Multiple sequence alignment - TraesCS1D01G251900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G251900 chr1D 100.000 3761 0 0 1 3761 344283114 344286874 0.000000e+00 6946
1 TraesCS1D01G251900 chr1D 89.877 1867 168 12 919 2770 344676327 344674467 0.000000e+00 2381
2 TraesCS1D01G251900 chr1D 83.983 718 83 21 1 707 487540595 487541291 0.000000e+00 660
3 TraesCS1D01G251900 chr1D 92.857 210 13 1 3554 3761 483475281 483475072 1.700000e-78 303
4 TraesCS1D01G251900 chr1A 96.787 2303 72 2 470 2772 443869525 443871825 0.000000e+00 3842
5 TraesCS1D01G251900 chr1A 89.403 1859 173 11 921 2773 444421849 444420009 0.000000e+00 2320
6 TraesCS1D01G251900 chr1A 82.802 721 89 23 1 707 585580599 585581298 2.480000e-171 612
7 TraesCS1D01G251900 chr1A 95.890 219 9 0 3235 3453 443871830 443872048 4.620000e-94 355
8 TraesCS1D01G251900 chr1B 94.586 1958 60 13 816 2772 466288946 466287034 0.000000e+00 2987
9 TraesCS1D01G251900 chr1B 87.796 2024 199 27 757 2767 465964403 465966391 0.000000e+00 2326
10 TraesCS1D01G251900 chr1B 89.069 741 69 8 1 729 466289685 466288945 0.000000e+00 909
11 TraesCS1D01G251900 chr7D 82.178 1717 279 22 1046 2742 84422149 84420440 0.000000e+00 1450
12 TraesCS1D01G251900 chr7D 81.546 1734 294 20 1029 2743 193935024 193936750 0.000000e+00 1406
13 TraesCS1D01G251900 chr7D 87.347 735 74 13 2 720 39132608 39131877 0.000000e+00 824
14 TraesCS1D01G251900 chr7D 94.903 412 15 5 2773 3180 63450701 63450292 1.140000e-179 640
15 TraesCS1D01G251900 chr5A 82.035 1720 279 26 1029 2730 538349074 538350781 0.000000e+00 1437
16 TraesCS1D01G251900 chr5A 80.928 1767 306 25 1022 2768 138430567 138428812 0.000000e+00 1367
17 TraesCS1D01G251900 chr5A 95.377 411 14 5 2773 3180 12225028 12224620 0.000000e+00 649
18 TraesCS1D01G251900 chr5A 93.897 426 19 6 2759 3181 546708142 546707721 1.470000e-178 636
19 TraesCS1D01G251900 chr5A 84.674 261 36 3 3193 3451 11752151 11751893 1.340000e-64 257
20 TraesCS1D01G251900 chrUn 81.882 1722 278 27 1046 2741 82637376 82635663 0.000000e+00 1421
21 TraesCS1D01G251900 chr7A 81.882 1722 278 27 1046 2741 85724260 85725973 0.000000e+00 1421
22 TraesCS1D01G251900 chr7A 81.557 1708 293 16 1053 2743 203525556 203527258 0.000000e+00 1389
23 TraesCS1D01G251900 chr7A 80.783 1098 192 15 1686 2769 612532263 612531171 0.000000e+00 841
24 TraesCS1D01G251900 chr7A 93.850 439 15 9 2755 3188 225637376 225637807 0.000000e+00 651
25 TraesCS1D01G251900 chr7A 95.181 415 11 6 2772 3179 640496592 640497004 0.000000e+00 647
26 TraesCS1D01G251900 chr7B 81.650 1733 294 18 1029 2743 157687796 157689522 0.000000e+00 1417
27 TraesCS1D01G251900 chr7B 94.068 118 7 0 3644 3761 8897774 8897657 2.980000e-41 180
28 TraesCS1D01G251900 chr7B 92.241 116 7 2 3453 3567 11331988 11332102 3.010000e-36 163
29 TraesCS1D01G251900 chr7B 91.964 112 7 2 3453 3563 11326768 11326878 5.030000e-34 156
30 TraesCS1D01G251900 chr7B 88.793 116 7 5 3453 3567 572592207 572592097 1.820000e-28 137
31 TraesCS1D01G251900 chr5B 81.001 1758 306 23 1030 2768 137112709 137110961 0.000000e+00 1371
32 TraesCS1D01G251900 chr5B 88.556 734 62 15 1 721 488118337 488119061 0.000000e+00 870
33 TraesCS1D01G251900 chr5B 80.428 654 122 3 2121 2768 137109966 137109313 9.380000e-136 494
34 TraesCS1D01G251900 chr2A 80.406 1725 296 26 1062 2766 74253730 74252028 0.000000e+00 1275
35 TraesCS1D01G251900 chr2A 88.692 734 70 4 1 721 199711515 199712248 0.000000e+00 883
36 TraesCS1D01G251900 chr2A 96.368 413 10 5 2772 3180 61475557 61475968 0.000000e+00 675
37 TraesCS1D01G251900 chr5D 89.646 734 60 12 1 721 407010136 407009406 0.000000e+00 920
38 TraesCS1D01G251900 chr5D 87.967 723 82 3 1 719 448080586 448079865 0.000000e+00 848
39 TraesCS1D01G251900 chr4D 88.813 733 68 12 1 721 348294028 348294758 0.000000e+00 887
40 TraesCS1D01G251900 chr4D 86.927 742 69 12 1 721 253774888 253775622 0.000000e+00 808
41 TraesCS1D01G251900 chr4D 95.610 410 14 3 2772 3180 495973346 495973752 0.000000e+00 654
42 TraesCS1D01G251900 chr2D 88.919 731 65 12 1 721 605630712 605629988 0.000000e+00 887
43 TraesCS1D01G251900 chr2D 87.908 736 69 13 1 721 364972749 364972019 0.000000e+00 848
44 TraesCS1D01G251900 chr2B 87.962 731 74 7 1 721 554451462 554452188 0.000000e+00 850
45 TraesCS1D01G251900 chr2B 94.581 203 11 0 3559 3761 118004835 118005037 7.840000e-82 315
46 TraesCS1D01G251900 chr2B 86.434 258 30 4 3195 3451 671394314 671394567 1.030000e-70 278
47 TraesCS1D01G251900 chr2B 84.496 258 33 5 3195 3451 381635888 381636139 8.070000e-62 248
48 TraesCS1D01G251900 chr3B 86.164 730 78 6 3 719 50041200 50040481 0.000000e+00 767
49 TraesCS1D01G251900 chr3D 96.117 412 12 3 2772 3179 3101957 3102368 0.000000e+00 669
50 TraesCS1D01G251900 chr3D 86.322 329 25 6 1 320 29339870 29339553 1.290000e-89 340
51 TraesCS1D01G251900 chr3D 86.923 260 30 3 3193 3451 603679268 603679012 4.750000e-74 289
52 TraesCS1D01G251900 chr3D 91.748 206 17 0 3556 3761 157441647 157441442 1.710000e-73 287
53 TraesCS1D01G251900 chr6A 95.620 411 13 5 2773 3179 574237296 574236887 0.000000e+00 654
54 TraesCS1D01G251900 chr6B 86.100 259 30 4 3195 3451 45733100 45733354 1.330000e-69 274
55 TraesCS1D01G251900 chr6B 86.047 258 31 4 3195 3451 647351270 647351017 4.790000e-69 272
56 TraesCS1D01G251900 chr4B 85.714 259 31 4 3195 3451 28277579 28277833 6.190000e-68 268
57 TraesCS1D01G251900 chr4B 85.328 259 32 4 3195 3451 167386705 167386959 2.880000e-66 263


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G251900 chr1D 344283114 344286874 3760 False 6946.0 6946 100.0000 1 3761 1 chr1D.!!$F1 3760
1 TraesCS1D01G251900 chr1D 344674467 344676327 1860 True 2381.0 2381 89.8770 919 2770 1 chr1D.!!$R1 1851
2 TraesCS1D01G251900 chr1D 487540595 487541291 696 False 660.0 660 83.9830 1 707 1 chr1D.!!$F2 706
3 TraesCS1D01G251900 chr1A 444420009 444421849 1840 True 2320.0 2320 89.4030 921 2773 1 chr1A.!!$R1 1852
4 TraesCS1D01G251900 chr1A 443869525 443872048 2523 False 2098.5 3842 96.3385 470 3453 2 chr1A.!!$F2 2983
5 TraesCS1D01G251900 chr1A 585580599 585581298 699 False 612.0 612 82.8020 1 707 1 chr1A.!!$F1 706
6 TraesCS1D01G251900 chr1B 465964403 465966391 1988 False 2326.0 2326 87.7960 757 2767 1 chr1B.!!$F1 2010
7 TraesCS1D01G251900 chr1B 466287034 466289685 2651 True 1948.0 2987 91.8275 1 2772 2 chr1B.!!$R1 2771
8 TraesCS1D01G251900 chr7D 84420440 84422149 1709 True 1450.0 1450 82.1780 1046 2742 1 chr7D.!!$R3 1696
9 TraesCS1D01G251900 chr7D 193935024 193936750 1726 False 1406.0 1406 81.5460 1029 2743 1 chr7D.!!$F1 1714
10 TraesCS1D01G251900 chr7D 39131877 39132608 731 True 824.0 824 87.3470 2 720 1 chr7D.!!$R1 718
11 TraesCS1D01G251900 chr5A 538349074 538350781 1707 False 1437.0 1437 82.0350 1029 2730 1 chr5A.!!$F1 1701
12 TraesCS1D01G251900 chr5A 138428812 138430567 1755 True 1367.0 1367 80.9280 1022 2768 1 chr5A.!!$R3 1746
13 TraesCS1D01G251900 chrUn 82635663 82637376 1713 True 1421.0 1421 81.8820 1046 2741 1 chrUn.!!$R1 1695
14 TraesCS1D01G251900 chr7A 85724260 85725973 1713 False 1421.0 1421 81.8820 1046 2741 1 chr7A.!!$F1 1695
15 TraesCS1D01G251900 chr7A 203525556 203527258 1702 False 1389.0 1389 81.5570 1053 2743 1 chr7A.!!$F2 1690
16 TraesCS1D01G251900 chr7A 612531171 612532263 1092 True 841.0 841 80.7830 1686 2769 1 chr7A.!!$R1 1083
17 TraesCS1D01G251900 chr7B 157687796 157689522 1726 False 1417.0 1417 81.6500 1029 2743 1 chr7B.!!$F3 1714
18 TraesCS1D01G251900 chr5B 137109313 137112709 3396 True 932.5 1371 80.7145 1030 2768 2 chr5B.!!$R1 1738
19 TraesCS1D01G251900 chr5B 488118337 488119061 724 False 870.0 870 88.5560 1 721 1 chr5B.!!$F1 720
20 TraesCS1D01G251900 chr2A 74252028 74253730 1702 True 1275.0 1275 80.4060 1062 2766 1 chr2A.!!$R1 1704
21 TraesCS1D01G251900 chr2A 199711515 199712248 733 False 883.0 883 88.6920 1 721 1 chr2A.!!$F2 720
22 TraesCS1D01G251900 chr5D 407009406 407010136 730 True 920.0 920 89.6460 1 721 1 chr5D.!!$R1 720
23 TraesCS1D01G251900 chr5D 448079865 448080586 721 True 848.0 848 87.9670 1 719 1 chr5D.!!$R2 718
24 TraesCS1D01G251900 chr4D 348294028 348294758 730 False 887.0 887 88.8130 1 721 1 chr4D.!!$F2 720
25 TraesCS1D01G251900 chr4D 253774888 253775622 734 False 808.0 808 86.9270 1 721 1 chr4D.!!$F1 720
26 TraesCS1D01G251900 chr2D 605629988 605630712 724 True 887.0 887 88.9190 1 721 1 chr2D.!!$R2 720
27 TraesCS1D01G251900 chr2D 364972019 364972749 730 True 848.0 848 87.9080 1 721 1 chr2D.!!$R1 720
28 TraesCS1D01G251900 chr2B 554451462 554452188 726 False 850.0 850 87.9620 1 721 1 chr2B.!!$F3 720
29 TraesCS1D01G251900 chr3B 50040481 50041200 719 True 767.0 767 86.1640 3 719 1 chr3B.!!$R1 716

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
796 845 0.104855 GCACATGAGGAGCACGGATA 59.895 55.0 0.0 0.0 0.0 2.59 F
1005 1069 0.452184 TCGAGAAGTCAGCGATGTCC 59.548 55.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2703 4440 1.128809 TGTAAACCTTCCCTGGCCGA 61.129 55.000 0.00 0.00 0.00 5.54 R
2786 4523 2.290323 GGGTGCATATGTCCCATAGACC 60.290 54.545 23.76 11.09 45.68 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 3.282021 GCTTCCCATAGATGCTTGACAA 58.718 45.455 0.00 0.00 41.35 3.18
85 95 7.065563 GCTTCCCATAGATGCTTGACAATATAG 59.934 40.741 0.00 0.00 41.35 1.31
486 504 0.911769 TTCTGCAATCTCGATGGGGT 59.088 50.000 0.00 0.00 0.00 4.95
509 532 4.913335 TCGTTCGGTATCTTGCTAGAAT 57.087 40.909 0.99 0.00 33.20 2.40
732 781 4.574421 ACATGCAGCTGCGTATAACAATAA 59.426 37.500 31.98 11.26 45.83 1.40
796 845 0.104855 GCACATGAGGAGCACGGATA 59.895 55.000 0.00 0.00 0.00 2.59
1005 1069 0.452184 TCGAGAAGTCAGCGATGTCC 59.548 55.000 0.00 0.00 0.00 4.02
1078 1142 0.757188 CGTAGGGATCCTGCTCCAGT 60.757 60.000 12.58 0.00 37.01 4.00
2132 2214 0.472543 ATCGATGGCCCAGAGGATGA 60.473 55.000 0.00 0.00 33.47 2.92
2262 2344 2.890766 GCTCCGGGACCTCAAACCA 61.891 63.158 0.00 0.00 0.00 3.67
2384 2473 0.613260 ATCTTCTACCGCAGCCACAA 59.387 50.000 0.00 0.00 0.00 3.33
2388 2477 2.048597 TACCGCAGCCACAACGAG 60.049 61.111 0.00 0.00 0.00 4.18
2703 4440 1.270907 CAGAGCAGGGGTACTTCTGT 58.729 55.000 14.25 5.08 33.69 3.41
2773 4510 3.600388 GATTATTAGGGATGACGGCAGG 58.400 50.000 0.00 0.00 0.00 4.85
2775 4512 1.051812 ATTAGGGATGACGGCAGGAG 58.948 55.000 0.00 0.00 0.00 3.69
2776 4513 1.048724 TTAGGGATGACGGCAGGAGG 61.049 60.000 0.00 0.00 0.00 4.30
2777 4514 2.946988 TAGGGATGACGGCAGGAGGG 62.947 65.000 0.00 0.00 0.00 4.30
2778 4515 2.764128 GGATGACGGCAGGAGGGA 60.764 66.667 0.00 0.00 0.00 4.20
2779 4516 2.367202 GGATGACGGCAGGAGGGAA 61.367 63.158 0.00 0.00 0.00 3.97
2780 4517 1.602237 GATGACGGCAGGAGGGAAA 59.398 57.895 0.00 0.00 0.00 3.13
2781 4518 0.744771 GATGACGGCAGGAGGGAAAC 60.745 60.000 0.00 0.00 0.00 2.78
2782 4519 1.201429 ATGACGGCAGGAGGGAAACT 61.201 55.000 0.00 0.00 0.00 2.66
2783 4520 1.375326 GACGGCAGGAGGGAAACTT 59.625 57.895 0.00 0.00 0.00 2.66
2784 4521 0.250770 GACGGCAGGAGGGAAACTTT 60.251 55.000 0.00 0.00 0.00 2.66
2785 4522 0.185175 ACGGCAGGAGGGAAACTTTT 59.815 50.000 0.00 0.00 0.00 2.27
2786 4523 0.598065 CGGCAGGAGGGAAACTTTTG 59.402 55.000 0.00 0.00 0.00 2.44
2787 4524 0.969149 GGCAGGAGGGAAACTTTTGG 59.031 55.000 0.00 0.00 0.00 3.28
2788 4525 1.704641 GCAGGAGGGAAACTTTTGGT 58.295 50.000 0.00 0.00 0.00 3.67
2789 4526 1.613925 GCAGGAGGGAAACTTTTGGTC 59.386 52.381 0.00 0.00 0.00 4.02
2790 4527 2.753168 GCAGGAGGGAAACTTTTGGTCT 60.753 50.000 0.00 0.00 0.00 3.85
2791 4528 3.497942 GCAGGAGGGAAACTTTTGGTCTA 60.498 47.826 0.00 0.00 0.00 2.59
2792 4529 4.811063 GCAGGAGGGAAACTTTTGGTCTAT 60.811 45.833 0.00 0.00 0.00 1.98
2793 4530 4.702131 CAGGAGGGAAACTTTTGGTCTATG 59.298 45.833 0.00 0.00 0.00 2.23
2794 4531 4.017126 GGAGGGAAACTTTTGGTCTATGG 58.983 47.826 0.00 0.00 0.00 2.74
2795 4532 4.017126 GAGGGAAACTTTTGGTCTATGGG 58.983 47.826 0.00 0.00 0.00 4.00
2796 4533 3.660669 AGGGAAACTTTTGGTCTATGGGA 59.339 43.478 0.00 0.00 0.00 4.37
2797 4534 3.762288 GGGAAACTTTTGGTCTATGGGAC 59.238 47.826 0.00 0.00 43.79 4.46
2798 4535 4.403734 GGAAACTTTTGGTCTATGGGACA 58.596 43.478 0.00 0.00 46.16 4.02
2813 4550 4.842531 TGGGACATATGCACCCTATATG 57.157 45.455 27.67 6.78 43.59 1.78
2814 4551 3.523157 TGGGACATATGCACCCTATATGG 59.477 47.826 27.67 0.00 43.59 2.74
2856 4593 8.839310 TTCAACAAAAAGTCAAAAATTCCTGA 57.161 26.923 0.00 0.00 0.00 3.86
2857 4594 8.839310 TCAACAAAAAGTCAAAAATTCCTGAA 57.161 26.923 0.00 0.00 0.00 3.02
2858 4595 9.277783 TCAACAAAAAGTCAAAAATTCCTGAAA 57.722 25.926 0.00 0.00 0.00 2.69
2859 4596 9.890352 CAACAAAAAGTCAAAAATTCCTGAAAA 57.110 25.926 0.00 0.00 0.00 2.29
2895 4632 8.928270 ATAAACTTGACCTTCTATTGTACTCG 57.072 34.615 0.00 0.00 0.00 4.18
2896 4633 5.979288 ACTTGACCTTCTATTGTACTCGT 57.021 39.130 0.00 0.00 0.00 4.18
2897 4634 5.710984 ACTTGACCTTCTATTGTACTCGTG 58.289 41.667 0.00 0.00 0.00 4.35
2898 4635 5.475909 ACTTGACCTTCTATTGTACTCGTGA 59.524 40.000 0.00 0.00 0.00 4.35
2899 4636 5.562506 TGACCTTCTATTGTACTCGTGAG 57.437 43.478 0.00 0.00 0.00 3.51
2900 4637 5.250982 TGACCTTCTATTGTACTCGTGAGA 58.749 41.667 3.44 0.00 39.12 3.27
2901 4638 5.708697 TGACCTTCTATTGTACTCGTGAGAA 59.291 40.000 3.44 0.00 41.32 2.87
2902 4639 6.208007 TGACCTTCTATTGTACTCGTGAGAAA 59.792 38.462 3.44 0.00 41.32 2.52
2903 4640 7.093902 TGACCTTCTATTGTACTCGTGAGAAAT 60.094 37.037 3.44 3.72 41.32 2.17
2904 4641 8.289939 ACCTTCTATTGTACTCGTGAGAAATA 57.710 34.615 3.44 4.58 41.32 1.40
2905 4642 8.746530 ACCTTCTATTGTACTCGTGAGAAATAA 58.253 33.333 3.44 0.00 41.32 1.40
2906 4643 9.582431 CCTTCTATTGTACTCGTGAGAAATAAA 57.418 33.333 3.44 3.23 41.32 1.40
2911 4648 8.786826 ATTGTACTCGTGAGAAATAAAATCCA 57.213 30.769 3.44 0.00 41.32 3.41
2912 4649 8.610248 TTGTACTCGTGAGAAATAAAATCCAA 57.390 30.769 3.44 0.00 41.32 3.53
2913 4650 8.610248 TGTACTCGTGAGAAATAAAATCCAAA 57.390 30.769 3.44 0.00 41.32 3.28
2914 4651 9.058174 TGTACTCGTGAGAAATAAAATCCAAAA 57.942 29.630 3.44 0.00 41.32 2.44
2915 4652 9.887406 GTACTCGTGAGAAATAAAATCCAAAAA 57.113 29.630 3.44 0.00 41.32 1.94
2972 4709 9.255304 GACAAATTTTTGGCTAAAATAGTGTGA 57.745 29.630 25.81 0.92 43.84 3.58
2973 4710 9.606631 ACAAATTTTTGGCTAAAATAGTGTGAA 57.393 25.926 22.86 0.00 43.84 3.18
2978 4715 9.906660 TTTTTGGCTAAAATAGTGTGAATAGTG 57.093 29.630 8.93 0.00 35.82 2.74
2979 4716 8.856153 TTTGGCTAAAATAGTGTGAATAGTGA 57.144 30.769 0.00 0.00 0.00 3.41
2980 4717 7.843490 TGGCTAAAATAGTGTGAATAGTGAC 57.157 36.000 0.00 0.00 0.00 3.67
2981 4718 6.821665 TGGCTAAAATAGTGTGAATAGTGACC 59.178 38.462 0.00 0.00 0.00 4.02
2982 4719 6.018994 GGCTAAAATAGTGTGAATAGTGACCG 60.019 42.308 0.00 0.00 0.00 4.79
2983 4720 6.755141 GCTAAAATAGTGTGAATAGTGACCGA 59.245 38.462 0.00 0.00 0.00 4.69
2984 4721 7.438459 GCTAAAATAGTGTGAATAGTGACCGAT 59.562 37.037 0.00 0.00 0.00 4.18
2985 4722 9.961265 CTAAAATAGTGTGAATAGTGACCGATA 57.039 33.333 0.00 0.00 0.00 2.92
2987 4724 9.832445 AAAATAGTGTGAATAGTGACCGATAAT 57.168 29.630 0.00 0.00 0.00 1.28
2990 4727 6.448006 AGTGTGAATAGTGACCGATAATAGC 58.552 40.000 0.00 0.00 0.00 2.97
2991 4728 6.040504 AGTGTGAATAGTGACCGATAATAGCA 59.959 38.462 0.00 0.00 0.00 3.49
2992 4729 6.700081 GTGTGAATAGTGACCGATAATAGCAA 59.300 38.462 0.00 0.00 0.00 3.91
2993 4730 7.223971 GTGTGAATAGTGACCGATAATAGCAAA 59.776 37.037 0.00 0.00 0.00 3.68
2994 4731 7.931407 TGTGAATAGTGACCGATAATAGCAAAT 59.069 33.333 0.00 0.00 0.00 2.32
2995 4732 9.419297 GTGAATAGTGACCGATAATAGCAAATA 57.581 33.333 0.00 0.00 0.00 1.40
2996 4733 9.990360 TGAATAGTGACCGATAATAGCAAATAA 57.010 29.630 0.00 0.00 0.00 1.40
3027 4764 4.799564 TTTTTGCTGTGAGGTCAACTTT 57.200 36.364 0.00 0.00 0.00 2.66
3028 4765 4.799564 TTTTGCTGTGAGGTCAACTTTT 57.200 36.364 0.00 0.00 0.00 2.27
3029 4766 3.781079 TTGCTGTGAGGTCAACTTTTG 57.219 42.857 0.00 0.00 0.00 2.44
3030 4767 2.722094 TGCTGTGAGGTCAACTTTTGT 58.278 42.857 0.00 0.00 0.00 2.83
3031 4768 3.088532 TGCTGTGAGGTCAACTTTTGTT 58.911 40.909 0.00 0.00 44.66 2.83
3032 4769 3.509575 TGCTGTGAGGTCAACTTTTGTTT 59.490 39.130 0.00 0.00 41.35 2.83
3033 4770 4.021544 TGCTGTGAGGTCAACTTTTGTTTT 60.022 37.500 0.00 0.00 41.35 2.43
3034 4771 4.929211 GCTGTGAGGTCAACTTTTGTTTTT 59.071 37.500 0.00 0.00 41.35 1.94
3060 4797 7.562640 TTCGTCGACATTTATATATCAGTGC 57.437 36.000 17.16 0.00 0.00 4.40
3061 4798 6.674066 TCGTCGACATTTATATATCAGTGCA 58.326 36.000 17.16 0.00 0.00 4.57
3062 4799 7.142680 TCGTCGACATTTATATATCAGTGCAA 58.857 34.615 17.16 0.00 0.00 4.08
3063 4800 7.650104 TCGTCGACATTTATATATCAGTGCAAA 59.350 33.333 17.16 0.00 0.00 3.68
3064 4801 8.272866 CGTCGACATTTATATATCAGTGCAAAA 58.727 33.333 17.16 0.00 0.00 2.44
3065 4802 9.586150 GTCGACATTTATATATCAGTGCAAAAG 57.414 33.333 11.55 0.00 0.00 2.27
3066 4803 9.325198 TCGACATTTATATATCAGTGCAAAAGT 57.675 29.630 0.00 0.00 0.00 2.66
3075 4812 7.986085 ATATCAGTGCAAAAGTAAGTCAAGT 57.014 32.000 0.00 0.00 0.00 3.16
3076 4813 5.484173 TCAGTGCAAAAGTAAGTCAAGTG 57.516 39.130 0.00 0.00 0.00 3.16
3077 4814 4.941263 TCAGTGCAAAAGTAAGTCAAGTGT 59.059 37.500 0.00 0.00 0.00 3.55
3078 4815 5.414454 TCAGTGCAAAAGTAAGTCAAGTGTT 59.586 36.000 0.00 0.00 0.00 3.32
3079 4816 6.072175 TCAGTGCAAAAGTAAGTCAAGTGTTT 60.072 34.615 0.00 0.00 0.00 2.83
3080 4817 6.586082 CAGTGCAAAAGTAAGTCAAGTGTTTT 59.414 34.615 0.00 0.00 0.00 2.43
3081 4818 6.586082 AGTGCAAAAGTAAGTCAAGTGTTTTG 59.414 34.615 0.00 0.00 37.74 2.44
3082 4819 6.364976 GTGCAAAAGTAAGTCAAGTGTTTTGT 59.635 34.615 0.00 0.00 37.26 2.83
3083 4820 6.584563 TGCAAAAGTAAGTCAAGTGTTTTGTC 59.415 34.615 0.00 0.00 37.26 3.18
3084 4821 6.584563 GCAAAAGTAAGTCAAGTGTTTTGTCA 59.415 34.615 0.00 0.00 37.26 3.58
3085 4822 7.115663 GCAAAAGTAAGTCAAGTGTTTTGTCAA 59.884 33.333 0.00 0.00 37.26 3.18
3086 4823 8.973378 CAAAAGTAAGTCAAGTGTTTTGTCAAA 58.027 29.630 0.00 0.00 32.65 2.69
3087 4824 9.535878 AAAAGTAAGTCAAGTGTTTTGTCAAAA 57.464 25.926 6.65 6.65 0.00 2.44
3088 4825 9.705290 AAAGTAAGTCAAGTGTTTTGTCAAAAT 57.295 25.926 13.65 0.00 32.22 1.82
3091 4828 9.783256 GTAAGTCAAGTGTTTTGTCAAAATAGT 57.217 29.630 13.65 11.04 32.22 2.12
3093 4830 8.911247 AGTCAAGTGTTTTGTCAAAATAGTTC 57.089 30.769 19.36 12.43 34.29 3.01
3094 4831 8.739972 AGTCAAGTGTTTTGTCAAAATAGTTCT 58.260 29.630 19.36 13.92 34.29 3.01
3095 4832 9.353999 GTCAAGTGTTTTGTCAAAATAGTTCTT 57.646 29.630 19.36 11.77 34.29 2.52
3098 4835 9.797556 AAGTGTTTTGTCAAAATAGTTCTTACC 57.202 29.630 17.46 2.76 31.98 2.85
3099 4836 9.185680 AGTGTTTTGTCAAAATAGTTCTTACCT 57.814 29.630 13.65 0.34 32.22 3.08
3153 4890 9.646522 AAAAATCCCCATATAGGATGCATATAC 57.353 33.333 0.00 0.00 43.54 1.47
3154 4891 7.952847 AATCCCCATATAGGATGCATATACA 57.047 36.000 0.00 0.00 43.54 2.29
3155 4892 7.952847 ATCCCCATATAGGATGCATATACAA 57.047 36.000 0.00 0.00 42.69 2.41
3156 4893 7.136822 TCCCCATATAGGATGCATATACAAC 57.863 40.000 0.00 0.00 41.22 3.32
3157 4894 6.908593 TCCCCATATAGGATGCATATACAACT 59.091 38.462 0.00 0.00 41.22 3.16
3158 4895 8.071229 TCCCCATATAGGATGCATATACAACTA 58.929 37.037 0.00 0.00 41.22 2.24
3159 4896 8.370940 CCCCATATAGGATGCATATACAACTAG 58.629 40.741 0.00 0.00 41.22 2.57
3160 4897 8.370940 CCCATATAGGATGCATATACAACTAGG 58.629 40.741 0.00 0.00 41.22 3.02
3161 4898 9.147732 CCATATAGGATGCATATACAACTAGGA 57.852 37.037 0.00 0.00 41.22 2.94
3164 4901 6.115448 AGGATGCATATACAACTAGGAACC 57.885 41.667 0.00 0.00 0.00 3.62
3165 4902 5.606749 AGGATGCATATACAACTAGGAACCA 59.393 40.000 0.00 0.00 0.00 3.67
3166 4903 6.101150 AGGATGCATATACAACTAGGAACCAA 59.899 38.462 0.00 0.00 0.00 3.67
3167 4904 6.770785 GGATGCATATACAACTAGGAACCAAA 59.229 38.462 0.00 0.00 0.00 3.28
3168 4905 7.041098 GGATGCATATACAACTAGGAACCAAAG 60.041 40.741 0.00 0.00 0.00 2.77
3169 4906 6.717289 TGCATATACAACTAGGAACCAAAGT 58.283 36.000 0.00 0.00 0.00 2.66
3170 4907 6.597672 TGCATATACAACTAGGAACCAAAGTG 59.402 38.462 0.00 0.00 0.00 3.16
3171 4908 6.598064 GCATATACAACTAGGAACCAAAGTGT 59.402 38.462 0.00 0.00 0.00 3.55
3172 4909 7.767198 GCATATACAACTAGGAACCAAAGTGTA 59.233 37.037 0.00 0.00 0.00 2.90
3173 4910 9.832445 CATATACAACTAGGAACCAAAGTGTAT 57.168 33.333 0.00 15.75 0.00 2.29
3176 4913 7.506328 ACAACTAGGAACCAAAGTGTATTTC 57.494 36.000 0.00 0.00 0.00 2.17
3177 4914 6.489022 ACAACTAGGAACCAAAGTGTATTTCC 59.511 38.462 0.00 0.00 36.71 3.13
3178 4915 5.567430 ACTAGGAACCAAAGTGTATTTCCC 58.433 41.667 0.00 0.00 37.09 3.97
3179 4916 3.418047 AGGAACCAAAGTGTATTTCCCG 58.582 45.455 0.00 0.00 37.09 5.14
3180 4917 3.073356 AGGAACCAAAGTGTATTTCCCGA 59.927 43.478 0.00 0.00 37.09 5.14
3181 4918 4.014406 GGAACCAAAGTGTATTTCCCGAT 58.986 43.478 0.00 0.00 31.19 4.18
3182 4919 4.142469 GGAACCAAAGTGTATTTCCCGATG 60.142 45.833 0.00 0.00 31.19 3.84
3183 4920 4.295141 ACCAAAGTGTATTTCCCGATGA 57.705 40.909 0.00 0.00 0.00 2.92
3184 4921 4.007659 ACCAAAGTGTATTTCCCGATGAC 58.992 43.478 0.00 0.00 0.00 3.06
3185 4922 3.063452 CCAAAGTGTATTTCCCGATGACG 59.937 47.826 0.00 0.00 39.43 4.35
3195 4932 3.168271 CGATGACGGCACCACTTG 58.832 61.111 0.00 0.00 35.72 3.16
3196 4933 1.667830 CGATGACGGCACCACTTGT 60.668 57.895 0.00 0.00 35.72 3.16
3197 4934 1.227999 CGATGACGGCACCACTTGTT 61.228 55.000 0.00 0.00 35.72 2.83
3198 4935 0.238289 GATGACGGCACCACTTGTTG 59.762 55.000 0.00 0.00 0.00 3.33
3199 4936 0.179032 ATGACGGCACCACTTGTTGA 60.179 50.000 0.00 0.00 0.00 3.18
3200 4937 0.393132 TGACGGCACCACTTGTTGAA 60.393 50.000 0.00 0.00 0.00 2.69
3201 4938 0.028902 GACGGCACCACTTGTTGAAC 59.971 55.000 0.00 0.00 0.00 3.18
3202 4939 0.393808 ACGGCACCACTTGTTGAACT 60.394 50.000 0.00 0.00 0.00 3.01
3203 4940 0.738389 CGGCACCACTTGTTGAACTT 59.262 50.000 0.00 0.00 0.00 2.66
3204 4941 1.533756 CGGCACCACTTGTTGAACTTG 60.534 52.381 0.00 0.00 0.00 3.16
3205 4942 1.476488 GGCACCACTTGTTGAACTTGT 59.524 47.619 0.00 0.00 0.00 3.16
3206 4943 2.685897 GGCACCACTTGTTGAACTTGTA 59.314 45.455 0.00 0.00 0.00 2.41
3207 4944 3.488553 GGCACCACTTGTTGAACTTGTAC 60.489 47.826 0.00 0.00 0.00 2.90
3208 4945 3.377172 GCACCACTTGTTGAACTTGTACT 59.623 43.478 0.00 0.00 0.00 2.73
3209 4946 4.142469 GCACCACTTGTTGAACTTGTACTT 60.142 41.667 0.00 0.00 0.00 2.24
3210 4947 5.569413 CACCACTTGTTGAACTTGTACTTC 58.431 41.667 0.00 0.00 0.00 3.01
3211 4948 4.638865 ACCACTTGTTGAACTTGTACTTCC 59.361 41.667 0.00 0.00 0.00 3.46
3212 4949 4.881850 CCACTTGTTGAACTTGTACTTCCT 59.118 41.667 0.00 0.00 0.00 3.36
3213 4950 6.053005 CCACTTGTTGAACTTGTACTTCCTA 58.947 40.000 0.00 0.00 0.00 2.94
3214 4951 6.202954 CCACTTGTTGAACTTGTACTTCCTAG 59.797 42.308 0.00 0.00 0.00 3.02
3215 4952 5.758784 ACTTGTTGAACTTGTACTTCCTAGC 59.241 40.000 0.00 0.00 0.00 3.42
3216 4953 5.546621 TGTTGAACTTGTACTTCCTAGCT 57.453 39.130 0.00 0.00 0.00 3.32
3217 4954 5.539048 TGTTGAACTTGTACTTCCTAGCTC 58.461 41.667 0.00 0.00 0.00 4.09
3218 4955 4.436242 TGAACTTGTACTTCCTAGCTCG 57.564 45.455 0.00 0.00 0.00 5.03
3219 4956 3.192844 TGAACTTGTACTTCCTAGCTCGG 59.807 47.826 0.00 0.00 0.00 4.63
3220 4957 2.805194 ACTTGTACTTCCTAGCTCGGT 58.195 47.619 3.89 0.00 0.00 4.69
3221 4958 3.163467 ACTTGTACTTCCTAGCTCGGTT 58.837 45.455 3.89 0.00 0.00 4.44
3222 4959 3.577415 ACTTGTACTTCCTAGCTCGGTTT 59.423 43.478 3.89 0.00 0.00 3.27
3223 4960 4.768968 ACTTGTACTTCCTAGCTCGGTTTA 59.231 41.667 3.89 0.00 0.00 2.01
3224 4961 4.978083 TGTACTTCCTAGCTCGGTTTAG 57.022 45.455 3.89 3.65 0.00 1.85
3225 4962 4.338879 TGTACTTCCTAGCTCGGTTTAGT 58.661 43.478 3.89 8.91 0.00 2.24
3226 4963 5.500234 TGTACTTCCTAGCTCGGTTTAGTA 58.500 41.667 3.89 8.04 0.00 1.82
3227 4964 5.587844 TGTACTTCCTAGCTCGGTTTAGTAG 59.412 44.000 3.89 0.00 0.00 2.57
3228 4965 3.380954 ACTTCCTAGCTCGGTTTAGTAGC 59.619 47.826 3.89 0.00 36.48 3.58
3230 4967 4.428294 TCCTAGCTCGGTTTAGTAGCTA 57.572 45.455 3.89 0.00 44.55 3.32
3233 4970 2.657143 AGCTCGGTTTAGTAGCTAGCT 58.343 47.619 23.12 23.12 45.35 3.32
3234 4971 3.439895 GCTCGGTTTAGTAGCTAGCTT 57.560 47.619 24.88 8.55 39.29 3.74
3267 5004 3.120130 TCAGTTAGCAAAATAAACGGCCG 60.120 43.478 26.86 26.86 0.00 6.13
3274 5011 2.691984 AAATAAACGGCCGTGTCAAC 57.308 45.000 34.95 0.00 0.00 3.18
3284 5021 1.641140 CGTGTCAACGTGTGCATGT 59.359 52.632 0.00 0.00 44.93 3.21
3287 5024 1.595328 GTGTCAACGTGTGCATGTACA 59.405 47.619 13.02 13.02 0.00 2.90
3351 5088 1.083489 GTGCGGCAGTTAGTAATGCA 58.917 50.000 1.18 0.00 44.37 3.96
3359 5096 4.455877 GGCAGTTAGTAATGCATGGGATAC 59.544 45.833 0.00 0.00 44.37 2.24
3373 5110 1.226686 GGATACCATGCAGAGCAGCG 61.227 60.000 0.00 0.00 43.65 5.18
3376 5113 4.175489 CCATGCAGAGCAGCGCAC 62.175 66.667 11.47 0.00 43.65 5.34
3453 5190 0.725784 GCGTGCGTGGTTGATCTTTG 60.726 55.000 0.00 0.00 0.00 2.77
3454 5191 0.725784 CGTGCGTGGTTGATCTTTGC 60.726 55.000 0.00 0.00 0.00 3.68
3455 5192 0.310543 GTGCGTGGTTGATCTTTGCA 59.689 50.000 0.00 0.00 0.00 4.08
3456 5193 1.028130 TGCGTGGTTGATCTTTGCAA 58.972 45.000 0.00 0.00 0.00 4.08
3457 5194 1.268999 TGCGTGGTTGATCTTTGCAAC 60.269 47.619 0.00 0.00 43.64 4.17
3458 5195 1.673760 CGTGGTTGATCTTTGCAACG 58.326 50.000 0.00 0.00 44.92 4.10
3459 5196 1.262950 CGTGGTTGATCTTTGCAACGA 59.737 47.619 8.20 8.20 44.92 3.85
3460 5197 2.650608 GTGGTTGATCTTTGCAACGAC 58.349 47.619 7.91 2.29 44.92 4.34
3461 5198 1.606668 TGGTTGATCTTTGCAACGACC 59.393 47.619 7.91 11.87 44.92 4.79
3462 5199 1.880027 GGTTGATCTTTGCAACGACCT 59.120 47.619 7.91 0.00 44.92 3.85
3463 5200 2.350772 GGTTGATCTTTGCAACGACCTG 60.351 50.000 7.91 0.00 44.92 4.00
3464 5201 1.522668 TGATCTTTGCAACGACCTGG 58.477 50.000 7.91 0.00 0.00 4.45
3465 5202 0.169009 GATCTTTGCAACGACCTGGC 59.831 55.000 7.91 0.00 0.00 4.85
3466 5203 0.250901 ATCTTTGCAACGACCTGGCT 60.251 50.000 7.91 0.00 0.00 4.75
3467 5204 0.465460 TCTTTGCAACGACCTGGCTT 60.465 50.000 0.00 0.00 0.00 4.35
3468 5205 0.040067 CTTTGCAACGACCTGGCTTC 60.040 55.000 0.00 0.00 0.00 3.86
3469 5206 1.781025 TTTGCAACGACCTGGCTTCG 61.781 55.000 0.00 5.28 42.36 3.79
3470 5207 4.090057 GCAACGACCTGGCTTCGC 62.090 66.667 6.62 0.00 40.24 4.70
3480 5217 4.802051 GGCTTCGCCCATGCCTCA 62.802 66.667 0.00 0.00 44.06 3.86
3481 5218 2.517875 GCTTCGCCCATGCCTCAT 60.518 61.111 0.00 0.00 0.00 2.90
3482 5219 2.550101 GCTTCGCCCATGCCTCATC 61.550 63.158 0.00 0.00 0.00 2.92
3483 5220 1.147824 CTTCGCCCATGCCTCATCT 59.852 57.895 0.00 0.00 0.00 2.90
3484 5221 0.465097 CTTCGCCCATGCCTCATCTT 60.465 55.000 0.00 0.00 0.00 2.40
3485 5222 0.749091 TTCGCCCATGCCTCATCTTG 60.749 55.000 0.00 0.00 0.00 3.02
3486 5223 1.452651 CGCCCATGCCTCATCTTGT 60.453 57.895 0.00 0.00 0.00 3.16
3487 5224 1.442526 CGCCCATGCCTCATCTTGTC 61.443 60.000 0.00 0.00 0.00 3.18
3488 5225 1.442526 GCCCATGCCTCATCTTGTCG 61.443 60.000 0.00 0.00 0.00 4.35
3489 5226 0.178767 CCCATGCCTCATCTTGTCGA 59.821 55.000 0.00 0.00 0.00 4.20
3490 5227 1.579698 CCATGCCTCATCTTGTCGAG 58.420 55.000 0.00 0.00 0.00 4.04
3491 5228 1.134580 CCATGCCTCATCTTGTCGAGT 60.135 52.381 0.00 0.00 0.00 4.18
3492 5229 1.931841 CATGCCTCATCTTGTCGAGTG 59.068 52.381 0.00 0.00 0.00 3.51
3493 5230 0.247460 TGCCTCATCTTGTCGAGTGG 59.753 55.000 0.00 0.00 0.00 4.00
3494 5231 1.086634 GCCTCATCTTGTCGAGTGGC 61.087 60.000 0.00 0.00 0.00 5.01
3495 5232 0.460987 CCTCATCTTGTCGAGTGGCC 60.461 60.000 0.00 0.00 0.00 5.36
3496 5233 0.247460 CTCATCTTGTCGAGTGGCCA 59.753 55.000 0.00 0.00 0.00 5.36
3497 5234 0.247460 TCATCTTGTCGAGTGGCCAG 59.753 55.000 5.11 0.00 0.00 4.85
3498 5235 0.036952 CATCTTGTCGAGTGGCCAGT 60.037 55.000 14.55 14.55 0.00 4.00
3499 5236 0.036952 ATCTTGTCGAGTGGCCAGTG 60.037 55.000 20.47 10.68 0.00 3.66
3500 5237 1.669115 CTTGTCGAGTGGCCAGTGG 60.669 63.158 20.47 18.01 0.00 4.00
3501 5238 3.177194 TTGTCGAGTGGCCAGTGGG 62.177 63.158 20.47 9.97 37.18 4.61
3524 5261 3.788672 CCCACTGAGGCCTGTAATC 57.211 57.895 12.00 0.00 35.39 1.75
3525 5262 0.911769 CCCACTGAGGCCTGTAATCA 59.088 55.000 12.00 0.00 35.39 2.57
3526 5263 1.134280 CCCACTGAGGCCTGTAATCAG 60.134 57.143 12.00 14.30 44.81 2.90
3527 5264 1.833630 CCACTGAGGCCTGTAATCAGA 59.166 52.381 22.10 0.00 42.48 3.27
3528 5265 2.419297 CCACTGAGGCCTGTAATCAGAC 60.419 54.545 22.10 0.84 42.48 3.51
3529 5266 2.499289 CACTGAGGCCTGTAATCAGACT 59.501 50.000 22.10 1.79 42.48 3.24
3530 5267 3.701542 CACTGAGGCCTGTAATCAGACTA 59.298 47.826 22.10 0.00 42.48 2.59
3531 5268 3.702045 ACTGAGGCCTGTAATCAGACTAC 59.298 47.826 22.10 0.00 42.48 2.73
3532 5269 3.957497 CTGAGGCCTGTAATCAGACTACT 59.043 47.826 12.00 0.00 42.48 2.57
3533 5270 4.353777 TGAGGCCTGTAATCAGACTACTT 58.646 43.478 12.00 0.00 43.76 2.24
3534 5271 5.516044 TGAGGCCTGTAATCAGACTACTTA 58.484 41.667 12.00 0.00 43.76 2.24
3535 5272 6.136857 TGAGGCCTGTAATCAGACTACTTAT 58.863 40.000 12.00 0.00 43.76 1.73
3536 5273 7.295340 TGAGGCCTGTAATCAGACTACTTATA 58.705 38.462 12.00 0.00 43.76 0.98
3537 5274 7.448777 TGAGGCCTGTAATCAGACTACTTATAG 59.551 40.741 12.00 0.00 43.76 1.31
3538 5275 7.527796 AGGCCTGTAATCAGACTACTTATAGA 58.472 38.462 3.11 0.00 43.76 1.98
3539 5276 8.174085 AGGCCTGTAATCAGACTACTTATAGAT 58.826 37.037 3.11 0.00 43.76 1.98
3540 5277 9.463902 GGCCTGTAATCAGACTACTTATAGATA 57.536 37.037 0.00 0.00 43.76 1.98
3546 5283 6.947903 TCAGACTACTTATAGATAGACGCG 57.052 41.667 3.53 3.53 32.23 6.01
3547 5284 6.453943 TCAGACTACTTATAGATAGACGCGT 58.546 40.000 13.85 13.85 32.23 6.01
3548 5285 6.365518 TCAGACTACTTATAGATAGACGCGTG 59.634 42.308 20.70 0.00 32.23 5.34
3549 5286 6.145858 CAGACTACTTATAGATAGACGCGTGT 59.854 42.308 20.70 17.60 32.23 4.49
3550 5287 6.145858 AGACTACTTATAGATAGACGCGTGTG 59.854 42.308 20.70 0.00 32.23 3.82
3551 5288 5.757320 ACTACTTATAGATAGACGCGTGTGT 59.243 40.000 20.70 12.29 32.23 3.72
3552 5289 4.845387 ACTTATAGATAGACGCGTGTGTG 58.155 43.478 20.70 0.00 0.00 3.82
3553 5290 2.776312 ATAGATAGACGCGTGTGTGG 57.224 50.000 20.70 0.00 0.00 4.17
3554 5291 0.736636 TAGATAGACGCGTGTGTGGG 59.263 55.000 20.70 0.00 0.00 4.61
3555 5292 1.518572 GATAGACGCGTGTGTGGGG 60.519 63.158 20.70 0.00 0.00 4.96
3556 5293 2.221906 GATAGACGCGTGTGTGGGGT 62.222 60.000 20.70 0.00 0.00 4.95
3557 5294 0.966875 ATAGACGCGTGTGTGGGGTA 60.967 55.000 20.70 0.00 0.00 3.69
3558 5295 1.177895 TAGACGCGTGTGTGGGGTAA 61.178 55.000 20.70 0.00 0.00 2.85
3559 5296 2.025418 GACGCGTGTGTGGGGTAAG 61.025 63.158 20.70 0.00 0.00 2.34
3560 5297 2.740826 CGCGTGTGTGGGGTAAGG 60.741 66.667 0.00 0.00 0.00 2.69
3561 5298 2.359478 GCGTGTGTGGGGTAAGGG 60.359 66.667 0.00 0.00 0.00 3.95
3562 5299 2.359478 CGTGTGTGGGGTAAGGGC 60.359 66.667 0.00 0.00 0.00 5.19
3563 5300 2.035155 GTGTGTGGGGTAAGGGCC 59.965 66.667 0.00 0.00 0.00 5.80
3564 5301 2.121689 TGTGTGGGGTAAGGGCCT 60.122 61.111 0.00 0.00 0.00 5.19
3565 5302 2.355115 GTGTGGGGTAAGGGCCTG 59.645 66.667 6.92 0.00 0.00 4.85
3566 5303 2.121689 TGTGGGGTAAGGGCCTGT 60.122 61.111 6.92 0.00 0.00 4.00
3567 5304 1.776710 TGTGGGGTAAGGGCCTGTT 60.777 57.895 6.92 0.00 0.00 3.16
3568 5305 1.001269 GTGGGGTAAGGGCCTGTTC 60.001 63.158 6.92 0.00 0.00 3.18
3569 5306 1.151677 TGGGGTAAGGGCCTGTTCT 60.152 57.895 6.92 0.00 0.00 3.01
3570 5307 1.303282 GGGGTAAGGGCCTGTTCTG 59.697 63.158 6.92 0.00 0.00 3.02
3571 5308 1.378646 GGGTAAGGGCCTGTTCTGC 60.379 63.158 6.92 0.00 0.00 4.26
3572 5309 1.378762 GGTAAGGGCCTGTTCTGCA 59.621 57.895 6.92 0.00 0.00 4.41
3573 5310 0.251165 GGTAAGGGCCTGTTCTGCAA 60.251 55.000 6.92 0.00 0.00 4.08
3574 5311 0.881796 GTAAGGGCCTGTTCTGCAAC 59.118 55.000 6.92 0.00 0.00 4.17
3575 5312 0.605319 TAAGGGCCTGTTCTGCAACG 60.605 55.000 6.92 0.00 34.95 4.10
3576 5313 2.594592 GGGCCTGTTCTGCAACGT 60.595 61.111 0.84 0.00 34.95 3.99
3577 5314 2.193536 GGGCCTGTTCTGCAACGTT 61.194 57.895 0.84 0.00 34.95 3.99
3578 5315 1.282875 GGCCTGTTCTGCAACGTTC 59.717 57.895 0.00 0.00 34.95 3.95
3579 5316 1.282875 GCCTGTTCTGCAACGTTCC 59.717 57.895 0.00 0.00 34.95 3.62
3580 5317 1.444119 GCCTGTTCTGCAACGTTCCA 61.444 55.000 0.00 0.00 34.95 3.53
3581 5318 0.588252 CCTGTTCTGCAACGTTCCAG 59.412 55.000 13.22 13.22 34.95 3.86
3582 5319 0.040958 CTGTTCTGCAACGTTCCAGC 60.041 55.000 14.58 8.23 34.95 4.85
3583 5320 0.463654 TGTTCTGCAACGTTCCAGCT 60.464 50.000 14.58 0.00 34.95 4.24
3584 5321 0.235926 GTTCTGCAACGTTCCAGCTC 59.764 55.000 14.58 6.10 0.00 4.09
3585 5322 0.884704 TTCTGCAACGTTCCAGCTCC 60.885 55.000 14.58 0.00 0.00 4.70
3586 5323 1.302033 CTGCAACGTTCCAGCTCCT 60.302 57.895 6.24 0.00 0.00 3.69
3587 5324 1.572085 CTGCAACGTTCCAGCTCCTG 61.572 60.000 6.24 0.00 0.00 3.86
3598 5335 4.625800 GCTCCTGGCTTCGTCAAT 57.374 55.556 0.00 0.00 38.06 2.57
3599 5336 2.859992 GCTCCTGGCTTCGTCAATT 58.140 52.632 0.00 0.00 38.06 2.32
3600 5337 0.729690 GCTCCTGGCTTCGTCAATTC 59.270 55.000 0.00 0.00 38.06 2.17
3601 5338 1.373570 CTCCTGGCTTCGTCAATTCC 58.626 55.000 0.00 0.00 0.00 3.01
3602 5339 0.690192 TCCTGGCTTCGTCAATTCCA 59.310 50.000 0.00 0.00 0.00 3.53
3603 5340 0.804989 CCTGGCTTCGTCAATTCCAC 59.195 55.000 0.00 0.00 0.00 4.02
3604 5341 1.522668 CTGGCTTCGTCAATTCCACA 58.477 50.000 0.00 0.00 0.00 4.17
3605 5342 1.197721 CTGGCTTCGTCAATTCCACAC 59.802 52.381 0.00 0.00 0.00 3.82
3606 5343 1.234821 GGCTTCGTCAATTCCACACA 58.765 50.000 0.00 0.00 0.00 3.72
3607 5344 1.812571 GGCTTCGTCAATTCCACACAT 59.187 47.619 0.00 0.00 0.00 3.21
3608 5345 2.414559 GGCTTCGTCAATTCCACACATG 60.415 50.000 0.00 0.00 0.00 3.21
3609 5346 2.483877 GCTTCGTCAATTCCACACATGA 59.516 45.455 0.00 0.00 0.00 3.07
3610 5347 3.058293 GCTTCGTCAATTCCACACATGAA 60.058 43.478 0.00 0.00 0.00 2.57
3611 5348 4.715896 CTTCGTCAATTCCACACATGAAG 58.284 43.478 0.00 0.00 0.00 3.02
3612 5349 2.483877 TCGTCAATTCCACACATGAAGC 59.516 45.455 0.00 0.00 0.00 3.86
3613 5350 2.485426 CGTCAATTCCACACATGAAGCT 59.515 45.455 0.00 0.00 0.00 3.74
3614 5351 3.684305 CGTCAATTCCACACATGAAGCTA 59.316 43.478 0.00 0.00 0.00 3.32
3615 5352 4.154015 CGTCAATTCCACACATGAAGCTAA 59.846 41.667 0.00 0.00 0.00 3.09
3616 5353 5.393962 GTCAATTCCACACATGAAGCTAAC 58.606 41.667 0.00 0.00 0.00 2.34
3617 5354 4.458989 TCAATTCCACACATGAAGCTAACC 59.541 41.667 0.00 0.00 0.00 2.85
3618 5355 3.500448 TTCCACACATGAAGCTAACCA 57.500 42.857 0.00 0.00 0.00 3.67
3619 5356 3.057969 TCCACACATGAAGCTAACCAG 57.942 47.619 0.00 0.00 0.00 4.00
3620 5357 2.637382 TCCACACATGAAGCTAACCAGA 59.363 45.455 0.00 0.00 0.00 3.86
3621 5358 3.072330 TCCACACATGAAGCTAACCAGAA 59.928 43.478 0.00 0.00 0.00 3.02
3622 5359 3.189287 CCACACATGAAGCTAACCAGAAC 59.811 47.826 0.00 0.00 0.00 3.01
3623 5360 3.067106 ACACATGAAGCTAACCAGAACG 58.933 45.455 0.00 0.00 0.00 3.95
3624 5361 2.076863 ACATGAAGCTAACCAGAACGC 58.923 47.619 0.00 0.00 0.00 4.84
3625 5362 2.289694 ACATGAAGCTAACCAGAACGCT 60.290 45.455 0.00 0.00 0.00 5.07
3626 5363 2.080286 TGAAGCTAACCAGAACGCTC 57.920 50.000 0.00 0.00 31.30 5.03
3627 5364 1.618837 TGAAGCTAACCAGAACGCTCT 59.381 47.619 0.00 0.00 31.30 4.09
3628 5365 2.823747 TGAAGCTAACCAGAACGCTCTA 59.176 45.455 0.00 0.00 31.30 2.43
3629 5366 3.119459 TGAAGCTAACCAGAACGCTCTAG 60.119 47.826 0.00 0.00 31.30 2.43
3630 5367 1.135333 AGCTAACCAGAACGCTCTAGC 59.865 52.381 0.94 0.94 32.02 3.42
3631 5368 1.135333 GCTAACCAGAACGCTCTAGCT 59.865 52.381 0.00 0.00 39.32 3.32
3632 5369 2.796735 GCTAACCAGAACGCTCTAGCTC 60.797 54.545 0.00 0.00 39.32 4.09
3633 5370 0.533032 AACCAGAACGCTCTAGCTCC 59.467 55.000 0.00 0.00 39.32 4.70
3634 5371 0.612174 ACCAGAACGCTCTAGCTCCA 60.612 55.000 0.00 0.00 39.32 3.86
3635 5372 0.532573 CCAGAACGCTCTAGCTCCAA 59.467 55.000 0.00 0.00 39.32 3.53
3636 5373 1.470632 CCAGAACGCTCTAGCTCCAAG 60.471 57.143 0.00 0.00 39.32 3.61
3637 5374 1.474478 CAGAACGCTCTAGCTCCAAGA 59.526 52.381 0.00 0.00 39.32 3.02
3638 5375 2.094494 CAGAACGCTCTAGCTCCAAGAA 60.094 50.000 0.00 0.00 39.32 2.52
3639 5376 2.165437 AGAACGCTCTAGCTCCAAGAAG 59.835 50.000 0.00 0.00 39.32 2.85
3640 5377 1.551452 ACGCTCTAGCTCCAAGAAGT 58.449 50.000 0.00 0.00 39.32 3.01
3641 5378 1.896465 ACGCTCTAGCTCCAAGAAGTT 59.104 47.619 0.00 0.00 39.32 2.66
3642 5379 2.266554 CGCTCTAGCTCCAAGAAGTTG 58.733 52.381 0.00 0.00 39.32 3.16
3643 5380 2.992997 CGCTCTAGCTCCAAGAAGTTGG 60.993 54.545 0.00 0.00 44.05 3.77
3655 5392 4.716943 CAAGAAGTTGGAAATCGAGAAGC 58.283 43.478 0.00 0.00 0.00 3.86
3656 5393 3.339141 AGAAGTTGGAAATCGAGAAGCC 58.661 45.455 0.00 0.00 0.00 4.35
3657 5394 1.726853 AGTTGGAAATCGAGAAGCCG 58.273 50.000 0.00 0.00 0.00 5.52
3658 5395 1.275291 AGTTGGAAATCGAGAAGCCGA 59.725 47.619 0.00 0.00 43.16 5.54
3659 5396 1.393883 GTTGGAAATCGAGAAGCCGAC 59.606 52.381 0.00 0.00 41.70 4.79
3660 5397 0.457853 TGGAAATCGAGAAGCCGACG 60.458 55.000 0.00 0.00 41.70 5.12
3661 5398 0.179145 GGAAATCGAGAAGCCGACGA 60.179 55.000 0.00 0.00 41.70 4.20
3662 5399 0.915227 GAAATCGAGAAGCCGACGAC 59.085 55.000 0.00 0.00 41.70 4.34
3663 5400 0.458025 AAATCGAGAAGCCGACGACC 60.458 55.000 0.00 0.00 41.70 4.79
3664 5401 1.313812 AATCGAGAAGCCGACGACCT 61.314 55.000 0.00 0.00 41.70 3.85
3665 5402 1.994507 ATCGAGAAGCCGACGACCTG 61.995 60.000 0.00 0.00 41.70 4.00
3666 5403 2.963371 GAGAAGCCGACGACCTGT 59.037 61.111 0.00 0.00 0.00 4.00
3667 5404 1.153997 GAGAAGCCGACGACCTGTC 60.154 63.158 0.00 0.00 44.53 3.51
3668 5405 1.587933 GAGAAGCCGACGACCTGTCT 61.588 60.000 0.00 0.00 45.87 3.41
3669 5406 0.322277 AGAAGCCGACGACCTGTCTA 60.322 55.000 0.00 0.00 45.87 2.59
3670 5407 0.099082 GAAGCCGACGACCTGTCTAG 59.901 60.000 0.00 0.00 45.87 2.43
3671 5408 0.608582 AAGCCGACGACCTGTCTAGT 60.609 55.000 0.00 0.00 45.87 2.57
3672 5409 1.136984 GCCGACGACCTGTCTAGTG 59.863 63.158 0.00 0.00 45.87 2.74
3673 5410 1.584380 GCCGACGACCTGTCTAGTGT 61.584 60.000 0.00 0.00 45.87 3.55
3674 5411 1.730501 CCGACGACCTGTCTAGTGTA 58.269 55.000 0.00 0.00 45.87 2.90
3675 5412 2.079158 CCGACGACCTGTCTAGTGTAA 58.921 52.381 0.00 0.00 45.87 2.41
3676 5413 2.485426 CCGACGACCTGTCTAGTGTAAA 59.515 50.000 0.00 0.00 45.87 2.01
3677 5414 3.058016 CCGACGACCTGTCTAGTGTAAAA 60.058 47.826 0.00 0.00 45.87 1.52
3678 5415 4.539870 CGACGACCTGTCTAGTGTAAAAA 58.460 43.478 0.00 0.00 45.87 1.94
3696 5433 4.655762 AAAAAGGAGAAGTTGGTGAAGC 57.344 40.909 0.00 0.00 0.00 3.86
3697 5434 3.584733 AAAGGAGAAGTTGGTGAAGCT 57.415 42.857 0.00 0.00 0.00 3.74
3698 5435 2.557920 AGGAGAAGTTGGTGAAGCTG 57.442 50.000 0.00 0.00 0.00 4.24
3699 5436 1.072965 AGGAGAAGTTGGTGAAGCTGG 59.927 52.381 0.00 0.00 0.00 4.85
3700 5437 1.202818 GGAGAAGTTGGTGAAGCTGGT 60.203 52.381 0.00 0.00 0.00 4.00
3701 5438 2.147150 GAGAAGTTGGTGAAGCTGGTC 58.853 52.381 0.00 0.00 0.00 4.02
3702 5439 1.771255 AGAAGTTGGTGAAGCTGGTCT 59.229 47.619 0.00 0.00 0.00 3.85
3703 5440 1.876156 GAAGTTGGTGAAGCTGGTCTG 59.124 52.381 0.00 0.00 0.00 3.51
3704 5441 0.109342 AGTTGGTGAAGCTGGTCTGG 59.891 55.000 0.00 0.00 0.00 3.86
3705 5442 0.108585 GTTGGTGAAGCTGGTCTGGA 59.891 55.000 0.00 0.00 0.00 3.86
3706 5443 1.067295 TTGGTGAAGCTGGTCTGGAT 58.933 50.000 0.00 0.00 0.00 3.41
3707 5444 0.615331 TGGTGAAGCTGGTCTGGATC 59.385 55.000 0.00 0.00 0.00 3.36
3708 5445 0.615331 GGTGAAGCTGGTCTGGATCA 59.385 55.000 0.00 0.00 0.00 2.92
3709 5446 1.406614 GGTGAAGCTGGTCTGGATCAG 60.407 57.143 6.51 6.51 42.35 2.90
3710 5447 1.552337 GTGAAGCTGGTCTGGATCAGA 59.448 52.381 14.26 0.00 42.03 3.27
3711 5448 2.170187 GTGAAGCTGGTCTGGATCAGAT 59.830 50.000 14.26 5.44 42.03 2.90
3712 5449 2.433604 TGAAGCTGGTCTGGATCAGATC 59.566 50.000 14.26 11.17 42.03 2.75
3723 5460 2.985896 GGATCAGATCCGTGAAAACCA 58.014 47.619 14.02 0.00 40.13 3.67
3724 5461 3.343617 GGATCAGATCCGTGAAAACCAA 58.656 45.455 14.02 0.00 40.13 3.67
3725 5462 3.375299 GGATCAGATCCGTGAAAACCAAG 59.625 47.826 14.02 0.00 40.13 3.61
3726 5463 3.762407 TCAGATCCGTGAAAACCAAGA 57.238 42.857 0.00 0.00 0.00 3.02
3727 5464 4.079980 TCAGATCCGTGAAAACCAAGAA 57.920 40.909 0.00 0.00 0.00 2.52
3728 5465 4.065088 TCAGATCCGTGAAAACCAAGAAG 58.935 43.478 0.00 0.00 0.00 2.85
3729 5466 3.815401 CAGATCCGTGAAAACCAAGAAGT 59.185 43.478 0.00 0.00 0.00 3.01
3730 5467 4.275936 CAGATCCGTGAAAACCAAGAAGTT 59.724 41.667 0.00 0.00 0.00 2.66
3731 5468 4.275936 AGATCCGTGAAAACCAAGAAGTTG 59.724 41.667 0.00 0.00 0.00 3.16
3732 5469 3.611970 TCCGTGAAAACCAAGAAGTTGA 58.388 40.909 0.00 0.00 35.46 3.18
3733 5470 4.011023 TCCGTGAAAACCAAGAAGTTGAA 58.989 39.130 0.00 0.00 35.46 2.69
3734 5471 4.095782 TCCGTGAAAACCAAGAAGTTGAAG 59.904 41.667 0.00 0.00 35.46 3.02
3735 5472 4.142469 CCGTGAAAACCAAGAAGTTGAAGT 60.142 41.667 0.00 0.00 35.46 3.01
3736 5473 5.399013 CGTGAAAACCAAGAAGTTGAAGTT 58.601 37.500 0.00 0.00 35.46 2.66
3737 5474 5.286082 CGTGAAAACCAAGAAGTTGAAGTTG 59.714 40.000 0.00 0.00 35.46 3.16
3738 5475 6.386654 GTGAAAACCAAGAAGTTGAAGTTGA 58.613 36.000 0.00 0.00 35.46 3.18
3739 5476 6.528072 GTGAAAACCAAGAAGTTGAAGTTGAG 59.472 38.462 0.00 0.00 35.46 3.02
3740 5477 6.432783 TGAAAACCAAGAAGTTGAAGTTGAGA 59.567 34.615 0.00 0.00 35.46 3.27
3741 5478 5.819825 AACCAAGAAGTTGAAGTTGAGAC 57.180 39.130 0.00 0.00 35.46 3.36
3742 5479 3.871594 ACCAAGAAGTTGAAGTTGAGACG 59.128 43.478 0.00 0.00 35.46 4.18
3743 5480 4.119862 CCAAGAAGTTGAAGTTGAGACGA 58.880 43.478 0.00 0.00 35.46 4.20
3744 5481 4.570772 CCAAGAAGTTGAAGTTGAGACGAA 59.429 41.667 0.00 0.00 35.46 3.85
3745 5482 5.237344 CCAAGAAGTTGAAGTTGAGACGAAT 59.763 40.000 0.00 0.00 35.46 3.34
3746 5483 6.238484 CCAAGAAGTTGAAGTTGAGACGAATT 60.238 38.462 0.00 0.00 35.46 2.17
3747 5484 7.042051 CCAAGAAGTTGAAGTTGAGACGAATTA 60.042 37.037 0.00 0.00 35.46 1.40
3748 5485 7.409465 AGAAGTTGAAGTTGAGACGAATTAC 57.591 36.000 0.00 0.00 0.00 1.89
3749 5486 6.984474 AGAAGTTGAAGTTGAGACGAATTACA 59.016 34.615 0.00 0.00 0.00 2.41
3750 5487 6.526566 AGTTGAAGTTGAGACGAATTACAC 57.473 37.500 0.00 0.00 0.00 2.90
3751 5488 5.465724 AGTTGAAGTTGAGACGAATTACACC 59.534 40.000 0.00 0.00 0.00 4.16
3752 5489 4.951254 TGAAGTTGAGACGAATTACACCA 58.049 39.130 0.00 0.00 0.00 4.17
3753 5490 4.988540 TGAAGTTGAGACGAATTACACCAG 59.011 41.667 0.00 0.00 0.00 4.00
3754 5491 3.926616 AGTTGAGACGAATTACACCAGG 58.073 45.455 0.00 0.00 0.00 4.45
3755 5492 3.323979 AGTTGAGACGAATTACACCAGGT 59.676 43.478 0.00 0.00 0.00 4.00
3756 5493 4.062991 GTTGAGACGAATTACACCAGGTT 58.937 43.478 0.00 0.00 0.00 3.50
3757 5494 3.659786 TGAGACGAATTACACCAGGTTG 58.340 45.455 0.00 0.00 0.00 3.77
3758 5495 2.415512 GAGACGAATTACACCAGGTTGC 59.584 50.000 0.00 0.00 0.00 4.17
3759 5496 1.467342 GACGAATTACACCAGGTTGCC 59.533 52.381 0.00 0.00 0.00 4.52
3760 5497 1.202830 ACGAATTACACCAGGTTGCCA 60.203 47.619 0.00 0.00 0.00 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.113260 ACAAGCGGGCTATATCTTGAC 57.887 47.619 7.69 0.00 39.22 3.18
80 81 5.782925 AGTTCTTCCACTCCCAGTCTATAT 58.217 41.667 0.00 0.00 0.00 0.86
85 95 2.234168 GGTAGTTCTTCCACTCCCAGTC 59.766 54.545 0.00 0.00 0.00 3.51
346 364 8.780846 ATAGTAGTCCACTGAGAATAGATACG 57.219 38.462 0.00 0.00 38.24 3.06
486 504 6.570672 ATTCTAGCAAGATACCGAACGATA 57.429 37.500 0.00 0.00 0.00 2.92
509 532 4.706476 CCCATAACTTCTTGATGCTCCAAA 59.294 41.667 0.00 0.00 0.00 3.28
597 620 8.336235 TCCTGAAACTGAAACCCTTGATAATAT 58.664 33.333 0.00 0.00 0.00 1.28
601 624 5.576563 TCCTGAAACTGAAACCCTTGATA 57.423 39.130 0.00 0.00 0.00 2.15
732 781 6.437162 AGCATCTTTTTGTGTGTATGGGTATT 59.563 34.615 0.00 0.00 0.00 1.89
755 804 4.054671 CAACTTCCTTGATCGAGGATAGC 58.945 47.826 28.99 0.00 44.98 2.97
796 845 1.413812 TGCATCGCACCAGACATAGAT 59.586 47.619 0.00 0.00 31.71 1.98
865 918 1.082117 GTTAGACACATCGGGGTGCG 61.082 60.000 7.19 0.00 42.55 5.34
906 959 8.282982 ACAGGTATATATACAGGATCCCTACAG 58.717 40.741 21.56 0.00 34.98 2.74
966 1030 3.379372 CGAATGAATGAATGAAGGCCTGT 59.621 43.478 5.69 0.00 0.00 4.00
1005 1069 1.471684 GATTGTGCTTGCTCTCCTTGG 59.528 52.381 0.00 0.00 0.00 3.61
2132 2214 2.043450 CGCAGGAGGAGAGGAGGT 60.043 66.667 0.00 0.00 0.00 3.85
2613 4350 3.686016 ACGCTTCTTAATGATGTTGGGT 58.314 40.909 0.00 0.00 0.00 4.51
2703 4440 1.128809 TGTAAACCTTCCCTGGCCGA 61.129 55.000 0.00 0.00 0.00 5.54
2773 4510 4.017126 CCCATAGACCAAAAGTTTCCCTC 58.983 47.826 0.00 0.00 0.00 4.30
2775 4512 3.762288 GTCCCATAGACCAAAAGTTTCCC 59.238 47.826 0.00 0.00 39.84 3.97
2776 4513 4.403734 TGTCCCATAGACCAAAAGTTTCC 58.596 43.478 0.00 0.00 45.68 3.13
2777 4514 7.682021 GCATATGTCCCATAGACCAAAAGTTTC 60.682 40.741 4.29 0.00 45.68 2.78
2778 4515 6.096846 GCATATGTCCCATAGACCAAAAGTTT 59.903 38.462 4.29 0.00 45.68 2.66
2779 4516 5.594317 GCATATGTCCCATAGACCAAAAGTT 59.406 40.000 4.29 0.00 45.68 2.66
2780 4517 5.133221 GCATATGTCCCATAGACCAAAAGT 58.867 41.667 4.29 0.00 45.68 2.66
2781 4518 5.009010 GTGCATATGTCCCATAGACCAAAAG 59.991 44.000 4.29 0.00 45.68 2.27
2782 4519 4.887071 GTGCATATGTCCCATAGACCAAAA 59.113 41.667 4.29 0.00 45.68 2.44
2783 4520 4.460263 GTGCATATGTCCCATAGACCAAA 58.540 43.478 4.29 0.00 45.68 3.28
2784 4521 3.181445 GGTGCATATGTCCCATAGACCAA 60.181 47.826 4.29 0.00 45.68 3.67
2785 4522 2.371841 GGTGCATATGTCCCATAGACCA 59.628 50.000 4.29 0.00 45.68 4.02
2786 4523 2.290323 GGGTGCATATGTCCCATAGACC 60.290 54.545 23.76 11.09 45.68 3.85
2787 4524 2.639839 AGGGTGCATATGTCCCATAGAC 59.360 50.000 27.54 9.98 46.51 2.59
2788 4525 2.990195 AGGGTGCATATGTCCCATAGA 58.010 47.619 27.54 0.00 43.31 1.98
2789 4526 6.464892 CCATATAGGGTGCATATGTCCCATAG 60.465 46.154 27.54 17.13 43.31 2.23
2790 4527 5.369404 CCATATAGGGTGCATATGTCCCATA 59.631 44.000 27.54 22.81 43.31 2.74
2791 4528 4.166725 CCATATAGGGTGCATATGTCCCAT 59.833 45.833 27.54 21.95 43.31 4.00
2792 4529 3.523157 CCATATAGGGTGCATATGTCCCA 59.477 47.826 27.54 18.62 43.31 4.37
2793 4530 4.156455 CCATATAGGGTGCATATGTCCC 57.844 50.000 22.23 22.23 41.36 4.46
2830 4567 9.447157 TCAGGAATTTTTGACTTTTTGTTGAAT 57.553 25.926 0.00 0.00 0.00 2.57
2831 4568 8.839310 TCAGGAATTTTTGACTTTTTGTTGAA 57.161 26.923 0.00 0.00 0.00 2.69
2832 4569 8.839310 TTCAGGAATTTTTGACTTTTTGTTGA 57.161 26.923 0.00 0.00 0.00 3.18
2833 4570 9.890352 TTTTCAGGAATTTTTGACTTTTTGTTG 57.110 25.926 0.00 0.00 0.00 3.33
2869 4606 9.367444 CGAGTACAATAGAAGGTCAAGTTTATT 57.633 33.333 0.00 0.00 0.00 1.40
2870 4607 8.529476 ACGAGTACAATAGAAGGTCAAGTTTAT 58.471 33.333 0.00 0.00 0.00 1.40
2871 4608 7.811236 CACGAGTACAATAGAAGGTCAAGTTTA 59.189 37.037 0.00 0.00 0.00 2.01
2872 4609 6.645415 CACGAGTACAATAGAAGGTCAAGTTT 59.355 38.462 0.00 0.00 0.00 2.66
2873 4610 6.015688 TCACGAGTACAATAGAAGGTCAAGTT 60.016 38.462 0.00 0.00 0.00 2.66
2874 4611 5.475909 TCACGAGTACAATAGAAGGTCAAGT 59.524 40.000 0.00 0.00 0.00 3.16
2875 4612 5.950883 TCACGAGTACAATAGAAGGTCAAG 58.049 41.667 0.00 0.00 0.00 3.02
2876 4613 5.708697 TCTCACGAGTACAATAGAAGGTCAA 59.291 40.000 0.00 0.00 0.00 3.18
2877 4614 5.250982 TCTCACGAGTACAATAGAAGGTCA 58.749 41.667 0.00 0.00 0.00 4.02
2878 4615 5.814764 TCTCACGAGTACAATAGAAGGTC 57.185 43.478 0.00 0.00 0.00 3.85
2879 4616 6.585695 TTTCTCACGAGTACAATAGAAGGT 57.414 37.500 0.00 0.00 0.00 3.50
2880 4617 9.582431 TTTATTTCTCACGAGTACAATAGAAGG 57.418 33.333 0.00 0.00 0.00 3.46
2885 4622 9.878667 TGGATTTTATTTCTCACGAGTACAATA 57.121 29.630 0.00 0.00 0.00 1.90
2886 4623 8.786826 TGGATTTTATTTCTCACGAGTACAAT 57.213 30.769 0.00 0.00 0.00 2.71
2887 4624 8.610248 TTGGATTTTATTTCTCACGAGTACAA 57.390 30.769 0.00 0.00 0.00 2.41
2888 4625 8.610248 TTTGGATTTTATTTCTCACGAGTACA 57.390 30.769 0.00 0.00 0.00 2.90
2889 4626 9.887406 TTTTTGGATTTTATTTCTCACGAGTAC 57.113 29.630 0.00 0.00 0.00 2.73
2944 4681 9.830975 ACACTATTTTAGCCAAAAATTTGTCTT 57.169 25.926 11.38 0.00 43.75 3.01
2945 4682 9.260002 CACACTATTTTAGCCAAAAATTTGTCT 57.740 29.630 11.38 0.28 43.75 3.41
2946 4683 9.255304 TCACACTATTTTAGCCAAAAATTTGTC 57.745 29.630 11.38 0.00 43.75 3.18
2947 4684 9.606631 TTCACACTATTTTAGCCAAAAATTTGT 57.393 25.926 11.38 11.68 43.75 2.83
2952 4689 9.906660 CACTATTCACACTATTTTAGCCAAAAA 57.093 29.630 0.00 0.00 41.21 1.94
2953 4690 9.290988 TCACTATTCACACTATTTTAGCCAAAA 57.709 29.630 0.00 0.00 38.00 2.44
2954 4691 8.726988 GTCACTATTCACACTATTTTAGCCAAA 58.273 33.333 0.00 0.00 0.00 3.28
2955 4692 7.335924 GGTCACTATTCACACTATTTTAGCCAA 59.664 37.037 0.00 0.00 0.00 4.52
2956 4693 6.821665 GGTCACTATTCACACTATTTTAGCCA 59.178 38.462 0.00 0.00 0.00 4.75
2957 4694 6.018994 CGGTCACTATTCACACTATTTTAGCC 60.019 42.308 0.00 0.00 0.00 3.93
2958 4695 6.755141 TCGGTCACTATTCACACTATTTTAGC 59.245 38.462 0.00 0.00 0.00 3.09
2959 4696 8.873215 ATCGGTCACTATTCACACTATTTTAG 57.127 34.615 0.00 0.00 0.00 1.85
2961 4698 9.832445 ATTATCGGTCACTATTCACACTATTTT 57.168 29.630 0.00 0.00 0.00 1.82
2964 4701 8.244802 GCTATTATCGGTCACTATTCACACTAT 58.755 37.037 0.00 0.00 0.00 2.12
2965 4702 7.229907 TGCTATTATCGGTCACTATTCACACTA 59.770 37.037 0.00 0.00 0.00 2.74
2966 4703 6.040504 TGCTATTATCGGTCACTATTCACACT 59.959 38.462 0.00 0.00 0.00 3.55
2967 4704 6.213677 TGCTATTATCGGTCACTATTCACAC 58.786 40.000 0.00 0.00 0.00 3.82
2968 4705 6.399639 TGCTATTATCGGTCACTATTCACA 57.600 37.500 0.00 0.00 0.00 3.58
2969 4706 7.709269 TTTGCTATTATCGGTCACTATTCAC 57.291 36.000 0.00 0.00 0.00 3.18
2970 4707 9.990360 TTATTTGCTATTATCGGTCACTATTCA 57.010 29.630 0.00 0.00 0.00 2.57
3006 4743 4.799564 AAAGTTGACCTCACAGCAAAAA 57.200 36.364 0.00 0.00 0.00 1.94
3007 4744 4.021544 ACAAAAGTTGACCTCACAGCAAAA 60.022 37.500 0.00 0.00 0.00 2.44
3008 4745 3.509575 ACAAAAGTTGACCTCACAGCAAA 59.490 39.130 0.00 0.00 0.00 3.68
3009 4746 3.088532 ACAAAAGTTGACCTCACAGCAA 58.911 40.909 0.00 0.00 0.00 3.91
3010 4747 2.722094 ACAAAAGTTGACCTCACAGCA 58.278 42.857 0.00 0.00 0.00 4.41
3011 4748 3.782889 AACAAAAGTTGACCTCACAGC 57.217 42.857 0.00 0.00 0.00 4.40
3034 4771 8.484799 GCACTGATATATAAATGTCGACGAAAA 58.515 33.333 11.62 0.00 0.00 2.29
3035 4772 7.650104 TGCACTGATATATAAATGTCGACGAAA 59.350 33.333 11.62 0.00 0.00 3.46
3036 4773 7.142680 TGCACTGATATATAAATGTCGACGAA 58.857 34.615 11.62 0.00 0.00 3.85
3037 4774 6.674066 TGCACTGATATATAAATGTCGACGA 58.326 36.000 11.62 0.00 0.00 4.20
3038 4775 6.927933 TGCACTGATATATAAATGTCGACG 57.072 37.500 11.62 0.00 0.00 5.12
3039 4776 9.586150 CTTTTGCACTGATATATAAATGTCGAC 57.414 33.333 9.11 9.11 0.00 4.20
3040 4777 9.325198 ACTTTTGCACTGATATATAAATGTCGA 57.675 29.630 0.00 0.00 0.00 4.20
3049 4786 9.672673 ACTTGACTTACTTTTGCACTGATATAT 57.327 29.630 0.00 0.00 0.00 0.86
3050 4787 8.935844 CACTTGACTTACTTTTGCACTGATATA 58.064 33.333 0.00 0.00 0.00 0.86
3051 4788 7.445402 ACACTTGACTTACTTTTGCACTGATAT 59.555 33.333 0.00 0.00 0.00 1.63
3052 4789 6.765989 ACACTTGACTTACTTTTGCACTGATA 59.234 34.615 0.00 0.00 0.00 2.15
3053 4790 5.590259 ACACTTGACTTACTTTTGCACTGAT 59.410 36.000 0.00 0.00 0.00 2.90
3054 4791 4.941263 ACACTTGACTTACTTTTGCACTGA 59.059 37.500 0.00 0.00 0.00 3.41
3055 4792 5.235305 ACACTTGACTTACTTTTGCACTG 57.765 39.130 0.00 0.00 0.00 3.66
3056 4793 5.897377 AACACTTGACTTACTTTTGCACT 57.103 34.783 0.00 0.00 0.00 4.40
3057 4794 6.364976 ACAAAACACTTGACTTACTTTTGCAC 59.635 34.615 0.00 0.00 33.72 4.57
3058 4795 6.451393 ACAAAACACTTGACTTACTTTTGCA 58.549 32.000 0.00 0.00 33.72 4.08
3059 4796 6.584563 TGACAAAACACTTGACTTACTTTTGC 59.415 34.615 0.00 0.00 33.72 3.68
3060 4797 8.514136 TTGACAAAACACTTGACTTACTTTTG 57.486 30.769 0.00 0.00 35.61 2.44
3061 4798 9.535878 TTTTGACAAAACACTTGACTTACTTTT 57.464 25.926 9.30 0.00 0.00 2.27
3062 4799 9.705290 ATTTTGACAAAACACTTGACTTACTTT 57.295 25.926 15.36 0.00 32.37 2.66
3065 4802 9.783256 ACTATTTTGACAAAACACTTGACTTAC 57.217 29.630 15.36 0.00 32.37 2.34
3067 4804 9.353999 GAACTATTTTGACAAAACACTTGACTT 57.646 29.630 15.36 0.00 32.37 3.01
3068 4805 8.739972 AGAACTATTTTGACAAAACACTTGACT 58.260 29.630 15.36 7.03 32.37 3.41
3069 4806 8.911247 AGAACTATTTTGACAAAACACTTGAC 57.089 30.769 15.36 5.14 32.37 3.18
3072 4809 9.797556 GGTAAGAACTATTTTGACAAAACACTT 57.202 29.630 15.36 15.89 32.37 3.16
3073 4810 9.185680 AGGTAAGAACTATTTTGACAAAACACT 57.814 29.630 15.36 3.23 32.37 3.55
3127 4864 9.646522 GTATATGCATCCTATATGGGGATTTTT 57.353 33.333 0.19 0.00 41.17 1.94
3128 4865 8.790765 TGTATATGCATCCTATATGGGGATTTT 58.209 33.333 0.19 0.00 41.17 1.82
3129 4866 8.348867 TGTATATGCATCCTATATGGGGATTT 57.651 34.615 0.19 0.19 41.17 2.17
3130 4867 7.952847 TGTATATGCATCCTATATGGGGATT 57.047 36.000 0.19 0.00 41.17 3.01
3131 4868 7.573994 AGTTGTATATGCATCCTATATGGGGAT 59.426 37.037 0.19 5.82 43.60 3.85
3132 4869 6.908593 AGTTGTATATGCATCCTATATGGGGA 59.091 38.462 0.19 3.60 37.26 4.81
3133 4870 7.141758 AGTTGTATATGCATCCTATATGGGG 57.858 40.000 0.19 0.00 36.20 4.96
3134 4871 8.370940 CCTAGTTGTATATGCATCCTATATGGG 58.629 40.741 0.19 0.00 36.20 4.00
3135 4872 9.147732 TCCTAGTTGTATATGCATCCTATATGG 57.852 37.037 0.19 0.00 37.10 2.74
3138 4875 8.978472 GGTTCCTAGTTGTATATGCATCCTATA 58.022 37.037 0.19 0.00 0.00 1.31
3139 4876 7.457852 TGGTTCCTAGTTGTATATGCATCCTAT 59.542 37.037 0.19 0.00 0.00 2.57
3140 4877 6.785466 TGGTTCCTAGTTGTATATGCATCCTA 59.215 38.462 0.19 0.00 0.00 2.94
3141 4878 5.606749 TGGTTCCTAGTTGTATATGCATCCT 59.393 40.000 0.19 0.00 0.00 3.24
3142 4879 5.865085 TGGTTCCTAGTTGTATATGCATCC 58.135 41.667 0.19 0.00 0.00 3.51
3143 4880 7.499232 ACTTTGGTTCCTAGTTGTATATGCATC 59.501 37.037 0.19 0.00 0.00 3.91
3144 4881 7.283127 CACTTTGGTTCCTAGTTGTATATGCAT 59.717 37.037 3.79 3.79 0.00 3.96
3145 4882 6.597672 CACTTTGGTTCCTAGTTGTATATGCA 59.402 38.462 0.00 0.00 0.00 3.96
3146 4883 6.598064 ACACTTTGGTTCCTAGTTGTATATGC 59.402 38.462 0.00 0.00 0.00 3.14
3147 4884 9.832445 ATACACTTTGGTTCCTAGTTGTATATG 57.168 33.333 0.00 0.00 0.00 1.78
3150 4887 9.227777 GAAATACACTTTGGTTCCTAGTTGTAT 57.772 33.333 0.00 0.00 0.00 2.29
3151 4888 7.662669 GGAAATACACTTTGGTTCCTAGTTGTA 59.337 37.037 0.00 0.00 0.00 2.41
3152 4889 6.489022 GGAAATACACTTTGGTTCCTAGTTGT 59.511 38.462 0.00 0.00 0.00 3.32
3153 4890 6.072119 GGGAAATACACTTTGGTTCCTAGTTG 60.072 42.308 0.00 0.00 0.00 3.16
3154 4891 6.008331 GGGAAATACACTTTGGTTCCTAGTT 58.992 40.000 0.00 0.00 0.00 2.24
3155 4892 5.567430 GGGAAATACACTTTGGTTCCTAGT 58.433 41.667 0.00 0.00 0.00 2.57
3156 4893 4.634443 CGGGAAATACACTTTGGTTCCTAG 59.366 45.833 0.00 0.00 0.00 3.02
3157 4894 4.286549 TCGGGAAATACACTTTGGTTCCTA 59.713 41.667 0.00 0.00 0.00 2.94
3158 4895 3.073356 TCGGGAAATACACTTTGGTTCCT 59.927 43.478 0.00 0.00 0.00 3.36
3159 4896 3.414269 TCGGGAAATACACTTTGGTTCC 58.586 45.455 0.00 0.00 0.00 3.62
3160 4897 4.698304 TCATCGGGAAATACACTTTGGTTC 59.302 41.667 0.00 0.00 0.00 3.62
3161 4898 4.457949 GTCATCGGGAAATACACTTTGGTT 59.542 41.667 0.00 0.00 0.00 3.67
3162 4899 4.007659 GTCATCGGGAAATACACTTTGGT 58.992 43.478 0.00 0.00 0.00 3.67
3163 4900 3.063452 CGTCATCGGGAAATACACTTTGG 59.937 47.826 0.00 0.00 0.00 3.28
3164 4901 4.258935 CGTCATCGGGAAATACACTTTG 57.741 45.455 0.00 0.00 0.00 2.77
3178 4915 1.227999 AACAAGTGGTGCCGTCATCG 61.228 55.000 0.00 0.00 0.00 3.84
3179 4916 0.238289 CAACAAGTGGTGCCGTCATC 59.762 55.000 0.00 0.00 0.00 2.92
3180 4917 0.179032 TCAACAAGTGGTGCCGTCAT 60.179 50.000 0.00 0.00 31.48 3.06
3181 4918 0.393132 TTCAACAAGTGGTGCCGTCA 60.393 50.000 0.00 0.00 31.48 4.35
3182 4919 0.028902 GTTCAACAAGTGGTGCCGTC 59.971 55.000 0.00 0.00 31.48 4.79
3183 4920 0.393808 AGTTCAACAAGTGGTGCCGT 60.394 50.000 0.00 0.00 31.48 5.68
3184 4921 0.738389 AAGTTCAACAAGTGGTGCCG 59.262 50.000 0.00 0.00 31.48 5.69
3185 4922 1.476488 ACAAGTTCAACAAGTGGTGCC 59.524 47.619 0.00 0.00 31.48 5.01
3186 4923 2.939460 ACAAGTTCAACAAGTGGTGC 57.061 45.000 0.00 0.00 31.48 5.01
3187 4924 5.448632 GGAAGTACAAGTTCAACAAGTGGTG 60.449 44.000 0.00 0.00 29.20 4.17
3188 4925 4.638865 GGAAGTACAAGTTCAACAAGTGGT 59.361 41.667 0.00 0.00 29.20 4.16
3189 4926 4.881850 AGGAAGTACAAGTTCAACAAGTGG 59.118 41.667 0.00 0.00 29.20 4.00
3190 4927 6.292919 GCTAGGAAGTACAAGTTCAACAAGTG 60.293 42.308 0.00 0.00 29.20 3.16
3191 4928 5.758784 GCTAGGAAGTACAAGTTCAACAAGT 59.241 40.000 0.00 0.00 29.20 3.16
3192 4929 5.992217 AGCTAGGAAGTACAAGTTCAACAAG 59.008 40.000 0.00 0.00 29.20 3.16
3193 4930 5.925509 AGCTAGGAAGTACAAGTTCAACAA 58.074 37.500 0.00 0.00 29.20 2.83
3194 4931 5.539048 GAGCTAGGAAGTACAAGTTCAACA 58.461 41.667 0.00 0.00 29.20 3.33
3195 4932 4.621886 CGAGCTAGGAAGTACAAGTTCAAC 59.378 45.833 0.00 0.00 29.20 3.18
3196 4933 4.321750 CCGAGCTAGGAAGTACAAGTTCAA 60.322 45.833 7.14 0.00 29.20 2.69
3197 4934 3.192844 CCGAGCTAGGAAGTACAAGTTCA 59.807 47.826 7.14 0.00 29.20 3.18
3198 4935 3.193056 ACCGAGCTAGGAAGTACAAGTTC 59.807 47.826 20.86 0.00 34.73 3.01
3199 4936 3.163467 ACCGAGCTAGGAAGTACAAGTT 58.837 45.455 20.86 0.00 34.73 2.66
3200 4937 2.805194 ACCGAGCTAGGAAGTACAAGT 58.195 47.619 20.86 0.00 34.73 3.16
3201 4938 3.870633 AACCGAGCTAGGAAGTACAAG 57.129 47.619 20.86 0.00 34.73 3.16
3202 4939 4.768968 ACTAAACCGAGCTAGGAAGTACAA 59.231 41.667 20.86 0.00 34.73 2.41
3203 4940 4.338879 ACTAAACCGAGCTAGGAAGTACA 58.661 43.478 20.86 0.00 34.73 2.90
3204 4941 4.979943 ACTAAACCGAGCTAGGAAGTAC 57.020 45.455 20.86 0.00 34.73 2.73
3205 4942 4.578105 GCTACTAAACCGAGCTAGGAAGTA 59.422 45.833 20.86 19.36 33.28 2.24
3206 4943 3.380954 GCTACTAAACCGAGCTAGGAAGT 59.619 47.826 20.86 19.29 33.28 3.01
3207 4944 3.633065 AGCTACTAAACCGAGCTAGGAAG 59.367 47.826 20.86 14.92 44.65 3.46
3208 4945 3.629087 AGCTACTAAACCGAGCTAGGAA 58.371 45.455 20.86 3.66 44.65 3.36
3209 4946 3.294038 AGCTACTAAACCGAGCTAGGA 57.706 47.619 20.86 0.00 44.65 2.94
3212 4949 3.818180 AGCTAGCTACTAAACCGAGCTA 58.182 45.455 17.69 3.08 44.65 3.32
3214 4951 3.439895 AAGCTAGCTACTAAACCGAGC 57.560 47.619 19.70 0.00 36.42 5.03
3215 4952 5.754543 ACTAAGCTAGCTACTAAACCGAG 57.245 43.478 19.70 6.80 0.00 4.63
3216 4953 6.521151 AAACTAAGCTAGCTACTAAACCGA 57.479 37.500 19.70 0.00 0.00 4.69
3217 4954 7.034397 AGAAAACTAAGCTAGCTACTAAACCG 58.966 38.462 19.70 3.11 0.00 4.44
3218 4955 8.774890 AAGAAAACTAAGCTAGCTACTAAACC 57.225 34.615 19.70 6.06 0.00 3.27
3221 4958 9.991906 TGAAAAGAAAACTAAGCTAGCTACTAA 57.008 29.630 19.70 3.23 0.00 2.24
3222 4959 9.640963 CTGAAAAGAAAACTAAGCTAGCTACTA 57.359 33.333 19.70 6.83 0.00 1.82
3223 4960 8.151596 ACTGAAAAGAAAACTAAGCTAGCTACT 58.848 33.333 19.70 5.83 0.00 2.57
3224 4961 8.312896 ACTGAAAAGAAAACTAAGCTAGCTAC 57.687 34.615 19.70 4.12 0.00 3.58
3225 4962 8.904099 AACTGAAAAGAAAACTAAGCTAGCTA 57.096 30.769 19.70 5.71 0.00 3.32
3226 4963 7.809546 AACTGAAAAGAAAACTAAGCTAGCT 57.190 32.000 12.68 12.68 0.00 3.32
3227 4964 7.746916 GCTAACTGAAAAGAAAACTAAGCTAGC 59.253 37.037 6.62 6.62 0.00 3.42
3228 4965 8.774586 TGCTAACTGAAAAGAAAACTAAGCTAG 58.225 33.333 0.00 0.00 0.00 3.42
3229 4966 8.671384 TGCTAACTGAAAAGAAAACTAAGCTA 57.329 30.769 0.00 0.00 0.00 3.32
3230 4967 7.568199 TGCTAACTGAAAAGAAAACTAAGCT 57.432 32.000 0.00 0.00 0.00 3.74
3231 4968 8.628882 TTTGCTAACTGAAAAGAAAACTAAGC 57.371 30.769 0.00 0.00 0.00 3.09
3267 5004 1.595328 TGTACATGCACACGTTGACAC 59.405 47.619 0.00 0.00 0.00 3.67
3287 5024 2.285069 TACCGGGCCACATCCAGT 60.285 61.111 6.32 0.00 0.00 4.00
3339 5076 5.904984 TGGTATCCCATGCATTACTAACT 57.095 39.130 0.00 0.00 35.17 2.24
3359 5096 4.175489 GTGCGCTGCTCTGCATGG 62.175 66.667 9.73 0.00 43.96 3.66
3465 5202 0.465097 AAGATGAGGCATGGGCGAAG 60.465 55.000 0.00 0.00 42.47 3.79
3466 5203 0.749091 CAAGATGAGGCATGGGCGAA 60.749 55.000 0.00 0.00 42.47 4.70
3467 5204 1.153107 CAAGATGAGGCATGGGCGA 60.153 57.895 0.00 0.00 42.47 5.54
3468 5205 1.442526 GACAAGATGAGGCATGGGCG 61.443 60.000 0.00 0.00 42.47 6.13
3469 5206 1.442526 CGACAAGATGAGGCATGGGC 61.443 60.000 0.00 0.00 40.13 5.36
3470 5207 0.178767 TCGACAAGATGAGGCATGGG 59.821 55.000 0.00 0.00 0.00 4.00
3471 5208 1.134580 ACTCGACAAGATGAGGCATGG 60.135 52.381 0.00 0.00 36.53 3.66
3472 5209 1.931841 CACTCGACAAGATGAGGCATG 59.068 52.381 0.00 0.00 36.53 4.06
3473 5210 1.134580 CCACTCGACAAGATGAGGCAT 60.135 52.381 0.00 0.00 36.53 4.40
3474 5211 0.247460 CCACTCGACAAGATGAGGCA 59.753 55.000 0.00 0.00 36.53 4.75
3475 5212 1.086634 GCCACTCGACAAGATGAGGC 61.087 60.000 0.00 0.00 36.53 4.70
3476 5213 0.460987 GGCCACTCGACAAGATGAGG 60.461 60.000 0.00 0.00 36.53 3.86
3477 5214 0.247460 TGGCCACTCGACAAGATGAG 59.753 55.000 0.00 0.00 38.21 2.90
3478 5215 0.247460 CTGGCCACTCGACAAGATGA 59.753 55.000 0.00 0.00 0.00 2.92
3479 5216 0.036952 ACTGGCCACTCGACAAGATG 60.037 55.000 0.00 0.00 0.00 2.90
3480 5217 0.036952 CACTGGCCACTCGACAAGAT 60.037 55.000 0.00 0.00 0.00 2.40
3481 5218 1.367471 CACTGGCCACTCGACAAGA 59.633 57.895 0.00 0.00 0.00 3.02
3482 5219 1.669115 CCACTGGCCACTCGACAAG 60.669 63.158 0.00 0.00 0.00 3.16
3483 5220 2.425592 CCACTGGCCACTCGACAA 59.574 61.111 0.00 0.00 0.00 3.18
3484 5221 3.625897 CCCACTGGCCACTCGACA 61.626 66.667 0.00 0.00 0.00 4.35
3506 5243 0.911769 TGATTACAGGCCTCAGTGGG 59.088 55.000 0.00 0.00 36.00 4.61
3507 5244 1.833630 TCTGATTACAGGCCTCAGTGG 59.166 52.381 16.21 2.37 43.60 4.00
3508 5245 2.898705 GTCTGATTACAGGCCTCAGTG 58.101 52.381 16.21 3.66 42.25 3.66
3520 5257 9.085250 CGCGTCTATCTATAAGTAGTCTGATTA 57.915 37.037 0.00 0.00 0.00 1.75
3521 5258 7.603404 ACGCGTCTATCTATAAGTAGTCTGATT 59.397 37.037 5.58 0.00 0.00 2.57
3522 5259 7.063662 CACGCGTCTATCTATAAGTAGTCTGAT 59.936 40.741 9.86 0.00 0.00 2.90
3523 5260 6.365518 CACGCGTCTATCTATAAGTAGTCTGA 59.634 42.308 9.86 0.00 0.00 3.27
3524 5261 6.145858 ACACGCGTCTATCTATAAGTAGTCTG 59.854 42.308 9.86 0.00 0.00 3.51
3525 5262 6.145858 CACACGCGTCTATCTATAAGTAGTCT 59.854 42.308 9.86 0.00 0.00 3.24
3526 5263 6.073873 ACACACGCGTCTATCTATAAGTAGTC 60.074 42.308 9.86 0.00 0.00 2.59
3527 5264 5.757320 ACACACGCGTCTATCTATAAGTAGT 59.243 40.000 9.86 0.00 0.00 2.73
3528 5265 6.072098 CACACACGCGTCTATCTATAAGTAG 58.928 44.000 9.86 0.00 0.00 2.57
3529 5266 5.049886 CCACACACGCGTCTATCTATAAGTA 60.050 44.000 9.86 0.00 0.00 2.24
3530 5267 4.261072 CCACACACGCGTCTATCTATAAGT 60.261 45.833 9.86 0.00 0.00 2.24
3531 5268 4.219802 CCACACACGCGTCTATCTATAAG 58.780 47.826 9.86 0.00 0.00 1.73
3532 5269 3.004002 CCCACACACGCGTCTATCTATAA 59.996 47.826 9.86 0.00 0.00 0.98
3533 5270 2.551032 CCCACACACGCGTCTATCTATA 59.449 50.000 9.86 0.00 0.00 1.31
3534 5271 1.337071 CCCACACACGCGTCTATCTAT 59.663 52.381 9.86 0.00 0.00 1.98
3535 5272 0.736636 CCCACACACGCGTCTATCTA 59.263 55.000 9.86 0.00 0.00 1.98
3536 5273 1.511305 CCCACACACGCGTCTATCT 59.489 57.895 9.86 0.00 0.00 1.98
3537 5274 1.518572 CCCCACACACGCGTCTATC 60.519 63.158 9.86 0.00 0.00 2.08
3538 5275 0.966875 TACCCCACACACGCGTCTAT 60.967 55.000 9.86 0.00 0.00 1.98
3539 5276 1.177895 TTACCCCACACACGCGTCTA 61.178 55.000 9.86 0.00 0.00 2.59
3540 5277 2.430382 CTTACCCCACACACGCGTCT 62.430 60.000 9.86 0.00 0.00 4.18
3541 5278 2.025418 CTTACCCCACACACGCGTC 61.025 63.158 9.86 0.00 0.00 5.19
3542 5279 2.029964 CTTACCCCACACACGCGT 59.970 61.111 5.58 5.58 0.00 6.01
3543 5280 2.740826 CCTTACCCCACACACGCG 60.741 66.667 3.53 3.53 0.00 6.01
3544 5281 2.359478 CCCTTACCCCACACACGC 60.359 66.667 0.00 0.00 0.00 5.34
3545 5282 2.359478 GCCCTTACCCCACACACG 60.359 66.667 0.00 0.00 0.00 4.49
3546 5283 2.035155 GGCCCTTACCCCACACAC 59.965 66.667 0.00 0.00 0.00 3.82
3547 5284 2.121689 AGGCCCTTACCCCACACA 60.122 61.111 0.00 0.00 0.00 3.72
3548 5285 2.076597 AACAGGCCCTTACCCCACAC 62.077 60.000 0.00 0.00 0.00 3.82
3549 5286 1.776710 AACAGGCCCTTACCCCACA 60.777 57.895 0.00 0.00 0.00 4.17
3550 5287 1.001269 GAACAGGCCCTTACCCCAC 60.001 63.158 0.00 0.00 0.00 4.61
3551 5288 1.151677 AGAACAGGCCCTTACCCCA 60.152 57.895 0.00 0.00 0.00 4.96
3552 5289 1.303282 CAGAACAGGCCCTTACCCC 59.697 63.158 0.00 0.00 0.00 4.95
3553 5290 1.378646 GCAGAACAGGCCCTTACCC 60.379 63.158 0.00 0.00 0.00 3.69
3554 5291 0.251165 TTGCAGAACAGGCCCTTACC 60.251 55.000 0.00 0.00 0.00 2.85
3555 5292 0.881796 GTTGCAGAACAGGCCCTTAC 59.118 55.000 0.00 0.00 31.78 2.34
3556 5293 0.605319 CGTTGCAGAACAGGCCCTTA 60.605 55.000 0.00 0.00 31.78 2.69
3557 5294 1.898574 CGTTGCAGAACAGGCCCTT 60.899 57.895 0.00 0.00 31.78 3.95
3558 5295 2.281761 CGTTGCAGAACAGGCCCT 60.282 61.111 0.00 0.00 31.78 5.19
3559 5296 2.130073 GAACGTTGCAGAACAGGCCC 62.130 60.000 5.00 0.00 31.78 5.80
3560 5297 1.282875 GAACGTTGCAGAACAGGCC 59.717 57.895 5.00 0.00 31.78 5.19
3561 5298 1.282875 GGAACGTTGCAGAACAGGC 59.717 57.895 15.52 0.00 31.78 4.85
3562 5299 2.701587 TGGAACGTTGCAGAACAGG 58.298 52.632 19.24 0.00 31.78 4.00
3569 5306 1.597854 CAGGAGCTGGAACGTTGCA 60.598 57.895 21.67 21.67 0.00 4.08
3570 5307 3.257933 CAGGAGCTGGAACGTTGC 58.742 61.111 13.47 13.47 0.00 4.17
3581 5318 0.729690 GAATTGACGAAGCCAGGAGC 59.270 55.000 0.00 0.00 44.25 4.70
3582 5319 1.339055 TGGAATTGACGAAGCCAGGAG 60.339 52.381 0.00 0.00 0.00 3.69
3583 5320 0.690192 TGGAATTGACGAAGCCAGGA 59.310 50.000 0.00 0.00 0.00 3.86
3584 5321 0.804989 GTGGAATTGACGAAGCCAGG 59.195 55.000 0.00 0.00 0.00 4.45
3585 5322 1.197721 GTGTGGAATTGACGAAGCCAG 59.802 52.381 0.00 0.00 0.00 4.85
3586 5323 1.234821 GTGTGGAATTGACGAAGCCA 58.765 50.000 0.00 0.00 0.00 4.75
3587 5324 1.234821 TGTGTGGAATTGACGAAGCC 58.765 50.000 0.00 0.00 0.00 4.35
3588 5325 2.483877 TCATGTGTGGAATTGACGAAGC 59.516 45.455 0.00 0.00 0.00 3.86
3589 5326 4.715896 CTTCATGTGTGGAATTGACGAAG 58.284 43.478 0.00 0.00 0.00 3.79
3590 5327 3.058293 GCTTCATGTGTGGAATTGACGAA 60.058 43.478 0.00 0.00 0.00 3.85
3591 5328 2.483877 GCTTCATGTGTGGAATTGACGA 59.516 45.455 0.00 0.00 0.00 4.20
3592 5329 2.485426 AGCTTCATGTGTGGAATTGACG 59.515 45.455 0.00 0.00 0.00 4.35
3593 5330 5.393962 GTTAGCTTCATGTGTGGAATTGAC 58.606 41.667 0.00 0.00 0.00 3.18
3594 5331 4.458989 GGTTAGCTTCATGTGTGGAATTGA 59.541 41.667 0.00 0.00 0.00 2.57
3595 5332 4.218200 TGGTTAGCTTCATGTGTGGAATTG 59.782 41.667 0.00 0.00 0.00 2.32
3596 5333 4.406456 TGGTTAGCTTCATGTGTGGAATT 58.594 39.130 0.00 0.00 0.00 2.17
3597 5334 4.012374 CTGGTTAGCTTCATGTGTGGAAT 58.988 43.478 0.00 0.00 0.00 3.01
3598 5335 3.072330 TCTGGTTAGCTTCATGTGTGGAA 59.928 43.478 0.00 0.00 0.00 3.53
3599 5336 2.637382 TCTGGTTAGCTTCATGTGTGGA 59.363 45.455 0.00 0.00 0.00 4.02
3600 5337 3.057969 TCTGGTTAGCTTCATGTGTGG 57.942 47.619 0.00 0.00 0.00 4.17
3601 5338 3.120546 CGTTCTGGTTAGCTTCATGTGTG 60.121 47.826 0.00 0.00 0.00 3.82
3602 5339 3.067106 CGTTCTGGTTAGCTTCATGTGT 58.933 45.455 0.00 0.00 0.00 3.72
3603 5340 2.159653 GCGTTCTGGTTAGCTTCATGTG 60.160 50.000 0.00 0.00 0.00 3.21
3604 5341 2.076863 GCGTTCTGGTTAGCTTCATGT 58.923 47.619 0.00 0.00 0.00 3.21
3605 5342 2.349886 GAGCGTTCTGGTTAGCTTCATG 59.650 50.000 0.00 0.00 40.39 3.07
3606 5343 2.234908 AGAGCGTTCTGGTTAGCTTCAT 59.765 45.455 0.00 0.00 40.39 2.57
3607 5344 1.618837 AGAGCGTTCTGGTTAGCTTCA 59.381 47.619 0.00 0.00 40.39 3.02
3608 5345 2.371910 AGAGCGTTCTGGTTAGCTTC 57.628 50.000 0.00 0.00 40.39 3.86
3609 5346 2.417515 GCTAGAGCGTTCTGGTTAGCTT 60.418 50.000 12.54 0.00 40.39 3.74
3610 5347 1.135333 GCTAGAGCGTTCTGGTTAGCT 59.865 52.381 12.54 0.00 43.33 3.32
3611 5348 1.562017 GCTAGAGCGTTCTGGTTAGC 58.438 55.000 12.54 8.95 34.62 3.09
3633 5370 4.378874 GGCTTCTCGATTTCCAACTTCTTG 60.379 45.833 0.00 0.00 0.00 3.02
3634 5371 3.753797 GGCTTCTCGATTTCCAACTTCTT 59.246 43.478 0.00 0.00 0.00 2.52
3635 5372 3.339141 GGCTTCTCGATTTCCAACTTCT 58.661 45.455 0.00 0.00 0.00 2.85
3636 5373 2.094417 CGGCTTCTCGATTTCCAACTTC 59.906 50.000 0.00 0.00 0.00 3.01
3637 5374 2.076863 CGGCTTCTCGATTTCCAACTT 58.923 47.619 0.00 0.00 0.00 2.66
3638 5375 1.275291 TCGGCTTCTCGATTTCCAACT 59.725 47.619 0.00 0.00 33.92 3.16
3639 5376 1.393883 GTCGGCTTCTCGATTTCCAAC 59.606 52.381 0.00 0.00 41.40 3.77
3640 5377 1.722011 GTCGGCTTCTCGATTTCCAA 58.278 50.000 0.00 0.00 41.40 3.53
3641 5378 0.457853 CGTCGGCTTCTCGATTTCCA 60.458 55.000 0.00 0.00 41.40 3.53
3642 5379 0.179145 TCGTCGGCTTCTCGATTTCC 60.179 55.000 0.00 0.00 41.40 3.13
3643 5380 0.915227 GTCGTCGGCTTCTCGATTTC 59.085 55.000 0.00 0.00 41.40 2.17
3644 5381 0.458025 GGTCGTCGGCTTCTCGATTT 60.458 55.000 0.00 0.00 41.40 2.17
3645 5382 1.139095 GGTCGTCGGCTTCTCGATT 59.861 57.895 0.00 0.00 41.40 3.34
3646 5383 1.749638 AGGTCGTCGGCTTCTCGAT 60.750 57.895 0.00 0.00 41.40 3.59
3647 5384 2.359602 AGGTCGTCGGCTTCTCGA 60.360 61.111 0.00 0.00 36.76 4.04
3648 5385 2.202492 CAGGTCGTCGGCTTCTCG 60.202 66.667 0.00 0.00 0.00 4.04
3649 5386 1.153997 GACAGGTCGTCGGCTTCTC 60.154 63.158 0.00 0.00 34.19 2.87
3650 5387 2.963371 GACAGGTCGTCGGCTTCT 59.037 61.111 0.00 0.00 34.19 2.85
3675 5412 4.098501 CAGCTTCACCAACTTCTCCTTTTT 59.901 41.667 0.00 0.00 0.00 1.94
3676 5413 3.633986 CAGCTTCACCAACTTCTCCTTTT 59.366 43.478 0.00 0.00 0.00 2.27
3677 5414 3.217626 CAGCTTCACCAACTTCTCCTTT 58.782 45.455 0.00 0.00 0.00 3.11
3678 5415 2.487986 CCAGCTTCACCAACTTCTCCTT 60.488 50.000 0.00 0.00 0.00 3.36
3679 5416 1.072965 CCAGCTTCACCAACTTCTCCT 59.927 52.381 0.00 0.00 0.00 3.69
3680 5417 1.202818 ACCAGCTTCACCAACTTCTCC 60.203 52.381 0.00 0.00 0.00 3.71
3681 5418 2.147150 GACCAGCTTCACCAACTTCTC 58.853 52.381 0.00 0.00 0.00 2.87
3682 5419 1.771255 AGACCAGCTTCACCAACTTCT 59.229 47.619 0.00 0.00 0.00 2.85
3683 5420 1.876156 CAGACCAGCTTCACCAACTTC 59.124 52.381 0.00 0.00 0.00 3.01
3684 5421 1.477558 CCAGACCAGCTTCACCAACTT 60.478 52.381 0.00 0.00 0.00 2.66
3685 5422 0.109342 CCAGACCAGCTTCACCAACT 59.891 55.000 0.00 0.00 0.00 3.16
3686 5423 0.108585 TCCAGACCAGCTTCACCAAC 59.891 55.000 0.00 0.00 0.00 3.77
3687 5424 1.003580 GATCCAGACCAGCTTCACCAA 59.996 52.381 0.00 0.00 0.00 3.67
3688 5425 0.615331 GATCCAGACCAGCTTCACCA 59.385 55.000 0.00 0.00 0.00 4.17
3689 5426 0.615331 TGATCCAGACCAGCTTCACC 59.385 55.000 0.00 0.00 0.00 4.02
3690 5427 1.552337 TCTGATCCAGACCAGCTTCAC 59.448 52.381 0.00 0.00 35.39 3.18
3691 5428 1.942776 TCTGATCCAGACCAGCTTCA 58.057 50.000 0.00 0.00 35.39 3.02
3692 5429 3.110447 GATCTGATCCAGACCAGCTTC 57.890 52.381 6.37 0.00 43.63 3.86
3703 5440 2.985896 TGGTTTTCACGGATCTGATCC 58.014 47.619 23.93 23.93 46.22 3.36
3704 5441 4.253685 TCTTGGTTTTCACGGATCTGATC 58.746 43.478 9.00 9.18 0.00 2.92
3705 5442 4.286297 TCTTGGTTTTCACGGATCTGAT 57.714 40.909 9.00 0.00 0.00 2.90
3706 5443 3.762407 TCTTGGTTTTCACGGATCTGA 57.238 42.857 9.00 0.00 0.00 3.27
3707 5444 3.815401 ACTTCTTGGTTTTCACGGATCTG 59.185 43.478 0.00 0.00 0.00 2.90
3708 5445 4.086706 ACTTCTTGGTTTTCACGGATCT 57.913 40.909 0.00 0.00 0.00 2.75
3709 5446 4.274950 TCAACTTCTTGGTTTTCACGGATC 59.725 41.667 0.00 0.00 0.00 3.36
3710 5447 4.204012 TCAACTTCTTGGTTTTCACGGAT 58.796 39.130 0.00 0.00 0.00 4.18
3711 5448 3.611970 TCAACTTCTTGGTTTTCACGGA 58.388 40.909 0.00 0.00 0.00 4.69
3712 5449 4.142469 ACTTCAACTTCTTGGTTTTCACGG 60.142 41.667 0.00 0.00 0.00 4.94
3713 5450 4.981794 ACTTCAACTTCTTGGTTTTCACG 58.018 39.130 0.00 0.00 0.00 4.35
3714 5451 6.386654 TCAACTTCAACTTCTTGGTTTTCAC 58.613 36.000 0.00 0.00 0.00 3.18
3715 5452 6.432783 TCTCAACTTCAACTTCTTGGTTTTCA 59.567 34.615 0.00 0.00 0.00 2.69
3716 5453 6.747739 GTCTCAACTTCAACTTCTTGGTTTTC 59.252 38.462 0.00 0.00 0.00 2.29
3717 5454 6.621613 GTCTCAACTTCAACTTCTTGGTTTT 58.378 36.000 0.00 0.00 0.00 2.43
3718 5455 5.163754 CGTCTCAACTTCAACTTCTTGGTTT 60.164 40.000 0.00 0.00 0.00 3.27
3719 5456 4.332819 CGTCTCAACTTCAACTTCTTGGTT 59.667 41.667 0.00 0.00 0.00 3.67
3720 5457 3.871594 CGTCTCAACTTCAACTTCTTGGT 59.128 43.478 0.00 0.00 0.00 3.67
3721 5458 4.119862 TCGTCTCAACTTCAACTTCTTGG 58.880 43.478 0.00 0.00 0.00 3.61
3722 5459 5.718649 TTCGTCTCAACTTCAACTTCTTG 57.281 39.130 0.00 0.00 0.00 3.02
3723 5460 6.927294 AATTCGTCTCAACTTCAACTTCTT 57.073 33.333 0.00 0.00 0.00 2.52
3724 5461 6.984474 TGTAATTCGTCTCAACTTCAACTTCT 59.016 34.615 0.00 0.00 0.00 2.85
3725 5462 7.064064 GTGTAATTCGTCTCAACTTCAACTTC 58.936 38.462 0.00 0.00 0.00 3.01
3726 5463 6.018180 GGTGTAATTCGTCTCAACTTCAACTT 60.018 38.462 0.00 0.00 0.00 2.66
3727 5464 5.465724 GGTGTAATTCGTCTCAACTTCAACT 59.534 40.000 0.00 0.00 0.00 3.16
3728 5465 5.235616 TGGTGTAATTCGTCTCAACTTCAAC 59.764 40.000 0.00 0.00 0.00 3.18
3729 5466 5.361427 TGGTGTAATTCGTCTCAACTTCAA 58.639 37.500 0.00 0.00 0.00 2.69
3730 5467 4.951254 TGGTGTAATTCGTCTCAACTTCA 58.049 39.130 0.00 0.00 0.00 3.02
3731 5468 4.389077 CCTGGTGTAATTCGTCTCAACTTC 59.611 45.833 0.00 0.00 0.00 3.01
3732 5469 4.202326 ACCTGGTGTAATTCGTCTCAACTT 60.202 41.667 0.00 0.00 0.00 2.66
3733 5470 3.323979 ACCTGGTGTAATTCGTCTCAACT 59.676 43.478 0.00 0.00 0.00 3.16
3734 5471 3.660865 ACCTGGTGTAATTCGTCTCAAC 58.339 45.455 0.00 0.00 0.00 3.18
3735 5472 4.062293 CAACCTGGTGTAATTCGTCTCAA 58.938 43.478 0.00 0.00 0.00 3.02
3736 5473 3.659786 CAACCTGGTGTAATTCGTCTCA 58.340 45.455 0.00 0.00 0.00 3.27
3737 5474 2.415512 GCAACCTGGTGTAATTCGTCTC 59.584 50.000 0.00 0.00 0.00 3.36
3738 5475 2.423577 GCAACCTGGTGTAATTCGTCT 58.576 47.619 0.00 0.00 0.00 4.18
3739 5476 1.467342 GGCAACCTGGTGTAATTCGTC 59.533 52.381 0.00 0.00 0.00 4.20
3740 5477 1.202830 TGGCAACCTGGTGTAATTCGT 60.203 47.619 0.00 0.00 0.00 3.85
3741 5478 1.529226 TGGCAACCTGGTGTAATTCG 58.471 50.000 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.