Multiple sequence alignment - TraesCS1D01G251400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G251400 chr1D 100.000 4109 0 0 1 4109 343884840 343888948 0.000000e+00 7589.0
1 TraesCS1D01G251400 chr1D 92.778 180 13 0 203 382 451246992 451247171 1.130000e-65 261.0
2 TraesCS1D01G251400 chr1D 89.130 184 17 2 199 382 466118434 466118254 4.130000e-55 226.0
3 TraesCS1D01G251400 chr1B 96.077 3416 63 22 728 4109 461295230 461298608 0.000000e+00 5500.0
4 TraesCS1D01G251400 chr1B 97.458 354 8 1 2589 2941 461236891 461237244 1.630000e-168 603.0
5 TraesCS1D01G251400 chr1B 91.197 284 18 5 454 731 461248505 461248787 3.000000e-101 379.0
6 TraesCS1D01G251400 chr1B 94.937 79 2 1 668 744 461236748 461236826 5.580000e-24 122.0
7 TraesCS1D01G251400 chr5D 89.916 238 19 4 3454 3687 257855807 257855571 6.680000e-78 302.0
8 TraesCS1D01G251400 chr5D 87.313 134 12 3 3195 3324 487497402 487497534 9.200000e-32 148.0
9 TraesCS1D01G251400 chr4B 89.831 236 22 1 3454 3687 328107842 328107607 6.680000e-78 302.0
10 TraesCS1D01G251400 chr4B 88.136 236 25 2 3454 3687 458456697 458456463 1.120000e-70 278.0
11 TraesCS1D01G251400 chr4D 89.700 233 22 1 3454 3684 40168234 40168466 3.110000e-76 296.0
12 TraesCS1D01G251400 chr4D 90.351 228 18 3 3460 3684 284102152 284102378 3.110000e-76 296.0
13 TraesCS1D01G251400 chr4D 88.793 232 22 2 3455 3684 362196457 362196686 8.700000e-72 281.0
14 TraesCS1D01G251400 chr4D 90.000 180 17 1 203 382 404405212 404405390 8.880000e-57 231.0
15 TraesCS1D01G251400 chr4D 89.011 182 20 0 201 382 12192469 12192288 4.130000e-55 226.0
16 TraesCS1D01G251400 chr7D 89.407 236 22 2 3451 3684 265000201 265000435 1.120000e-75 294.0
17 TraesCS1D01G251400 chr7D 92.265 181 14 0 202 382 633074795 633074975 1.470000e-64 257.0
18 TraesCS1D01G251400 chr7D 91.160 181 16 0 202 382 105927164 105927344 3.170000e-61 246.0
19 TraesCS1D01G251400 chr7D 85.987 157 19 1 3195 3348 264332265 264332421 9.140000e-37 165.0
20 TraesCS1D01G251400 chr3D 78.234 487 87 13 2618 3099 435293047 435292575 1.120000e-75 294.0
21 TraesCS1D01G251400 chr7B 88.750 240 23 3 3451 3687 464645388 464645150 1.440000e-74 291.0
22 TraesCS1D01G251400 chr7B 84.058 138 19 1 3195 3329 99137674 99137811 3.330000e-26 130.0
23 TraesCS1D01G251400 chr7B 85.870 92 13 0 1256 1347 709851000 709850909 9.400000e-17 99.0
24 TraesCS1D01G251400 chr7B 84.783 92 14 0 1256 1347 710730474 710730383 4.370000e-15 93.5
25 TraesCS1D01G251400 chr2D 93.407 182 12 0 201 382 564473696 564473515 1.880000e-68 270.0
26 TraesCS1D01G251400 chr2D 90.659 182 15 2 201 382 506786552 506786731 1.480000e-59 241.0
27 TraesCS1D01G251400 chr3A 77.254 488 91 14 2618 3100 574011354 574010882 6.770000e-68 268.0
28 TraesCS1D01G251400 chr6D 88.947 190 18 3 194 382 455306223 455306036 8.880000e-57 231.0
29 TraesCS1D01G251400 chr1A 88.235 170 12 3 3944 4109 443199032 443199197 3.240000e-46 196.0
30 TraesCS1D01G251400 chr2A 83.436 163 16 3 3196 3348 398458287 398458448 1.540000e-29 141.0
31 TraesCS1D01G251400 chr2A 83.436 163 16 3 3196 3348 398857286 398857125 1.540000e-29 141.0
32 TraesCS1D01G251400 chr6B 85.294 136 17 1 3192 3324 669052253 669052388 1.990000e-28 137.0
33 TraesCS1D01G251400 chr5B 85.185 135 15 3 3194 3324 656461337 656461470 2.580000e-27 134.0
34 TraesCS1D01G251400 chr2B 85.496 131 16 1 3197 3324 390812630 390812760 2.580000e-27 134.0
35 TraesCS1D01G251400 chr7A 84.783 92 14 0 1256 1347 709551650 709551559 4.370000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G251400 chr1D 343884840 343888948 4108 False 7589 7589 100.000 1 4109 1 chr1D.!!$F1 4108
1 TraesCS1D01G251400 chr1B 461295230 461298608 3378 False 5500 5500 96.077 728 4109 1 chr1B.!!$F2 3381

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
836 840 0.027979 CTTGCAATGTATGGCGTCGG 59.972 55.0 0.00 0.0 0.00 4.79 F
895 900 0.108585 AGCACACTGTGGGTAACTGG 59.891 55.0 12.28 0.0 33.64 4.00 F
897 902 0.472471 CACACTGTGGGTAACTGGGT 59.528 55.0 13.09 0.0 44.51 4.51 F
2605 2610 0.035439 CATAAACAGCGGGTCCAGGT 60.035 55.0 0.00 0.0 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1833 1838 1.153939 CTTGGAGTGGAGCGACTCG 60.154 63.158 6.57 0.0 42.97 4.18 R
1941 1946 2.047655 TTGTAGCGTCCCTTGCCG 60.048 61.111 0.00 0.0 0.00 5.69 R
2897 2902 1.612442 AGCCTCCACCGCTTCCTAA 60.612 57.895 0.00 0.0 30.57 2.69 R
3855 3890 1.379977 CTCGAGGACCTGCTACCCA 60.380 63.158 3.91 0.0 0.00 4.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.856222 GGAGACCCAGCCAGATATTTG 58.144 52.381 0.00 0.00 0.00 2.32
30 31 2.173569 GGAGACCCAGCCAGATATTTGT 59.826 50.000 0.00 0.00 0.00 2.83
31 32 3.372025 GGAGACCCAGCCAGATATTTGTT 60.372 47.826 0.00 0.00 0.00 2.83
32 33 4.273318 GAGACCCAGCCAGATATTTGTTT 58.727 43.478 0.00 0.00 0.00 2.83
33 34 4.273318 AGACCCAGCCAGATATTTGTTTC 58.727 43.478 0.00 0.00 0.00 2.78
34 35 4.018050 AGACCCAGCCAGATATTTGTTTCT 60.018 41.667 0.00 0.00 0.00 2.52
35 36 4.273318 ACCCAGCCAGATATTTGTTTCTC 58.727 43.478 0.00 0.00 0.00 2.87
36 37 4.018050 ACCCAGCCAGATATTTGTTTCTCT 60.018 41.667 0.00 0.00 0.00 3.10
37 38 4.952335 CCCAGCCAGATATTTGTTTCTCTT 59.048 41.667 0.00 0.00 0.00 2.85
38 39 5.420104 CCCAGCCAGATATTTGTTTCTCTTT 59.580 40.000 0.00 0.00 0.00 2.52
39 40 6.405176 CCCAGCCAGATATTTGTTTCTCTTTC 60.405 42.308 0.00 0.00 0.00 2.62
40 41 6.151648 CCAGCCAGATATTTGTTTCTCTTTCA 59.848 38.462 0.00 0.00 0.00 2.69
41 42 7.249147 CAGCCAGATATTTGTTTCTCTTTCAG 58.751 38.462 0.00 0.00 0.00 3.02
42 43 6.944862 AGCCAGATATTTGTTTCTCTTTCAGT 59.055 34.615 0.00 0.00 0.00 3.41
43 44 8.103305 AGCCAGATATTTGTTTCTCTTTCAGTA 58.897 33.333 0.00 0.00 0.00 2.74
44 45 8.730680 GCCAGATATTTGTTTCTCTTTCAGTAA 58.269 33.333 0.00 0.00 0.00 2.24
51 52 9.914131 ATTTGTTTCTCTTTCAGTAAAATAGCC 57.086 29.630 0.00 0.00 0.00 3.93
52 53 8.458573 TTGTTTCTCTTTCAGTAAAATAGCCA 57.541 30.769 0.00 0.00 0.00 4.75
53 54 7.871853 TGTTTCTCTTTCAGTAAAATAGCCAC 58.128 34.615 0.00 0.00 0.00 5.01
54 55 7.040686 TGTTTCTCTTTCAGTAAAATAGCCACC 60.041 37.037 0.00 0.00 0.00 4.61
55 56 5.175859 TCTCTTTCAGTAAAATAGCCACCG 58.824 41.667 0.00 0.00 0.00 4.94
56 57 4.901868 TCTTTCAGTAAAATAGCCACCGT 58.098 39.130 0.00 0.00 0.00 4.83
57 58 4.693566 TCTTTCAGTAAAATAGCCACCGTG 59.306 41.667 0.00 0.00 0.00 4.94
58 59 3.965379 TCAGTAAAATAGCCACCGTGA 57.035 42.857 0.00 0.00 0.00 4.35
59 60 3.857052 TCAGTAAAATAGCCACCGTGAG 58.143 45.455 0.00 0.00 0.00 3.51
60 61 3.259876 TCAGTAAAATAGCCACCGTGAGT 59.740 43.478 0.00 0.00 0.00 3.41
61 62 3.370978 CAGTAAAATAGCCACCGTGAGTG 59.629 47.826 0.00 0.00 46.83 3.51
69 70 3.073086 CACCGTGAGTGGTTGTTGA 57.927 52.632 0.00 0.00 41.38 3.18
70 71 0.655733 CACCGTGAGTGGTTGTTGAC 59.344 55.000 0.00 0.00 41.38 3.18
71 72 0.539986 ACCGTGAGTGGTTGTTGACT 59.460 50.000 0.00 0.00 39.99 3.41
72 73 1.065709 ACCGTGAGTGGTTGTTGACTT 60.066 47.619 0.00 0.00 39.99 3.01
73 74 1.330521 CCGTGAGTGGTTGTTGACTTG 59.669 52.381 0.00 0.00 0.00 3.16
74 75 2.006888 CGTGAGTGGTTGTTGACTTGT 58.993 47.619 0.00 0.00 0.00 3.16
75 76 2.418628 CGTGAGTGGTTGTTGACTTGTT 59.581 45.455 0.00 0.00 0.00 2.83
76 77 3.727673 CGTGAGTGGTTGTTGACTTGTTG 60.728 47.826 0.00 0.00 0.00 3.33
77 78 3.190535 GTGAGTGGTTGTTGACTTGTTGT 59.809 43.478 0.00 0.00 0.00 3.32
78 79 3.190327 TGAGTGGTTGTTGACTTGTTGTG 59.810 43.478 0.00 0.00 0.00 3.33
79 80 3.417101 AGTGGTTGTTGACTTGTTGTGA 58.583 40.909 0.00 0.00 0.00 3.58
80 81 3.190535 AGTGGTTGTTGACTTGTTGTGAC 59.809 43.478 0.00 0.00 0.00 3.67
81 82 2.490115 TGGTTGTTGACTTGTTGTGACC 59.510 45.455 0.00 0.00 0.00 4.02
82 83 2.477189 GGTTGTTGACTTGTTGTGACCG 60.477 50.000 0.00 0.00 0.00 4.79
83 84 2.388310 TGTTGACTTGTTGTGACCGA 57.612 45.000 0.00 0.00 0.00 4.69
84 85 2.701107 TGTTGACTTGTTGTGACCGAA 58.299 42.857 0.00 0.00 0.00 4.30
85 86 3.275143 TGTTGACTTGTTGTGACCGAAT 58.725 40.909 0.00 0.00 0.00 3.34
86 87 3.064682 TGTTGACTTGTTGTGACCGAATG 59.935 43.478 0.00 0.00 0.00 2.67
87 88 3.186702 TGACTTGTTGTGACCGAATGA 57.813 42.857 0.00 0.00 0.00 2.57
88 89 3.130633 TGACTTGTTGTGACCGAATGAG 58.869 45.455 0.00 0.00 0.00 2.90
89 90 3.181470 TGACTTGTTGTGACCGAATGAGA 60.181 43.478 0.00 0.00 0.00 3.27
90 91 3.393800 ACTTGTTGTGACCGAATGAGAG 58.606 45.455 0.00 0.00 0.00 3.20
91 92 3.181465 ACTTGTTGTGACCGAATGAGAGT 60.181 43.478 0.00 0.00 0.00 3.24
92 93 2.754472 TGTTGTGACCGAATGAGAGTG 58.246 47.619 0.00 0.00 0.00 3.51
93 94 2.364002 TGTTGTGACCGAATGAGAGTGA 59.636 45.455 0.00 0.00 0.00 3.41
94 95 3.181470 TGTTGTGACCGAATGAGAGTGAA 60.181 43.478 0.00 0.00 0.00 3.18
95 96 3.744238 TGTGACCGAATGAGAGTGAAA 57.256 42.857 0.00 0.00 0.00 2.69
96 97 4.066646 TGTGACCGAATGAGAGTGAAAA 57.933 40.909 0.00 0.00 0.00 2.29
97 98 4.447290 TGTGACCGAATGAGAGTGAAAAA 58.553 39.130 0.00 0.00 0.00 1.94
98 99 4.511454 TGTGACCGAATGAGAGTGAAAAAG 59.489 41.667 0.00 0.00 0.00 2.27
99 100 4.065088 TGACCGAATGAGAGTGAAAAAGG 58.935 43.478 0.00 0.00 0.00 3.11
100 101 2.814336 ACCGAATGAGAGTGAAAAAGGC 59.186 45.455 0.00 0.00 0.00 4.35
101 102 2.813754 CCGAATGAGAGTGAAAAAGGCA 59.186 45.455 0.00 0.00 0.00 4.75
102 103 3.441572 CCGAATGAGAGTGAAAAAGGCAT 59.558 43.478 0.00 0.00 0.00 4.40
103 104 4.437930 CCGAATGAGAGTGAAAAAGGCATC 60.438 45.833 0.00 0.00 0.00 3.91
104 105 4.437930 CGAATGAGAGTGAAAAAGGCATCC 60.438 45.833 0.00 0.00 0.00 3.51
105 106 3.795688 TGAGAGTGAAAAAGGCATCCT 57.204 42.857 0.00 0.00 33.87 3.24
106 107 4.908601 TGAGAGTGAAAAAGGCATCCTA 57.091 40.909 0.00 0.00 31.13 2.94
107 108 4.836825 TGAGAGTGAAAAAGGCATCCTAG 58.163 43.478 0.00 0.00 31.13 3.02
108 109 4.532126 TGAGAGTGAAAAAGGCATCCTAGA 59.468 41.667 0.00 0.00 31.13 2.43
109 110 5.190528 TGAGAGTGAAAAAGGCATCCTAGAT 59.809 40.000 0.00 0.00 31.13 1.98
110 111 6.072199 AGAGTGAAAAAGGCATCCTAGATT 57.928 37.500 0.00 0.00 31.13 2.40
111 112 6.488715 AGAGTGAAAAAGGCATCCTAGATTT 58.511 36.000 0.00 0.00 31.13 2.17
112 113 6.950619 AGAGTGAAAAAGGCATCCTAGATTTT 59.049 34.615 0.00 0.00 31.13 1.82
113 114 6.928520 AGTGAAAAAGGCATCCTAGATTTTG 58.071 36.000 0.00 0.00 31.13 2.44
114 115 6.071165 AGTGAAAAAGGCATCCTAGATTTTGG 60.071 38.462 0.00 0.00 31.13 3.28
115 116 5.187576 TGAAAAAGGCATCCTAGATTTTGGG 59.812 40.000 0.00 0.00 31.13 4.12
116 117 4.608170 AAAGGCATCCTAGATTTTGGGA 57.392 40.909 0.00 0.00 31.13 4.37
117 118 4.821532 AAGGCATCCTAGATTTTGGGAT 57.178 40.909 0.00 0.00 40.10 3.85
118 119 4.821532 AGGCATCCTAGATTTTGGGATT 57.178 40.909 0.00 0.00 37.72 3.01
119 120 4.477249 AGGCATCCTAGATTTTGGGATTG 58.523 43.478 0.00 0.00 37.72 2.67
120 121 3.006217 GGCATCCTAGATTTTGGGATTGC 59.994 47.826 0.00 0.00 37.72 3.56
121 122 3.638160 GCATCCTAGATTTTGGGATTGCA 59.362 43.478 0.00 0.00 37.72 4.08
122 123 4.500375 GCATCCTAGATTTTGGGATTGCAC 60.500 45.833 0.00 0.00 37.72 4.57
123 124 3.278574 TCCTAGATTTTGGGATTGCACG 58.721 45.455 0.00 0.00 0.00 5.34
124 125 2.223572 CCTAGATTTTGGGATTGCACGC 60.224 50.000 0.00 0.00 0.00 5.34
125 126 1.255882 AGATTTTGGGATTGCACGCA 58.744 45.000 0.00 0.00 0.00 5.24
126 127 1.617850 AGATTTTGGGATTGCACGCAA 59.382 42.857 6.95 6.95 40.05 4.85
127 128 2.036992 AGATTTTGGGATTGCACGCAAA 59.963 40.909 8.76 13.39 45.77 3.68
129 130 1.863267 TTTGGGATTGCACGCAAAAG 58.137 45.000 14.58 0.00 44.97 2.27
130 131 0.749649 TTGGGATTGCACGCAAAAGT 59.250 45.000 8.76 0.00 39.16 2.66
131 132 0.749649 TGGGATTGCACGCAAAAGTT 59.250 45.000 8.76 0.00 39.55 2.66
132 133 1.957177 TGGGATTGCACGCAAAAGTTA 59.043 42.857 8.76 0.00 39.55 2.24
133 134 2.030363 TGGGATTGCACGCAAAAGTTAG 60.030 45.455 8.76 0.00 39.55 2.34
134 135 2.030274 GGGATTGCACGCAAAAGTTAGT 60.030 45.455 8.76 0.00 39.55 2.24
135 136 3.189702 GGGATTGCACGCAAAAGTTAGTA 59.810 43.478 8.76 0.00 39.55 1.82
136 137 4.156182 GGATTGCACGCAAAAGTTAGTAC 58.844 43.478 8.76 0.00 39.55 2.73
137 138 4.319911 GGATTGCACGCAAAAGTTAGTACA 60.320 41.667 8.76 0.00 39.55 2.90
138 139 4.822036 TTGCACGCAAAAGTTAGTACAT 57.178 36.364 1.07 0.00 32.44 2.29
139 140 4.398549 TGCACGCAAAAGTTAGTACATC 57.601 40.909 0.00 0.00 0.00 3.06
140 141 3.187637 TGCACGCAAAAGTTAGTACATCC 59.812 43.478 0.00 0.00 0.00 3.51
141 142 3.187637 GCACGCAAAAGTTAGTACATCCA 59.812 43.478 0.00 0.00 0.00 3.41
142 143 4.319911 GCACGCAAAAGTTAGTACATCCAA 60.320 41.667 0.00 0.00 0.00 3.53
143 144 5.144359 CACGCAAAAGTTAGTACATCCAAC 58.856 41.667 0.00 0.00 0.00 3.77
144 145 4.817464 ACGCAAAAGTTAGTACATCCAACA 59.183 37.500 0.00 0.00 0.00 3.33
145 146 5.472137 ACGCAAAAGTTAGTACATCCAACAT 59.528 36.000 0.00 0.00 0.00 2.71
146 147 6.016610 ACGCAAAAGTTAGTACATCCAACATT 60.017 34.615 0.00 0.00 0.00 2.71
147 148 6.861055 CGCAAAAGTTAGTACATCCAACATTT 59.139 34.615 0.00 0.00 0.00 2.32
148 149 7.381139 CGCAAAAGTTAGTACATCCAACATTTT 59.619 33.333 0.00 1.47 0.00 1.82
149 150 9.685828 GCAAAAGTTAGTACATCCAACATTTTA 57.314 29.630 0.00 0.00 0.00 1.52
157 158 8.567285 AGTACATCCAACATTTTAGAAAGGAG 57.433 34.615 0.00 0.00 0.00 3.69
158 159 6.840780 ACATCCAACATTTTAGAAAGGAGG 57.159 37.500 0.00 0.00 0.00 4.30
159 160 5.716703 ACATCCAACATTTTAGAAAGGAGGG 59.283 40.000 0.00 0.00 30.41 4.30
160 161 5.592587 TCCAACATTTTAGAAAGGAGGGA 57.407 39.130 0.00 0.00 0.00 4.20
161 162 5.570320 TCCAACATTTTAGAAAGGAGGGAG 58.430 41.667 0.00 0.00 0.00 4.30
162 163 5.074515 TCCAACATTTTAGAAAGGAGGGAGT 59.925 40.000 0.00 0.00 0.00 3.85
163 164 6.273730 TCCAACATTTTAGAAAGGAGGGAGTA 59.726 38.462 0.00 0.00 0.00 2.59
164 165 6.599638 CCAACATTTTAGAAAGGAGGGAGTAG 59.400 42.308 0.00 0.00 0.00 2.57
165 166 6.954352 ACATTTTAGAAAGGAGGGAGTAGT 57.046 37.500 0.00 0.00 0.00 2.73
166 167 7.331089 ACATTTTAGAAAGGAGGGAGTAGTT 57.669 36.000 0.00 0.00 0.00 2.24
167 168 7.756614 ACATTTTAGAAAGGAGGGAGTAGTTT 58.243 34.615 0.00 0.00 0.00 2.66
168 169 7.665974 ACATTTTAGAAAGGAGGGAGTAGTTTG 59.334 37.037 0.00 0.00 0.00 2.93
169 170 7.383156 TTTTAGAAAGGAGGGAGTAGTTTGA 57.617 36.000 0.00 0.00 0.00 2.69
170 171 7.383156 TTTAGAAAGGAGGGAGTAGTTTGAA 57.617 36.000 0.00 0.00 0.00 2.69
171 172 5.906772 AGAAAGGAGGGAGTAGTTTGAAA 57.093 39.130 0.00 0.00 0.00 2.69
172 173 6.262056 AGAAAGGAGGGAGTAGTTTGAAAA 57.738 37.500 0.00 0.00 0.00 2.29
173 174 6.669631 AGAAAGGAGGGAGTAGTTTGAAAAA 58.330 36.000 0.00 0.00 0.00 1.94
174 175 7.298374 AGAAAGGAGGGAGTAGTTTGAAAAAT 58.702 34.615 0.00 0.00 0.00 1.82
175 176 7.448777 AGAAAGGAGGGAGTAGTTTGAAAAATC 59.551 37.037 0.00 0.00 0.00 2.17
176 177 6.200878 AGGAGGGAGTAGTTTGAAAAATCA 57.799 37.500 0.00 0.00 0.00 2.57
177 178 6.794534 AGGAGGGAGTAGTTTGAAAAATCAT 58.205 36.000 0.00 0.00 0.00 2.45
178 179 6.887002 AGGAGGGAGTAGTTTGAAAAATCATC 59.113 38.462 0.00 0.00 0.00 2.92
179 180 6.887002 GGAGGGAGTAGTTTGAAAAATCATCT 59.113 38.462 0.00 0.00 0.00 2.90
180 181 7.394641 GGAGGGAGTAGTTTGAAAAATCATCTT 59.605 37.037 0.00 0.00 0.00 2.40
181 182 9.449719 GAGGGAGTAGTTTGAAAAATCATCTTA 57.550 33.333 0.00 0.00 0.00 2.10
182 183 9.981460 AGGGAGTAGTTTGAAAAATCATCTTAT 57.019 29.630 0.00 0.00 0.00 1.73
226 227 5.467035 TTTTTGCGGATGAAAGGAAGATT 57.533 34.783 0.00 0.00 0.00 2.40
227 228 5.467035 TTTTGCGGATGAAAGGAAGATTT 57.533 34.783 0.00 0.00 0.00 2.17
228 229 5.467035 TTTGCGGATGAAAGGAAGATTTT 57.533 34.783 0.00 0.00 0.00 1.82
229 230 6.582677 TTTGCGGATGAAAGGAAGATTTTA 57.417 33.333 0.00 0.00 0.00 1.52
230 231 6.582677 TTGCGGATGAAAGGAAGATTTTAA 57.417 33.333 0.00 0.00 0.00 1.52
231 232 6.773976 TGCGGATGAAAGGAAGATTTTAAT 57.226 33.333 0.00 0.00 0.00 1.40
232 233 7.169158 TGCGGATGAAAGGAAGATTTTAATT 57.831 32.000 0.00 0.00 0.00 1.40
233 234 7.257722 TGCGGATGAAAGGAAGATTTTAATTC 58.742 34.615 0.00 0.00 0.00 2.17
234 235 7.093988 TGCGGATGAAAGGAAGATTTTAATTCA 60.094 33.333 0.00 0.00 0.00 2.57
235 236 7.922811 GCGGATGAAAGGAAGATTTTAATTCAT 59.077 33.333 0.00 0.00 38.38 2.57
236 237 9.455847 CGGATGAAAGGAAGATTTTAATTCATC 57.544 33.333 14.15 14.15 45.36 2.92
244 245 9.705103 AGGAAGATTTTAATTCATCAATCAGGA 57.295 29.630 0.00 0.00 0.00 3.86
245 246 9.741647 GGAAGATTTTAATTCATCAATCAGGAC 57.258 33.333 0.00 0.00 0.00 3.85
253 254 9.904198 TTAATTCATCAATCAGGACATAAGTCA 57.096 29.630 0.00 0.00 46.80 3.41
254 255 8.991783 AATTCATCAATCAGGACATAAGTCAT 57.008 30.769 0.00 0.00 46.80 3.06
255 256 8.991783 ATTCATCAATCAGGACATAAGTCATT 57.008 30.769 0.00 0.00 46.80 2.57
256 257 8.442632 TTCATCAATCAGGACATAAGTCATTC 57.557 34.615 0.00 0.00 46.80 2.67
257 258 7.799081 TCATCAATCAGGACATAAGTCATTCT 58.201 34.615 0.00 0.00 46.80 2.40
258 259 8.270030 TCATCAATCAGGACATAAGTCATTCTT 58.730 33.333 0.00 0.00 46.80 2.52
259 260 9.551734 CATCAATCAGGACATAAGTCATTCTTA 57.448 33.333 0.00 0.00 46.80 2.10
260 261 8.948631 TCAATCAGGACATAAGTCATTCTTAC 57.051 34.615 0.00 0.00 46.80 2.34
261 262 8.539544 TCAATCAGGACATAAGTCATTCTTACA 58.460 33.333 0.00 0.00 46.80 2.41
262 263 9.166173 CAATCAGGACATAAGTCATTCTTACAA 57.834 33.333 0.00 0.00 46.80 2.41
263 264 9.739276 AATCAGGACATAAGTCATTCTTACAAA 57.261 29.630 0.00 0.00 46.80 2.83
264 265 9.911788 ATCAGGACATAAGTCATTCTTACAAAT 57.088 29.630 0.00 0.00 46.80 2.32
274 275 8.412608 AGTCATTCTTACAAATATCAGTGACG 57.587 34.615 0.00 0.00 37.79 4.35
275 276 8.035394 AGTCATTCTTACAAATATCAGTGACGT 58.965 33.333 0.00 0.00 37.79 4.34
276 277 8.321716 GTCATTCTTACAAATATCAGTGACGTC 58.678 37.037 9.11 9.11 0.00 4.34
277 278 8.251026 TCATTCTTACAAATATCAGTGACGTCT 58.749 33.333 17.92 0.00 0.00 4.18
278 279 8.535592 CATTCTTACAAATATCAGTGACGTCTC 58.464 37.037 17.92 13.63 0.00 3.36
279 280 6.561614 TCTTACAAATATCAGTGACGTCTCC 58.438 40.000 17.92 7.40 0.00 3.71
280 281 6.377429 TCTTACAAATATCAGTGACGTCTCCT 59.623 38.462 17.92 9.73 0.00 3.69
281 282 4.748892 ACAAATATCAGTGACGTCTCCTG 58.251 43.478 22.17 22.17 0.00 3.86
282 283 4.115516 CAAATATCAGTGACGTCTCCTGG 58.884 47.826 25.38 13.01 0.00 4.45
283 284 2.509166 TATCAGTGACGTCTCCTGGT 57.491 50.000 25.38 22.92 0.00 4.00
284 285 1.178276 ATCAGTGACGTCTCCTGGTC 58.822 55.000 25.38 7.41 0.00 4.02
285 286 0.894184 TCAGTGACGTCTCCTGGTCC 60.894 60.000 25.38 0.00 32.19 4.46
286 287 1.606889 AGTGACGTCTCCTGGTCCC 60.607 63.158 17.92 0.00 32.19 4.46
287 288 2.675423 TGACGTCTCCTGGTCCCG 60.675 66.667 17.92 0.00 32.19 5.14
288 289 2.360852 GACGTCTCCTGGTCCCGA 60.361 66.667 8.70 0.00 0.00 5.14
289 290 1.975407 GACGTCTCCTGGTCCCGAA 60.975 63.158 8.70 0.00 0.00 4.30
290 291 2.210341 GACGTCTCCTGGTCCCGAAC 62.210 65.000 8.70 0.00 0.00 3.95
299 300 2.060370 GGTCCCGAACCTAACCACA 58.940 57.895 0.14 0.00 45.45 4.17
300 301 0.321034 GGTCCCGAACCTAACCACAC 60.321 60.000 0.14 0.00 45.45 3.82
301 302 0.321034 GTCCCGAACCTAACCACACC 60.321 60.000 0.00 0.00 0.00 4.16
302 303 0.763604 TCCCGAACCTAACCACACCA 60.764 55.000 0.00 0.00 0.00 4.17
303 304 0.604511 CCCGAACCTAACCACACCAC 60.605 60.000 0.00 0.00 0.00 4.16
304 305 0.107081 CCGAACCTAACCACACCACA 59.893 55.000 0.00 0.00 0.00 4.17
305 306 1.508632 CGAACCTAACCACACCACAG 58.491 55.000 0.00 0.00 0.00 3.66
306 307 1.202604 CGAACCTAACCACACCACAGT 60.203 52.381 0.00 0.00 0.00 3.55
316 317 2.032981 CACCACAGTGCAACCTTCC 58.967 57.895 0.00 0.00 37.80 3.46
317 318 1.525995 ACCACAGTGCAACCTTCCG 60.526 57.895 0.00 0.00 37.80 4.30
318 319 1.525995 CCACAGTGCAACCTTCCGT 60.526 57.895 0.00 0.00 37.80 4.69
319 320 1.507141 CCACAGTGCAACCTTCCGTC 61.507 60.000 0.00 0.00 37.80 4.79
320 321 1.227853 ACAGTGCAACCTTCCGTCC 60.228 57.895 0.00 0.00 37.80 4.79
321 322 2.030562 AGTGCAACCTTCCGTCCG 59.969 61.111 0.00 0.00 37.80 4.79
322 323 2.280592 GTGCAACCTTCCGTCCGT 60.281 61.111 0.00 0.00 0.00 4.69
323 324 2.029964 TGCAACCTTCCGTCCGTC 59.970 61.111 0.00 0.00 0.00 4.79
324 325 2.342648 GCAACCTTCCGTCCGTCT 59.657 61.111 0.00 0.00 0.00 4.18
325 326 1.180456 TGCAACCTTCCGTCCGTCTA 61.180 55.000 0.00 0.00 0.00 2.59
326 327 0.037975 GCAACCTTCCGTCCGTCTAA 60.038 55.000 0.00 0.00 0.00 2.10
327 328 1.606224 GCAACCTTCCGTCCGTCTAAA 60.606 52.381 0.00 0.00 0.00 1.85
328 329 2.334838 CAACCTTCCGTCCGTCTAAAG 58.665 52.381 0.00 0.00 0.00 1.85
329 330 1.915141 ACCTTCCGTCCGTCTAAAGA 58.085 50.000 0.00 0.00 0.00 2.52
330 331 2.242043 ACCTTCCGTCCGTCTAAAGAA 58.758 47.619 0.00 0.00 0.00 2.52
331 332 2.230750 ACCTTCCGTCCGTCTAAAGAAG 59.769 50.000 0.00 0.00 0.00 2.85
332 333 2.416972 CCTTCCGTCCGTCTAAAGAAGG 60.417 54.545 5.68 5.68 43.07 3.46
333 334 0.529378 TCCGTCCGTCTAAAGAAGGC 59.471 55.000 7.04 2.64 42.35 4.35
334 335 0.531200 CCGTCCGTCTAAAGAAGGCT 59.469 55.000 7.04 0.00 42.35 4.58
335 336 1.747355 CCGTCCGTCTAAAGAAGGCTA 59.253 52.381 7.04 0.00 42.35 3.93
336 337 2.223525 CCGTCCGTCTAAAGAAGGCTAG 60.224 54.545 7.04 1.88 42.35 3.42
337 338 2.681848 CGTCCGTCTAAAGAAGGCTAGA 59.318 50.000 7.04 0.00 42.35 2.43
338 339 3.315749 CGTCCGTCTAAAGAAGGCTAGAT 59.684 47.826 7.04 0.00 42.35 1.98
339 340 4.514441 CGTCCGTCTAAAGAAGGCTAGATA 59.486 45.833 7.04 0.00 42.35 1.98
340 341 5.008415 CGTCCGTCTAAAGAAGGCTAGATAA 59.992 44.000 7.04 0.00 42.35 1.75
341 342 6.294065 CGTCCGTCTAAAGAAGGCTAGATAAT 60.294 42.308 7.04 0.00 42.35 1.28
342 343 6.864165 GTCCGTCTAAAGAAGGCTAGATAATG 59.136 42.308 7.04 0.00 42.35 1.90
343 344 6.015350 TCCGTCTAAAGAAGGCTAGATAATGG 60.015 42.308 7.04 0.00 42.35 3.16
344 345 5.635700 CGTCTAAAGAAGGCTAGATAATGGC 59.364 44.000 0.00 0.00 33.90 4.40
345 346 6.517529 CGTCTAAAGAAGGCTAGATAATGGCT 60.518 42.308 0.00 0.00 40.91 4.75
347 348 7.172361 GTCTAAAGAAGGCTAGATAATGGCTTG 59.828 40.741 6.52 0.00 46.63 4.01
348 349 5.379706 AAGAAGGCTAGATAATGGCTTGT 57.620 39.130 6.52 0.09 46.63 3.16
349 350 6.500589 AAGAAGGCTAGATAATGGCTTGTA 57.499 37.500 6.52 0.00 46.63 2.41
350 351 6.694445 AGAAGGCTAGATAATGGCTTGTAT 57.306 37.500 6.52 0.00 46.63 2.29
351 352 6.706295 AGAAGGCTAGATAATGGCTTGTATC 58.294 40.000 6.52 0.00 46.63 2.24
352 353 6.270927 AGAAGGCTAGATAATGGCTTGTATCA 59.729 38.462 6.52 0.00 46.63 2.15
353 354 6.633325 AGGCTAGATAATGGCTTGTATCAT 57.367 37.500 0.00 0.00 35.50 2.45
354 355 7.025520 AGGCTAGATAATGGCTTGTATCATT 57.974 36.000 0.00 0.00 35.50 2.57
355 356 7.465116 AGGCTAGATAATGGCTTGTATCATTT 58.535 34.615 0.00 0.00 35.50 2.32
356 357 7.946776 AGGCTAGATAATGGCTTGTATCATTTT 59.053 33.333 0.00 0.00 35.50 1.82
357 358 8.025445 GGCTAGATAATGGCTTGTATCATTTTG 58.975 37.037 0.00 0.00 35.32 2.44
358 359 8.571336 GCTAGATAATGGCTTGTATCATTTTGT 58.429 33.333 0.00 0.00 35.50 2.83
361 362 8.416329 AGATAATGGCTTGTATCATTTTGTTCC 58.584 33.333 0.00 0.00 35.50 3.62
362 363 4.799564 TGGCTTGTATCATTTTGTTCCC 57.200 40.909 0.00 0.00 0.00 3.97
363 364 4.415596 TGGCTTGTATCATTTTGTTCCCT 58.584 39.130 0.00 0.00 0.00 4.20
364 365 5.575157 TGGCTTGTATCATTTTGTTCCCTA 58.425 37.500 0.00 0.00 0.00 3.53
365 366 5.417580 TGGCTTGTATCATTTTGTTCCCTAC 59.582 40.000 0.00 0.00 0.00 3.18
366 367 5.448632 GGCTTGTATCATTTTGTTCCCTACG 60.449 44.000 0.00 0.00 0.00 3.51
367 368 5.353123 GCTTGTATCATTTTGTTCCCTACGA 59.647 40.000 0.00 0.00 0.00 3.43
368 369 6.128117 GCTTGTATCATTTTGTTCCCTACGAA 60.128 38.462 0.00 0.00 0.00 3.85
379 380 4.585955 TTCCCTACGAACATGAGATAGC 57.414 45.455 0.00 0.00 0.00 2.97
380 381 3.833732 TCCCTACGAACATGAGATAGCT 58.166 45.455 0.00 0.00 0.00 3.32
381 382 4.215908 TCCCTACGAACATGAGATAGCTT 58.784 43.478 0.00 0.00 0.00 3.74
382 383 4.649674 TCCCTACGAACATGAGATAGCTTT 59.350 41.667 0.00 0.00 0.00 3.51
383 384 5.831525 TCCCTACGAACATGAGATAGCTTTA 59.168 40.000 0.00 0.00 0.00 1.85
384 385 6.016192 TCCCTACGAACATGAGATAGCTTTAG 60.016 42.308 0.00 0.00 0.00 1.85
385 386 5.631512 CCTACGAACATGAGATAGCTTTAGC 59.368 44.000 0.00 0.00 42.49 3.09
386 387 4.372656 ACGAACATGAGATAGCTTTAGCC 58.627 43.478 0.00 0.00 43.38 3.93
387 388 3.426859 CGAACATGAGATAGCTTTAGCCG 59.573 47.826 0.00 0.00 43.38 5.52
388 389 4.621991 GAACATGAGATAGCTTTAGCCGA 58.378 43.478 0.00 0.00 43.38 5.54
389 390 4.672587 ACATGAGATAGCTTTAGCCGAA 57.327 40.909 0.00 0.00 43.38 4.30
390 391 4.372656 ACATGAGATAGCTTTAGCCGAAC 58.627 43.478 0.00 0.00 43.38 3.95
391 392 4.141937 ACATGAGATAGCTTTAGCCGAACA 60.142 41.667 0.00 0.00 43.38 3.18
392 393 4.672587 TGAGATAGCTTTAGCCGAACAT 57.327 40.909 0.00 0.00 43.38 2.71
393 394 4.371786 TGAGATAGCTTTAGCCGAACATG 58.628 43.478 0.00 0.00 43.38 3.21
394 395 4.099419 TGAGATAGCTTTAGCCGAACATGA 59.901 41.667 0.00 0.00 43.38 3.07
395 396 5.023533 AGATAGCTTTAGCCGAACATGAA 57.976 39.130 0.00 0.00 43.38 2.57
396 397 5.615289 AGATAGCTTTAGCCGAACATGAAT 58.385 37.500 0.00 0.00 43.38 2.57
397 398 6.759272 AGATAGCTTTAGCCGAACATGAATA 58.241 36.000 0.00 0.00 43.38 1.75
398 399 7.390027 AGATAGCTTTAGCCGAACATGAATAT 58.610 34.615 0.00 0.00 43.38 1.28
399 400 7.880195 AGATAGCTTTAGCCGAACATGAATATT 59.120 33.333 0.00 0.00 43.38 1.28
400 401 6.699575 AGCTTTAGCCGAACATGAATATTT 57.300 33.333 0.00 0.00 43.38 1.40
401 402 7.801716 AGCTTTAGCCGAACATGAATATTTA 57.198 32.000 0.00 0.00 43.38 1.40
402 403 8.220755 AGCTTTAGCCGAACATGAATATTTAA 57.779 30.769 0.00 0.00 43.38 1.52
403 404 8.129211 AGCTTTAGCCGAACATGAATATTTAAC 58.871 33.333 0.00 0.00 43.38 2.01
404 405 8.129211 GCTTTAGCCGAACATGAATATTTAACT 58.871 33.333 0.00 0.00 34.31 2.24
409 410 8.952278 AGCCGAACATGAATATTTAACTAAACA 58.048 29.630 0.00 0.00 0.00 2.83
410 411 9.730420 GCCGAACATGAATATTTAACTAAACAT 57.270 29.630 0.00 0.00 0.00 2.71
432 433 9.889128 AACATGAATATTTAGGGAAATGTTTGG 57.111 29.630 0.00 0.00 36.74 3.28
433 434 7.986889 ACATGAATATTTAGGGAAATGTTTGGC 59.013 33.333 0.00 0.00 36.74 4.52
434 435 7.732222 TGAATATTTAGGGAAATGTTTGGCT 57.268 32.000 0.00 0.00 36.74 4.75
435 436 8.144862 TGAATATTTAGGGAAATGTTTGGCTT 57.855 30.769 0.00 0.00 36.74 4.35
436 437 8.601546 TGAATATTTAGGGAAATGTTTGGCTTT 58.398 29.630 0.00 0.00 36.74 3.51
439 440 6.987403 TTTAGGGAAATGTTTGGCTTTAGT 57.013 33.333 0.00 0.00 0.00 2.24
440 441 6.987403 TTAGGGAAATGTTTGGCTTTAGTT 57.013 33.333 0.00 0.00 0.00 2.24
441 442 5.213891 AGGGAAATGTTTGGCTTTAGTTG 57.786 39.130 0.00 0.00 0.00 3.16
442 443 4.898861 AGGGAAATGTTTGGCTTTAGTTGA 59.101 37.500 0.00 0.00 0.00 3.18
443 444 4.988540 GGGAAATGTTTGGCTTTAGTTGAC 59.011 41.667 0.00 0.00 0.00 3.18
444 445 4.679654 GGAAATGTTTGGCTTTAGTTGACG 59.320 41.667 0.00 0.00 0.00 4.35
445 446 3.915437 ATGTTTGGCTTTAGTTGACGG 57.085 42.857 0.00 0.00 0.00 4.79
446 447 2.920524 TGTTTGGCTTTAGTTGACGGA 58.079 42.857 0.00 0.00 0.00 4.69
447 448 3.482436 TGTTTGGCTTTAGTTGACGGAT 58.518 40.909 0.00 0.00 0.00 4.18
448 449 3.500680 TGTTTGGCTTTAGTTGACGGATC 59.499 43.478 0.00 0.00 0.00 3.36
449 450 3.410631 TTGGCTTTAGTTGACGGATCA 57.589 42.857 0.00 0.00 0.00 2.92
450 451 2.695359 TGGCTTTAGTTGACGGATCAC 58.305 47.619 0.00 0.00 33.38 3.06
451 452 2.037902 TGGCTTTAGTTGACGGATCACA 59.962 45.455 0.00 0.00 33.38 3.58
452 453 3.071479 GGCTTTAGTTGACGGATCACAA 58.929 45.455 0.00 0.00 33.38 3.33
453 454 3.125316 GGCTTTAGTTGACGGATCACAAG 59.875 47.826 0.00 0.00 33.38 3.16
454 455 3.424962 GCTTTAGTTGACGGATCACAAGC 60.425 47.826 0.00 0.00 33.38 4.01
455 456 1.990799 TAGTTGACGGATCACAAGCG 58.009 50.000 0.00 0.00 33.38 4.68
456 457 0.033504 AGTTGACGGATCACAAGCGT 59.966 50.000 0.00 0.00 33.38 5.07
457 458 0.163788 GTTGACGGATCACAAGCGTG 59.836 55.000 0.00 0.00 45.08 5.34
471 472 4.514577 CGTGAGATCCGCCGCCTT 62.515 66.667 0.00 0.00 0.00 4.35
472 473 2.586357 GTGAGATCCGCCGCCTTC 60.586 66.667 0.00 0.00 0.00 3.46
473 474 2.759973 TGAGATCCGCCGCCTTCT 60.760 61.111 0.00 0.00 0.00 2.85
474 475 2.028337 GAGATCCGCCGCCTTCTC 59.972 66.667 0.00 0.00 0.00 2.87
475 476 2.443016 AGATCCGCCGCCTTCTCT 60.443 61.111 0.00 0.00 0.00 3.10
476 477 1.152735 AGATCCGCCGCCTTCTCTA 60.153 57.895 0.00 0.00 0.00 2.43
477 478 0.540830 AGATCCGCCGCCTTCTCTAT 60.541 55.000 0.00 0.00 0.00 1.98
478 479 0.389166 GATCCGCCGCCTTCTCTATG 60.389 60.000 0.00 0.00 0.00 2.23
479 480 1.115930 ATCCGCCGCCTTCTCTATGT 61.116 55.000 0.00 0.00 0.00 2.29
480 481 1.300233 CCGCCGCCTTCTCTATGTC 60.300 63.158 0.00 0.00 0.00 3.06
481 482 1.437573 CGCCGCCTTCTCTATGTCA 59.562 57.895 0.00 0.00 0.00 3.58
482 483 0.872021 CGCCGCCTTCTCTATGTCAC 60.872 60.000 0.00 0.00 0.00 3.67
483 484 0.872021 GCCGCCTTCTCTATGTCACG 60.872 60.000 0.00 0.00 0.00 4.35
484 485 0.738975 CCGCCTTCTCTATGTCACGA 59.261 55.000 0.00 0.00 0.00 4.35
485 486 1.268794 CCGCCTTCTCTATGTCACGAG 60.269 57.143 0.00 0.00 0.00 4.18
486 487 1.402259 CGCCTTCTCTATGTCACGAGT 59.598 52.381 0.00 0.00 0.00 4.18
487 488 2.792890 CGCCTTCTCTATGTCACGAGTG 60.793 54.545 0.00 0.00 0.00 3.51
488 489 2.164624 GCCTTCTCTATGTCACGAGTGT 59.835 50.000 2.97 0.00 0.00 3.55
489 490 3.732471 GCCTTCTCTATGTCACGAGTGTC 60.732 52.174 2.97 0.00 0.00 3.67
490 491 3.692101 CCTTCTCTATGTCACGAGTGTCT 59.308 47.826 2.97 0.00 0.00 3.41
491 492 4.156922 CCTTCTCTATGTCACGAGTGTCTT 59.843 45.833 2.97 0.00 0.00 3.01
492 493 5.336055 CCTTCTCTATGTCACGAGTGTCTTT 60.336 44.000 2.97 0.00 0.00 2.52
493 494 5.707242 TCTCTATGTCACGAGTGTCTTTT 57.293 39.130 2.97 0.00 0.00 2.27
494 495 5.461526 TCTCTATGTCACGAGTGTCTTTTG 58.538 41.667 2.97 0.00 0.00 2.44
495 496 4.556233 TCTATGTCACGAGTGTCTTTTGG 58.444 43.478 2.97 0.00 0.00 3.28
496 497 1.948104 TGTCACGAGTGTCTTTTGGG 58.052 50.000 2.97 0.00 0.00 4.12
497 498 1.208535 TGTCACGAGTGTCTTTTGGGT 59.791 47.619 2.97 0.00 0.00 4.51
498 499 1.597663 GTCACGAGTGTCTTTTGGGTG 59.402 52.381 2.97 0.00 0.00 4.61
499 500 1.208535 TCACGAGTGTCTTTTGGGTGT 59.791 47.619 2.97 0.00 0.00 4.16
500 501 1.597663 CACGAGTGTCTTTTGGGTGTC 59.402 52.381 0.00 0.00 0.00 3.67
501 502 1.485066 ACGAGTGTCTTTTGGGTGTCT 59.515 47.619 0.00 0.00 0.00 3.41
502 503 2.093128 ACGAGTGTCTTTTGGGTGTCTT 60.093 45.455 0.00 0.00 0.00 3.01
503 504 2.544267 CGAGTGTCTTTTGGGTGTCTTC 59.456 50.000 0.00 0.00 0.00 2.87
504 505 3.741388 CGAGTGTCTTTTGGGTGTCTTCT 60.741 47.826 0.00 0.00 0.00 2.85
505 506 3.809905 AGTGTCTTTTGGGTGTCTTCTC 58.190 45.455 0.00 0.00 0.00 2.87
506 507 3.456277 AGTGTCTTTTGGGTGTCTTCTCT 59.544 43.478 0.00 0.00 0.00 3.10
507 508 3.810386 GTGTCTTTTGGGTGTCTTCTCTC 59.190 47.826 0.00 0.00 0.00 3.20
508 509 3.711704 TGTCTTTTGGGTGTCTTCTCTCT 59.288 43.478 0.00 0.00 0.00 3.10
509 510 4.202264 TGTCTTTTGGGTGTCTTCTCTCTC 60.202 45.833 0.00 0.00 0.00 3.20
510 511 4.039852 GTCTTTTGGGTGTCTTCTCTCTCT 59.960 45.833 0.00 0.00 0.00 3.10
511 512 4.656112 TCTTTTGGGTGTCTTCTCTCTCTT 59.344 41.667 0.00 0.00 0.00 2.85
512 513 5.131142 TCTTTTGGGTGTCTTCTCTCTCTTT 59.869 40.000 0.00 0.00 0.00 2.52
513 514 5.373812 TTTGGGTGTCTTCTCTCTCTTTT 57.626 39.130 0.00 0.00 0.00 2.27
514 515 5.373812 TTGGGTGTCTTCTCTCTCTTTTT 57.626 39.130 0.00 0.00 0.00 1.94
538 539 3.014369 GCAACATTATGCGCGTTGT 57.986 47.368 20.95 12.79 41.60 3.32
539 540 2.166741 GCAACATTATGCGCGTTGTA 57.833 45.000 20.95 4.50 41.60 2.41
540 541 2.510874 GCAACATTATGCGCGTTGTAA 58.489 42.857 20.95 10.66 41.60 2.41
541 542 2.911723 GCAACATTATGCGCGTTGTAAA 59.088 40.909 20.95 6.06 41.60 2.01
542 543 3.362237 GCAACATTATGCGCGTTGTAAAA 59.638 39.130 20.95 5.72 41.60 1.52
543 544 4.031201 GCAACATTATGCGCGTTGTAAAAT 59.969 37.500 20.95 7.65 41.60 1.82
544 545 5.443955 GCAACATTATGCGCGTTGTAAAATT 60.444 36.000 20.95 7.19 41.60 1.82
545 546 5.678910 ACATTATGCGCGTTGTAAAATTG 57.321 34.783 7.78 0.00 0.00 2.32
546 547 5.157781 ACATTATGCGCGTTGTAAAATTGT 58.842 33.333 7.78 0.00 0.00 2.71
547 548 5.285134 ACATTATGCGCGTTGTAAAATTGTC 59.715 36.000 7.78 0.00 0.00 3.18
548 549 3.552604 ATGCGCGTTGTAAAATTGTCT 57.447 38.095 8.43 0.00 0.00 3.41
549 550 3.341857 TGCGCGTTGTAAAATTGTCTT 57.658 38.095 8.43 0.00 0.00 3.01
550 551 3.696898 TGCGCGTTGTAAAATTGTCTTT 58.303 36.364 8.43 0.00 0.00 2.52
551 552 4.106197 TGCGCGTTGTAAAATTGTCTTTT 58.894 34.783 8.43 0.00 0.00 2.27
552 553 4.027295 TGCGCGTTGTAAAATTGTCTTTTG 60.027 37.500 8.43 0.00 0.00 2.44
553 554 4.433079 CGCGTTGTAAAATTGTCTTTTGC 58.567 39.130 0.00 0.00 0.00 3.68
554 555 4.027295 CGCGTTGTAAAATTGTCTTTTGCA 60.027 37.500 0.00 0.00 33.39 4.08
555 556 5.499334 CGCGTTGTAAAATTGTCTTTTGCAA 60.499 36.000 0.00 0.00 40.09 4.08
560 561 7.658179 TGTAAAATTGTCTTTTGCAACAACA 57.342 28.000 0.00 0.65 38.14 3.33
561 562 7.513968 TGTAAAATTGTCTTTTGCAACAACAC 58.486 30.769 0.00 0.00 38.14 3.32
562 563 6.799926 AAAATTGTCTTTTGCAACAACACT 57.200 29.167 0.00 0.00 38.14 3.55
563 564 6.407475 AAATTGTCTTTTGCAACAACACTC 57.593 33.333 0.00 0.00 38.14 3.51
564 565 4.511617 TTGTCTTTTGCAACAACACTCA 57.488 36.364 0.00 0.00 30.73 3.41
565 566 4.717233 TGTCTTTTGCAACAACACTCAT 57.283 36.364 0.00 0.00 0.00 2.90
566 567 4.422840 TGTCTTTTGCAACAACACTCATG 58.577 39.130 0.00 0.00 0.00 3.07
567 568 4.082300 TGTCTTTTGCAACAACACTCATGT 60.082 37.500 0.00 0.00 42.46 3.21
607 608 8.902540 AAATGCCTATATTTTCTACGACATCA 57.097 30.769 0.00 0.00 0.00 3.07
608 609 9.507329 AAATGCCTATATTTTCTACGACATCAT 57.493 29.630 0.00 0.00 0.00 2.45
609 610 9.507329 AATGCCTATATTTTCTACGACATCATT 57.493 29.630 0.00 0.00 0.00 2.57
610 611 8.902540 TGCCTATATTTTCTACGACATCATTT 57.097 30.769 0.00 0.00 0.00 2.32
611 612 8.773645 TGCCTATATTTTCTACGACATCATTTG 58.226 33.333 0.00 0.00 0.00 2.32
612 613 8.774586 GCCTATATTTTCTACGACATCATTTGT 58.225 33.333 0.00 0.00 42.79 2.83
626 627 8.555166 GACATCATTTGTGTCGTAAAAAGAAA 57.445 30.769 0.00 0.00 39.18 2.52
627 628 9.180678 GACATCATTTGTGTCGTAAAAAGAAAT 57.819 29.630 0.00 0.00 39.18 2.17
628 629 9.180678 ACATCATTTGTGTCGTAAAAAGAAATC 57.819 29.630 0.00 0.00 37.11 2.17
629 630 8.638565 CATCATTTGTGTCGTAAAAAGAAATCC 58.361 33.333 0.00 0.00 0.00 3.01
630 631 6.853872 TCATTTGTGTCGTAAAAAGAAATCCG 59.146 34.615 0.00 0.00 0.00 4.18
631 632 5.738118 TTGTGTCGTAAAAAGAAATCCGT 57.262 34.783 0.00 0.00 0.00 4.69
632 633 6.841443 TTGTGTCGTAAAAAGAAATCCGTA 57.159 33.333 0.00 0.00 0.00 4.02
633 634 6.214205 TGTGTCGTAAAAAGAAATCCGTAC 57.786 37.500 0.00 0.00 0.00 3.67
634 635 5.752472 TGTGTCGTAAAAAGAAATCCGTACA 59.248 36.000 0.00 0.00 0.00 2.90
635 636 6.424509 TGTGTCGTAAAAAGAAATCCGTACAT 59.575 34.615 0.00 0.00 0.00 2.29
636 637 6.735063 GTGTCGTAAAAAGAAATCCGTACATG 59.265 38.462 0.00 0.00 0.00 3.21
637 638 6.645827 TGTCGTAAAAAGAAATCCGTACATGA 59.354 34.615 0.00 0.00 0.00 3.07
638 639 6.952083 GTCGTAAAAAGAAATCCGTACATGAC 59.048 38.462 0.00 0.00 0.00 3.06
639 640 6.645827 TCGTAAAAAGAAATCCGTACATGACA 59.354 34.615 0.00 0.00 0.00 3.58
640 641 7.171167 TCGTAAAAAGAAATCCGTACATGACAA 59.829 33.333 0.00 0.00 0.00 3.18
641 642 7.267600 CGTAAAAAGAAATCCGTACATGACAAC 59.732 37.037 0.00 0.00 0.00 3.32
642 643 6.627395 AAAAGAAATCCGTACATGACAACA 57.373 33.333 0.00 0.00 0.00 3.33
643 644 5.607119 AAGAAATCCGTACATGACAACAC 57.393 39.130 0.00 0.00 0.00 3.32
644 645 4.000988 AGAAATCCGTACATGACAACACC 58.999 43.478 0.00 0.00 0.00 4.16
645 646 2.396590 ATCCGTACATGACAACACCC 57.603 50.000 0.00 0.00 0.00 4.61
646 647 1.049402 TCCGTACATGACAACACCCA 58.951 50.000 0.00 0.00 0.00 4.51
647 648 1.626321 TCCGTACATGACAACACCCAT 59.374 47.619 0.00 0.00 0.00 4.00
648 649 1.737236 CCGTACATGACAACACCCATG 59.263 52.381 0.00 0.00 44.12 3.66
657 658 4.605064 ACACCCATGTTGCAAGCT 57.395 50.000 0.00 0.00 34.46 3.74
658 659 2.043625 ACACCCATGTTGCAAGCTG 58.956 52.632 0.00 0.00 34.46 4.24
659 660 1.373748 CACCCATGTTGCAAGCTGC 60.374 57.895 0.00 0.00 45.29 5.25
668 669 4.590487 GCAAGCTGCATGCACATT 57.410 50.000 23.26 11.58 44.26 2.71
669 670 3.725485 GCAAGCTGCATGCACATTA 57.275 47.368 23.26 0.00 44.26 1.90
670 671 1.999048 GCAAGCTGCATGCACATTAA 58.001 45.000 23.26 0.00 44.26 1.40
671 672 2.339418 GCAAGCTGCATGCACATTAAA 58.661 42.857 23.26 0.00 44.26 1.52
672 673 2.933906 GCAAGCTGCATGCACATTAAAT 59.066 40.909 23.26 0.00 44.26 1.40
673 674 3.000925 GCAAGCTGCATGCACATTAAATC 59.999 43.478 23.26 0.00 44.26 2.17
674 675 4.430007 CAAGCTGCATGCACATTAAATCT 58.570 39.130 18.46 1.08 45.94 2.40
675 676 5.584442 CAAGCTGCATGCACATTAAATCTA 58.416 37.500 18.46 0.00 45.94 1.98
676 677 6.213677 CAAGCTGCATGCACATTAAATCTAT 58.786 36.000 18.46 0.00 45.94 1.98
677 678 6.010294 AGCTGCATGCACATTAAATCTATC 57.990 37.500 18.46 0.00 45.94 2.08
678 679 5.533528 AGCTGCATGCACATTAAATCTATCA 59.466 36.000 18.46 0.00 45.94 2.15
679 680 6.208797 AGCTGCATGCACATTAAATCTATCAT 59.791 34.615 18.46 0.00 45.94 2.45
680 681 6.866770 GCTGCATGCACATTAAATCTATCATT 59.133 34.615 18.46 0.00 42.31 2.57
681 682 7.384115 GCTGCATGCACATTAAATCTATCATTT 59.616 33.333 18.46 0.00 42.31 2.32
682 683 9.256477 CTGCATGCACATTAAATCTATCATTTT 57.744 29.630 18.46 0.00 0.00 1.82
683 684 9.602568 TGCATGCACATTAAATCTATCATTTTT 57.397 25.926 18.46 0.00 0.00 1.94
703 704 6.395426 TTTTTAATCAGCCATCCTAGCATG 57.605 37.500 0.00 0.00 0.00 4.06
704 705 2.581216 AATCAGCCATCCTAGCATGG 57.419 50.000 8.48 8.48 45.70 3.66
705 706 1.738474 ATCAGCCATCCTAGCATGGA 58.262 50.000 17.44 0.00 45.79 3.41
706 707 1.054231 TCAGCCATCCTAGCATGGAG 58.946 55.000 17.44 7.97 45.79 3.86
707 708 0.605860 CAGCCATCCTAGCATGGAGC 60.606 60.000 17.44 1.71 45.79 4.70
708 709 1.058428 AGCCATCCTAGCATGGAGCA 61.058 55.000 17.44 0.00 45.79 4.26
709 710 0.037877 GCCATCCTAGCATGGAGCAT 59.962 55.000 17.44 0.00 45.79 3.79
710 711 1.822506 CCATCCTAGCATGGAGCATG 58.177 55.000 6.89 0.00 45.79 4.06
724 725 3.028130 CATGCCCTGCTGCGTATG 58.972 61.111 0.00 0.00 0.00 2.39
725 726 1.524393 CATGCCCTGCTGCGTATGA 60.524 57.895 0.95 0.00 0.00 2.15
726 727 1.524621 ATGCCCTGCTGCGTATGAC 60.525 57.895 0.00 0.00 0.00 3.06
771 775 0.889186 TGGGAGAAACTTGAAGGCGC 60.889 55.000 0.00 0.00 0.00 6.53
772 776 1.587043 GGGAGAAACTTGAAGGCGCC 61.587 60.000 21.89 21.89 0.00 6.53
818 822 2.047830 ACTTTCCTTTGGAGACGACCT 58.952 47.619 0.00 0.00 31.21 3.85
819 823 2.438392 ACTTTCCTTTGGAGACGACCTT 59.562 45.455 0.00 0.00 31.21 3.50
820 824 2.543777 TTCCTTTGGAGACGACCTTG 57.456 50.000 0.00 0.00 31.21 3.61
821 825 0.034896 TCCTTTGGAGACGACCTTGC 59.965 55.000 0.00 0.00 0.00 4.01
822 826 0.250295 CCTTTGGAGACGACCTTGCA 60.250 55.000 0.00 0.00 0.00 4.08
823 827 1.593196 CTTTGGAGACGACCTTGCAA 58.407 50.000 0.00 0.00 0.00 4.08
836 840 0.027979 CTTGCAATGTATGGCGTCGG 59.972 55.000 0.00 0.00 0.00 4.79
849 853 1.446272 CGTCGGCTTCCAAGTCTCC 60.446 63.158 0.00 0.00 0.00 3.71
891 896 3.118038 AGAAAAGAGCACACTGTGGGTAA 60.118 43.478 12.28 0.00 33.64 2.85
892 897 2.256117 AAGAGCACACTGTGGGTAAC 57.744 50.000 12.28 3.78 33.64 2.50
893 898 1.424638 AGAGCACACTGTGGGTAACT 58.575 50.000 12.28 6.00 33.64 2.24
894 899 1.070758 AGAGCACACTGTGGGTAACTG 59.929 52.381 12.28 0.69 33.64 3.16
895 900 0.108585 AGCACACTGTGGGTAACTGG 59.891 55.000 12.28 0.00 33.64 4.00
896 901 0.889186 GCACACTGTGGGTAACTGGG 60.889 60.000 12.28 0.00 37.18 4.45
897 902 0.472471 CACACTGTGGGTAACTGGGT 59.528 55.000 13.09 0.00 44.51 4.51
898 903 1.695242 CACACTGTGGGTAACTGGGTA 59.305 52.381 13.09 0.00 42.01 3.69
906 911 3.056035 GTGGGTAACTGGGTACTCTGAAG 60.056 52.174 6.63 0.00 0.00 3.02
973 978 2.341101 GGCGTCTTCCTCTCGACCA 61.341 63.158 0.00 0.00 0.00 4.02
974 979 1.153997 GCGTCTTCCTCTCGACCAC 60.154 63.158 0.00 0.00 0.00 4.16
975 980 1.507174 CGTCTTCCTCTCGACCACC 59.493 63.158 0.00 0.00 0.00 4.61
1113 1118 3.918220 CTCCGCAAGCGCATCGTC 61.918 66.667 11.47 0.00 38.40 4.20
1152 1157 3.124686 CTCTGGCTCGCCTACCTC 58.875 66.667 9.65 0.00 36.94 3.85
1266 1271 2.506957 CCTTTTGTGGGCGCCCTTT 61.507 57.895 43.34 0.00 36.94 3.11
1395 1400 5.823697 CGCTGTACGTCTACTGGAAGTCG 62.824 56.522 0.00 0.00 42.01 4.18
1465 1470 1.523938 GGCGTCCTCAAGTATGCCC 60.524 63.158 0.00 0.00 36.51 5.36
1941 1946 1.219393 CCTCGTCTTCTCCAAGGCC 59.781 63.158 0.00 0.00 29.43 5.19
2084 2089 1.290009 GGAAGTTGCGCAAATGCCT 59.710 52.632 34.80 20.92 37.91 4.75
2554 2559 1.082766 TCCTCAGATCTTGCCCCCA 59.917 57.895 0.00 0.00 0.00 4.96
2605 2610 0.035439 CATAAACAGCGGGTCCAGGT 60.035 55.000 0.00 0.00 0.00 4.00
3134 3139 1.002142 AGTTCGTTTTGCGCCTTAACC 60.002 47.619 4.18 0.00 41.07 2.85
3196 3201 8.450964 GCTATTTGTTCACACTTTTCTGCTATA 58.549 33.333 0.00 0.00 0.00 1.31
3201 3206 6.818644 TGTTCACACTTTTCTGCTATATCCTC 59.181 38.462 0.00 0.00 0.00 3.71
3240 3245 7.328737 TCCCTAGTTTAGAGCTCACATTTAAC 58.671 38.462 17.77 9.92 0.00 2.01
3270 3275 9.971744 GATTTTCAATTAAAATTGGGTCATTCG 57.028 29.630 13.89 0.00 45.70 3.34
3273 3278 9.717942 TTTCAATTAAAATTGGGTCATTCGATT 57.282 25.926 13.89 0.00 44.51 3.34
3276 3281 9.757859 CAATTAAAATTGGGTCATTCGATTTTG 57.242 29.630 7.42 0.00 41.54 2.44
3277 3282 9.717942 AATTAAAATTGGGTCATTCGATTTTGA 57.282 25.926 10.55 5.01 38.17 2.69
3278 3283 8.527567 TTAAAATTGGGTCATTCGATTTTGAC 57.472 30.769 12.69 12.69 38.17 3.18
3320 3325 9.037737 TCAAAGCTTTCTCATTCAATTCTTTTG 57.962 29.630 9.23 0.00 0.00 2.44
3324 3329 8.084684 AGCTTTCTCATTCAATTCTTTTGTACC 58.915 33.333 0.00 0.00 0.00 3.34
3326 3331 9.918630 CTTTCTCATTCAATTCTTTTGTACCAT 57.081 29.630 0.00 0.00 0.00 3.55
3333 3338 5.774690 TCAATTCTTTTGTACCATGCTTCCT 59.225 36.000 0.00 0.00 0.00 3.36
3334 3339 6.945435 TCAATTCTTTTGTACCATGCTTCCTA 59.055 34.615 0.00 0.00 0.00 2.94
3335 3340 7.450014 TCAATTCTTTTGTACCATGCTTCCTAA 59.550 33.333 0.00 0.00 0.00 2.69
3375 3390 6.619801 ATTTACTCTCGTAATCCAATTGGC 57.380 37.500 20.33 4.65 35.65 4.52
3417 3432 2.033407 CAGCGACAAACTGAACAGTGAG 60.033 50.000 8.25 6.76 41.58 3.51
3420 3435 3.448686 CGACAAACTGAACAGTGAGAGT 58.551 45.455 8.25 5.19 41.58 3.24
3429 3444 3.570125 TGAACAGTGAGAGTGATTCGTCT 59.430 43.478 0.00 0.00 0.00 4.18
3460 3475 5.133221 TCTACCGACCAAATACTACTACCC 58.867 45.833 0.00 0.00 0.00 3.69
3461 3476 3.986435 ACCGACCAAATACTACTACCCT 58.014 45.455 0.00 0.00 0.00 4.34
3560 3575 9.327628 TGAATGCCACCAAAAATTATATCATTG 57.672 29.630 0.00 0.00 0.00 2.82
3561 3576 8.680039 AATGCCACCAAAAATTATATCATTGG 57.320 30.769 0.00 0.00 44.75 3.16
3659 3674 8.102047 AGATCAAAATTTGGCATGGAATACAAA 58.898 29.630 5.83 0.00 36.98 2.83
3662 3677 7.603404 TCAAAATTTGGCATGGAATACAAAGAG 59.397 33.333 5.83 0.00 36.33 2.85
3680 3695 5.340439 AAGAGGACTAATAAACCAGGACG 57.660 43.478 0.00 0.00 0.00 4.79
3765 3800 4.097892 CCAAAGTATACCTGCCAAATGGAC 59.902 45.833 2.98 0.00 37.39 4.02
3895 3930 6.585702 CGAGAGACTGCAATATCAAATAGGAG 59.414 42.308 0.00 0.00 0.00 3.69
3959 3994 2.167693 TCGGTGTGTCCTCAATGGTATC 59.832 50.000 0.00 0.00 37.07 2.24
4000 4035 6.488006 GTCATCATTAGCACAAGGTATGGAAT 59.512 38.462 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.439543 AATATCTGGCTGGGTCTCCC 58.560 55.000 0.00 0.00 45.71 4.30
9 10 2.173569 ACAAATATCTGGCTGGGTCTCC 59.826 50.000 0.00 0.00 0.00 3.71
10 11 3.567478 ACAAATATCTGGCTGGGTCTC 57.433 47.619 0.00 0.00 0.00 3.36
11 12 4.018050 AGAAACAAATATCTGGCTGGGTCT 60.018 41.667 0.00 0.00 0.00 3.85
12 13 4.273318 AGAAACAAATATCTGGCTGGGTC 58.727 43.478 0.00 0.00 0.00 4.46
13 14 4.018050 AGAGAAACAAATATCTGGCTGGGT 60.018 41.667 0.00 0.00 0.00 4.51
14 15 4.530875 AGAGAAACAAATATCTGGCTGGG 58.469 43.478 0.00 0.00 0.00 4.45
15 16 6.151648 TGAAAGAGAAACAAATATCTGGCTGG 59.848 38.462 0.00 0.00 0.00 4.85
16 17 7.094463 ACTGAAAGAGAAACAAATATCTGGCTG 60.094 37.037 0.00 0.00 37.43 4.85
17 18 6.944862 ACTGAAAGAGAAACAAATATCTGGCT 59.055 34.615 0.00 0.00 37.43 4.75
18 19 7.150783 ACTGAAAGAGAAACAAATATCTGGC 57.849 36.000 0.00 0.00 37.43 4.85
25 26 9.914131 GGCTATTTTACTGAAAGAGAAACAAAT 57.086 29.630 0.00 0.00 38.54 2.32
26 27 8.908903 TGGCTATTTTACTGAAAGAGAAACAAA 58.091 29.630 0.00 0.00 38.54 2.83
27 28 8.349983 GTGGCTATTTTACTGAAAGAGAAACAA 58.650 33.333 0.00 0.00 38.54 2.83
28 29 7.040686 GGTGGCTATTTTACTGAAAGAGAAACA 60.041 37.037 0.00 0.00 38.54 2.83
29 30 7.306213 GGTGGCTATTTTACTGAAAGAGAAAC 58.694 38.462 0.00 0.00 38.54 2.78
30 31 6.148811 CGGTGGCTATTTTACTGAAAGAGAAA 59.851 38.462 0.00 0.00 38.54 2.52
31 32 5.642063 CGGTGGCTATTTTACTGAAAGAGAA 59.358 40.000 0.00 0.00 38.54 2.87
32 33 5.175859 CGGTGGCTATTTTACTGAAAGAGA 58.824 41.667 0.00 0.00 38.54 3.10
33 34 4.935808 ACGGTGGCTATTTTACTGAAAGAG 59.064 41.667 0.00 0.00 39.12 2.85
34 35 4.693566 CACGGTGGCTATTTTACTGAAAGA 59.306 41.667 0.00 0.00 37.43 2.52
35 36 4.693566 TCACGGTGGCTATTTTACTGAAAG 59.306 41.667 8.50 0.00 42.29 2.62
36 37 4.643463 TCACGGTGGCTATTTTACTGAAA 58.357 39.130 8.50 0.00 0.00 2.69
37 38 4.250464 CTCACGGTGGCTATTTTACTGAA 58.750 43.478 8.50 0.00 0.00 3.02
38 39 3.259876 ACTCACGGTGGCTATTTTACTGA 59.740 43.478 8.50 0.00 0.00 3.41
39 40 3.370978 CACTCACGGTGGCTATTTTACTG 59.629 47.826 8.50 0.00 41.90 2.74
40 41 3.596214 CACTCACGGTGGCTATTTTACT 58.404 45.455 8.50 0.00 41.90 2.24
51 52 0.655733 GTCAACAACCACTCACGGTG 59.344 55.000 0.56 0.56 44.96 4.94
52 53 0.539986 AGTCAACAACCACTCACGGT 59.460 50.000 0.00 0.00 42.71 4.83
53 54 1.330521 CAAGTCAACAACCACTCACGG 59.669 52.381 0.00 0.00 0.00 4.94
54 55 2.006888 ACAAGTCAACAACCACTCACG 58.993 47.619 0.00 0.00 0.00 4.35
55 56 3.190535 ACAACAAGTCAACAACCACTCAC 59.809 43.478 0.00 0.00 0.00 3.51
56 57 3.190327 CACAACAAGTCAACAACCACTCA 59.810 43.478 0.00 0.00 0.00 3.41
57 58 3.438781 TCACAACAAGTCAACAACCACTC 59.561 43.478 0.00 0.00 0.00 3.51
58 59 3.190535 GTCACAACAAGTCAACAACCACT 59.809 43.478 0.00 0.00 0.00 4.00
59 60 3.498082 GTCACAACAAGTCAACAACCAC 58.502 45.455 0.00 0.00 0.00 4.16
60 61 2.490115 GGTCACAACAAGTCAACAACCA 59.510 45.455 0.00 0.00 0.00 3.67
61 62 2.477189 CGGTCACAACAAGTCAACAACC 60.477 50.000 0.00 0.00 0.00 3.77
62 63 2.417239 TCGGTCACAACAAGTCAACAAC 59.583 45.455 0.00 0.00 0.00 3.32
63 64 2.701107 TCGGTCACAACAAGTCAACAA 58.299 42.857 0.00 0.00 0.00 2.83
64 65 2.388310 TCGGTCACAACAAGTCAACA 57.612 45.000 0.00 0.00 0.00 3.33
65 66 3.311322 TCATTCGGTCACAACAAGTCAAC 59.689 43.478 0.00 0.00 0.00 3.18
66 67 3.536570 TCATTCGGTCACAACAAGTCAA 58.463 40.909 0.00 0.00 0.00 3.18
67 68 3.130633 CTCATTCGGTCACAACAAGTCA 58.869 45.455 0.00 0.00 0.00 3.41
68 69 3.390135 TCTCATTCGGTCACAACAAGTC 58.610 45.455 0.00 0.00 0.00 3.01
69 70 3.181465 ACTCTCATTCGGTCACAACAAGT 60.181 43.478 0.00 0.00 0.00 3.16
70 71 3.185188 CACTCTCATTCGGTCACAACAAG 59.815 47.826 0.00 0.00 0.00 3.16
71 72 3.130633 CACTCTCATTCGGTCACAACAA 58.869 45.455 0.00 0.00 0.00 2.83
72 73 2.364002 TCACTCTCATTCGGTCACAACA 59.636 45.455 0.00 0.00 0.00 3.33
73 74 3.026630 TCACTCTCATTCGGTCACAAC 57.973 47.619 0.00 0.00 0.00 3.32
74 75 3.744238 TTCACTCTCATTCGGTCACAA 57.256 42.857 0.00 0.00 0.00 3.33
75 76 3.744238 TTTCACTCTCATTCGGTCACA 57.256 42.857 0.00 0.00 0.00 3.58
76 77 4.083802 CCTTTTTCACTCTCATTCGGTCAC 60.084 45.833 0.00 0.00 0.00 3.67
77 78 4.065088 CCTTTTTCACTCTCATTCGGTCA 58.935 43.478 0.00 0.00 0.00 4.02
78 79 3.120165 GCCTTTTTCACTCTCATTCGGTC 60.120 47.826 0.00 0.00 0.00 4.79
79 80 2.814336 GCCTTTTTCACTCTCATTCGGT 59.186 45.455 0.00 0.00 0.00 4.69
80 81 2.813754 TGCCTTTTTCACTCTCATTCGG 59.186 45.455 0.00 0.00 0.00 4.30
81 82 4.437930 GGATGCCTTTTTCACTCTCATTCG 60.438 45.833 0.00 0.00 0.00 3.34
82 83 4.704057 AGGATGCCTTTTTCACTCTCATTC 59.296 41.667 0.00 0.00 0.00 2.67
83 84 4.670765 AGGATGCCTTTTTCACTCTCATT 58.329 39.130 0.00 0.00 0.00 2.57
84 85 4.313020 AGGATGCCTTTTTCACTCTCAT 57.687 40.909 0.00 0.00 0.00 2.90
85 86 3.795688 AGGATGCCTTTTTCACTCTCA 57.204 42.857 0.00 0.00 0.00 3.27
86 87 5.091261 TCTAGGATGCCTTTTTCACTCTC 57.909 43.478 0.00 0.00 34.61 3.20
87 88 5.707066 ATCTAGGATGCCTTTTTCACTCT 57.293 39.130 0.00 0.00 34.61 3.24
88 89 6.765915 AAATCTAGGATGCCTTTTTCACTC 57.234 37.500 0.00 0.00 34.61 3.51
89 90 6.071165 CCAAAATCTAGGATGCCTTTTTCACT 60.071 38.462 0.00 0.00 34.61 3.41
90 91 6.101997 CCAAAATCTAGGATGCCTTTTTCAC 58.898 40.000 0.00 0.00 34.61 3.18
91 92 5.187576 CCCAAAATCTAGGATGCCTTTTTCA 59.812 40.000 0.00 0.00 34.61 2.69
92 93 5.422012 TCCCAAAATCTAGGATGCCTTTTTC 59.578 40.000 0.00 0.00 34.61 2.29
93 94 5.341169 TCCCAAAATCTAGGATGCCTTTTT 58.659 37.500 0.00 0.00 34.61 1.94
94 95 4.946646 TCCCAAAATCTAGGATGCCTTTT 58.053 39.130 0.00 0.00 34.61 2.27
95 96 4.608170 TCCCAAAATCTAGGATGCCTTT 57.392 40.909 0.00 0.00 34.61 3.11
96 97 4.821532 ATCCCAAAATCTAGGATGCCTT 57.178 40.909 0.00 0.00 38.98 4.35
97 98 4.477249 CAATCCCAAAATCTAGGATGCCT 58.523 43.478 0.00 0.00 39.53 4.75
98 99 3.006217 GCAATCCCAAAATCTAGGATGCC 59.994 47.826 0.00 0.00 39.53 4.40
99 100 3.638160 TGCAATCCCAAAATCTAGGATGC 59.362 43.478 0.00 0.00 39.53 3.91
100 101 4.261322 CGTGCAATCCCAAAATCTAGGATG 60.261 45.833 0.00 0.00 39.53 3.51
101 102 3.885297 CGTGCAATCCCAAAATCTAGGAT 59.115 43.478 0.00 0.00 42.30 3.24
102 103 3.278574 CGTGCAATCCCAAAATCTAGGA 58.721 45.455 0.00 0.00 0.00 2.94
103 104 2.223572 GCGTGCAATCCCAAAATCTAGG 60.224 50.000 0.00 0.00 0.00 3.02
104 105 2.423185 TGCGTGCAATCCCAAAATCTAG 59.577 45.455 0.00 0.00 0.00 2.43
105 106 2.441410 TGCGTGCAATCCCAAAATCTA 58.559 42.857 0.00 0.00 0.00 1.98
106 107 1.255882 TGCGTGCAATCCCAAAATCT 58.744 45.000 0.00 0.00 0.00 2.40
107 108 2.077413 TTGCGTGCAATCCCAAAATC 57.923 45.000 2.58 0.00 0.00 2.17
108 109 2.540265 TTTGCGTGCAATCCCAAAAT 57.460 40.000 8.26 0.00 35.70 1.82
109 110 2.208431 CTTTTGCGTGCAATCCCAAAA 58.792 42.857 8.26 11.84 36.23 2.44
110 111 1.137872 ACTTTTGCGTGCAATCCCAAA 59.862 42.857 8.26 0.00 35.70 3.28
111 112 0.749649 ACTTTTGCGTGCAATCCCAA 59.250 45.000 8.26 0.00 35.70 4.12
112 113 0.749649 AACTTTTGCGTGCAATCCCA 59.250 45.000 8.26 0.00 35.70 4.37
113 114 2.030274 ACTAACTTTTGCGTGCAATCCC 60.030 45.455 8.26 0.00 35.70 3.85
114 115 3.282831 ACTAACTTTTGCGTGCAATCC 57.717 42.857 8.26 0.00 35.70 3.01
115 116 4.778904 TGTACTAACTTTTGCGTGCAATC 58.221 39.130 8.26 0.00 35.70 2.67
116 117 4.822036 TGTACTAACTTTTGCGTGCAAT 57.178 36.364 8.26 0.00 35.70 3.56
117 118 4.319911 GGATGTACTAACTTTTGCGTGCAA 60.320 41.667 2.58 2.58 0.00 4.08
118 119 3.187637 GGATGTACTAACTTTTGCGTGCA 59.812 43.478 0.00 0.00 0.00 4.57
119 120 3.187637 TGGATGTACTAACTTTTGCGTGC 59.812 43.478 0.00 0.00 0.00 5.34
120 121 5.144359 GTTGGATGTACTAACTTTTGCGTG 58.856 41.667 0.00 0.00 37.08 5.34
121 122 4.817464 TGTTGGATGTACTAACTTTTGCGT 59.183 37.500 0.00 0.00 40.01 5.24
122 123 5.351233 TGTTGGATGTACTAACTTTTGCG 57.649 39.130 0.00 0.00 40.01 4.85
123 124 8.587952 AAAATGTTGGATGTACTAACTTTTGC 57.412 30.769 0.00 0.00 42.05 3.68
131 132 9.667107 CTCCTTTCTAAAATGTTGGATGTACTA 57.333 33.333 0.00 0.00 0.00 1.82
132 133 7.611855 CCTCCTTTCTAAAATGTTGGATGTACT 59.388 37.037 0.00 0.00 0.00 2.73
133 134 7.148069 CCCTCCTTTCTAAAATGTTGGATGTAC 60.148 40.741 0.00 0.00 0.00 2.90
134 135 6.889722 CCCTCCTTTCTAAAATGTTGGATGTA 59.110 38.462 0.00 0.00 0.00 2.29
135 136 5.716703 CCCTCCTTTCTAAAATGTTGGATGT 59.283 40.000 0.00 0.00 0.00 3.06
136 137 5.951747 TCCCTCCTTTCTAAAATGTTGGATG 59.048 40.000 0.00 0.00 0.00 3.51
137 138 6.152638 TCCCTCCTTTCTAAAATGTTGGAT 57.847 37.500 0.00 0.00 0.00 3.41
138 139 5.074515 ACTCCCTCCTTTCTAAAATGTTGGA 59.925 40.000 0.00 0.00 0.00 3.53
139 140 5.325239 ACTCCCTCCTTTCTAAAATGTTGG 58.675 41.667 0.00 0.00 0.00 3.77
140 141 7.168905 ACTACTCCCTCCTTTCTAAAATGTTG 58.831 38.462 0.00 0.00 0.00 3.33
141 142 7.331089 ACTACTCCCTCCTTTCTAAAATGTT 57.669 36.000 0.00 0.00 0.00 2.71
142 143 6.954352 ACTACTCCCTCCTTTCTAAAATGT 57.046 37.500 0.00 0.00 0.00 2.71
143 144 7.883311 TCAAACTACTCCCTCCTTTCTAAAATG 59.117 37.037 0.00 0.00 0.00 2.32
144 145 7.985589 TCAAACTACTCCCTCCTTTCTAAAAT 58.014 34.615 0.00 0.00 0.00 1.82
145 146 7.383156 TCAAACTACTCCCTCCTTTCTAAAA 57.617 36.000 0.00 0.00 0.00 1.52
146 147 7.383156 TTCAAACTACTCCCTCCTTTCTAAA 57.617 36.000 0.00 0.00 0.00 1.85
147 148 7.383156 TTTCAAACTACTCCCTCCTTTCTAA 57.617 36.000 0.00 0.00 0.00 2.10
148 149 7.383156 TTTTCAAACTACTCCCTCCTTTCTA 57.617 36.000 0.00 0.00 0.00 2.10
149 150 5.906772 TTTCAAACTACTCCCTCCTTTCT 57.093 39.130 0.00 0.00 0.00 2.52
150 151 6.954487 TTTTTCAAACTACTCCCTCCTTTC 57.046 37.500 0.00 0.00 0.00 2.62
151 152 7.066781 TGATTTTTCAAACTACTCCCTCCTTT 58.933 34.615 0.00 0.00 0.00 3.11
152 153 6.610830 TGATTTTTCAAACTACTCCCTCCTT 58.389 36.000 0.00 0.00 0.00 3.36
153 154 6.200878 TGATTTTTCAAACTACTCCCTCCT 57.799 37.500 0.00 0.00 0.00 3.69
154 155 6.887002 AGATGATTTTTCAAACTACTCCCTCC 59.113 38.462 0.00 0.00 0.00 4.30
155 156 7.929941 AGATGATTTTTCAAACTACTCCCTC 57.070 36.000 0.00 0.00 0.00 4.30
156 157 9.981460 ATAAGATGATTTTTCAAACTACTCCCT 57.019 29.630 0.00 0.00 0.00 4.20
204 205 5.467035 AATCTTCCTTTCATCCGCAAAAA 57.533 34.783 0.00 0.00 0.00 1.94
205 206 5.467035 AAATCTTCCTTTCATCCGCAAAA 57.533 34.783 0.00 0.00 0.00 2.44
206 207 5.467035 AAAATCTTCCTTTCATCCGCAAA 57.533 34.783 0.00 0.00 0.00 3.68
207 208 6.582677 TTAAAATCTTCCTTTCATCCGCAA 57.417 33.333 0.00 0.00 0.00 4.85
208 209 6.773976 ATTAAAATCTTCCTTTCATCCGCA 57.226 33.333 0.00 0.00 0.00 5.69
209 210 7.257722 TGAATTAAAATCTTCCTTTCATCCGC 58.742 34.615 0.00 0.00 0.00 5.54
210 211 9.455847 GATGAATTAAAATCTTCCTTTCATCCG 57.544 33.333 10.23 0.00 40.60 4.18
218 219 9.705103 TCCTGATTGATGAATTAAAATCTTCCT 57.295 29.630 0.00 0.00 31.66 3.36
219 220 9.741647 GTCCTGATTGATGAATTAAAATCTTCC 57.258 33.333 0.00 0.00 31.66 3.46
227 228 9.904198 TGACTTATGTCCTGATTGATGAATTAA 57.096 29.630 6.32 0.00 42.28 1.40
229 230 8.991783 ATGACTTATGTCCTGATTGATGAATT 57.008 30.769 6.32 0.00 42.28 2.17
230 231 8.991783 AATGACTTATGTCCTGATTGATGAAT 57.008 30.769 6.32 0.00 42.28 2.57
231 232 8.270030 AGAATGACTTATGTCCTGATTGATGAA 58.730 33.333 6.32 0.00 42.28 2.57
232 233 7.799081 AGAATGACTTATGTCCTGATTGATGA 58.201 34.615 6.32 0.00 42.28 2.92
233 234 8.447924 AAGAATGACTTATGTCCTGATTGATG 57.552 34.615 6.32 0.00 42.28 3.07
234 235 9.553064 GTAAGAATGACTTATGTCCTGATTGAT 57.447 33.333 6.32 0.00 42.11 2.57
235 236 8.539544 TGTAAGAATGACTTATGTCCTGATTGA 58.460 33.333 6.32 0.00 42.11 2.57
236 237 8.722480 TGTAAGAATGACTTATGTCCTGATTG 57.278 34.615 6.32 0.00 42.11 2.67
237 238 9.739276 TTTGTAAGAATGACTTATGTCCTGATT 57.261 29.630 6.32 0.40 42.11 2.57
238 239 9.911788 ATTTGTAAGAATGACTTATGTCCTGAT 57.088 29.630 6.32 0.00 42.11 2.90
248 249 8.873830 CGTCACTGATATTTGTAAGAATGACTT 58.126 33.333 0.00 0.00 42.04 3.01
249 250 8.035394 ACGTCACTGATATTTGTAAGAATGACT 58.965 33.333 0.00 0.00 0.00 3.41
250 251 8.186178 ACGTCACTGATATTTGTAAGAATGAC 57.814 34.615 0.00 0.00 0.00 3.06
251 252 8.251026 AGACGTCACTGATATTTGTAAGAATGA 58.749 33.333 19.50 0.00 0.00 2.57
252 253 8.412608 AGACGTCACTGATATTTGTAAGAATG 57.587 34.615 19.50 0.00 0.00 2.67
253 254 7.707035 GGAGACGTCACTGATATTTGTAAGAAT 59.293 37.037 19.50 0.00 0.00 2.40
254 255 7.033791 GGAGACGTCACTGATATTTGTAAGAA 58.966 38.462 19.50 0.00 0.00 2.52
255 256 6.377429 AGGAGACGTCACTGATATTTGTAAGA 59.623 38.462 19.50 0.00 0.00 2.10
256 257 6.473778 CAGGAGACGTCACTGATATTTGTAAG 59.526 42.308 26.66 3.80 34.21 2.34
257 258 6.330278 CAGGAGACGTCACTGATATTTGTAA 58.670 40.000 26.66 0.00 34.21 2.41
258 259 5.163550 CCAGGAGACGTCACTGATATTTGTA 60.164 44.000 30.19 0.00 34.21 2.41
259 260 4.382040 CCAGGAGACGTCACTGATATTTGT 60.382 45.833 30.19 3.83 34.21 2.83
260 261 4.115516 CCAGGAGACGTCACTGATATTTG 58.884 47.826 30.19 15.49 34.21 2.32
261 262 3.769844 ACCAGGAGACGTCACTGATATTT 59.230 43.478 30.19 13.47 34.21 1.40
262 263 3.366396 ACCAGGAGACGTCACTGATATT 58.634 45.455 30.19 15.26 34.21 1.28
263 264 2.952978 GACCAGGAGACGTCACTGATAT 59.047 50.000 30.19 19.62 34.21 1.63
264 265 2.366533 GACCAGGAGACGTCACTGATA 58.633 52.381 30.19 0.00 34.21 2.15
265 266 1.178276 GACCAGGAGACGTCACTGAT 58.822 55.000 30.19 20.44 34.21 2.90
266 267 0.894184 GGACCAGGAGACGTCACTGA 60.894 60.000 30.19 0.00 34.21 3.41
267 268 1.587054 GGACCAGGAGACGTCACTG 59.413 63.158 24.87 24.87 0.00 3.66
268 269 1.606889 GGGACCAGGAGACGTCACT 60.607 63.158 19.50 12.63 29.40 3.41
269 270 2.971452 GGGACCAGGAGACGTCAC 59.029 66.667 19.50 11.89 0.00 3.67
270 271 2.675423 CGGGACCAGGAGACGTCA 60.675 66.667 19.50 0.00 0.00 4.35
271 272 1.975407 TTCGGGACCAGGAGACGTC 60.975 63.158 7.70 7.70 0.00 4.34
272 273 2.116772 TTCGGGACCAGGAGACGT 59.883 61.111 0.00 0.00 0.00 4.34
273 274 2.572284 GTTCGGGACCAGGAGACG 59.428 66.667 0.00 0.00 0.00 4.18
282 283 0.321034 GGTGTGGTTAGGTTCGGGAC 60.321 60.000 0.00 0.00 0.00 4.46
283 284 0.763604 TGGTGTGGTTAGGTTCGGGA 60.764 55.000 0.00 0.00 0.00 5.14
284 285 0.604511 GTGGTGTGGTTAGGTTCGGG 60.605 60.000 0.00 0.00 0.00 5.14
285 286 0.107081 TGTGGTGTGGTTAGGTTCGG 59.893 55.000 0.00 0.00 0.00 4.30
286 287 1.202604 ACTGTGGTGTGGTTAGGTTCG 60.203 52.381 0.00 0.00 0.00 3.95
287 288 2.218603 CACTGTGGTGTGGTTAGGTTC 58.781 52.381 0.00 0.00 38.54 3.62
288 289 1.749286 GCACTGTGGTGTGGTTAGGTT 60.749 52.381 10.21 0.00 44.65 3.50
289 290 0.179029 GCACTGTGGTGTGGTTAGGT 60.179 55.000 10.21 0.00 44.65 3.08
290 291 0.179032 TGCACTGTGGTGTGGTTAGG 60.179 55.000 10.21 0.00 44.65 2.69
291 292 1.333619 GTTGCACTGTGGTGTGGTTAG 59.666 52.381 10.21 0.00 44.65 2.34
292 293 1.384525 GTTGCACTGTGGTGTGGTTA 58.615 50.000 10.21 0.00 44.65 2.85
293 294 1.319614 GGTTGCACTGTGGTGTGGTT 61.320 55.000 10.21 0.00 44.65 3.67
294 295 1.752694 GGTTGCACTGTGGTGTGGT 60.753 57.895 10.21 0.00 44.65 4.16
295 296 1.037030 AAGGTTGCACTGTGGTGTGG 61.037 55.000 10.21 0.00 44.65 4.17
296 297 0.381801 GAAGGTTGCACTGTGGTGTG 59.618 55.000 10.21 0.00 44.65 3.82
297 298 0.751643 GGAAGGTTGCACTGTGGTGT 60.752 55.000 10.21 0.00 44.65 4.16
298 299 1.785041 CGGAAGGTTGCACTGTGGTG 61.785 60.000 10.21 0.00 45.53 4.17
299 300 1.525995 CGGAAGGTTGCACTGTGGT 60.526 57.895 10.21 0.00 0.00 4.16
300 301 1.507141 GACGGAAGGTTGCACTGTGG 61.507 60.000 10.21 0.00 0.00 4.17
301 302 1.507141 GGACGGAAGGTTGCACTGTG 61.507 60.000 2.76 2.76 0.00 3.66
302 303 1.227853 GGACGGAAGGTTGCACTGT 60.228 57.895 0.00 0.00 0.00 3.55
303 304 2.317609 CGGACGGAAGGTTGCACTG 61.318 63.158 0.00 0.00 0.00 3.66
304 305 2.030562 CGGACGGAAGGTTGCACT 59.969 61.111 0.00 0.00 0.00 4.40
305 306 2.280592 ACGGACGGAAGGTTGCAC 60.281 61.111 0.00 0.00 0.00 4.57
306 307 1.180456 TAGACGGACGGAAGGTTGCA 61.180 55.000 0.00 0.00 0.00 4.08
307 308 0.037975 TTAGACGGACGGAAGGTTGC 60.038 55.000 0.00 0.00 0.00 4.17
308 309 2.029649 TCTTTAGACGGACGGAAGGTTG 60.030 50.000 0.00 0.00 0.00 3.77
309 310 2.242043 TCTTTAGACGGACGGAAGGTT 58.758 47.619 0.00 0.00 0.00 3.50
310 311 1.915141 TCTTTAGACGGACGGAAGGT 58.085 50.000 0.00 0.00 0.00 3.50
311 312 2.416972 CCTTCTTTAGACGGACGGAAGG 60.417 54.545 9.58 9.58 42.12 3.46
312 313 2.877335 CCTTCTTTAGACGGACGGAAG 58.123 52.381 0.00 0.00 35.67 3.46
313 314 1.067354 GCCTTCTTTAGACGGACGGAA 60.067 52.381 6.47 0.00 35.67 4.30
314 315 0.529378 GCCTTCTTTAGACGGACGGA 59.471 55.000 6.47 0.00 35.67 4.69
315 316 0.531200 AGCCTTCTTTAGACGGACGG 59.469 55.000 6.47 0.00 35.67 4.79
316 317 2.681848 TCTAGCCTTCTTTAGACGGACG 59.318 50.000 6.47 0.00 35.67 4.79
317 318 4.922471 ATCTAGCCTTCTTTAGACGGAC 57.078 45.455 6.47 0.00 35.67 4.79
318 319 6.015350 CCATTATCTAGCCTTCTTTAGACGGA 60.015 42.308 6.47 0.00 35.67 4.69
319 320 6.159988 CCATTATCTAGCCTTCTTTAGACGG 58.840 44.000 0.00 0.00 36.62 4.79
320 321 5.635700 GCCATTATCTAGCCTTCTTTAGACG 59.364 44.000 0.00 0.00 0.00 4.18
321 322 6.764379 AGCCATTATCTAGCCTTCTTTAGAC 58.236 40.000 0.00 0.00 0.00 2.59
322 323 7.147479 ACAAGCCATTATCTAGCCTTCTTTAGA 60.147 37.037 0.00 0.00 0.00 2.10
323 324 6.995091 ACAAGCCATTATCTAGCCTTCTTTAG 59.005 38.462 0.00 0.00 0.00 1.85
324 325 6.900194 ACAAGCCATTATCTAGCCTTCTTTA 58.100 36.000 0.00 0.00 0.00 1.85
325 326 5.760131 ACAAGCCATTATCTAGCCTTCTTT 58.240 37.500 0.00 0.00 0.00 2.52
326 327 5.379706 ACAAGCCATTATCTAGCCTTCTT 57.620 39.130 0.00 0.00 0.00 2.52
327 328 6.270927 TGATACAAGCCATTATCTAGCCTTCT 59.729 38.462 0.00 0.00 0.00 2.85
328 329 6.467677 TGATACAAGCCATTATCTAGCCTTC 58.532 40.000 0.00 0.00 0.00 3.46
329 330 6.439636 TGATACAAGCCATTATCTAGCCTT 57.560 37.500 0.00 0.00 0.00 4.35
330 331 6.633325 ATGATACAAGCCATTATCTAGCCT 57.367 37.500 0.00 0.00 0.00 4.58
331 332 7.693969 AAATGATACAAGCCATTATCTAGCC 57.306 36.000 0.00 0.00 33.13 3.93
332 333 8.571336 ACAAAATGATACAAGCCATTATCTAGC 58.429 33.333 0.00 0.00 33.13 3.42
335 336 8.416329 GGAACAAAATGATACAAGCCATTATCT 58.584 33.333 0.00 0.00 33.13 1.98
336 337 7.653311 GGGAACAAAATGATACAAGCCATTATC 59.347 37.037 0.00 0.00 33.13 1.75
337 338 7.345392 AGGGAACAAAATGATACAAGCCATTAT 59.655 33.333 0.00 0.00 33.13 1.28
338 339 6.667414 AGGGAACAAAATGATACAAGCCATTA 59.333 34.615 0.00 0.00 33.13 1.90
339 340 5.484998 AGGGAACAAAATGATACAAGCCATT 59.515 36.000 0.00 0.00 34.75 3.16
340 341 5.025453 AGGGAACAAAATGATACAAGCCAT 58.975 37.500 0.00 0.00 0.00 4.40
341 342 4.415596 AGGGAACAAAATGATACAAGCCA 58.584 39.130 0.00 0.00 0.00 4.75
342 343 5.448632 CGTAGGGAACAAAATGATACAAGCC 60.449 44.000 0.00 0.00 0.00 4.35
343 344 5.353123 TCGTAGGGAACAAAATGATACAAGC 59.647 40.000 0.00 0.00 0.00 4.01
344 345 6.978343 TCGTAGGGAACAAAATGATACAAG 57.022 37.500 0.00 0.00 0.00 3.16
358 359 4.215908 AGCTATCTCATGTTCGTAGGGAA 58.784 43.478 0.00 0.00 0.00 3.97
359 360 3.833732 AGCTATCTCATGTTCGTAGGGA 58.166 45.455 0.00 0.00 0.00 4.20
360 361 4.592485 AAGCTATCTCATGTTCGTAGGG 57.408 45.455 0.00 0.00 0.00 3.53
361 362 5.631512 GCTAAAGCTATCTCATGTTCGTAGG 59.368 44.000 0.00 0.00 38.21 3.18
362 363 5.631512 GGCTAAAGCTATCTCATGTTCGTAG 59.368 44.000 1.39 0.00 41.70 3.51
363 364 5.529791 GGCTAAAGCTATCTCATGTTCGTA 58.470 41.667 1.39 0.00 41.70 3.43
364 365 4.372656 GGCTAAAGCTATCTCATGTTCGT 58.627 43.478 1.39 0.00 41.70 3.85
365 366 3.426859 CGGCTAAAGCTATCTCATGTTCG 59.573 47.826 1.39 0.00 41.70 3.95
366 367 4.621991 TCGGCTAAAGCTATCTCATGTTC 58.378 43.478 1.39 0.00 41.70 3.18
367 368 4.672587 TCGGCTAAAGCTATCTCATGTT 57.327 40.909 1.39 0.00 41.70 2.71
368 369 4.141937 TGTTCGGCTAAAGCTATCTCATGT 60.142 41.667 1.39 0.00 41.70 3.21
369 370 4.371786 TGTTCGGCTAAAGCTATCTCATG 58.628 43.478 1.39 0.00 41.70 3.07
370 371 4.672587 TGTTCGGCTAAAGCTATCTCAT 57.327 40.909 1.39 0.00 41.70 2.90
371 372 4.099419 TCATGTTCGGCTAAAGCTATCTCA 59.901 41.667 1.39 0.00 41.70 3.27
372 373 4.621991 TCATGTTCGGCTAAAGCTATCTC 58.378 43.478 1.39 0.00 41.70 2.75
373 374 4.672587 TCATGTTCGGCTAAAGCTATCT 57.327 40.909 1.39 0.00 41.70 1.98
374 375 5.931441 ATTCATGTTCGGCTAAAGCTATC 57.069 39.130 1.39 0.00 41.70 2.08
375 376 7.986085 AATATTCATGTTCGGCTAAAGCTAT 57.014 32.000 1.39 0.00 41.70 2.97
376 377 7.801716 AAATATTCATGTTCGGCTAAAGCTA 57.198 32.000 1.39 0.00 41.70 3.32
377 378 6.699575 AAATATTCATGTTCGGCTAAAGCT 57.300 33.333 1.39 0.00 41.70 3.74
378 379 8.129211 AGTTAAATATTCATGTTCGGCTAAAGC 58.871 33.333 0.00 0.00 41.14 3.51
383 384 8.952278 TGTTTAGTTAAATATTCATGTTCGGCT 58.048 29.630 0.00 0.00 0.00 5.52
384 385 9.730420 ATGTTTAGTTAAATATTCATGTTCGGC 57.270 29.630 0.00 0.00 0.00 5.54
406 407 9.889128 CCAAACATTTCCCTAAATATTCATGTT 57.111 29.630 0.00 0.00 33.45 2.71
407 408 7.986889 GCCAAACATTTCCCTAAATATTCATGT 59.013 33.333 0.00 0.00 33.45 3.21
408 409 8.206189 AGCCAAACATTTCCCTAAATATTCATG 58.794 33.333 0.00 0.00 33.45 3.07
409 410 8.322905 AGCCAAACATTTCCCTAAATATTCAT 57.677 30.769 0.00 0.00 33.45 2.57
410 411 7.732222 AGCCAAACATTTCCCTAAATATTCA 57.268 32.000 0.00 0.00 33.45 2.57
413 414 9.267071 ACTAAAGCCAAACATTTCCCTAAATAT 57.733 29.630 0.00 0.00 33.45 1.28
414 415 8.658840 ACTAAAGCCAAACATTTCCCTAAATA 57.341 30.769 0.00 0.00 33.45 1.40
415 416 7.553504 ACTAAAGCCAAACATTTCCCTAAAT 57.446 32.000 0.00 0.00 35.65 1.40
416 417 6.987403 ACTAAAGCCAAACATTTCCCTAAA 57.013 33.333 0.00 0.00 0.00 1.85
417 418 6.551601 TCAACTAAAGCCAAACATTTCCCTAA 59.448 34.615 0.00 0.00 0.00 2.69
418 419 6.015772 GTCAACTAAAGCCAAACATTTCCCTA 60.016 38.462 0.00 0.00 0.00 3.53
419 420 4.898861 TCAACTAAAGCCAAACATTTCCCT 59.101 37.500 0.00 0.00 0.00 4.20
420 421 4.988540 GTCAACTAAAGCCAAACATTTCCC 59.011 41.667 0.00 0.00 0.00 3.97
421 422 4.679654 CGTCAACTAAAGCCAAACATTTCC 59.320 41.667 0.00 0.00 0.00 3.13
422 423 4.679654 CCGTCAACTAAAGCCAAACATTTC 59.320 41.667 0.00 0.00 0.00 2.17
423 424 4.339814 TCCGTCAACTAAAGCCAAACATTT 59.660 37.500 0.00 0.00 0.00 2.32
424 425 3.886505 TCCGTCAACTAAAGCCAAACATT 59.113 39.130 0.00 0.00 0.00 2.71
425 426 3.482436 TCCGTCAACTAAAGCCAAACAT 58.518 40.909 0.00 0.00 0.00 2.71
426 427 2.920524 TCCGTCAACTAAAGCCAAACA 58.079 42.857 0.00 0.00 0.00 2.83
427 428 3.500680 TGATCCGTCAACTAAAGCCAAAC 59.499 43.478 0.00 0.00 0.00 2.93
428 429 3.500680 GTGATCCGTCAACTAAAGCCAAA 59.499 43.478 0.00 0.00 35.80 3.28
429 430 3.071479 GTGATCCGTCAACTAAAGCCAA 58.929 45.455 0.00 0.00 35.80 4.52
430 431 2.037902 TGTGATCCGTCAACTAAAGCCA 59.962 45.455 0.00 0.00 35.80 4.75
431 432 2.695359 TGTGATCCGTCAACTAAAGCC 58.305 47.619 0.00 0.00 35.80 4.35
432 433 3.424962 GCTTGTGATCCGTCAACTAAAGC 60.425 47.826 0.00 0.00 35.80 3.51
433 434 3.181530 CGCTTGTGATCCGTCAACTAAAG 60.182 47.826 0.00 0.00 35.80 1.85
434 435 2.734606 CGCTTGTGATCCGTCAACTAAA 59.265 45.455 0.00 0.00 35.80 1.85
435 436 2.288579 ACGCTTGTGATCCGTCAACTAA 60.289 45.455 0.00 0.00 35.80 2.24
436 437 1.271379 ACGCTTGTGATCCGTCAACTA 59.729 47.619 0.00 0.00 35.80 2.24
437 438 0.033504 ACGCTTGTGATCCGTCAACT 59.966 50.000 0.00 0.00 35.80 3.16
438 439 0.163788 CACGCTTGTGATCCGTCAAC 59.836 55.000 0.00 0.00 46.91 3.18
439 440 2.527671 CACGCTTGTGATCCGTCAA 58.472 52.632 0.00 0.00 46.91 3.18
440 441 4.260194 CACGCTTGTGATCCGTCA 57.740 55.556 0.00 0.00 46.91 4.35
454 455 4.514577 AAGGCGGCGGATCTCACG 62.515 66.667 9.78 0.00 0.00 4.35
455 456 2.586357 GAAGGCGGCGGATCTCAC 60.586 66.667 9.78 0.00 0.00 3.51
456 457 2.759973 AGAAGGCGGCGGATCTCA 60.760 61.111 9.78 0.00 0.00 3.27
457 458 1.173444 TAGAGAAGGCGGCGGATCTC 61.173 60.000 24.61 24.61 38.84 2.75
458 459 0.540830 ATAGAGAAGGCGGCGGATCT 60.541 55.000 9.78 13.24 0.00 2.75
459 460 0.389166 CATAGAGAAGGCGGCGGATC 60.389 60.000 9.78 3.71 0.00 3.36
460 461 1.115930 ACATAGAGAAGGCGGCGGAT 61.116 55.000 9.78 0.00 0.00 4.18
461 462 1.735376 GACATAGAGAAGGCGGCGGA 61.735 60.000 9.78 0.00 0.00 5.54
462 463 1.300233 GACATAGAGAAGGCGGCGG 60.300 63.158 9.78 0.00 0.00 6.13
463 464 0.872021 GTGACATAGAGAAGGCGGCG 60.872 60.000 0.51 0.51 0.00 6.46
464 465 0.872021 CGTGACATAGAGAAGGCGGC 60.872 60.000 0.00 0.00 0.00 6.53
465 466 0.738975 TCGTGACATAGAGAAGGCGG 59.261 55.000 0.00 0.00 0.00 6.13
466 467 1.402259 ACTCGTGACATAGAGAAGGCG 59.598 52.381 15.11 0.00 37.87 5.52
467 468 2.164624 ACACTCGTGACATAGAGAAGGC 59.835 50.000 15.11 0.00 37.87 4.35
468 469 3.692101 AGACACTCGTGACATAGAGAAGG 59.308 47.826 15.11 8.30 37.87 3.46
469 470 4.955925 AGACACTCGTGACATAGAGAAG 57.044 45.455 15.11 10.35 37.87 2.85
470 471 5.707242 AAAGACACTCGTGACATAGAGAA 57.293 39.130 15.11 0.00 37.87 2.87
471 472 5.461526 CAAAAGACACTCGTGACATAGAGA 58.538 41.667 15.11 0.00 37.87 3.10
472 473 4.623167 CCAAAAGACACTCGTGACATAGAG 59.377 45.833 3.74 8.73 40.16 2.43
473 474 4.556233 CCAAAAGACACTCGTGACATAGA 58.444 43.478 3.74 0.00 0.00 1.98
474 475 3.679980 CCCAAAAGACACTCGTGACATAG 59.320 47.826 3.74 0.00 0.00 2.23
475 476 3.070446 ACCCAAAAGACACTCGTGACATA 59.930 43.478 3.74 0.00 0.00 2.29
476 477 2.158813 ACCCAAAAGACACTCGTGACAT 60.159 45.455 3.74 0.00 0.00 3.06
477 478 1.208535 ACCCAAAAGACACTCGTGACA 59.791 47.619 3.74 0.00 0.00 3.58
478 479 1.597663 CACCCAAAAGACACTCGTGAC 59.402 52.381 3.74 0.00 0.00 3.67
479 480 1.208535 ACACCCAAAAGACACTCGTGA 59.791 47.619 3.74 0.00 0.00 4.35
480 481 1.597663 GACACCCAAAAGACACTCGTG 59.402 52.381 0.00 0.00 0.00 4.35
481 482 1.485066 AGACACCCAAAAGACACTCGT 59.515 47.619 0.00 0.00 0.00 4.18
482 483 2.240493 AGACACCCAAAAGACACTCG 57.760 50.000 0.00 0.00 0.00 4.18
483 484 3.809905 AGAAGACACCCAAAAGACACTC 58.190 45.455 0.00 0.00 0.00 3.51
484 485 3.456277 AGAGAAGACACCCAAAAGACACT 59.544 43.478 0.00 0.00 0.00 3.55
485 486 3.809905 AGAGAAGACACCCAAAAGACAC 58.190 45.455 0.00 0.00 0.00 3.67
486 487 3.711704 AGAGAGAAGACACCCAAAAGACA 59.288 43.478 0.00 0.00 0.00 3.41
487 488 4.039852 AGAGAGAGAAGACACCCAAAAGAC 59.960 45.833 0.00 0.00 0.00 3.01
488 489 4.227197 AGAGAGAGAAGACACCCAAAAGA 58.773 43.478 0.00 0.00 0.00 2.52
489 490 4.615588 AGAGAGAGAAGACACCCAAAAG 57.384 45.455 0.00 0.00 0.00 2.27
490 491 5.373812 AAAGAGAGAGAAGACACCCAAAA 57.626 39.130 0.00 0.00 0.00 2.44
491 492 5.373812 AAAAGAGAGAGAAGACACCCAAA 57.626 39.130 0.00 0.00 0.00 3.28
492 493 5.373812 AAAAAGAGAGAGAAGACACCCAA 57.626 39.130 0.00 0.00 0.00 4.12
513 514 2.660715 CGCGCATAATGTTGCAGAAAAA 59.339 40.909 8.75 0.00 42.91 1.94
514 515 2.249337 CGCGCATAATGTTGCAGAAAA 58.751 42.857 8.75 0.00 42.91 2.29
515 516 1.198867 ACGCGCATAATGTTGCAGAAA 59.801 42.857 5.73 0.00 42.91 2.52
516 517 0.801872 ACGCGCATAATGTTGCAGAA 59.198 45.000 5.73 0.00 42.91 3.02
517 518 0.801872 AACGCGCATAATGTTGCAGA 59.198 45.000 5.73 0.00 42.91 4.26
518 519 0.909174 CAACGCGCATAATGTTGCAG 59.091 50.000 5.73 0.00 42.91 4.41
519 520 0.239613 ACAACGCGCATAATGTTGCA 59.760 45.000 20.39 0.00 45.18 4.08
520 521 2.166741 TACAACGCGCATAATGTTGC 57.833 45.000 20.39 0.00 45.18 4.17
521 522 5.678910 ATTTTACAACGCGCATAATGTTG 57.321 34.783 19.30 19.30 46.36 3.33
522 523 5.631512 ACAATTTTACAACGCGCATAATGTT 59.368 32.000 5.73 0.00 0.00 2.71
523 524 5.157781 ACAATTTTACAACGCGCATAATGT 58.842 33.333 5.73 8.88 0.00 2.71
524 525 5.511377 AGACAATTTTACAACGCGCATAATG 59.489 36.000 5.73 2.39 0.00 1.90
525 526 5.636837 AGACAATTTTACAACGCGCATAAT 58.363 33.333 5.73 0.00 0.00 1.28
526 527 5.037015 AGACAATTTTACAACGCGCATAA 57.963 34.783 5.73 0.00 0.00 1.90
527 528 4.671880 AGACAATTTTACAACGCGCATA 57.328 36.364 5.73 0.00 0.00 3.14
528 529 3.552604 AGACAATTTTACAACGCGCAT 57.447 38.095 5.73 0.00 0.00 4.73
529 530 3.341857 AAGACAATTTTACAACGCGCA 57.658 38.095 5.73 0.00 0.00 6.09
530 531 4.433079 CAAAAGACAATTTTACAACGCGC 58.567 39.130 5.73 0.00 0.00 6.86
531 532 4.027295 TGCAAAAGACAATTTTACAACGCG 60.027 37.500 3.53 3.53 0.00 6.01
532 533 5.382573 TGCAAAAGACAATTTTACAACGC 57.617 34.783 0.00 0.00 0.00 4.84
533 534 6.756176 TGTTGCAAAAGACAATTTTACAACG 58.244 32.000 17.63 0.00 38.62 4.10
534 535 8.012241 TGTTGTTGCAAAAGACAATTTTACAAC 58.988 29.630 16.67 16.67 37.98 3.32
535 536 8.012241 GTGTTGTTGCAAAAGACAATTTTACAA 58.988 29.630 0.00 0.00 37.98 2.41
536 537 7.386299 AGTGTTGTTGCAAAAGACAATTTTACA 59.614 29.630 17.42 5.83 37.98 2.41
537 538 7.738345 AGTGTTGTTGCAAAAGACAATTTTAC 58.262 30.769 17.42 10.19 37.98 2.01
538 539 7.600375 TGAGTGTTGTTGCAAAAGACAATTTTA 59.400 29.630 17.42 6.05 37.98 1.52
539 540 6.426328 TGAGTGTTGTTGCAAAAGACAATTTT 59.574 30.769 17.42 4.21 37.98 1.82
540 541 5.931146 TGAGTGTTGTTGCAAAAGACAATTT 59.069 32.000 17.42 7.22 37.98 1.82
541 542 5.477510 TGAGTGTTGTTGCAAAAGACAATT 58.522 33.333 17.42 8.93 37.98 2.32
542 543 5.070770 TGAGTGTTGTTGCAAAAGACAAT 57.929 34.783 17.42 14.03 37.98 2.71
543 544 4.511617 TGAGTGTTGTTGCAAAAGACAA 57.488 36.364 17.42 9.94 33.67 3.18
544 545 4.082300 ACATGAGTGTTGTTGCAAAAGACA 60.082 37.500 17.42 12.78 34.01 3.41
545 546 4.423732 ACATGAGTGTTGTTGCAAAAGAC 58.576 39.130 0.00 7.08 34.01 3.01
546 547 4.717233 ACATGAGTGTTGTTGCAAAAGA 57.283 36.364 0.00 0.00 34.01 2.52
581 582 9.337396 TGATGTCGTAGAAAATATAGGCATTTT 57.663 29.630 0.00 0.00 39.69 1.82
582 583 8.902540 TGATGTCGTAGAAAATATAGGCATTT 57.097 30.769 0.00 0.00 39.69 2.32
583 584 9.507329 AATGATGTCGTAGAAAATATAGGCATT 57.493 29.630 0.00 0.00 39.69 3.56
584 585 9.507329 AAATGATGTCGTAGAAAATATAGGCAT 57.493 29.630 0.00 0.00 39.69 4.40
585 586 8.773645 CAAATGATGTCGTAGAAAATATAGGCA 58.226 33.333 0.00 0.00 39.69 4.75
586 587 8.774586 ACAAATGATGTCGTAGAAAATATAGGC 58.225 33.333 0.00 0.00 37.96 3.93
601 602 8.555166 TTTCTTTTTACGACACAAATGATGTC 57.445 30.769 0.00 0.00 41.46 3.06
602 603 9.180678 GATTTCTTTTTACGACACAAATGATGT 57.819 29.630 0.00 0.00 45.34 3.06
603 604 8.638565 GGATTTCTTTTTACGACACAAATGATG 58.361 33.333 0.00 0.00 0.00 3.07
604 605 7.537306 CGGATTTCTTTTTACGACACAAATGAT 59.463 33.333 0.00 0.00 0.00 2.45
605 606 6.853872 CGGATTTCTTTTTACGACACAAATGA 59.146 34.615 0.00 0.00 0.00 2.57
606 607 6.635239 ACGGATTTCTTTTTACGACACAAATG 59.365 34.615 0.00 0.00 0.00 2.32
607 608 6.731164 ACGGATTTCTTTTTACGACACAAAT 58.269 32.000 0.00 0.00 0.00 2.32
608 609 6.121613 ACGGATTTCTTTTTACGACACAAA 57.878 33.333 0.00 0.00 0.00 2.83
609 610 5.738118 ACGGATTTCTTTTTACGACACAA 57.262 34.783 0.00 0.00 0.00 3.33
610 611 5.752472 TGTACGGATTTCTTTTTACGACACA 59.248 36.000 0.00 0.00 0.00 3.72
611 612 6.214205 TGTACGGATTTCTTTTTACGACAC 57.786 37.500 0.00 0.00 0.00 3.67
612 613 6.645827 TCATGTACGGATTTCTTTTTACGACA 59.354 34.615 0.00 0.00 0.00 4.35
613 614 6.952083 GTCATGTACGGATTTCTTTTTACGAC 59.048 38.462 0.00 0.00 0.00 4.34
614 615 6.645827 TGTCATGTACGGATTTCTTTTTACGA 59.354 34.615 0.00 0.00 0.00 3.43
615 616 6.823531 TGTCATGTACGGATTTCTTTTTACG 58.176 36.000 0.00 0.00 0.00 3.18
616 617 8.071368 TGTTGTCATGTACGGATTTCTTTTTAC 58.929 33.333 0.00 0.00 0.00 2.01
617 618 8.071368 GTGTTGTCATGTACGGATTTCTTTTTA 58.929 33.333 0.00 0.00 0.00 1.52
618 619 6.915843 GTGTTGTCATGTACGGATTTCTTTTT 59.084 34.615 0.00 0.00 0.00 1.94
619 620 6.435428 GTGTTGTCATGTACGGATTTCTTTT 58.565 36.000 0.00 0.00 0.00 2.27
620 621 5.048991 GGTGTTGTCATGTACGGATTTCTTT 60.049 40.000 0.00 0.00 0.00 2.52
621 622 4.454504 GGTGTTGTCATGTACGGATTTCTT 59.545 41.667 0.00 0.00 0.00 2.52
622 623 4.000988 GGTGTTGTCATGTACGGATTTCT 58.999 43.478 0.00 0.00 0.00 2.52
623 624 3.126343 GGGTGTTGTCATGTACGGATTTC 59.874 47.826 0.00 0.00 0.00 2.17
624 625 3.078837 GGGTGTTGTCATGTACGGATTT 58.921 45.455 0.00 0.00 0.00 2.17
625 626 2.039216 TGGGTGTTGTCATGTACGGATT 59.961 45.455 0.00 0.00 0.00 3.01
626 627 1.626321 TGGGTGTTGTCATGTACGGAT 59.374 47.619 0.00 0.00 0.00 4.18
627 628 1.049402 TGGGTGTTGTCATGTACGGA 58.951 50.000 0.00 0.00 0.00 4.69
628 629 1.737236 CATGGGTGTTGTCATGTACGG 59.263 52.381 0.00 0.00 36.82 4.02
640 641 2.043625 CAGCTTGCAACATGGGTGT 58.956 52.632 0.00 0.00 41.28 4.16
641 642 1.373748 GCAGCTTGCAACATGGGTG 60.374 57.895 10.33 10.33 44.26 4.61
642 643 3.053828 GCAGCTTGCAACATGGGT 58.946 55.556 0.00 0.00 44.26 4.51
651 652 1.999048 TTAATGTGCATGCAGCTTGC 58.001 45.000 23.41 23.22 45.94 4.01
652 653 4.430007 AGATTTAATGTGCATGCAGCTTG 58.570 39.130 23.41 3.85 45.94 4.01
653 654 4.730949 AGATTTAATGTGCATGCAGCTT 57.269 36.364 23.41 19.09 45.94 3.74
654 655 5.533528 TGATAGATTTAATGTGCATGCAGCT 59.466 36.000 23.41 10.99 45.94 4.24
655 656 5.765176 TGATAGATTTAATGTGCATGCAGC 58.235 37.500 23.41 16.34 45.96 5.25
656 657 8.812147 AAATGATAGATTTAATGTGCATGCAG 57.188 30.769 23.41 0.00 0.00 4.41
657 658 9.602568 AAAAATGATAGATTTAATGTGCATGCA 57.397 25.926 18.46 18.46 0.00 3.96
680 681 5.302568 CCATGCTAGGATGGCTGATTAAAAA 59.697 40.000 27.89 0.00 46.01 1.94
681 682 4.828939 CCATGCTAGGATGGCTGATTAAAA 59.171 41.667 27.89 0.00 46.01 1.52
682 683 4.104579 TCCATGCTAGGATGGCTGATTAAA 59.895 41.667 32.49 14.36 46.01 1.52
683 684 3.652387 TCCATGCTAGGATGGCTGATTAA 59.348 43.478 32.49 15.04 46.01 1.40
684 685 3.250617 TCCATGCTAGGATGGCTGATTA 58.749 45.455 32.49 15.71 46.01 1.75
685 686 2.040012 CTCCATGCTAGGATGGCTGATT 59.960 50.000 32.49 0.00 46.01 2.57
686 687 1.629353 CTCCATGCTAGGATGGCTGAT 59.371 52.381 32.49 0.00 46.01 2.90
687 688 1.054231 CTCCATGCTAGGATGGCTGA 58.946 55.000 32.49 18.21 46.01 4.26
688 689 0.605860 GCTCCATGCTAGGATGGCTG 60.606 60.000 32.49 26.80 46.01 4.85
689 690 1.058428 TGCTCCATGCTAGGATGGCT 61.058 55.000 32.49 0.00 46.01 4.75
690 691 0.037877 ATGCTCCATGCTAGGATGGC 59.962 55.000 32.49 23.54 46.05 4.40
691 692 1.822506 CATGCTCCATGCTAGGATGG 58.177 55.000 31.75 31.75 43.96 3.51
707 708 1.524393 TCATACGCAGCAGGGCATG 60.524 57.895 0.00 0.00 33.88 4.06
708 709 1.524621 GTCATACGCAGCAGGGCAT 60.525 57.895 0.00 0.00 0.00 4.40
709 710 2.125147 GTCATACGCAGCAGGGCA 60.125 61.111 0.00 0.00 0.00 5.36
710 711 1.709147 CTTGTCATACGCAGCAGGGC 61.709 60.000 0.00 0.00 0.00 5.19
711 712 0.391661 ACTTGTCATACGCAGCAGGG 60.392 55.000 0.00 0.00 0.00 4.45
712 713 0.723414 CACTTGTCATACGCAGCAGG 59.277 55.000 0.00 0.00 0.00 4.85
713 714 1.713597 TCACTTGTCATACGCAGCAG 58.286 50.000 0.00 0.00 0.00 4.24
714 715 2.068519 CTTCACTTGTCATACGCAGCA 58.931 47.619 0.00 0.00 0.00 4.41
715 716 2.092838 GTCTTCACTTGTCATACGCAGC 59.907 50.000 0.00 0.00 0.00 5.25
716 717 3.121944 GTGTCTTCACTTGTCATACGCAG 59.878 47.826 0.00 0.00 40.98 5.18
717 718 3.057019 GTGTCTTCACTTGTCATACGCA 58.943 45.455 0.00 0.00 40.98 5.24
718 719 3.057019 TGTGTCTTCACTTGTCATACGC 58.943 45.455 0.00 0.00 44.14 4.42
719 720 5.651172 TTTGTGTCTTCACTTGTCATACG 57.349 39.130 0.00 0.00 44.14 3.06
723 724 9.868277 AAAATAATTTTGTGTCTTCACTTGTCA 57.132 25.926 0.00 0.00 44.14 3.58
754 758 1.587043 GGGCGCCTTCAAGTTTCTCC 61.587 60.000 28.56 0.00 0.00 3.71
794 798 2.171870 TCGTCTCCAAAGGAAAGTGGTT 59.828 45.455 0.00 0.00 36.23 3.67
803 807 0.250295 TGCAAGGTCGTCTCCAAAGG 60.250 55.000 0.00 0.00 0.00 3.11
818 822 1.987704 GCCGACGCCATACATTGCAA 61.988 55.000 0.00 0.00 0.00 4.08
819 823 2.468670 GCCGACGCCATACATTGCA 61.469 57.895 0.00 0.00 0.00 4.08
820 824 1.714899 AAGCCGACGCCATACATTGC 61.715 55.000 0.00 0.00 34.57 3.56
821 825 0.304705 GAAGCCGACGCCATACATTG 59.695 55.000 0.00 0.00 34.57 2.82
822 826 0.814010 GGAAGCCGACGCCATACATT 60.814 55.000 0.00 0.00 34.57 2.71
823 827 1.227556 GGAAGCCGACGCCATACAT 60.228 57.895 0.00 0.00 34.57 2.29
836 840 0.392327 GCCTCTGGAGACTTGGAAGC 60.392 60.000 0.00 0.00 0.00 3.86
849 853 1.078567 GCCTCTGAACCTGCCTCTG 60.079 63.158 0.00 0.00 0.00 3.35
891 896 1.834263 GATGCCTTCAGAGTACCCAGT 59.166 52.381 0.00 0.00 0.00 4.00
892 897 2.114616 AGATGCCTTCAGAGTACCCAG 58.885 52.381 0.00 0.00 0.00 4.45
893 898 2.254152 AGATGCCTTCAGAGTACCCA 57.746 50.000 0.00 0.00 0.00 4.51
894 899 3.186702 GAAGATGCCTTCAGAGTACCC 57.813 52.381 0.00 0.00 46.18 3.69
915 920 3.057019 CAAATCACCGTTGACTCGAAGA 58.943 45.455 0.00 0.00 33.38 2.87
921 926 0.593128 GCAGCAAATCACCGTTGACT 59.407 50.000 0.00 0.00 33.38 3.41
954 959 2.100603 GTCGAGAGGAAGACGCCG 59.899 66.667 0.00 0.00 0.00 6.46
1266 1271 1.758514 GCCGAGGTGGAGGATGAGA 60.759 63.158 0.00 0.00 42.00 3.27
1765 1770 4.394712 CAGGCGGCGGAAGAAGGT 62.395 66.667 9.78 0.00 0.00 3.50
1833 1838 1.153939 CTTGGAGTGGAGCGACTCG 60.154 63.158 6.57 0.00 42.97 4.18
1941 1946 2.047655 TTGTAGCGTCCCTTGCCG 60.048 61.111 0.00 0.00 0.00 5.69
2897 2902 1.612442 AGCCTCCACCGCTTCCTAA 60.612 57.895 0.00 0.00 30.57 2.69
3075 3080 4.772231 AGCTTGGCCCTGGCATGG 62.772 66.667 10.86 4.21 44.11 3.66
3196 3201 5.971493 AGGGAGCTTAGTGTTATAGAGGAT 58.029 41.667 0.00 0.00 0.00 3.24
3201 3206 9.352191 TCTAAACTAGGGAGCTTAGTGTTATAG 57.648 37.037 0.00 0.81 31.96 1.31
3240 3245 9.709495 TGACCCAATTTTAATTGAAAATCTCAG 57.291 29.630 15.02 0.00 45.21 3.35
3288 3293 9.774413 AATTGAATGAGAAAGCTTTGAGAAATT 57.226 25.926 18.30 8.88 0.00 1.82
3289 3294 9.420551 GAATTGAATGAGAAAGCTTTGAGAAAT 57.579 29.630 18.30 4.56 0.00 2.17
3290 3295 8.636213 AGAATTGAATGAGAAAGCTTTGAGAAA 58.364 29.630 18.30 2.34 0.00 2.52
3291 3296 8.174733 AGAATTGAATGAGAAAGCTTTGAGAA 57.825 30.769 18.30 0.00 0.00 2.87
3320 3325 6.459710 GCCTTACAAATTAGGAAGCATGGTAC 60.460 42.308 0.00 0.00 33.13 3.34
3324 3329 4.646492 AGGCCTTACAAATTAGGAAGCATG 59.354 41.667 0.00 0.00 33.13 4.06
3326 3331 4.316025 AGGCCTTACAAATTAGGAAGCA 57.684 40.909 0.00 0.00 33.13 3.91
3333 3338 9.181061 GAGTAAATACCAAGGCCTTACAAATTA 57.819 33.333 20.00 12.23 0.00 1.40
3334 3339 7.893833 AGAGTAAATACCAAGGCCTTACAAATT 59.106 33.333 20.00 12.55 0.00 1.82
3335 3340 7.410991 AGAGTAAATACCAAGGCCTTACAAAT 58.589 34.615 20.00 6.82 0.00 2.32
3375 3390 5.236047 GCTGATCCTAAGACAAATGCTACAG 59.764 44.000 0.00 0.00 0.00 2.74
3417 3432 7.587028 CGGTAGAGTAATTTAGACGAATCACTC 59.413 40.741 0.00 0.00 33.08 3.51
3420 3435 7.412853 GTCGGTAGAGTAATTTAGACGAATCA 58.587 38.462 0.00 0.00 0.00 2.57
3460 3475 6.739331 AGAGGACTTATAAACCAGGATGAG 57.261 41.667 0.00 0.00 39.69 2.90
3461 3476 7.037586 ACAAAGAGGACTTATAAACCAGGATGA 60.038 37.037 0.00 0.00 34.47 2.92
3635 3650 8.102047 TCTTTGTATTCCATGCCAAATTTTGAT 58.898 29.630 10.72 0.00 0.00 2.57
3641 3656 5.127682 GTCCTCTTTGTATTCCATGCCAAAT 59.872 40.000 0.00 0.00 0.00 2.32
3659 3674 3.705072 CCGTCCTGGTTTATTAGTCCTCT 59.295 47.826 0.00 0.00 0.00 3.69
3662 3677 3.450096 ACTCCGTCCTGGTTTATTAGTCC 59.550 47.826 0.00 0.00 39.52 3.85
3680 3695 5.535030 AGAAGTTTTTCCACATGGTAACTCC 59.465 40.000 12.73 4.76 34.20 3.85
3765 3800 7.433131 GTGGAAGTGTATATGATGTGCAATTTG 59.567 37.037 0.00 0.00 0.00 2.32
3855 3890 1.379977 CTCGAGGACCTGCTACCCA 60.380 63.158 3.91 0.00 0.00 4.51
3895 3930 7.976734 AGTCATCTGTCTGCTGTTATAAGTTAC 59.023 37.037 0.00 0.00 0.00 2.50
3959 3994 9.774742 CTAATGATGACATGAATATGCATGAAG 57.225 33.333 27.49 4.43 46.64 3.02
4000 4035 4.934797 ATGGAGGGTCAGAATTTTCAGA 57.065 40.909 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.