTCCACG 57.408 41.667 11.84 0.00 46.21 4.94
608 609 4.280174 TGGAGGAAGTATAGTATTCCACGC 59.720 45.833 11.84 3.68 46.21 5.34
609 610 4.280174 GGAGGAAGTATAGTATTCCACGCA 59.720 45.833 11.84 0.00 46.21 5.24
610 611 5.047235 GGAGGAAGTATAGTATTCCACGCAT 60.047 44.000 11.84 0.00 46.21 4.73
629 630 4.514612 GCATTTGCACGGTGAATCATCAC 61.515 47.826 13.29 0.36 46.66 3.06
777 784 0.249741 AACGCGGCGAGCCTTATTAT 60.250 50.000 30.94 0.00 44.76 1.28
784 792 2.353803 GGCGAGCCTTATTATCCACGAT 60.354 50.000 6.90 0.00 0.00 3.73
799 807 2.833582 GATCGAGGCGACCCCAGA 60.834 66.667 0.00 0.00 39.18 3.86
823 831 4.935495 CACGCACCCACACTGGCT 62.935 66.667 0.00 0.00 35.79 4.75
994 1010 2.525629 GGCTAGCCTCCCCTCTCC 60.526 72.222 27.17 0.00 0.00 3.71
995 1011 2.612251 GCTAGCCTCCCCTCTCCT 59.388 66.667 2.29 0.00 0.00 3.69
996 1012 1.731324 GGCTAGCCTCCCCTCTCCTA 61.731 65.000 27.17 0.00 0.00 2.94
1013 1029 6.488683 CCTCTCCTACTCCTAGATAACACTTG 59.511 46.154 0.00 0.00 0.00 3.16
1015 1031 4.579340 TCCTACTCCTAGATAACACTTGCG 59.421 45.833 0.00 0.00 0.00 4.85
1675 1693 2.185867 GGACCGCCGTGCTATTGA 59.814 61.111 0.00 0.00 0.00 2.57
1677 1695 1.022451 GGACCGCCGTGCTATTGAAA 61.022 55.000 0.00 0.00 0.00 2.69
1678 1696 0.800012 GACCGCCGTGCTATTGAAAA 59.200 50.000 0.00 0.00 0.00 2.29
1679 1697 1.400494 GACCGCCGTGCTATTGAAAAT 59.600 47.619 0.00 0.00 0.00 1.82
1680 1698 1.132262 ACCGCCGTGCTATTGAAAATG 59.868 47.619 0.00 0.00 0.00 2.32
1681 1699 1.400142 CCGCCGTGCTATTGAAAATGA 59.600 47.619 0.00 0.00 0.00 2.57
1682 1700 2.159448 CCGCCGTGCTATTGAAAATGAA 60.159 45.455 0.00 0.00 0.00 2.57
1684 1702 3.426159 CGCCGTGCTATTGAAAATGAAGT 60.426 43.478 0.00 0.00 0.00 3.01
1685 1703 4.098416 GCCGTGCTATTGAAAATGAAGTC 58.902 43.478 0.00 0.00 0.00 3.01
1686 1704 4.334443 CCGTGCTATTGAAAATGAAGTCG 58.666 43.478 0.00 0.00 0.00 4.18
1760 1787 1.134461 CATCCAGGCTCACTTCTCAGG 60.134 57.143 0.00 0.00 0.00 3.86
1761 1788 1.078567 CCAGGCTCACTTCTCAGGC 60.079 63.158 0.00 0.00 35.42 4.85
1762 1789 1.551908 CCAGGCTCACTTCTCAGGCT 61.552 60.000 0.00 0.00 46.03 4.58
1763 1790 0.108233 CAGGCTCACTTCTCAGGCTC 60.108 60.000 0.00 0.00 43.40 4.70
1764 1791 0.252193 AGGCTCACTTCTCAGGCTCT 60.252 55.000 0.00 0.00 41.54 4.09
1765 1792 0.175531 GGCTCACTTCTCAGGCTCTC 59.824 60.000 0.00 0.00 32.47 3.20
1766 1793 0.894141 GCTCACTTCTCAGGCTCTCA 59.106 55.000 0.00 0.00 0.00 3.27
1767 1794 1.135024 GCTCACTTCTCAGGCTCTCAG 60.135 57.143 0.00 0.00 0.00 3.35
1985 2037 6.162079 AGATGCGTGTCTTCTATATCAATGG 58.838 40.000 0.00 0.00 0.00 3.16
2053 2105 2.002586 CTTGTTGAGGTCACCTATGCG 58.997 52.381 0.00 0.00 31.76 4.73
2093 2145 2.093394 TCATGGCCTGGATTGCAAATTG 60.093 45.455 1.71 0.00 0.00 2.32
2213 2265 5.491982 CCTGTACAGAGGTTTGCTCTTTAT 58.508 41.667 24.68 0.00 0.00 1.40
2220 2272 6.151817 ACAGAGGTTTGCTCTTTATGATTTCC 59.848 38.462 0.00 0.00 0.00 3.13
2224 2276 4.882671 TTGCTCTTTATGATTTCCGAGC 57.117 40.909 0.00 0.00 42.97 5.03
2418 2471 4.163427 TGACTCTGGAATTCTTCTCCTGT 58.837 43.478 5.23 0.00 34.44 4.00
2561 2614 6.245408 AGGTACTGCAGAATTTTCATGGTTA 58.755 36.000 23.35 0.00 37.18 2.85
2585 2638 1.816835 TCCTAGTTGTACTGCACGAGG 59.183 52.381 11.04 11.04 0.00 4.63
2596 2649 4.060038 ACTGCACGAGGTCATATTTAGG 57.940 45.455 0.00 0.00 0.00 2.69
2636 2689 8.812513 TTGACTTGTGGATTTTATCAGATGAT 57.187 30.769 0.31 0.31 38.51 2.45
2738 2791 2.434428 CCAGACGGTACACTCACTAGT 58.566 52.381 0.00 0.00 35.91 2.57
2833 2887 2.203998 ACAGTGCCTAGGCCACCT 60.204 61.111 30.81 19.98 41.09 4.00
3002 3056 3.370527 GGTCTTTTCCAGTAGCCATAGCA 60.371 47.826 0.00 0.00 43.56 3.49
3049 3103 2.863809 AGTCCAACAGGTTAGCTTTGG 58.136 47.619 14.59 14.59 40.01 3.28
3130 3184 5.975988 ATATGAACACCTGGGTCTGTATT 57.024 39.130 0.00 0.00 0.00 1.89
3132 3186 5.772393 ATGAACACCTGGGTCTGTATTAA 57.228 39.130 0.00 0.00 0.00 1.40
3133 3187 5.772393 TGAACACCTGGGTCTGTATTAAT 57.228 39.130 0.00 0.00 0.00 1.40
3134 3188 5.741011 TGAACACCTGGGTCTGTATTAATC 58.259 41.667 0.00 0.00 0.00 1.75
3135 3189 5.487488 TGAACACCTGGGTCTGTATTAATCT 59.513 40.000 0.00 0.00 0.00 2.40
3136 3190 5.615925 ACACCTGGGTCTGTATTAATCTC 57.384 43.478 0.00 0.00 0.00 2.75
3137 3191 5.281314 ACACCTGGGTCTGTATTAATCTCT 58.719 41.667 0.00 0.00 0.00 3.10
3138 3192 6.441222 ACACCTGGGTCTGTATTAATCTCTA 58.559 40.000 0.00 0.00 0.00 2.43
3139 3193 6.551601 ACACCTGGGTCTGTATTAATCTCTAG 59.448 42.308 0.00 0.00 0.00 2.43
3317 3371 4.457949 TGTGTGTAAATGAGCTCGACTCTA 59.542 41.667 9.64 0.00 46.41 2.43
3384 3439 6.599356 ACCATTTGTTATGTTTACCTTCCC 57.401 37.500 0.00 0.00 0.00 3.97
3473 3528 7.109006 TCTTTTCGGAGTACGTAAAATGTTC 57.891 36.000 0.00 0.00 40.49 3.18
3737 3917 4.331168 ACACTAAGAAAAGCTGATGCGATC 59.669 41.667 0.00 0.00 45.42 3.69
3794 3974 4.274421 TGAGAGTCTAATTACTCGCACG 57.726 45.455 9.84 0.00 46.87 5.34
3848 4028 1.470098 CATGGTTAACTGTGAGCCAGC 59.530 52.381 6.87 0.00 45.68 4.85
3853 4033 3.304726 GGTTAACTGTGAGCCAGCTTTTC 60.305 47.826 5.42 0.00 45.68 2.29
3857 4037 0.183492 TGTGAGCCAGCTTTTCCTGT 59.817 50.000 0.00 0.00 0.00 4.00
3986 4166 7.148255 GCAGTCAATGTAAAGTCATGGATTGTA 60.148 37.037 0.00 0.00 37.61 2.41
3987 4167 8.729756 CAGTCAATGTAAAGTCATGGATTGTAA 58.270 33.333 0.00 0.00 33.60 2.41
3989 4169 8.184192 GTCAATGTAAAGTCATGGATTGTAAGG 58.816 37.037 0.00 0.00 31.52 2.69
3994 4178 8.038944 TGTAAAGTCATGGATTGTAAGGTAGAC 58.961 37.037 0.00 0.00 0.00 2.59
4019 4203 9.344772 ACCCTTTACATATTAATACGAATGCAA 57.655 29.630 0.00 0.00 0.00 4.08
4456 4645 1.607628 GATCACAATCTGCCCATCTGC 59.392 52.381 0.00 0.00 0.00 4.26
4461 4650 1.099879 AATCTGCCCATCTGCGCTTC 61.100 55.000 9.73 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.978146 AGCTTAGCTCCGACCACCAT 60.978 55.000 0.00 0.00 30.62 3.55
1 2 1.192146 AAGCTTAGCTCCGACCACCA 61.192 55.000 7.36 0.00 38.25 4.17
2 3 0.741221 CAAGCTTAGCTCCGACCACC 60.741 60.000 7.36 0.00 38.25 4.61
3 4 0.741221 CCAAGCTTAGCTCCGACCAC 60.741 60.000 7.36 0.00 38.25 4.16
4 5 1.596934 CCAAGCTTAGCTCCGACCA 59.403 57.895 7.36 0.00 38.25 4.02
5 6 1.153349 CCCAAGCTTAGCTCCGACC 60.153 63.158 7.36 0.00 38.25 4.79
6 7 1.815840 GCCCAAGCTTAGCTCCGAC 60.816 63.158 7.36 0.00 38.25 4.79
7 8 2.584608 GCCCAAGCTTAGCTCCGA 59.415 61.111 7.36 0.00 38.25 4.55
48 49 4.976925 CCCTATGCCCGCTCGCAG 62.977 72.222 0.99 0.00 43.26 5.18
50 51 4.671569 CTCCCTATGCCCGCTCGC 62.672 72.222 0.00 0.00 0.00 5.03
51 52 3.996124 CCTCCCTATGCCCGCTCG 61.996 72.222 0.00 0.00 0.00 5.03
52 53 4.321966 GCCTCCCTATGCCCGCTC 62.322 72.222 0.00 0.00 0.00 5.03
54 55 4.632974 CTGCCTCCCTATGCCCGC 62.633 72.222 0.00 0.00 0.00 6.13
55 56 2.844362 TCTGCCTCCCTATGCCCG 60.844 66.667 0.00 0.00 0.00 6.13
56 57 1.460305 TCTCTGCCTCCCTATGCCC 60.460 63.158 0.00 0.00 0.00 5.36
57 58 0.762461 ACTCTCTGCCTCCCTATGCC 60.762 60.000 0.00 0.00 0.00 4.40
58 59 1.616374 GTACTCTCTGCCTCCCTATGC 59.384 57.143 0.00 0.00 0.00 3.14
59 60 2.950781 TGTACTCTCTGCCTCCCTATG 58.049 52.381 0.00 0.00 0.00 2.23
60 61 3.913370 ATGTACTCTCTGCCTCCCTAT 57.087 47.619 0.00 0.00 0.00 2.57
61 62 4.415846 TCTTATGTACTCTCTGCCTCCCTA 59.584 45.833 0.00 0.00 0.00 3.53
62 63 3.205507 TCTTATGTACTCTCTGCCTCCCT 59.794 47.826 0.00 0.00 0.00 4.20
63 64 3.567397 TCTTATGTACTCTCTGCCTCCC 58.433 50.000 0.00 0.00 0.00 4.30
64 65 5.599999 TTTCTTATGTACTCTCTGCCTCC 57.400 43.478 0.00 0.00 0.00 4.30
65 66 6.045955 CCTTTTCTTATGTACTCTCTGCCTC 58.954 44.000 0.00 0.00 0.00 4.70
66 67 5.721960 TCCTTTTCTTATGTACTCTCTGCCT 59.278 40.000 0.00 0.00 0.00 4.75
67 68 5.978814 TCCTTTTCTTATGTACTCTCTGCC 58.021 41.667 0.00 0.00 0.00 4.85
68 69 9.771534 ATTATCCTTTTCTTATGTACTCTCTGC 57.228 33.333 0.00 0.00 0.00 4.26
77 78 9.490379 GGACGTATCATTATCCTTTTCTTATGT 57.510 33.333 0.00 0.00 0.00 2.29
78 79 8.648097 CGGACGTATCATTATCCTTTTCTTATG 58.352 37.037 0.00 0.00 0.00 1.90
79 80 8.582437 TCGGACGTATCATTATCCTTTTCTTAT 58.418 33.333 0.00 0.00 0.00 1.73
80 81 7.944061 TCGGACGTATCATTATCCTTTTCTTA 58.056 34.615 0.00 0.00 0.00 2.10
81 82 6.812998 TCGGACGTATCATTATCCTTTTCTT 58.187 36.000 0.00 0.00 0.00 2.52
82 83 6.401047 TCGGACGTATCATTATCCTTTTCT 57.599 37.500 0.00 0.00 0.00 2.52
83 84 6.145696 CCTTCGGACGTATCATTATCCTTTTC 59.854 42.308 0.00 0.00 0.00 2.29
84 85 5.989777 CCTTCGGACGTATCATTATCCTTTT 59.010 40.000 0.00 0.00 0.00 2.27
85 86 5.539048 CCTTCGGACGTATCATTATCCTTT 58.461 41.667 0.00 0.00 0.00 3.11
86 87 4.560919 GCCTTCGGACGTATCATTATCCTT 60.561 45.833 0.00 0.00 0.00 3.36
87 88 3.056749 GCCTTCGGACGTATCATTATCCT 60.057 47.826 0.00 0.00 0.00 3.24
88 89 3.251571 GCCTTCGGACGTATCATTATCC 58.748 50.000 0.00 0.00 0.00 2.59
89 90 2.915463 CGCCTTCGGACGTATCATTATC 59.085 50.000 0.00 0.00 0.00 1.75
90 91 2.942710 CGCCTTCGGACGTATCATTAT 58.057 47.619 0.00 0.00 0.00 1.28
91 92 2.410785 CGCCTTCGGACGTATCATTA 57.589 50.000 0.00 0.00 0.00 1.90
92 93 3.267900 CGCCTTCGGACGTATCATT 57.732 52.632 0.00 0.00 0.00 2.57
107 108 4.830765 TACACTGCATCGGCCGCC 62.831 66.667 23.51 11.95 40.13 6.13
108 109 2.588877 ATACACTGCATCGGCCGC 60.589 61.111 23.51 7.33 40.13 6.53
109 110 1.956170 GGATACACTGCATCGGCCG 60.956 63.158 22.12 22.12 40.13 6.13
110 111 1.956170 CGGATACACTGCATCGGCC 60.956 63.158 0.00 0.00 40.13 6.13
111 112 3.630204 CGGATACACTGCATCGGC 58.370 61.111 0.00 0.00 41.68 5.54
117 118 2.176273 CAGCCAGCGGATACACTGC 61.176 63.158 0.00 0.00 45.53 4.40
118 119 0.105593 ATCAGCCAGCGGATACACTG 59.894 55.000 3.32 0.00 46.46 3.66
119 120 0.833287 AATCAGCCAGCGGATACACT 59.167 50.000 5.70 0.00 31.03 3.55
120 121 0.940126 CAATCAGCCAGCGGATACAC 59.060 55.000 5.70 0.00 31.03 2.90
121 122 0.829990 TCAATCAGCCAGCGGATACA 59.170 50.000 5.70 0.00 31.03 2.29
122 123 1.869767 CTTCAATCAGCCAGCGGATAC 59.130 52.381 5.70 0.00 31.03 2.24
123 124 1.762370 TCTTCAATCAGCCAGCGGATA 59.238 47.619 5.70 0.00 31.03 2.59
124 125 0.543277 TCTTCAATCAGCCAGCGGAT 59.457 50.000 0.00 0.00 32.50 4.18
125 126 0.324614 TTCTTCAATCAGCCAGCGGA 59.675 50.000 0.00 0.00 0.00 5.54
126 127 1.131883 CTTTCTTCAATCAGCCAGCGG 59.868 52.381 0.00 0.00 0.00 5.52
127 128 2.079158 TCTTTCTTCAATCAGCCAGCG 58.921 47.619 0.00 0.00 0.00 5.18
128 129 3.341823 TCTCTTTCTTCAATCAGCCAGC 58.658 45.455 0.00 0.00 0.00 4.85
129 130 4.155644 GGTTCTCTTTCTTCAATCAGCCAG 59.844 45.833 0.00 0.00 0.00 4.85
130 131 4.074970 GGTTCTCTTTCTTCAATCAGCCA 58.925 43.478 0.00 0.00 0.00 4.75
131 132 4.331108 AGGTTCTCTTTCTTCAATCAGCC 58.669 43.478 0.00 0.00 0.00 4.85
132 133 5.244755 AGAGGTTCTCTTTCTTCAATCAGC 58.755 41.667 0.00 0.00 37.60 4.26
145 146 1.627834 CCCAGCTTCAAGAGGTTCTCT 59.372 52.381 0.00 0.00 43.37 3.10
146 147 1.349357 ACCCAGCTTCAAGAGGTTCTC 59.651 52.381 0.00 0.00 32.70 2.87
147 148 1.439543 ACCCAGCTTCAAGAGGTTCT 58.560 50.000 0.00 0.00 32.70 3.01
148 149 2.278332 AACCCAGCTTCAAGAGGTTC 57.722 50.000 1.99 0.00 36.00 3.62
149 150 2.755952 AAACCCAGCTTCAAGAGGTT 57.244 45.000 1.99 1.99 42.55 3.50
150 151 2.755952 AAAACCCAGCTTCAAGAGGT 57.244 45.000 0.00 0.00 36.26 3.85
189 190 1.282382 TTGGTGTTAGGGGAGTAGCC 58.718 55.000 0.00 0.00 0.00 3.93
190 191 3.428413 TTTTGGTGTTAGGGGAGTAGC 57.572 47.619 0.00 0.00 0.00 3.58
191 192 4.981812 AGTTTTTGGTGTTAGGGGAGTAG 58.018 43.478 0.00 0.00 0.00 2.57
192 193 5.391577 AAGTTTTTGGTGTTAGGGGAGTA 57.608 39.130 0.00 0.00 0.00 2.59
193 194 3.965470 AGTTTTTGGTGTTAGGGGAGT 57.035 42.857 0.00 0.00 0.00 3.85
194 195 6.492087 TCAATAAGTTTTTGGTGTTAGGGGAG 59.508 38.462 6.26 0.00 0.00 4.30
195 196 6.374588 TCAATAAGTTTTTGGTGTTAGGGGA 58.625 36.000 6.26 0.00 0.00 4.81
196 197 6.658188 TCAATAAGTTTTTGGTGTTAGGGG 57.342 37.500 6.26 0.00 0.00 4.79
197 198 7.947282 TCTTCAATAAGTTTTTGGTGTTAGGG 58.053 34.615 6.26 0.00 34.13 3.53
198 199 9.810545 TTTCTTCAATAAGTTTTTGGTGTTAGG 57.189 29.630 6.26 0.00 34.13 2.69
201 202 9.883142 TCATTTCTTCAATAAGTTTTTGGTGTT 57.117 25.926 6.26 0.00 34.13 3.32
202 203 9.533253 CTCATTTCTTCAATAAGTTTTTGGTGT 57.467 29.630 6.26 0.00 34.13 4.16
203 204 9.748708 TCTCATTTCTTCAATAAGTTTTTGGTG 57.251 29.630 6.26 1.12 34.13 4.17
204 205 9.971922 CTCTCATTTCTTCAATAAGTTTTTGGT 57.028 29.630 6.26 0.00 34.13 3.67
205 206 8.919661 GCTCTCATTTCTTCAATAAGTTTTTGG 58.080 33.333 6.26 0.00 34.13 3.28
206 207 9.688592 AGCTCTCATTTCTTCAATAAGTTTTTG 57.311 29.630 0.03 0.03 34.13 2.44
207 208 9.688592 CAGCTCTCATTTCTTCAATAAGTTTTT 57.311 29.630 0.00 0.00 34.13 1.94
208 209 8.854117 ACAGCTCTCATTTCTTCAATAAGTTTT 58.146 29.630 0.00 0.00 34.13 2.43
209 210 8.401490 ACAGCTCTCATTTCTTCAATAAGTTT 57.599 30.769 0.00 0.00 34.13 2.66
210 211 7.992754 ACAGCTCTCATTTCTTCAATAAGTT 57.007 32.000 0.00 0.00 34.13 2.66
211 212 7.094463 CCAACAGCTCTCATTTCTTCAATAAGT 60.094 37.037 0.00 0.00 34.13 2.24
212 213 7.120285 TCCAACAGCTCTCATTTCTTCAATAAG 59.880 37.037 0.00 0.00 0.00 1.73
213 214 6.942005 TCCAACAGCTCTCATTTCTTCAATAA 59.058 34.615 0.00 0.00 0.00 1.40
214 215 6.475504 TCCAACAGCTCTCATTTCTTCAATA 58.524 36.000 0.00 0.00 0.00 1.90
215 216 5.319453 TCCAACAGCTCTCATTTCTTCAAT 58.681 37.500 0.00 0.00 0.00 2.57
216 217 4.717877 TCCAACAGCTCTCATTTCTTCAA 58.282 39.130 0.00 0.00 0.00 2.69
217 218 4.040829 TCTCCAACAGCTCTCATTTCTTCA 59.959 41.667 0.00 0.00 0.00 3.02
218 219 4.573900 TCTCCAACAGCTCTCATTTCTTC 58.426 43.478 0.00 0.00 0.00 2.87
219 220 4.630644 TCTCCAACAGCTCTCATTTCTT 57.369 40.909 0.00 0.00 0.00 2.52
220 221 4.515361 CATCTCCAACAGCTCTCATTTCT 58.485 43.478 0.00 0.00 0.00 2.52
221 222 3.065095 GCATCTCCAACAGCTCTCATTTC 59.935 47.826 0.00 0.00 0.00 2.17
222 223 3.015327 GCATCTCCAACAGCTCTCATTT 58.985 45.455 0.00 0.00 0.00 2.32
223 224 2.239150 AGCATCTCCAACAGCTCTCATT 59.761 45.455 0.00 0.00 30.05 2.57
224 225 1.838715 AGCATCTCCAACAGCTCTCAT 59.161 47.619 0.00 0.00 30.05 2.90
225 226 1.273759 AGCATCTCCAACAGCTCTCA 58.726 50.000 0.00 0.00 30.05 3.27
237 238 5.218587 GGGTTGTCCATTGTAGAGCATCTC 61.219 50.000 0.00 0.00 40.43 2.75
238 239 3.370953 GGGTTGTCCATTGTAGAGCATCT 60.371 47.826 0.00 0.00 42.09 2.90
239 240 2.945668 GGGTTGTCCATTGTAGAGCATC 59.054 50.000 0.00 0.00 35.00 3.91
240 241 2.578021 AGGGTTGTCCATTGTAGAGCAT 59.422 45.455 0.00 0.00 38.24 3.79
241 242 1.985159 AGGGTTGTCCATTGTAGAGCA 59.015 47.619 0.00 0.00 38.24 4.26
242 243 2.789409 AGGGTTGTCCATTGTAGAGC 57.211 50.000 0.00 0.00 38.24 4.09
243 244 8.980481 AATAATTAGGGTTGTCCATTGTAGAG 57.020 34.615 0.00 0.00 38.24 2.43
244 245 9.184523 CAAATAATTAGGGTTGTCCATTGTAGA 57.815 33.333 0.00 0.00 38.24 2.59
245 246 9.184523 TCAAATAATTAGGGTTGTCCATTGTAG 57.815 33.333 0.00 0.00 38.24 2.74
246 247 9.535170 TTCAAATAATTAGGGTTGTCCATTGTA 57.465 29.630 0.00 0.00 38.24 2.41
247 248 8.311109 GTTCAAATAATTAGGGTTGTCCATTGT 58.689 33.333 0.00 0.00 38.24 2.71
248 249 8.310382 TGTTCAAATAATTAGGGTTGTCCATTG 58.690 33.333 0.00 0.00 38.24 2.82
249 250 8.429237 TGTTCAAATAATTAGGGTTGTCCATT 57.571 30.769 0.00 0.00 38.24 3.16
250 251 8.429237 TTGTTCAAATAATTAGGGTTGTCCAT 57.571 30.769 0.00 0.00 38.24 3.41
251 252 7.841282 TTGTTCAAATAATTAGGGTTGTCCA 57.159 32.000 0.00 0.00 38.24 4.02
263 264 9.420118 TGCAGGGAGTATAATTGTTCAAATAAT 57.580 29.630 0.00 0.00 0.00 1.28
264 265 8.815565 TGCAGGGAGTATAATTGTTCAAATAA 57.184 30.769 0.00 0.00 0.00 1.40
265 266 8.995027 ATGCAGGGAGTATAATTGTTCAAATA 57.005 30.769 0.00 0.00 0.00 1.40
266 267 7.014615 GGATGCAGGGAGTATAATTGTTCAAAT 59.985 37.037 0.00 0.00 0.00 2.32
267 268 6.321181 GGATGCAGGGAGTATAATTGTTCAAA 59.679 38.462 0.00 0.00 0.00 2.69
268 269 5.827797 GGATGCAGGGAGTATAATTGTTCAA 59.172 40.000 0.00 0.00 0.00 2.69
269 270 5.376625 GGATGCAGGGAGTATAATTGTTCA 58.623 41.667 0.00 0.00 0.00 3.18
270 271 4.762251 GGGATGCAGGGAGTATAATTGTTC 59.238 45.833 0.00 0.00 0.00 3.18
271 272 4.167892 TGGGATGCAGGGAGTATAATTGTT 59.832 41.667 0.00 0.00 0.00 2.83
272 273 3.721575 TGGGATGCAGGGAGTATAATTGT 59.278 43.478 0.00 0.00 0.00 2.71
273 274 4.371624 TGGGATGCAGGGAGTATAATTG 57.628 45.455 0.00 0.00 0.00 2.32
274 275 5.402054 TTTGGGATGCAGGGAGTATAATT 57.598 39.130 0.00 0.00 0.00 1.40
275 276 5.402054 TTTTGGGATGCAGGGAGTATAAT 57.598 39.130 0.00 0.00 0.00 1.28
276 277 4.871871 TTTTGGGATGCAGGGAGTATAA 57.128 40.909 0.00 0.00 0.00 0.98
277 278 5.134339 AGAATTTTGGGATGCAGGGAGTATA 59.866 40.000 0.00 0.00 0.00 1.47
278 279 3.979501 ATTTTGGGATGCAGGGAGTAT 57.020 42.857 0.00 0.00 0.00 2.12
279 280 3.269381 AGAATTTTGGGATGCAGGGAGTA 59.731 43.478 0.00 0.00 0.00 2.59
280 281 2.043526 AGAATTTTGGGATGCAGGGAGT 59.956 45.455 0.00 0.00 0.00 3.85
281 282 2.743553 AGAATTTTGGGATGCAGGGAG 58.256 47.619 0.00 0.00 0.00 4.30
282 283 2.833338 CAAGAATTTTGGGATGCAGGGA 59.167 45.455 0.00 0.00 0.00 4.20
283 284 2.568509 ACAAGAATTTTGGGATGCAGGG 59.431 45.455 0.00 0.00 0.00 4.45
284 285 3.512724 AGACAAGAATTTTGGGATGCAGG 59.487 43.478 0.00 0.00 0.00 4.85
285 286 4.796038 AGACAAGAATTTTGGGATGCAG 57.204 40.909 0.00 0.00 0.00 4.41
286 287 6.662865 TTAAGACAAGAATTTTGGGATGCA 57.337 33.333 0.00 0.00 0.00 3.96
287 288 8.552083 AATTTAAGACAAGAATTTTGGGATGC 57.448 30.769 5.68 0.00 0.00 3.91
290 291 9.541143 GACAAATTTAAGACAAGAATTTTGGGA 57.459 29.630 0.00 0.00 33.39 4.37
291 292 9.546428 AGACAAATTTAAGACAAGAATTTTGGG 57.454 29.630 0.00 0.00 33.39 4.12
334 335 9.601217 GGATGTATCTAACACTAAAACATGACT 57.399 33.333 0.00 0.00 42.09 3.41
335 336 8.540492 CGGATGTATCTAACACTAAAACATGAC 58.460 37.037 0.00 0.00 42.09 3.06
336 337 8.255206 ACGGATGTATCTAACACTAAAACATGA 58.745 33.333 0.00 0.00 42.09 3.07
337 338 8.420374 ACGGATGTATCTAACACTAAAACATG 57.580 34.615 0.00 0.00 42.09 3.21
354 355 9.346005 TCTAACATTTGTCTAGATACGGATGTA 57.654 33.333 0.00 0.00 31.38 2.29
355 356 8.136165 GTCTAACATTTGTCTAGATACGGATGT 58.864 37.037 0.00 1.47 32.30 3.06
356 357 8.135529 TGTCTAACATTTGTCTAGATACGGATG 58.864 37.037 0.00 0.85 0.00 3.51
357 358 8.234136 TGTCTAACATTTGTCTAGATACGGAT 57.766 34.615 0.00 0.00 0.00 4.18
358 359 7.634671 TGTCTAACATTTGTCTAGATACGGA 57.365 36.000 0.00 0.00 0.00 4.69
359 360 8.188799 TCTTGTCTAACATTTGTCTAGATACGG 58.811 37.037 0.00 0.00 0.00 4.02
360 361 9.569167 TTCTTGTCTAACATTTGTCTAGATACG 57.431 33.333 0.00 0.00 0.00 3.06
367 368 8.912988 TCCAAAATTCTTGTCTAACATTTGTCT 58.087 29.630 0.00 0.00 0.00 3.41
368 369 9.528018 TTCCAAAATTCTTGTCTAACATTTGTC 57.472 29.630 0.00 0.00 0.00 3.18
369 370 9.313118 GTTCCAAAATTCTTGTCTAACATTTGT 57.687 29.630 0.00 0.00 0.00 2.83
370 371 8.479280 CGTTCCAAAATTCTTGTCTAACATTTG 58.521 33.333 0.00 0.00 0.00 2.32
371 372 7.651704 CCGTTCCAAAATTCTTGTCTAACATTT 59.348 33.333 0.00 0.00 0.00 2.32
372 373 7.013846 TCCGTTCCAAAATTCTTGTCTAACATT 59.986 33.333 0.00 0.00 0.00 2.71
373 374 6.488683 TCCGTTCCAAAATTCTTGTCTAACAT 59.511 34.615 0.00 0.00 0.00 2.71
374 375 5.823570 TCCGTTCCAAAATTCTTGTCTAACA 59.176 36.000 0.00 0.00 0.00 2.41
375 376 6.308371 TCCGTTCCAAAATTCTTGTCTAAC 57.692 37.500 0.00 0.00 0.00 2.34
376 377 5.472137 CCTCCGTTCCAAAATTCTTGTCTAA 59.528 40.000 0.00 0.00 0.00 2.10
377 378 5.001232 CCTCCGTTCCAAAATTCTTGTCTA 58.999 41.667 0.00 0.00 0.00 2.59
378 379 3.821033 CCTCCGTTCCAAAATTCTTGTCT 59.179 43.478 0.00 0.00 0.00 3.41
379 380 3.568430 ACCTCCGTTCCAAAATTCTTGTC 59.432 43.478 0.00 0.00 0.00 3.18
380 381 3.562182 ACCTCCGTTCCAAAATTCTTGT 58.438 40.909 0.00 0.00 0.00 3.16
381 382 4.760204 ACTACCTCCGTTCCAAAATTCTTG 59.240 41.667 0.00 0.00 0.00 3.02
382 383 4.981812 ACTACCTCCGTTCCAAAATTCTT 58.018 39.130 0.00 0.00 0.00 2.52
383 384 4.635699 ACTACCTCCGTTCCAAAATTCT 57.364 40.909 0.00 0.00 0.00 2.40
384 385 6.997239 AATACTACCTCCGTTCCAAAATTC 57.003 37.500 0.00 0.00 0.00 2.17
385 386 7.396418 TGTAATACTACCTCCGTTCCAAAATT 58.604 34.615 0.00 0.00 0.00 1.82
386 387 6.949715 TGTAATACTACCTCCGTTCCAAAAT 58.050 36.000 0.00 0.00 0.00 1.82
387 388 6.357579 TGTAATACTACCTCCGTTCCAAAA 57.642 37.500 0.00 0.00 0.00 2.44
388 389 5.999205 TGTAATACTACCTCCGTTCCAAA 57.001 39.130 0.00 0.00 0.00 3.28
389 390 7.042797 GTATGTAATACTACCTCCGTTCCAA 57.957 40.000 0.00 0.00 46.23 3.53
390 391 6.639632 GTATGTAATACTACCTCCGTTCCA 57.360 41.667 0.00 0.00 46.23 3.53
404 405 5.768662 AGGAGTCGCTAAGCAGTATGTAATA 59.231 40.000 0.00 0.00 39.31 0.98
405 406 4.585162 AGGAGTCGCTAAGCAGTATGTAAT 59.415 41.667 0.00 0.00 39.31 1.89
406 407 3.952323 AGGAGTCGCTAAGCAGTATGTAA 59.048 43.478 0.00 0.00 39.31 2.41
407 408 3.552875 AGGAGTCGCTAAGCAGTATGTA 58.447 45.455 0.00 0.00 39.31 2.29
408 409 2.379972 AGGAGTCGCTAAGCAGTATGT 58.620 47.619 0.00 0.00 39.31 2.29
409 410 4.291783 GTTAGGAGTCGCTAAGCAGTATG 58.708 47.826 2.42 0.00 40.87 2.39
410 411 3.318557 GGTTAGGAGTCGCTAAGCAGTAT 59.681 47.826 18.11 0.00 34.72 2.12
411 412 2.686915 GGTTAGGAGTCGCTAAGCAGTA 59.313 50.000 18.11 0.00 34.72 2.74
412 413 1.477295 GGTTAGGAGTCGCTAAGCAGT 59.523 52.381 18.11 0.00 34.72 4.40
413 414 1.534175 CGGTTAGGAGTCGCTAAGCAG 60.534 57.143 20.67 13.83 34.38 4.24
414 415 0.454600 CGGTTAGGAGTCGCTAAGCA 59.545 55.000 20.67 0.00 34.38 3.91
415 416 0.737219 TCGGTTAGGAGTCGCTAAGC 59.263 55.000 15.18 15.18 0.00 3.09
416 417 2.422832 AGTTCGGTTAGGAGTCGCTAAG 59.577 50.000 2.42 0.00 0.00 2.18
417 418 2.421424 GAGTTCGGTTAGGAGTCGCTAA 59.579 50.000 0.00 0.00 0.00 3.09
418 419 2.012673 GAGTTCGGTTAGGAGTCGCTA 58.987 52.381 0.00 0.00 0.00 4.26
419 420 0.810016 GAGTTCGGTTAGGAGTCGCT 59.190 55.000 0.00 0.00 0.00 4.93
420 421 0.810016 AGAGTTCGGTTAGGAGTCGC 59.190 55.000 0.00 0.00 0.00 5.19
421 422 2.354199 GGTAGAGTTCGGTTAGGAGTCG 59.646 54.545 0.00 0.00 0.00 4.18
422 423 3.619419 AGGTAGAGTTCGGTTAGGAGTC 58.381 50.000 0.00 0.00 0.00 3.36
423 424 3.735720 AGGTAGAGTTCGGTTAGGAGT 57.264 47.619 0.00 0.00 0.00 3.85
424 425 5.416952 TGTAAAGGTAGAGTTCGGTTAGGAG 59.583 44.000 0.00 0.00 0.00 3.69
425 426 5.324409 TGTAAAGGTAGAGTTCGGTTAGGA 58.676 41.667 0.00 0.00 0.00 2.94
426 427 5.416952 TCTGTAAAGGTAGAGTTCGGTTAGG 59.583 44.000 0.00 0.00 0.00 2.69
427 428 6.506500 TCTGTAAAGGTAGAGTTCGGTTAG 57.493 41.667 0.00 0.00 0.00 2.34
428 429 6.660521 TGATCTGTAAAGGTAGAGTTCGGTTA 59.339 38.462 0.00 0.00 0.00 2.85
429 430 5.479375 TGATCTGTAAAGGTAGAGTTCGGTT 59.521 40.000 0.00 0.00 0.00 4.44
430 431 5.014858 TGATCTGTAAAGGTAGAGTTCGGT 58.985 41.667 0.00 0.00 0.00 4.69
431 432 5.578005 TGATCTGTAAAGGTAGAGTTCGG 57.422 43.478 0.00 0.00 0.00 4.30
432 433 6.622549 ACTTGATCTGTAAAGGTAGAGTTCG 58.377 40.000 0.00 0.00 0.00 3.95
433 434 8.834749 AAACTTGATCTGTAAAGGTAGAGTTC 57.165 34.615 0.00 0.00 0.00 3.01
434 435 9.930693 CTAAACTTGATCTGTAAAGGTAGAGTT 57.069 33.333 0.00 0.00 0.00 3.01
435 436 9.310449 TCTAAACTTGATCTGTAAAGGTAGAGT 57.690 33.333 0.00 0.00 0.00 3.24
438 439 9.930693 ACTTCTAAACTTGATCTGTAAAGGTAG 57.069 33.333 0.00 0.00 0.00 3.18
439 440 9.706691 CACTTCTAAACTTGATCTGTAAAGGTA 57.293 33.333 0.00 0.00 0.00 3.08
440 441 8.429641 TCACTTCTAAACTTGATCTGTAAAGGT 58.570 33.333 0.00 0.00 0.00 3.50
441 442 8.833231 TCACTTCTAAACTTGATCTGTAAAGG 57.167 34.615 0.00 0.00 0.00 3.11
443 444 9.832445 AGTTCACTTCTAAACTTGATCTGTAAA 57.168 29.630 0.00 0.00 31.81 2.01
444 445 9.477484 GAGTTCACTTCTAAACTTGATCTGTAA 57.523 33.333 0.00 0.00 35.90 2.41
445 446 8.861086 AGAGTTCACTTCTAAACTTGATCTGTA 58.139 33.333 0.00 0.00 35.90 2.74
446 447 7.655328 CAGAGTTCACTTCTAAACTTGATCTGT 59.345 37.037 0.00 0.00 35.90 3.41
447 448 7.869937 TCAGAGTTCACTTCTAAACTTGATCTG 59.130 37.037 0.00 0.00 35.90 2.90
448 449 7.957002 TCAGAGTTCACTTCTAAACTTGATCT 58.043 34.615 0.00 0.00 35.90 2.75
449 450 7.870445 ACTCAGAGTTCACTTCTAAACTTGATC 59.130 37.037 0.00 0.00 35.90 2.92
450 451 7.731054 ACTCAGAGTTCACTTCTAAACTTGAT 58.269 34.615 0.00 0.00 35.90 2.57
451 452 7.113658 ACTCAGAGTTCACTTCTAAACTTGA 57.886 36.000 0.00 0.00 35.90 3.02
452 453 7.778470 AACTCAGAGTTCACTTCTAAACTTG 57.222 36.000 10.27 0.00 31.77 3.16
477 478 8.603304 ACCACCTTCATAAGTTTTGTAGAGTAT 58.397 33.333 2.28 0.00 0.00 2.12
478 479 7.970102 ACCACCTTCATAAGTTTTGTAGAGTA 58.030 34.615 2.28 0.00 0.00 2.59
479 480 6.838382 ACCACCTTCATAAGTTTTGTAGAGT 58.162 36.000 2.28 0.00 0.00 3.24
480 481 7.745620 AACCACCTTCATAAGTTTTGTAGAG 57.254 36.000 2.28 0.00 0.00 2.43
481 482 9.059260 GTTAACCACCTTCATAAGTTTTGTAGA 57.941 33.333 0.00 0.00 0.00 2.59
482 483 8.013378 CGTTAACCACCTTCATAAGTTTTGTAG 58.987 37.037 0.00 0.00 0.00 2.74
483 484 7.714377 TCGTTAACCACCTTCATAAGTTTTGTA 59.286 33.333 0.00 0.00 0.00 2.41
484 485 6.543100 TCGTTAACCACCTTCATAAGTTTTGT 59.457 34.615 0.00 0.00 0.00 2.83
485 486 6.961576 TCGTTAACCACCTTCATAAGTTTTG 58.038 36.000 0.00 0.00 0.00 2.44
486 487 6.206048 CCTCGTTAACCACCTTCATAAGTTTT 59.794 38.462 0.00 0.00 0.00 2.43
487 488 5.704053 CCTCGTTAACCACCTTCATAAGTTT 59.296 40.000 0.00 0.00 0.00 2.66
488 489 5.243207 CCTCGTTAACCACCTTCATAAGTT 58.757 41.667 0.00 0.00 0.00 2.66
489 490 4.828829 CCTCGTTAACCACCTTCATAAGT 58.171 43.478 0.00 0.00 0.00 2.24
490 491 3.621715 GCCTCGTTAACCACCTTCATAAG 59.378 47.826 0.00 0.00 0.00 1.73
491 492 3.008157 TGCCTCGTTAACCACCTTCATAA 59.992 43.478 0.00 0.00 0.00 1.90
492 493 2.568062 TGCCTCGTTAACCACCTTCATA 59.432 45.455 0.00 0.00 0.00 2.15
493 494 1.349688 TGCCTCGTTAACCACCTTCAT 59.650 47.619 0.00 0.00 0.00 2.57
494 495 0.759959 TGCCTCGTTAACCACCTTCA 59.240 50.000 0.00 0.00 0.00 3.02
495 496 1.886886 TTGCCTCGTTAACCACCTTC 58.113 50.000 0.00 0.00 0.00 3.46
496 497 2.224670 TGATTGCCTCGTTAACCACCTT 60.225 45.455 0.00 0.00 0.00 3.50
497 498 1.349688 TGATTGCCTCGTTAACCACCT 59.650 47.619 0.00 0.00 0.00 4.00
498 499 1.816074 TGATTGCCTCGTTAACCACC 58.184 50.000 0.00 0.00 0.00 4.61
499 500 3.270877 AGATGATTGCCTCGTTAACCAC 58.729 45.455 0.00 0.00 0.00 4.16
500 501 3.627395 AGATGATTGCCTCGTTAACCA 57.373 42.857 0.00 0.00 0.00 3.67
501 502 5.116882 ACTTAGATGATTGCCTCGTTAACC 58.883 41.667 0.00 0.00 0.00 2.85
502 503 6.663944 AACTTAGATGATTGCCTCGTTAAC 57.336 37.500 0.00 0.00 0.00 2.01
503 504 7.656137 GGATAACTTAGATGATTGCCTCGTTAA 59.344 37.037 0.00 0.00 0.00 2.01
504 505 7.152645 GGATAACTTAGATGATTGCCTCGTTA 58.847 38.462 0.00 0.00 0.00 3.18
505 506 5.992217 GGATAACTTAGATGATTGCCTCGTT 59.008 40.000 0.00 0.00 0.00 3.85
506 507 5.070446 TGGATAACTTAGATGATTGCCTCGT 59.930 40.000 0.00 0.00 0.00 4.18
507 508 5.406780 GTGGATAACTTAGATGATTGCCTCG 59.593 44.000 0.00 0.00 0.00 4.63
508 509 5.703130 GGTGGATAACTTAGATGATTGCCTC 59.297 44.000 0.00 0.00 0.00 4.70
509 510 5.625150 GGTGGATAACTTAGATGATTGCCT 58.375 41.667 0.00 0.00 0.00 4.75
510 511 4.452455 CGGTGGATAACTTAGATGATTGCC 59.548 45.833 0.00 0.00 0.00 4.52
511 512 5.050091 CACGGTGGATAACTTAGATGATTGC 60.050 44.000 0.00 0.00 0.00 3.56
512 513 5.050091 GCACGGTGGATAACTTAGATGATTG 60.050 44.000 10.60 0.00 0.00 2.67
513 514 5.057149 GCACGGTGGATAACTTAGATGATT 58.943 41.667 10.60 0.00 0.00 2.57
514 515 4.100963 TGCACGGTGGATAACTTAGATGAT 59.899 41.667 10.60 0.00 0.00 2.45
515 516 3.449377 TGCACGGTGGATAACTTAGATGA 59.551 43.478 10.60 0.00 0.00 2.92
516 517 3.792401 TGCACGGTGGATAACTTAGATG 58.208 45.455 10.60 0.00 0.00 2.90
517 518 4.081087 ACTTGCACGGTGGATAACTTAGAT 60.081 41.667 10.60 0.00 0.00 1.98
518 519 3.259876 ACTTGCACGGTGGATAACTTAGA 59.740 43.478 10.60 0.00 0.00 2.10
519 520 3.596214 ACTTGCACGGTGGATAACTTAG 58.404 45.455 10.60 2.82 0.00 2.18
520 521 3.688694 ACTTGCACGGTGGATAACTTA 57.311 42.857 10.60 0.00 0.00 2.24
521 522 2.561478 ACTTGCACGGTGGATAACTT 57.439 45.000 10.60 0.00 0.00 2.66
522 523 2.561478 AACTTGCACGGTGGATAACT 57.439 45.000 10.60 0.00 0.00 2.24
523 524 3.243267 ACAAAACTTGCACGGTGGATAAC 60.243 43.478 10.60 0.00 0.00 1.89
524 525 2.952978 ACAAAACTTGCACGGTGGATAA 59.047 40.909 10.60 0.00 0.00 1.75
525 526 2.577700 ACAAAACTTGCACGGTGGATA 58.422 42.857 10.60 0.00 0.00 2.59
526 527 1.398692 ACAAAACTTGCACGGTGGAT 58.601 45.000 10.60 0.00 0.00 3.41
527 528 1.135257 CAACAAAACTTGCACGGTGGA 60.135 47.619 10.60 3.79 0.00 4.02
528 529 1.276415 CAACAAAACTTGCACGGTGG 58.724 50.000 10.60 0.00 0.00 4.61
529 530 1.989430 ACAACAAAACTTGCACGGTG 58.011 45.000 3.15 3.15 0.00 4.94
530 531 2.029828 TCAACAACAAAACTTGCACGGT 60.030 40.909 0.00 0.00 0.00 4.83
531 532 2.344142 GTCAACAACAAAACTTGCACGG 59.656 45.455 0.00 0.00 0.00 4.94
532 533 2.344142 GGTCAACAACAAAACTTGCACG 59.656 45.455 0.00 0.00 0.00 5.34
533 534 3.321497 TGGTCAACAACAAAACTTGCAC 58.679 40.909 0.00 0.00 0.00 4.57
534 535 3.667497 TGGTCAACAACAAAACTTGCA 57.333 38.095 0.00 0.00 0.00 4.08
535 536 5.544136 AAATGGTCAACAACAAAACTTGC 57.456 34.783 0.00 0.00 0.00 4.01
543 544 9.522804 GTCAACTAAATTAAATGGTCAACAACA 57.477 29.630 0.00 0.00 0.00 3.33
544 545 9.522804 TGTCAACTAAATTAAATGGTCAACAAC 57.477 29.630 0.00 0.00 0.00 3.32
545 546 9.522804 GTGTCAACTAAATTAAATGGTCAACAA 57.477 29.630 0.00 0.00 0.00 2.83
546 547 8.687242 TGTGTCAACTAAATTAAATGGTCAACA 58.313 29.630 0.00 0.00 0.00 3.33
547 548 9.691362 ATGTGTCAACTAAATTAAATGGTCAAC 57.309 29.630 0.00 0.00 0.00 3.18
560 561 9.689976 CATTCCAACATAAATGTGTCAACTAAA 57.310 29.630 0.00 0.00 41.61 1.85
561 562 8.303156 CCATTCCAACATAAATGTGTCAACTAA 58.697 33.333 0.00 0.00 41.61 2.24
562 563 7.667635 TCCATTCCAACATAAATGTGTCAACTA 59.332 33.333 0.00 0.00 41.61 2.24
563 564 6.493115 TCCATTCCAACATAAATGTGTCAACT 59.507 34.615 0.00 0.00 41.61 3.16
564 565 6.686630 TCCATTCCAACATAAATGTGTCAAC 58.313 36.000 0.00 0.00 41.61 3.18
565 566 6.071447 CCTCCATTCCAACATAAATGTGTCAA 60.071 38.462 0.00 0.00 41.61 3.18
566 567 5.418524 CCTCCATTCCAACATAAATGTGTCA 59.581 40.000 0.00 0.00 41.61 3.58
567 568 5.652014 TCCTCCATTCCAACATAAATGTGTC 59.348 40.000 0.00 0.00 41.61 3.67
568 569 5.579047 TCCTCCATTCCAACATAAATGTGT 58.421 37.500 0.00 0.00 41.61 3.72
569 570 6.153340 ACTTCCTCCATTCCAACATAAATGTG 59.847 38.462 0.00 0.00 41.61 3.21
570 571 6.256053 ACTTCCTCCATTCCAACATAAATGT 58.744 36.000 0.00 0.00 44.20 2.71
571 572 6.780457 ACTTCCTCCATTCCAACATAAATG 57.220 37.500 0.00 0.00 33.57 2.32
572 573 9.799106 CTATACTTCCTCCATTCCAACATAAAT 57.201 33.333 0.00 0.00 0.00 1.40
573 574 8.778059 ACTATACTTCCTCCATTCCAACATAAA 58.222 33.333 0.00 0.00 0.00 1.40
574 575 8.331931 ACTATACTTCCTCCATTCCAACATAA 57.668 34.615 0.00 0.00 0.00 1.90
575 576 7.931015 ACTATACTTCCTCCATTCCAACATA 57.069 36.000 0.00 0.00 0.00 2.29
576 577 6.831664 ACTATACTTCCTCCATTCCAACAT 57.168 37.500 0.00 0.00 0.00 2.71
577 578 7.931015 ATACTATACTTCCTCCATTCCAACA 57.069 36.000 0.00 0.00 0.00 3.33
578 579 7.878644 GGAATACTATACTTCCTCCATTCCAAC 59.121 40.741 0.00 0.00 39.84 3.77
579 580 7.570982 TGGAATACTATACTTCCTCCATTCCAA 59.429 37.037 9.61 0.00 44.29 3.53
580 581 7.016268 GTGGAATACTATACTTCCTCCATTCCA 59.984 40.741 8.28 8.28 44.77 3.53
581 582 7.387643 GTGGAATACTATACTTCCTCCATTCC 58.612 42.308 0.00 0.00 41.29 3.01
582 583 7.091443 CGTGGAATACTATACTTCCTCCATTC 58.909 42.308 3.27 0.00 41.29 2.67
583 584 6.518537 GCGTGGAATACTATACTTCCTCCATT 60.519 42.308 3.27 0.00 41.29 3.16
584 585 5.047235 GCGTGGAATACTATACTTCCTCCAT 60.047 44.000 3.27 0.00 41.29 3.41
585 586 4.280174 GCGTGGAATACTATACTTCCTCCA 59.720 45.833 3.27 0.00 41.29 3.86
586 587 4.280174 TGCGTGGAATACTATACTTCCTCC 59.720 45.833 3.27 0.00 41.29 4.30
587 588 5.449107 TGCGTGGAATACTATACTTCCTC 57.551 43.478 3.27 0.00 41.29 3.71
588 589 6.420913 AATGCGTGGAATACTATACTTCCT 57.579 37.500 3.27 0.00 41.29 3.36
589 590 6.565999 GCAAATGCGTGGAATACTATACTTCC 60.566 42.308 0.00 0.00 41.13 3.46
590 591 6.018262 TGCAAATGCGTGGAATACTATACTTC 60.018 38.462 0.35 0.00 45.83 3.01
591 592 5.820423 TGCAAATGCGTGGAATACTATACTT 59.180 36.000 0.35 0.00 45.83 2.24
592 593 5.236478 GTGCAAATGCGTGGAATACTATACT 59.764 40.000 0.35 0.00 45.83 2.12
593 594 5.440685 GTGCAAATGCGTGGAATACTATAC 58.559 41.667 0.35 0.00 45.83 1.47
594 595 4.210328 CGTGCAAATGCGTGGAATACTATA 59.790 41.667 0.35 0.00 45.83 1.31
595 596 3.002246 CGTGCAAATGCGTGGAATACTAT 59.998 43.478 0.35 0.00 45.83 2.12
596 597 2.350192 CGTGCAAATGCGTGGAATACTA 59.650 45.455 0.35 0.00 45.83 1.82
597 598 1.130373 CGTGCAAATGCGTGGAATACT 59.870 47.619 0.35 0.00 45.83 2.12
598 599 1.534028 CGTGCAAATGCGTGGAATAC 58.466 50.000 0.35 0.00 45.83 1.89
599 600 0.449786 CCGTGCAAATGCGTGGAATA 59.550 50.000 9.40 0.00 45.83 1.75
600 601 1.212490 CCGTGCAAATGCGTGGAAT 59.788 52.632 9.40 0.00 45.83 3.01
601 602 2.190170 ACCGTGCAAATGCGTGGAA 61.190 52.632 18.87 0.00 45.83 3.53
602 603 2.593148 ACCGTGCAAATGCGTGGA 60.593 55.556 18.87 0.00 45.83 4.02
603 604 2.399511 TTCACCGTGCAAATGCGTGG 62.400 55.000 12.51 12.51 45.83 4.94
604 605 0.387112 ATTCACCGTGCAAATGCGTG 60.387 50.000 0.35 3.54 45.83 5.34
605 606 0.109781 GATTCACCGTGCAAATGCGT 60.110 50.000 0.35 0.00 45.83 5.24
606 607 0.109827 TGATTCACCGTGCAAATGCG 60.110 50.000 0.35 0.00 45.83 4.73
607 608 2.187707 GATGATTCACCGTGCAAATGC 58.812 47.619 0.00 0.00 42.50 3.56
608 609 3.173599 GTGATGATTCACCGTGCAAATG 58.826 45.455 0.00 0.00 45.45 2.32
609 610 3.492421 GTGATGATTCACCGTGCAAAT 57.508 42.857 0.00 0.00 45.45 2.32
610 611 2.987413 GTGATGATTCACCGTGCAAA 57.013 45.000 0.00 0.00 45.45 3.68
629 630 1.320344 AATGCAGGGCTCATGTGCTG 61.320 55.000 18.44 11.37 38.09 4.41
630 631 0.256752 TAATGCAGGGCTCATGTGCT 59.743 50.000 18.44 0.00 38.09 4.40
715 722 2.412112 GCGACGCCTCTCCGTTAT 59.588 61.111 9.14 0.00 42.24 1.89
777 784 3.515286 GGTCGCCTCGATCGTGGA 61.515 66.667 34.01 15.67 38.42 4.02
812 820 4.960866 TGCTGCAGCCAGTGTGGG 62.961 66.667 34.64 0.00 41.26 4.61
813 821 3.667282 GTGCTGCAGCCAGTGTGG 61.667 66.667 34.64 0.00 41.26 4.17
814 822 2.196382 GATGTGCTGCAGCCAGTGTG 62.196 60.000 34.64 0.00 41.26 3.82
815 823 1.970114 GATGTGCTGCAGCCAGTGT 60.970 57.895 34.64 17.06 41.26 3.55
816 824 1.969589 TGATGTGCTGCAGCCAGTG 60.970 57.895 34.64 0.00 41.26 3.66
817 825 1.970114 GTGATGTGCTGCAGCCAGT 60.970 57.895 34.64 20.27 41.26 4.00
818 826 2.875485 GTGATGTGCTGCAGCCAG 59.125 61.111 34.64 0.31 42.13 4.85
819 827 3.051479 CGTGATGTGCTGCAGCCA 61.051 61.111 34.64 29.46 41.18 4.75
820 828 4.471726 GCGTGATGTGCTGCAGCC 62.472 66.667 34.64 25.13 41.18 4.85
821 829 3.729698 TGCGTGATGTGCTGCAGC 61.730 61.111 31.89 31.89 42.50 5.25
822 830 2.175078 GTGCGTGATGTGCTGCAG 59.825 61.111 10.11 10.11 38.14 4.41
823 831 3.714963 CGTGCGTGATGTGCTGCA 61.715 61.111 0.00 0.00 34.44 4.41
826 834 4.986645 TGCCGTGCGTGATGTGCT 62.987 61.111 0.00 0.00 0.00 4.40
989 1005 6.016610 GCAAGTGTTATCTAGGAGTAGGAGAG 60.017 46.154 0.00 0.00 0.00 3.20
990 1006 5.828859 GCAAGTGTTATCTAGGAGTAGGAGA 59.171 44.000 0.00 0.00 0.00 3.71
992 1008 4.579340 CGCAAGTGTTATCTAGGAGTAGGA 59.421 45.833 0.00 0.00 0.00 2.94
994 1010 4.291783 GCGCAAGTGTTATCTAGGAGTAG 58.708 47.826 0.30 0.00 41.68 2.57
995 1011 3.067742 GGCGCAAGTGTTATCTAGGAGTA 59.932 47.826 10.83 0.00 41.68 2.59
996 1012 2.159085 GGCGCAAGTGTTATCTAGGAGT 60.159 50.000 10.83 0.00 41.68 3.85
1659 1677 0.800012 TTTTCAATAGCACGGCGGTC 59.200 50.000 13.24 1.54 0.00 4.79
1662 1680 2.823196 TCATTTTCAATAGCACGGCG 57.177 45.000 4.80 4.80 0.00 6.46
1664 1682 4.334443 CGACTTCATTTTCAATAGCACGG 58.666 43.478 0.00 0.00 0.00 4.94
1665 1683 3.780801 GCGACTTCATTTTCAATAGCACG 59.219 43.478 0.00 0.00 0.00 5.34
1668 1686 3.354397 CGGCGACTTCATTTTCAATAGC 58.646 45.455 0.00 0.00 0.00 2.97
1672 1690 1.265635 CACCGGCGACTTCATTTTCAA 59.734 47.619 9.30 0.00 0.00 2.69
1675 1693 1.862602 GCCACCGGCGACTTCATTTT 61.863 55.000 9.30 0.00 39.62 1.82
1677 1695 2.746277 GCCACCGGCGACTTCATT 60.746 61.111 9.30 0.00 39.62 2.57
1760 1787 1.446966 GAAGTCACCGGCTGAGAGC 60.447 63.158 0.00 0.00 41.46 4.09
1761 1788 0.605589 AAGAAGTCACCGGCTGAGAG 59.394 55.000 0.00 0.00 0.00 3.20
1762 1789 0.318441 CAAGAAGTCACCGGCTGAGA 59.682 55.000 0.00 0.00 0.00 3.27
1763 1790 0.671781 CCAAGAAGTCACCGGCTGAG 60.672 60.000 0.00 0.00 0.00 3.35
1764 1791 1.371183 CCAAGAAGTCACCGGCTGA 59.629 57.895 0.00 1.26 0.00 4.26
1765 1792 2.328099 GCCAAGAAGTCACCGGCTG 61.328 63.158 0.00 0.00 39.73 4.85
1766 1793 2.032681 GCCAAGAAGTCACCGGCT 59.967 61.111 0.00 0.00 39.73 5.52
1767 1794 2.032681 AGCCAAGAAGTCACCGGC 59.967 61.111 0.00 0.00 43.31 6.13
1951 1993 3.182967 AGACACGCATCTCTCGAATTTC 58.817 45.455 0.00 0.00 0.00 2.17
2053 2105 4.445452 TGAGTAACGACTACACCATTCC 57.555 45.455 0.00 0.00 35.45 3.01
2104 2156 3.681593 CAATCCACCCTTTTTCGGTAGA 58.318 45.455 0.00 0.00 30.42 2.59
2106 2158 2.164338 GCAATCCACCCTTTTTCGGTA 58.836 47.619 0.00 0.00 30.42 4.02
2109 2161 2.810439 TTGCAATCCACCCTTTTTCG 57.190 45.000 0.00 0.00 0.00 3.46
2110 2162 8.829612 CATATAATTTGCAATCCACCCTTTTTC 58.170 33.333 0.00 0.00 0.00 2.29
2111 2163 7.282901 GCATATAATTTGCAATCCACCCTTTTT 59.717 33.333 0.00 0.00 39.90 1.94
2112 2164 6.767423 GCATATAATTTGCAATCCACCCTTTT 59.233 34.615 0.00 0.00 39.90 2.27
2213 2265 3.627577 GCAATCTTTAGGCTCGGAAATCA 59.372 43.478 0.00 0.00 0.00 2.57
2220 2272 0.026803 GCACGCAATCTTTAGGCTCG 59.973 55.000 0.00 0.00 0.00 5.03
2224 2276 2.095059 AGCAAAGCACGCAATCTTTAGG 60.095 45.455 0.00 0.00 31.89 2.69
2363 2416 6.127619 GCTCTTGCAGGAACTAAACCATTATT 60.128 38.462 0.00 0.00 36.02 1.40
2364 2417 5.358160 GCTCTTGCAGGAACTAAACCATTAT 59.642 40.000 0.00 0.00 36.02 1.28
2365 2418 4.700213 GCTCTTGCAGGAACTAAACCATTA 59.300 41.667 0.00 0.00 36.02 1.90
2366 2419 3.507622 GCTCTTGCAGGAACTAAACCATT 59.492 43.478 0.00 0.00 36.02 3.16
2367 2420 3.084786 GCTCTTGCAGGAACTAAACCAT 58.915 45.455 0.00 0.00 36.02 3.55
2368 2421 2.504367 GCTCTTGCAGGAACTAAACCA 58.496 47.619 0.00 0.00 36.02 3.67
2561 2614 3.257375 TCGTGCAGTACAACTAGGACAAT 59.743 43.478 0.00 0.00 0.00 2.71
2585 2638 8.903820 AGTTAATTCTTGTGGCCTAAATATGAC 58.096 33.333 3.32 0.00 0.00 3.06
2596 2649 5.831997 ACAAGTCAAGTTAATTCTTGTGGC 58.168 37.500 7.83 0.67 44.20 5.01
2636 2689 7.707624 ATTAGAAGTTGGAAATGCTGAATCA 57.292 32.000 0.00 0.00 0.00 2.57
2738 2791 3.197766 AGTGTGAACCAACTGAGAAGTGA 59.802 43.478 0.00 0.00 0.00 3.41
3002 3056 5.048504 GTGTGTCAAATGGAGATGTCATTGT 60.049 40.000 0.00 0.00 35.31 2.71
3080 3134 9.474920 TTTTCACATAAAGGAAGCAAGTATTTG 57.525 29.630 0.00 0.00 37.36 2.32
3317 3371 9.507329 AATACAGATTGAAATACTGTGTGTTCT 57.493 29.630 0.00 0.00 43.33 3.01
3406 3461 1.318576 AAAAGCGGAGACCCAACAAG 58.681 50.000 0.00 0.00 0.00 3.16
3473 3528 5.335740 CCCGTACTAGTAGTGAATAGCCATG 60.336 48.000 13.29 0.00 0.00 3.66
3794 3974 8.654230 TTCAGATTGTAGAACTCTAATGATGC 57.346 34.615 0.00 0.00 0.00 3.91
3953 4133 5.186996 ACTTTACATTGACTGCAACAAGG 57.813 39.130 13.66 13.66 36.72 3.61
4019 4203 5.179929 GCATTGCCTCTAAATTGCAAAGTTT 59.820 36.000 1.71 2.94 46.82 2.66
4022 4206 4.501071 AGCATTGCCTCTAAATTGCAAAG 58.499 39.130 1.71 0.00 46.82 2.77
4076 4263 5.645929 TCAAGTTGTGAGTTGTCTGCTTTTA 59.354 36.000 2.11 0.00 37.45 1.52
4080 4267 3.266510 TCAAGTTGTGAGTTGTCTGCT 57.733 42.857 2.11 0.00 37.45 4.24
4275 4464 1.131638 AGGCCGCCAGATAATTCAGA 58.868 50.000 13.15 0.00 0.00 3.27
4393 4582 3.364621 GGTGCATGCGTTAAGTGATTTTG 59.635 43.478 14.09 0.00 0.00 2.44
4394 4583 3.005261 TGGTGCATGCGTTAAGTGATTTT 59.995 39.130 14.09 0.00 0.00 1.82
4407 4596 2.490903 AGAGTTCAAATCTGGTGCATGC 59.509 45.455 11.82 11.82 0.00 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.