Multiple sequence alignment - TraesCS1D01G251000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G251000 chr1D 100.000 6122 0 0 3760 9881 343354338 343348217 0.000000e+00 11306.0
1 TraesCS1D01G251000 chr1D 100.000 1793 0 0 1573 3365 343356525 343354733 0.000000e+00 3312.0
2 TraesCS1D01G251000 chr1D 100.000 1279 0 0 1 1279 343358097 343356819 0.000000e+00 2362.0
3 TraesCS1D01G251000 chr1D 83.921 908 130 15 4985 5886 86096915 86096018 0.000000e+00 854.0
4 TraesCS1D01G251000 chr1D 77.070 157 26 9 1891 2042 270624033 270623882 2.290000e-11 82.4
5 TraesCS1D01G251000 chr1A 95.060 2773 115 17 3761 6521 443131078 443128316 0.000000e+00 4342.0
6 TraesCS1D01G251000 chr1A 92.061 2872 168 26 6980 9817 443126945 443124100 0.000000e+00 3986.0
7 TraesCS1D01G251000 chr1A 97.376 1791 44 3 1576 3365 443132948 443131160 0.000000e+00 3044.0
8 TraesCS1D01G251000 chr1A 90.505 653 22 16 640 1279 443133627 443133002 0.000000e+00 826.0
9 TraesCS1D01G251000 chr1A 95.551 472 9 4 6510 6981 443127565 443127106 0.000000e+00 745.0
10 TraesCS1D01G251000 chr1A 87.715 407 49 1 31 436 443134500 443134094 3.230000e-129 473.0
11 TraesCS1D01G251000 chr1A 83.146 445 73 2 34 477 504583416 504583859 1.200000e-108 405.0
12 TraesCS1D01G251000 chr1B 92.099 2620 134 18 6629 9242 460557154 460554602 0.000000e+00 3624.0
13 TraesCS1D01G251000 chr1B 87.101 690 37 26 634 1279 460558242 460557561 0.000000e+00 734.0
14 TraesCS1D01G251000 chr1B 87.379 515 55 5 31 537 460564029 460563517 5.140000e-162 582.0
15 TraesCS1D01G251000 chr1B 92.887 239 16 1 1579 1816 460557452 460557214 7.350000e-91 346.0
16 TraesCS1D01G251000 chr1B 87.448 239 15 9 9639 9868 460554299 460554067 2.740000e-65 261.0
17 TraesCS1D01G251000 chr1B 91.837 49 4 0 1938 1986 16082193 16082241 1.780000e-07 69.4
18 TraesCS1D01G251000 chr4B 86.957 1104 130 12 4939 6038 629713127 629714220 0.000000e+00 1229.0
19 TraesCS1D01G251000 chr4B 82.875 946 154 6 4939 5882 590047599 590048538 0.000000e+00 843.0
20 TraesCS1D01G251000 chr4B 82.407 972 151 16 4938 5902 108500099 108499141 0.000000e+00 830.0
21 TraesCS1D01G251000 chr4B 75.416 1021 218 29 3763 4764 656990274 656989268 1.940000e-126 464.0
22 TraesCS1D01G251000 chr2B 90.584 754 62 5 4940 5692 532478667 532477922 0.000000e+00 990.0
23 TraesCS1D01G251000 chr2B 94.949 99 2 3 6270 6367 532477787 532477883 1.720000e-32 152.0
24 TraesCS1D01G251000 chr2B 90.435 115 11 0 6520 6634 572791073 572791187 1.720000e-32 152.0
25 TraesCS1D01G251000 chr2B 76.382 199 37 9 1895 2088 523758552 523758359 2.270000e-16 99.0
26 TraesCS1D01G251000 chr3A 83.351 919 142 8 4985 5898 644903097 644902185 0.000000e+00 839.0
27 TraesCS1D01G251000 chr3A 74.705 1016 231 22 3764 4764 746450062 746451066 7.090000e-116 429.0
28 TraesCS1D01G251000 chr3A 74.646 990 224 22 3786 4761 574922668 574923644 7.140000e-111 412.0
29 TraesCS1D01G251000 chr3A 79.302 401 77 6 37 433 717908901 717908503 9.780000e-70 276.0
30 TraesCS1D01G251000 chr3A 92.593 108 8 0 6520 6627 659015399 659015506 1.330000e-33 156.0
31 TraesCS1D01G251000 chr3A 100.000 37 0 0 4905 4941 210248646 210248610 1.780000e-07 69.4
32 TraesCS1D01G251000 chr7A 81.553 1030 161 22 4985 6001 260898346 260897333 0.000000e+00 822.0
33 TraesCS1D01G251000 chr7A 74.723 993 218 28 3786 4761 602991497 602992473 7.140000e-111 412.0
34 TraesCS1D01G251000 chr7A 81.798 445 67 6 34 477 461801803 461802234 2.620000e-95 361.0
35 TraesCS1D01G251000 chr7A 74.227 485 117 7 3764 4244 59762057 59761577 7.830000e-46 196.0
36 TraesCS1D01G251000 chr7A 85.714 77 11 0 1911 1987 127274395 127274471 2.290000e-11 82.4
37 TraesCS1D01G251000 chr4A 81.532 1018 166 17 4985 5989 585703858 585702850 0.000000e+00 819.0
38 TraesCS1D01G251000 chr4A 82.126 828 135 13 4938 5761 456292748 456293566 0.000000e+00 697.0
39 TraesCS1D01G251000 chr4A 80.093 648 109 17 4938 5575 643145721 643146358 1.940000e-126 464.0
40 TraesCS1D01G251000 chr4A 90.991 111 10 0 6520 6630 60654267 60654157 6.180000e-32 150.0
41 TraesCS1D01G251000 chr4A 90.741 108 10 0 6520 6627 477033223 477033330 2.880000e-30 145.0
42 TraesCS1D01G251000 chr4A 86.667 120 15 1 6520 6638 636084870 636084989 2.240000e-26 132.0
43 TraesCS1D01G251000 chr4A 76.371 237 54 2 3787 4022 604944569 604944334 1.040000e-24 126.0
44 TraesCS1D01G251000 chr4A 100.000 37 0 0 4905 4941 34048195 34048159 1.780000e-07 69.4
45 TraesCS1D01G251000 chr3B 84.038 639 93 8 4934 5570 506122314 506122945 3.050000e-169 606.0
46 TraesCS1D01G251000 chr3B 76.489 940 192 26 3837 4760 7157559 7156633 1.490000e-132 484.0
47 TraesCS1D01G251000 chr3B 74.084 1092 254 26 3763 4839 791755006 791756083 1.190000e-113 422.0
48 TraesCS1D01G251000 chr3B 82.247 445 78 1 34 477 677744510 677744954 5.600000e-102 383.0
49 TraesCS1D01G251000 chr3D 83.150 635 81 17 4940 5570 388775957 388776569 3.120000e-154 556.0
50 TraesCS1D01G251000 chr2D 74.773 991 221 24 3786 4761 566770426 566771402 1.530000e-112 418.0
51 TraesCS1D01G251000 chr2D 93.023 43 3 0 4896 4938 506140736 506140778 8.290000e-06 63.9
52 TraesCS1D01G251000 chr6D 81.898 453 68 6 27 477 100195167 100195607 4.360000e-98 370.0
53 TraesCS1D01G251000 chr6D 77.667 403 76 12 37 433 471329118 471328724 5.970000e-57 233.0
54 TraesCS1D01G251000 chr7B 73.014 1045 256 23 3764 4794 556340097 556341129 2.640000e-90 344.0
55 TraesCS1D01G251000 chr7B 73.156 1017 235 32 3767 4762 619404955 619405954 2.060000e-86 331.0
56 TraesCS1D01G251000 chr7B 77.955 440 84 9 34 472 339686529 339686956 7.610000e-66 263.0
57 TraesCS1D01G251000 chr7B 89.815 108 11 0 6520 6627 568677026 568677133 1.340000e-28 139.0
58 TraesCS1D01G251000 chr7B 74.913 287 55 15 1822 2100 610293319 610293042 2.260000e-21 115.0
59 TraesCS1D01G251000 chr7B 76.018 221 45 8 1869 2085 58642285 58642501 3.770000e-19 108.0
60 TraesCS1D01G251000 chr7B 100.000 36 0 0 4906 4941 740050291 740050326 6.400000e-07 67.6
61 TraesCS1D01G251000 chr4D 72.684 1058 259 26 3775 4815 20526548 20525504 9.570000e-85 326.0
62 TraesCS1D01G251000 chr4D 97.368 38 1 0 4906 4943 28982220 28982183 2.300000e-06 65.8
63 TraesCS1D01G251000 chr5D 72.790 1018 252 25 3763 4766 543878899 543879905 1.240000e-83 322.0
64 TraesCS1D01G251000 chr5D 92.593 108 8 0 6520 6627 412263343 412263450 1.330000e-33 156.0
65 TraesCS1D01G251000 chr5D 100.000 36 0 0 4906 4941 412263324 412263359 6.400000e-07 67.6
66 TraesCS1D01G251000 chr5A 72.709 1015 234 34 3764 4763 688272995 688273981 5.800000e-77 300.0
67 TraesCS1D01G251000 chr5A 74.262 237 45 11 1822 2050 332728007 332727779 1.770000e-12 86.1
68 TraesCS1D01G251000 chr5A 73.750 240 46 11 1819 2050 431664563 431664793 2.960000e-10 78.7
69 TraesCS1D01G251000 chr5A 100.000 36 0 0 4906 4941 524028387 524028422 6.400000e-07 67.6
70 TraesCS1D01G251000 chr2A 89.565 115 12 0 6520 6634 632952320 632952434 8.000000e-31 147.0
71 TraesCS1D01G251000 chr2A 100.000 35 0 0 4907 4941 16863144 16863178 2.300000e-06 65.8
72 TraesCS1D01G251000 chr6B 72.877 365 78 17 4440 4792 75060137 75059782 1.360000e-18 106.0
73 TraesCS1D01G251000 chr7D 80.916 131 24 1 1869 1998 101512552 101512682 1.760000e-17 102.0
74 TraesCS1D01G251000 chr7D 100.000 37 0 0 4905 4941 199022952 199022988 1.780000e-07 69.4
75 TraesCS1D01G251000 chr5B 84.146 82 10 3 9801 9881 596633161 596633082 1.060000e-09 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G251000 chr1D 343348217 343358097 9880 True 5660.00 11306 100.000000 1 9881 3 chr1D.!!$R3 9880
1 TraesCS1D01G251000 chr1D 86096018 86096915 897 True 854.00 854 83.921000 4985 5886 1 chr1D.!!$R1 901
2 TraesCS1D01G251000 chr1A 443124100 443134500 10400 True 2236.00 4342 93.044667 31 9817 6 chr1A.!!$R1 9786
3 TraesCS1D01G251000 chr1B 460554067 460558242 4175 True 1241.25 3624 89.883750 634 9868 4 chr1B.!!$R2 9234
4 TraesCS1D01G251000 chr1B 460563517 460564029 512 True 582.00 582 87.379000 31 537 1 chr1B.!!$R1 506
5 TraesCS1D01G251000 chr4B 629713127 629714220 1093 False 1229.00 1229 86.957000 4939 6038 1 chr4B.!!$F2 1099
6 TraesCS1D01G251000 chr4B 590047599 590048538 939 False 843.00 843 82.875000 4939 5882 1 chr4B.!!$F1 943
7 TraesCS1D01G251000 chr4B 108499141 108500099 958 True 830.00 830 82.407000 4938 5902 1 chr4B.!!$R1 964
8 TraesCS1D01G251000 chr4B 656989268 656990274 1006 True 464.00 464 75.416000 3763 4764 1 chr4B.!!$R2 1001
9 TraesCS1D01G251000 chr2B 532477922 532478667 745 True 990.00 990 90.584000 4940 5692 1 chr2B.!!$R2 752
10 TraesCS1D01G251000 chr3A 644902185 644903097 912 True 839.00 839 83.351000 4985 5898 1 chr3A.!!$R2 913
11 TraesCS1D01G251000 chr3A 746450062 746451066 1004 False 429.00 429 74.705000 3764 4764 1 chr3A.!!$F3 1000
12 TraesCS1D01G251000 chr3A 574922668 574923644 976 False 412.00 412 74.646000 3786 4761 1 chr3A.!!$F1 975
13 TraesCS1D01G251000 chr7A 260897333 260898346 1013 True 822.00 822 81.553000 4985 6001 1 chr7A.!!$R2 1016
14 TraesCS1D01G251000 chr7A 602991497 602992473 976 False 412.00 412 74.723000 3786 4761 1 chr7A.!!$F3 975
15 TraesCS1D01G251000 chr4A 585702850 585703858 1008 True 819.00 819 81.532000 4985 5989 1 chr4A.!!$R3 1004
16 TraesCS1D01G251000 chr4A 456292748 456293566 818 False 697.00 697 82.126000 4938 5761 1 chr4A.!!$F1 823
17 TraesCS1D01G251000 chr4A 643145721 643146358 637 False 464.00 464 80.093000 4938 5575 1 chr4A.!!$F4 637
18 TraesCS1D01G251000 chr3B 506122314 506122945 631 False 606.00 606 84.038000 4934 5570 1 chr3B.!!$F1 636
19 TraesCS1D01G251000 chr3B 7156633 7157559 926 True 484.00 484 76.489000 3837 4760 1 chr3B.!!$R1 923
20 TraesCS1D01G251000 chr3B 791755006 791756083 1077 False 422.00 422 74.084000 3763 4839 1 chr3B.!!$F3 1076
21 TraesCS1D01G251000 chr3D 388775957 388776569 612 False 556.00 556 83.150000 4940 5570 1 chr3D.!!$F1 630
22 TraesCS1D01G251000 chr2D 566770426 566771402 976 False 418.00 418 74.773000 3786 4761 1 chr2D.!!$F2 975
23 TraesCS1D01G251000 chr7B 556340097 556341129 1032 False 344.00 344 73.014000 3764 4794 1 chr7B.!!$F3 1030
24 TraesCS1D01G251000 chr7B 619404955 619405954 999 False 331.00 331 73.156000 3767 4762 1 chr7B.!!$F5 995
25 TraesCS1D01G251000 chr4D 20525504 20526548 1044 True 326.00 326 72.684000 3775 4815 1 chr4D.!!$R1 1040
26 TraesCS1D01G251000 chr5D 543878899 543879905 1006 False 322.00 322 72.790000 3763 4766 1 chr5D.!!$F1 1003
27 TraesCS1D01G251000 chr5A 688272995 688273981 986 False 300.00 300 72.709000 3764 4763 1 chr5A.!!$F3 999

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
194 195 0.036022 ACCTCAGCAGCTTTGACTCC 59.964 55.000 0.00 0.00 0.00 3.85 F
657 922 0.040058 TCAAGTGGCATGCTCCCAAT 59.960 50.000 18.92 3.36 33.39 3.16 F
1273 1585 0.106519 CCTGTATGGGGGAAAGCCTG 60.107 60.000 0.00 0.00 0.00 4.85 F
2823 3136 0.036306 TCCAGTTTTTCGCTCCTCCC 59.964 55.000 0.00 0.00 0.00 4.30 F
3360 3673 1.233019 CACCAAGCTTGTCTGGACAG 58.767 55.000 24.35 9.35 42.94 3.51 F
4964 5289 0.255033 GAAATGCGGTCCCTTAGGGT 59.745 55.000 18.01 0.00 44.74 4.34 F
5386 5718 0.740868 CATGGAGTCATCGTTGCCGT 60.741 55.000 0.00 0.00 35.01 5.68 F
6288 6650 1.001020 TGAATCCACAAGGCGCCAT 60.001 52.632 31.54 15.82 33.74 4.40 F
6627 7758 0.912486 AATTCGGGAAGGAGGGAGTG 59.088 55.000 0.00 0.00 0.00 3.51 F
8201 9497 0.316772 CTAGATACCGGACGTGTGCG 60.317 60.000 9.46 6.95 44.17 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1881 2194 1.910580 GCCACCCGGGAGATCTCAAA 61.911 60.000 32.02 0.00 40.01 2.69 R
2645 2958 0.528470 GGACAGCTGACGCTACTCTT 59.472 55.000 23.35 0.00 46.99 2.85 R
2902 3215 0.238553 GGGCGTTTTTCAGTGAGCTC 59.761 55.000 6.82 6.82 0.00 4.09 R
3770 4083 1.783979 TGGGGAGTAAGCAGGGAAAAA 59.216 47.619 0.00 0.00 0.00 1.94 R
5325 5656 0.603707 CTCTTTGGAGGTTGCGCTGA 60.604 55.000 9.73 0.00 36.03 4.26 R
6395 6764 0.173708 CTACCTCTCCTCACCGTTGC 59.826 60.000 0.00 0.00 0.00 4.17 R
6397 6766 0.324460 CCCTACCTCTCCTCACCGTT 60.324 60.000 0.00 0.00 0.00 4.44 R
7488 8782 0.530744 TCGAATCTCTGACCCAACGG 59.469 55.000 0.00 0.00 0.00 4.44 R
8470 9767 1.404047 GGTTGGACCATTGGAAATGCG 60.404 52.381 10.37 0.00 38.42 4.73 R
9811 11143 1.986882 AAGTGCTTCAACCCCTCAAG 58.013 50.000 0.00 0.00 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.927004 TGACAACCACGAAGCCATC 58.073 52.632 0.00 0.00 0.00 3.51
19 20 0.107643 TGACAACCACGAAGCCATCA 59.892 50.000 0.00 0.00 0.00 3.07
20 21 0.517316 GACAACCACGAAGCCATCAC 59.483 55.000 0.00 0.00 0.00 3.06
21 22 1.227999 ACAACCACGAAGCCATCACG 61.228 55.000 0.00 0.00 0.00 4.35
22 23 2.325082 AACCACGAAGCCATCACGC 61.325 57.895 0.00 0.00 0.00 5.34
23 24 3.853330 CCACGAAGCCATCACGCG 61.853 66.667 3.53 3.53 0.00 6.01
24 25 4.505217 CACGAAGCCATCACGCGC 62.505 66.667 5.73 0.00 0.00 6.86
26 27 4.214383 CGAAGCCATCACGCGCAG 62.214 66.667 5.73 2.42 0.00 5.18
27 28 3.869272 GAAGCCATCACGCGCAGG 61.869 66.667 5.73 3.88 0.00 4.85
35 36 4.332637 CACGCGCAGGCAAAAGCT 62.333 61.111 5.73 0.00 39.92 3.74
53 54 0.233848 CTAAACCGTCAACCACACGC 59.766 55.000 0.00 0.00 35.87 5.34
78 79 0.898326 TGACCAAGCAGCTCCGACTA 60.898 55.000 0.00 0.00 0.00 2.59
82 83 1.284657 CAAGCAGCTCCGACTATGTG 58.715 55.000 0.00 0.00 0.00 3.21
113 114 2.306847 GCAGGAGAAAAAGTGTTGGGA 58.693 47.619 0.00 0.00 0.00 4.37
114 115 2.893489 GCAGGAGAAAAAGTGTTGGGAT 59.107 45.455 0.00 0.00 0.00 3.85
138 139 2.670934 AAGCCAGCGCCAGAACTG 60.671 61.111 2.29 0.00 34.57 3.16
142 143 3.114616 CAGCGCCAGAACTGACCG 61.115 66.667 2.29 6.88 35.90 4.79
145 146 4.379243 CGCCAGAACTGACCGCCT 62.379 66.667 3.19 0.00 0.00 5.52
149 150 2.925170 AGAACTGACCGCCTGCCT 60.925 61.111 0.00 0.00 0.00 4.75
151 152 4.379243 AACTGACCGCCTGCCTCG 62.379 66.667 0.00 0.00 0.00 4.63
159 160 4.819761 GCCTGCCTCGCGTCATCA 62.820 66.667 5.77 0.00 0.00 3.07
163 164 3.032609 GCCTCGCGTCATCATCGG 61.033 66.667 5.77 0.00 0.00 4.18
187 188 4.357279 GGCCCACCTCAGCAGCTT 62.357 66.667 0.00 0.00 0.00 3.74
188 189 2.282745 GCCCACCTCAGCAGCTTT 60.283 61.111 0.00 0.00 0.00 3.51
194 195 0.036022 ACCTCAGCAGCTTTGACTCC 59.964 55.000 0.00 0.00 0.00 3.85
196 197 1.544093 CCTCAGCAGCTTTGACTCCAA 60.544 52.381 0.00 0.00 0.00 3.53
210 211 4.594970 TGACTCCAAAAAGACCAAGTGAA 58.405 39.130 0.00 0.00 0.00 3.18
227 228 2.430382 GAAGCACGACAACCCCTCGA 62.430 60.000 0.00 0.00 35.08 4.04
230 231 1.068417 CACGACAACCCCTCGAACA 59.932 57.895 0.00 0.00 35.08 3.18
232 233 2.019951 CGACAACCCCTCGAACACG 61.020 63.158 0.00 0.00 32.65 4.49
258 259 3.604875 TGAGACCGACTACCAAAATCC 57.395 47.619 0.00 0.00 0.00 3.01
261 262 3.170717 AGACCGACTACCAAAATCCAGA 58.829 45.455 0.00 0.00 0.00 3.86
267 268 4.437390 CGACTACCAAAATCCAGATGCAAC 60.437 45.833 0.00 0.00 0.00 4.17
270 271 1.901159 CCAAAATCCAGATGCAACCCA 59.099 47.619 0.00 0.00 0.00 4.51
277 278 1.675641 AGATGCAACCCAACTCCGC 60.676 57.895 0.00 0.00 0.00 5.54
278 279 3.039202 GATGCAACCCAACTCCGCG 62.039 63.158 0.00 0.00 0.00 6.46
301 302 2.562912 CTGCCATCGTTGCCACAC 59.437 61.111 0.00 0.00 0.00 3.82
310 311 0.042188 CGTTGCCACACAAGAAGTCG 60.042 55.000 0.00 0.00 39.50 4.18
344 346 2.434884 CGCCAACCGAGCATCTGT 60.435 61.111 0.00 0.00 40.02 3.41
350 352 0.248661 AACCGAGCATCTGTCGATCG 60.249 55.000 9.36 9.36 39.92 3.69
352 354 2.353074 CGAGCATCTGTCGATCGCG 61.353 63.158 11.09 0.00 39.92 5.87
364 366 1.200103 GATCGCGATGTCATGCACG 59.800 57.895 29.09 0.00 0.00 5.34
367 369 1.296145 CGCGATGTCATGCACGTTC 60.296 57.895 0.00 0.00 0.00 3.95
375 377 0.671472 TCATGCACGTTCAGCTCCAG 60.671 55.000 0.00 0.00 0.00 3.86
379 381 0.884704 GCACGTTCAGCTCCAGGAAA 60.885 55.000 0.00 0.00 0.00 3.13
412 414 0.443869 CAATGACCTTGAAGGCGACG 59.556 55.000 11.96 0.00 39.63 5.12
440 442 3.766691 GGTAGCGGCGTGGGAGAA 61.767 66.667 9.37 0.00 0.00 2.87
441 443 2.499685 GTAGCGGCGTGGGAGAAT 59.500 61.111 9.37 0.00 0.00 2.40
442 444 1.883084 GTAGCGGCGTGGGAGAATG 60.883 63.158 9.37 0.00 0.00 2.67
443 445 2.055633 TAGCGGCGTGGGAGAATGA 61.056 57.895 9.37 0.00 0.00 2.57
444 446 2.292794 TAGCGGCGTGGGAGAATGAC 62.293 60.000 9.37 0.00 0.00 3.06
445 447 2.885644 CGGCGTGGGAGAATGACG 60.886 66.667 0.00 0.00 36.18 4.35
448 450 2.264480 CGTGGGAGAATGACGCCA 59.736 61.111 0.00 0.00 40.26 5.69
449 451 1.153369 CGTGGGAGAATGACGCCAT 60.153 57.895 0.00 0.00 40.26 4.40
450 452 1.154205 CGTGGGAGAATGACGCCATC 61.154 60.000 0.00 0.00 40.26 3.51
451 453 1.143838 TGGGAGAATGACGCCATCG 59.856 57.895 0.00 0.00 40.26 3.84
452 454 2.247437 GGGAGAATGACGCCATCGC 61.247 63.158 0.00 0.00 40.26 4.58
453 455 2.247437 GGAGAATGACGCCATCGCC 61.247 63.158 0.00 0.00 39.84 5.54
454 456 1.227380 GAGAATGACGCCATCGCCT 60.227 57.895 0.00 0.00 39.84 5.52
455 457 1.493950 GAGAATGACGCCATCGCCTG 61.494 60.000 0.00 0.00 39.84 4.85
456 458 1.521457 GAATGACGCCATCGCCTGA 60.521 57.895 0.00 0.00 39.84 3.86
457 459 1.766143 GAATGACGCCATCGCCTGAC 61.766 60.000 0.00 0.00 39.84 3.51
459 461 2.583593 GACGCCATCGCCTGACTC 60.584 66.667 0.00 0.00 39.84 3.36
460 462 3.356639 GACGCCATCGCCTGACTCA 62.357 63.158 0.00 0.00 39.84 3.41
461 463 2.887568 CGCCATCGCCTGACTCAC 60.888 66.667 0.00 0.00 0.00 3.51
463 465 1.375908 GCCATCGCCTGACTCACAA 60.376 57.895 0.00 0.00 0.00 3.33
464 466 1.639298 GCCATCGCCTGACTCACAAC 61.639 60.000 0.00 0.00 0.00 3.32
466 468 1.079819 ATCGCCTGACTCACAACGG 60.080 57.895 0.00 0.00 0.00 4.44
467 469 1.532604 ATCGCCTGACTCACAACGGA 61.533 55.000 0.00 0.00 0.00 4.69
468 470 1.734477 CGCCTGACTCACAACGGAG 60.734 63.158 0.00 0.00 40.79 4.63
475 477 0.962489 ACTCACAACGGAGTCTGAGG 59.038 55.000 5.81 0.00 44.63 3.86
476 478 0.389166 CTCACAACGGAGTCTGAGGC 60.389 60.000 5.81 0.00 45.00 4.70
478 480 2.125912 CAACGGAGTCTGAGGCCG 60.126 66.667 5.81 14.41 45.00 6.13
490 492 1.296715 GAGGCCGACTCACACCATT 59.703 57.895 0.00 0.00 45.85 3.16
491 493 1.003355 AGGCCGACTCACACCATTG 60.003 57.895 0.00 0.00 0.00 2.82
493 495 0.392998 GGCCGACTCACACCATTGAT 60.393 55.000 0.00 0.00 0.00 2.57
495 497 1.131126 GCCGACTCACACCATTGATTG 59.869 52.381 0.00 0.00 0.00 2.67
510 512 7.838079 CCATTGATTGGGATTTAATGGTCTA 57.162 36.000 0.00 0.00 41.64 2.59
511 513 7.661040 CCATTGATTGGGATTTAATGGTCTAC 58.339 38.462 0.00 0.00 41.64 2.59
512 514 7.287466 CCATTGATTGGGATTTAATGGTCTACA 59.713 37.037 0.00 0.00 41.64 2.74
513 515 8.694540 CATTGATTGGGATTTAATGGTCTACAA 58.305 33.333 0.00 0.00 0.00 2.41
514 516 7.880160 TGATTGGGATTTAATGGTCTACAAG 57.120 36.000 0.00 0.00 0.00 3.16
516 518 7.893302 TGATTGGGATTTAATGGTCTACAAGTT 59.107 33.333 0.00 0.00 0.00 2.66
518 520 8.570068 TTGGGATTTAATGGTCTACAAGTTAC 57.430 34.615 0.00 0.00 0.00 2.50
520 522 6.238293 GGGATTTAATGGTCTACAAGTTACGC 60.238 42.308 0.00 0.00 0.00 4.42
521 523 5.766702 TTTAATGGTCTACAAGTTACGCG 57.233 39.130 3.53 3.53 0.00 6.01
522 524 1.636988 ATGGTCTACAAGTTACGCGC 58.363 50.000 5.73 0.00 0.00 6.86
523 525 0.314618 TGGTCTACAAGTTACGCGCA 59.685 50.000 5.73 0.00 0.00 6.09
524 526 1.269673 TGGTCTACAAGTTACGCGCAA 60.270 47.619 5.73 0.00 0.00 4.85
525 527 1.997606 GGTCTACAAGTTACGCGCAAT 59.002 47.619 5.73 0.00 0.00 3.56
526 528 3.181397 GGTCTACAAGTTACGCGCAATA 58.819 45.455 5.73 0.00 0.00 1.90
527 529 3.242248 GGTCTACAAGTTACGCGCAATAG 59.758 47.826 5.73 0.00 0.00 1.73
529 531 4.325472 GTCTACAAGTTACGCGCAATAGTT 59.675 41.667 5.73 0.00 0.00 2.24
530 532 4.925054 TCTACAAGTTACGCGCAATAGTTT 59.075 37.500 5.73 0.00 0.00 2.66
532 534 5.594724 ACAAGTTACGCGCAATAGTTTTA 57.405 34.783 5.73 0.00 0.00 1.52
533 535 5.376537 ACAAGTTACGCGCAATAGTTTTAC 58.623 37.500 5.73 0.00 0.00 2.01
535 537 5.789710 AGTTACGCGCAATAGTTTTACAT 57.210 34.783 5.73 0.00 0.00 2.29
536 538 5.556470 AGTTACGCGCAATAGTTTTACATG 58.444 37.500 5.73 0.00 0.00 3.21
537 539 5.121142 AGTTACGCGCAATAGTTTTACATGT 59.879 36.000 5.73 2.69 0.00 3.21
538 540 3.998522 ACGCGCAATAGTTTTACATGTC 58.001 40.909 5.73 0.00 0.00 3.06
539 541 3.433957 ACGCGCAATAGTTTTACATGTCA 59.566 39.130 5.73 0.00 0.00 3.58
543 545 4.781026 CGCAATAGTTTTACATGTCACGTG 59.219 41.667 9.94 9.94 0.00 4.49
544 546 5.613795 CGCAATAGTTTTACATGTCACGTGT 60.614 40.000 16.51 8.00 0.00 4.49
546 548 6.735063 GCAATAGTTTTACATGTCACGTGTAC 59.265 38.462 16.51 12.72 32.18 2.90
548 550 5.646467 AGTTTTACATGTCACGTGTACAC 57.354 39.130 16.32 16.32 32.18 2.90
549 551 5.110598 AGTTTTACATGTCACGTGTACACA 58.889 37.500 24.98 13.19 32.18 3.72
551 553 5.644902 TTTACATGTCACGTGTACACAAG 57.355 39.130 24.98 16.16 32.18 3.16
553 555 1.798223 CATGTCACGTGTACACAAGGG 59.202 52.381 24.98 11.48 0.00 3.95
554 556 0.531090 TGTCACGTGTACACAAGGGC 60.531 55.000 24.98 15.02 0.00 5.19
555 557 1.300311 TCACGTGTACACAAGGGCG 60.300 57.895 24.98 12.71 0.00 6.13
556 558 2.029964 ACGTGTACACAAGGGCGG 59.970 61.111 24.98 9.71 0.00 6.13
559 561 1.082117 CGTGTACACAAGGGCGGATC 61.082 60.000 24.98 0.00 0.00 3.36
560 562 0.743345 GTGTACACAAGGGCGGATCC 60.743 60.000 21.14 0.00 0.00 3.36
561 563 1.195442 TGTACACAAGGGCGGATCCA 61.195 55.000 13.41 0.00 36.21 3.41
562 564 0.462047 GTACACAAGGGCGGATCCAG 60.462 60.000 13.41 5.88 36.21 3.86
563 565 0.616395 TACACAAGGGCGGATCCAGA 60.616 55.000 13.41 0.00 36.21 3.86
564 566 1.153289 CACAAGGGCGGATCCAGAG 60.153 63.158 13.41 0.00 36.21 3.35
565 567 1.306141 ACAAGGGCGGATCCAGAGA 60.306 57.895 13.41 0.00 36.21 3.10
566 568 1.333636 ACAAGGGCGGATCCAGAGAG 61.334 60.000 13.41 0.00 36.21 3.20
567 569 1.045350 CAAGGGCGGATCCAGAGAGA 61.045 60.000 13.41 0.00 36.21 3.10
568 570 0.325671 AAGGGCGGATCCAGAGAGAA 60.326 55.000 13.41 0.00 36.21 2.87
570 572 0.761802 GGGCGGATCCAGAGAGAAAT 59.238 55.000 13.41 0.00 36.21 2.17
571 573 1.542108 GGGCGGATCCAGAGAGAAATG 60.542 57.143 13.41 0.00 36.21 2.32
572 574 1.542108 GGCGGATCCAGAGAGAAATGG 60.542 57.143 13.41 0.00 37.97 3.16
578 580 3.920231 TCCAGAGAGAAATGGATGTGG 57.080 47.619 0.00 0.00 40.70 4.17
580 582 3.054875 TCCAGAGAGAAATGGATGTGGTG 60.055 47.826 0.00 0.00 40.70 4.17
582 584 2.019984 GAGAGAAATGGATGTGGTGCC 58.980 52.381 0.00 0.00 0.00 5.01
583 585 1.106285 GAGAAATGGATGTGGTGCCC 58.894 55.000 0.00 0.00 0.00 5.36
584 586 0.706433 AGAAATGGATGTGGTGCCCT 59.294 50.000 0.00 0.00 0.00 5.19
588 590 1.521764 ATGGATGTGGTGCCCTATCA 58.478 50.000 0.00 0.00 0.00 2.15
590 592 2.700354 TGGATGTGGTGCCCTATCATA 58.300 47.619 0.00 0.00 0.00 2.15
591 593 3.259328 TGGATGTGGTGCCCTATCATAT 58.741 45.455 0.00 0.00 0.00 1.78
594 596 5.492162 TGGATGTGGTGCCCTATCATATAAT 59.508 40.000 0.00 0.00 0.00 1.28
595 597 6.058183 GGATGTGGTGCCCTATCATATAATC 58.942 44.000 0.00 0.00 0.00 1.75
596 598 6.352996 GGATGTGGTGCCCTATCATATAATCA 60.353 42.308 0.00 0.00 0.00 2.57
597 599 5.804639 TGTGGTGCCCTATCATATAATCAC 58.195 41.667 0.00 0.00 0.00 3.06
598 600 5.309282 TGTGGTGCCCTATCATATAATCACA 59.691 40.000 0.00 0.00 0.00 3.58
599 601 5.643777 GTGGTGCCCTATCATATAATCACAC 59.356 44.000 0.00 0.00 0.00 3.82
600 602 5.309282 TGGTGCCCTATCATATAATCACACA 59.691 40.000 0.00 0.00 0.00 3.72
601 603 6.012596 TGGTGCCCTATCATATAATCACACAT 60.013 38.462 0.00 0.00 0.00 3.21
602 604 7.181845 TGGTGCCCTATCATATAATCACACATA 59.818 37.037 0.00 0.00 0.00 2.29
603 605 8.213679 GGTGCCCTATCATATAATCACACATAT 58.786 37.037 0.00 0.00 0.00 1.78
604 606 9.618890 GTGCCCTATCATATAATCACACATATT 57.381 33.333 0.00 0.00 0.00 1.28
631 633 7.800155 TTTTGTCTAATGATGAAGTGTCACA 57.200 32.000 5.62 0.00 36.31 3.58
632 634 7.984422 TTTGTCTAATGATGAAGTGTCACAT 57.016 32.000 5.62 0.00 36.31 3.21
638 903 3.860641 TGATGAAGTGTCACATACGCAT 58.139 40.909 5.62 1.25 41.29 4.73
657 922 0.040058 TCAAGTGGCATGCTCCCAAT 59.960 50.000 18.92 3.36 33.39 3.16
663 928 1.669999 GGCATGCTCCCAATCCACAC 61.670 60.000 18.92 0.00 0.00 3.82
866 1163 5.047306 CCCACATAAGTACTCTCTCACACAA 60.047 44.000 0.00 0.00 0.00 3.33
952 1249 3.896888 AGTTGCCTCATCTCCTCTCTATG 59.103 47.826 0.00 0.00 0.00 2.23
960 1268 2.293170 TCTCCTCTCTATGACACAGCG 58.707 52.381 0.00 0.00 0.00 5.18
984 1292 2.515057 GGTGTGGGTGTGACGCAA 60.515 61.111 0.00 0.00 42.80 4.85
1273 1585 0.106519 CCTGTATGGGGGAAAGCCTG 60.107 60.000 0.00 0.00 0.00 4.85
1620 1932 0.107361 CCACCGGTAGATTTGGGGAC 60.107 60.000 6.87 0.00 0.00 4.46
1627 1939 3.181474 CGGTAGATTTGGGGACTTCTCTC 60.181 52.174 0.00 0.00 0.00 3.20
1672 1985 9.804547 GACGAAATTAGATGCTTCTGAATATTC 57.195 33.333 12.19 8.60 33.17 1.75
1772 2085 0.400213 TGGAAGCTTGACCGGAATGT 59.600 50.000 9.46 0.00 0.00 2.71
1881 2194 5.255397 TCAGGATGTTTCCAGGTACAAAT 57.745 39.130 0.00 0.00 45.30 2.32
1906 2219 2.833151 ATCTCCCGGGTGGCCTAACA 62.833 60.000 22.86 0.00 0.00 2.41
1914 2227 0.532115 GGTGGCCTAACAAAGCATGG 59.468 55.000 3.32 0.00 0.00 3.66
1915 2228 1.256812 GTGGCCTAACAAAGCATGGT 58.743 50.000 3.32 0.00 0.00 3.55
1969 2282 2.554032 AGGTTGTGAGCCTTGAAATTCG 59.446 45.455 0.00 0.00 31.04 3.34
2033 2346 9.451002 AGAAGATGATCTGCCTATTATTTCATG 57.549 33.333 0.00 0.00 0.00 3.07
2179 2492 0.167470 CAATGCCTCAAGTGTCGCTG 59.833 55.000 0.00 0.00 0.00 5.18
2275 2588 2.574018 GCACCAAAACCTCCTGCCC 61.574 63.158 0.00 0.00 0.00 5.36
2285 2598 0.107459 CCTCCTGCCCTAGAAACAGC 60.107 60.000 0.00 0.00 0.00 4.40
2306 2619 2.424601 CGGCATCCACATTGAACTTCAT 59.575 45.455 0.00 0.00 0.00 2.57
2381 2694 0.250295 TCCTTCGCTGGTTTGGACAG 60.250 55.000 0.00 0.00 38.95 3.51
2397 2710 6.813293 TTGGACAGGATCTGAATATCTGAA 57.187 37.500 1.59 0.00 35.18 3.02
2443 2756 7.124573 TGAGTAGATAGCAGGCTTTGATAAA 57.875 36.000 0.00 0.00 30.29 1.40
2551 2864 3.741249 TCATGCATTGCAAACAACCAAT 58.259 36.364 16.46 0.00 43.62 3.16
2643 2956 3.470709 TCTAGCCATATTGCAACTCAGC 58.529 45.455 0.00 2.98 0.00 4.26
2753 3066 3.411351 CGAGTGCCGGACCAAACG 61.411 66.667 5.05 0.01 33.91 3.60
2823 3136 0.036306 TCCAGTTTTTCGCTCCTCCC 59.964 55.000 0.00 0.00 0.00 4.30
2884 3197 1.536766 CTCTGCTGCATTTTGTTCGGA 59.463 47.619 1.31 0.00 0.00 4.55
2902 3215 3.378959 GGACAATAAGTTTGTACGCCG 57.621 47.619 0.00 0.00 31.96 6.46
2938 3251 2.279784 CCTTCCGATCAGCGCTCC 60.280 66.667 7.13 0.00 39.11 4.70
2959 3272 3.199946 CCTAGCCCAAAAGTCATCTACCA 59.800 47.826 0.00 0.00 0.00 3.25
3073 3386 2.172293 AGAGGTTGGATCAATCAGCTCC 59.828 50.000 0.00 0.00 33.01 4.70
3161 3474 5.108517 CCCAATTGTGTTTCCAAATATCGG 58.891 41.667 4.43 0.00 0.00 4.18
3186 3499 8.019656 GTAGTTTTACCATCTCCTATCCTTCA 57.980 38.462 0.00 0.00 0.00 3.02
3352 3665 1.755959 TGCATCAAACACCAAGCTTGT 59.244 42.857 24.35 10.37 0.00 3.16
3360 3673 1.233019 CACCAAGCTTGTCTGGACAG 58.767 55.000 24.35 9.35 42.94 3.51
3802 4116 0.399949 ACTCCCCACCAGAACTGTCA 60.400 55.000 1.18 0.00 0.00 3.58
3873 4187 2.972713 GCCATGGAATAGACTAGGACCA 59.027 50.000 18.40 7.28 0.00 4.02
3948 4262 2.025321 TCCATCCAGCCTTTTACCTTCC 60.025 50.000 0.00 0.00 0.00 3.46
3970 4285 3.181497 CCCCAAACTCTATCACGCAAATG 60.181 47.826 0.00 0.00 0.00 2.32
4348 4665 2.352960 CCGCAGTCAAGAAAAGATAGGC 59.647 50.000 0.00 0.00 0.00 3.93
4816 5139 6.198650 TCAGCACAAGAACCATATCATTTG 57.801 37.500 0.00 0.00 0.00 2.32
4964 5289 0.255033 GAAATGCGGTCCCTTAGGGT 59.745 55.000 18.01 0.00 44.74 4.34
5206 5534 3.164268 CCAAGACCCCATTGAATGAACA 58.836 45.455 6.76 0.00 0.00 3.18
5249 5578 2.049618 GCCAAACAATCGGCGCAA 60.050 55.556 10.83 0.00 38.82 4.85
5325 5656 2.851071 GCCTCGCATCGACCTAGCT 61.851 63.158 0.00 0.00 0.00 3.32
5386 5718 0.740868 CATGGAGTCATCGTTGCCGT 60.741 55.000 0.00 0.00 35.01 5.68
6022 6384 3.898509 GCCACAACACCGCAGCAA 61.899 61.111 0.00 0.00 0.00 3.91
6024 6386 2.352229 CACAACACCGCAGCAACG 60.352 61.111 0.00 0.00 0.00 4.10
6066 6428 2.650116 GCACTCGCAGGAAGGAGGA 61.650 63.158 0.00 0.00 38.36 3.71
6101 6463 2.266055 CACACCGGGAAGGAGCTC 59.734 66.667 6.32 4.71 45.00 4.09
6103 6465 1.841556 ACACCGGGAAGGAGCTCAA 60.842 57.895 17.19 0.00 45.00 3.02
6173 6535 2.368878 GGCAGGAAGGGGAGGGAT 60.369 66.667 0.00 0.00 0.00 3.85
6174 6536 2.761465 GGCAGGAAGGGGAGGGATG 61.761 68.421 0.00 0.00 0.00 3.51
6229 6591 2.737830 GCAGCCTAGGATCCCGAC 59.262 66.667 14.75 0.00 0.00 4.79
6245 6607 2.126071 ACGACGAAGACATGGCGG 60.126 61.111 0.00 0.00 0.00 6.13
6263 6625 4.473520 CTGCCACCCGCCGAAGAT 62.474 66.667 0.00 0.00 36.24 2.40
6275 6637 1.784525 CCGAAGATACGGCCTGAATC 58.215 55.000 0.00 0.55 46.20 2.52
6279 6641 1.496060 AGATACGGCCTGAATCCACA 58.504 50.000 0.00 0.00 0.00 4.17
6288 6650 1.001020 TGAATCCACAAGGCGCCAT 60.001 52.632 31.54 15.82 33.74 4.40
6326 6689 3.465403 CGAGCCTCCCTCCACCAG 61.465 72.222 0.00 0.00 37.27 4.00
6327 6690 3.086600 GAGCCTCCCTCCACCAGG 61.087 72.222 0.00 0.00 43.01 4.45
6617 7748 8.852135 ACAAATCTAAAACAACTAATTCGGGAA 58.148 29.630 0.00 0.00 0.00 3.97
6619 7750 7.625828 ATCTAAAACAACTAATTCGGGAAGG 57.374 36.000 0.00 0.00 0.00 3.46
6624 7755 2.504175 CAACTAATTCGGGAAGGAGGGA 59.496 50.000 0.00 0.00 0.00 4.20
6625 7756 2.399580 ACTAATTCGGGAAGGAGGGAG 58.600 52.381 0.00 0.00 0.00 4.30
6626 7757 2.292984 ACTAATTCGGGAAGGAGGGAGT 60.293 50.000 0.00 0.00 0.00 3.85
6627 7758 0.912486 AATTCGGGAAGGAGGGAGTG 59.088 55.000 0.00 0.00 0.00 3.51
6748 7879 8.622948 AGCTAACACTACTATCTTTTGCTTTT 57.377 30.769 0.00 0.00 0.00 2.27
6909 8040 9.883142 TCAATTTTGTTCAATTAGTTTTGGACT 57.117 25.926 0.00 0.00 42.55 3.85
6928 8059 8.779096 TTGGACTTTTGGGTAATTAGGTTAAA 57.221 30.769 0.00 0.00 0.00 1.52
7060 8353 7.041030 TCGTTAGGAATAAATGCAGTGTTTTGA 60.041 33.333 0.00 0.00 0.00 2.69
7061 8354 7.271223 CGTTAGGAATAAATGCAGTGTTTTGAG 59.729 37.037 0.00 0.00 0.00 3.02
7107 8400 7.038799 ACCCTGCAAAGTTTTGAGATAAATGAT 60.039 33.333 8.70 0.00 40.55 2.45
7153 8446 1.079503 CTGCGAGAAACTTGGTAGGC 58.920 55.000 0.00 0.00 0.00 3.93
7164 8457 6.659668 AGAAACTTGGTAGGCTTAATCCTTTC 59.340 38.462 2.61 0.00 37.66 2.62
7193 8486 1.000171 GCAGCTTTAAGGCTTGCAACT 60.000 47.619 20.81 0.00 41.00 3.16
7289 8582 8.510243 AAGTTTTGCAAGGAAAGAAAATGAAT 57.490 26.923 0.00 0.00 0.00 2.57
7341 8634 6.647895 CCCGTAGTTGTATTCACTTTAACACT 59.352 38.462 0.00 0.00 0.00 3.55
7525 8819 4.210724 TCGAGGAATAATGGTTTCCGTT 57.789 40.909 0.00 0.00 45.99 4.44
7538 8832 4.882427 TGGTTTCCGTTCACATGAGTTTTA 59.118 37.500 0.00 0.00 0.00 1.52
7596 8890 7.821846 CCTTATCTGCACTTCTCTTTCTACTTT 59.178 37.037 0.00 0.00 0.00 2.66
7645 8939 7.390823 TGGTATGCACTGTAGTTTAATTCAGA 58.609 34.615 0.00 0.00 0.00 3.27
7660 8954 4.550076 ATTCAGAAGTCAGGACTCCAAG 57.450 45.455 1.86 0.00 41.58 3.61
7691 8985 7.190920 AGCATTTATGAAGTACGGCTATTTC 57.809 36.000 0.00 0.00 0.00 2.17
7881 9175 9.081204 TCTTTTGAATCTGATGATTTTCCAAGA 57.919 29.630 0.00 0.00 42.43 3.02
7984 9278 1.749063 CAGAGGTATCTGTGGCGTGTA 59.251 52.381 0.00 0.00 46.68 2.90
8047 9341 5.796350 AGATGTTAAAAGCGCGTAAGATT 57.204 34.783 8.43 0.00 43.02 2.40
8084 9378 6.889198 AGCATTTCACTAGCCTTGAGTAATA 58.111 36.000 0.00 0.00 0.00 0.98
8092 9386 8.107095 TCACTAGCCTTGAGTAATATTTTTGGT 58.893 33.333 0.00 0.00 0.00 3.67
8131 9426 8.362639 GCCATGATACATTGTATCCTTCATTTT 58.637 33.333 26.38 5.89 0.00 1.82
8141 9436 7.712264 TGTATCCTTCATTTTGTTTTTGCTG 57.288 32.000 0.00 0.00 0.00 4.41
8147 9442 6.419980 TTCATTTTGTTTTTGCTGTGGAAG 57.580 33.333 0.00 0.00 0.00 3.46
8151 9446 7.984050 TCATTTTGTTTTTGCTGTGGAAGATTA 59.016 29.630 0.00 0.00 0.00 1.75
8201 9497 0.316772 CTAGATACCGGACGTGTGCG 60.317 60.000 9.46 6.95 44.17 5.34
8263 9559 8.934023 AAGGTAGTAATCTTTCAACATCCAAA 57.066 30.769 0.00 0.00 0.00 3.28
8282 9578 9.211485 CATCCAAATTTAACTTCTCTTTGCAAT 57.789 29.630 0.00 0.00 0.00 3.56
8283 9579 8.816640 TCCAAATTTAACTTCTCTTTGCAATC 57.183 30.769 0.00 0.00 0.00 2.67
8363 9660 1.273324 ACCTCAGGCTTAGGTGCTACT 60.273 52.381 19.37 0.00 45.78 2.57
8381 9678 4.509600 GCTACTGTGAGATGACAATTAGCC 59.490 45.833 0.00 0.00 34.37 3.93
8382 9679 4.558226 ACTGTGAGATGACAATTAGCCA 57.442 40.909 0.00 0.00 0.00 4.75
8383 9680 4.910195 ACTGTGAGATGACAATTAGCCAA 58.090 39.130 0.00 0.00 0.00 4.52
8384 9681 5.316167 ACTGTGAGATGACAATTAGCCAAA 58.684 37.500 0.00 0.00 0.00 3.28
8385 9682 5.182001 ACTGTGAGATGACAATTAGCCAAAC 59.818 40.000 0.00 0.00 0.00 2.93
8386 9683 4.458989 TGTGAGATGACAATTAGCCAAACC 59.541 41.667 0.00 0.00 0.00 3.27
8387 9684 4.458989 GTGAGATGACAATTAGCCAAACCA 59.541 41.667 0.00 0.00 0.00 3.67
8388 9685 5.126061 GTGAGATGACAATTAGCCAAACCAT 59.874 40.000 0.00 0.00 0.00 3.55
8389 9686 6.318648 GTGAGATGACAATTAGCCAAACCATA 59.681 38.462 0.00 0.00 0.00 2.74
8436 9733 0.995024 CACATCCAGACCCCCTCTTT 59.005 55.000 0.00 0.00 0.00 2.52
8454 9751 5.932303 CCTCTTTCGTCCTTTATTCTTGACA 59.068 40.000 0.00 0.00 0.00 3.58
8505 9802 4.335594 GGTCCAACCTTAGTGATAATGCAC 59.664 45.833 0.00 0.00 35.71 4.57
8562 9859 0.036875 GGGTTGGTTAGCAGCTCACT 59.963 55.000 0.00 0.00 0.00 3.41
8573 9870 2.012673 GCAGCTCACTTAGGTTCCATG 58.987 52.381 0.00 0.00 32.16 3.66
8585 9882 6.663093 ACTTAGGTTCCATGCAAAACATATGA 59.337 34.615 10.38 0.00 36.64 2.15
8590 9887 7.123997 AGGTTCCATGCAAAACATATGATACAA 59.876 33.333 10.38 0.00 36.64 2.41
8645 9942 6.915544 TGATTCAGTAGAAGACATGCATTC 57.084 37.500 0.00 0.00 37.14 2.67
8647 9944 6.537660 TGATTCAGTAGAAGACATGCATTCAG 59.462 38.462 0.00 0.00 37.14 3.02
8649 9946 5.798132 TCAGTAGAAGACATGCATTCAGTT 58.202 37.500 0.00 0.00 0.00 3.16
8652 9949 7.877612 TCAGTAGAAGACATGCATTCAGTTTTA 59.122 33.333 0.00 0.00 0.00 1.52
8656 9953 7.365741 AGAAGACATGCATTCAGTTTTAGTTG 58.634 34.615 0.00 0.00 0.00 3.16
8661 9958 6.488006 ACATGCATTCAGTTTTAGTTGAGACT 59.512 34.615 0.00 0.00 39.97 3.24
8667 9964 7.482654 TTCAGTTTTAGTTGAGACTGACATG 57.517 36.000 4.68 0.00 45.71 3.21
8668 9965 6.816136 TCAGTTTTAGTTGAGACTGACATGA 58.184 36.000 0.00 0.00 42.42 3.07
8763 10060 7.593825 AGGACTTCACTGTTATAATTGTTTGC 58.406 34.615 0.00 0.00 0.00 3.68
8779 10076 5.843673 TGTTTGCCTACAAAACTCATGAA 57.156 34.783 0.00 0.00 46.94 2.57
8832 10129 2.736721 CGCAGAGGAGAAATTCAAACGA 59.263 45.455 0.00 0.00 0.00 3.85
8890 10187 6.806388 TGGCTACTGCATAATAATGTGATG 57.194 37.500 0.00 0.00 41.91 3.07
8900 10197 9.962809 TGCATAATAATGTGATGAGAATATCCA 57.037 29.630 0.00 0.00 35.38 3.41
8905 10202 8.789825 ATAATGTGATGAGAATATCCAAGCTC 57.210 34.615 0.00 0.00 0.00 4.09
8911 10208 7.663081 GTGATGAGAATATCCAAGCTCCATTAA 59.337 37.037 0.00 0.00 0.00 1.40
8942 10239 2.926200 CCAGCAGACATCAACTTCGTAG 59.074 50.000 0.00 0.00 0.00 3.51
8993 10290 4.569966 CAGACCAACTTCATATCTGCAGAC 59.430 45.833 20.97 0.84 31.14 3.51
9046 10343 3.614092 TGCTTGGCTCTCTAAAGGAATG 58.386 45.455 0.00 0.00 0.00 2.67
9110 10407 8.692710 TGTACCATGTAACATCTCTAAACTAGG 58.307 37.037 0.00 0.00 0.00 3.02
9121 10418 9.905713 ACATCTCTAAACTAGGCATTGATTTAA 57.094 29.630 0.00 0.00 0.00 1.52
9232 10529 8.289618 TGTTTTGCTATCTTTTGTGCTTAGTAG 58.710 33.333 0.00 0.00 0.00 2.57
9239 10536 9.856488 CTATCTTTTGTGCTTAGTAGACAGTTA 57.144 33.333 0.00 0.00 0.00 2.24
9240 10537 8.764524 ATCTTTTGTGCTTAGTAGACAGTTAG 57.235 34.615 0.00 0.00 0.00 2.34
9241 10538 7.723324 TCTTTTGTGCTTAGTAGACAGTTAGT 58.277 34.615 0.00 0.00 0.00 2.24
9245 10542 7.941795 TGTGCTTAGTAGACAGTTAGTTTTC 57.058 36.000 0.00 0.00 0.00 2.29
9246 10543 6.927381 TGTGCTTAGTAGACAGTTAGTTTTCC 59.073 38.462 0.00 0.00 0.00 3.13
9247 10544 6.927381 GTGCTTAGTAGACAGTTAGTTTTCCA 59.073 38.462 0.00 0.00 0.00 3.53
9251 10548 9.760077 CTTAGTAGACAGTTAGTTTTCCAAAGA 57.240 33.333 0.00 0.00 0.00 2.52
9252 10549 9.760077 TTAGTAGACAGTTAGTTTTCCAAAGAG 57.240 33.333 0.00 0.00 0.00 2.85
9253 10550 7.793036 AGTAGACAGTTAGTTTTCCAAAGAGT 58.207 34.615 0.00 0.00 0.00 3.24
9256 10553 7.986562 AGACAGTTAGTTTTCCAAAGAGTTTC 58.013 34.615 0.00 0.00 0.00 2.78
9257 10554 6.782150 ACAGTTAGTTTTCCAAAGAGTTTCG 58.218 36.000 0.00 0.00 0.00 3.46
9317 10617 2.175715 AGTTCTGGTCCTTCAGCCTTTT 59.824 45.455 0.00 0.00 34.91 2.27
9318 10618 2.276732 TCTGGTCCTTCAGCCTTTTG 57.723 50.000 0.00 0.00 34.91 2.44
9341 10641 4.392138 GTGCTGTTACACAATAGGAGTTCC 59.608 45.833 0.00 0.00 40.40 3.62
9354 10654 1.271434 GGAGTTCCCCAAGGACACTTC 60.271 57.143 0.00 0.00 43.90 3.01
9356 10656 0.476771 GTTCCCCAAGGACACTTCCA 59.523 55.000 0.00 0.00 45.72 3.53
9361 10661 2.972021 CCCCAAGGACACTTCCATTTTT 59.028 45.455 0.00 0.00 45.72 1.94
9365 10665 4.284234 CCAAGGACACTTCCATTTTTGGAT 59.716 41.667 4.21 0.00 42.44 3.41
9399 10699 0.322816 TCTGAGCTCAAATGCACCCC 60.323 55.000 18.85 0.00 34.99 4.95
9414 10714 1.526455 CCCCCGTGAACCGTGAAAA 60.526 57.895 0.00 0.00 33.66 2.29
9501 10814 7.477144 AAATTTTGGTTGTGCTTTAGCTTAC 57.523 32.000 0.00 0.00 42.66 2.34
9548 10861 8.829373 AGCCTTAGATTTTATTTGGAGTTCAT 57.171 30.769 0.00 0.00 0.00 2.57
9549 10862 9.259832 AGCCTTAGATTTTATTTGGAGTTCATT 57.740 29.630 0.00 0.00 0.00 2.57
9550 10863 9.875691 GCCTTAGATTTTATTTGGAGTTCATTT 57.124 29.630 0.00 0.00 0.00 2.32
9656 10974 7.127405 TGTACTCTATGTAATACTTGGTCCCA 58.873 38.462 0.00 0.00 32.25 4.37
9662 10980 9.841295 TCTATGTAATACTTGGTCCCAAAATAC 57.159 33.333 0.00 2.75 35.33 1.89
9672 10990 4.853276 TGGTCCCAAAATACTCTCCCTAAA 59.147 41.667 0.00 0.00 0.00 1.85
9811 11143 1.266989 CGAGTGGCCCTTGACTTTTTC 59.733 52.381 0.00 0.00 0.00 2.29
9847 11179 6.131544 AGCACTTTATTCACTCAAAAACGT 57.868 33.333 0.00 0.00 0.00 3.99
9859 11191 9.887406 TTCACTCAAAAACGTTTATAAGGAATC 57.113 29.630 15.03 0.00 0.00 2.52
9874 11206 5.841957 AAGGAATCACAATAATGTCTGGC 57.158 39.130 0.00 0.00 37.82 4.85
9875 11207 4.210331 AGGAATCACAATAATGTCTGGCC 58.790 43.478 0.00 0.00 37.82 5.36
9876 11208 4.079558 AGGAATCACAATAATGTCTGGCCT 60.080 41.667 3.32 0.00 37.82 5.19
9877 11209 5.132648 AGGAATCACAATAATGTCTGGCCTA 59.867 40.000 3.32 0.00 37.82 3.93
9878 11210 6.006449 GGAATCACAATAATGTCTGGCCTAT 58.994 40.000 3.32 0.00 37.82 2.57
9879 11211 6.150140 GGAATCACAATAATGTCTGGCCTATC 59.850 42.308 3.32 0.00 37.82 2.08
9880 11212 5.628797 TCACAATAATGTCTGGCCTATCA 57.371 39.130 3.32 0.00 37.82 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.517316 GTGATGGCTTCGTGGTTGTC 59.483 55.000 0.00 0.00 0.00 3.18
4 5 2.325082 GCGTGATGGCTTCGTGGTT 61.325 57.895 0.00 0.00 0.00 3.67
5 6 2.742372 GCGTGATGGCTTCGTGGT 60.742 61.111 0.00 0.00 0.00 4.16
6 7 3.853330 CGCGTGATGGCTTCGTGG 61.853 66.667 0.00 0.00 0.00 4.94
7 8 4.505217 GCGCGTGATGGCTTCGTG 62.505 66.667 8.43 0.00 37.98 4.35
9 10 4.214383 CTGCGCGTGATGGCTTCG 62.214 66.667 8.43 0.00 0.00 3.79
10 11 3.869272 CCTGCGCGTGATGGCTTC 61.869 66.667 8.43 0.00 0.00 3.86
14 15 3.266230 TTTTGCCTGCGCGTGATGG 62.266 57.895 8.43 6.21 38.08 3.51
15 16 1.798725 CTTTTGCCTGCGCGTGATG 60.799 57.895 8.43 0.00 38.08 3.07
16 17 2.562912 CTTTTGCCTGCGCGTGAT 59.437 55.556 8.43 0.00 38.08 3.06
17 18 4.326766 GCTTTTGCCTGCGCGTGA 62.327 61.111 8.43 0.00 40.15 4.35
28 29 3.181495 TGTGGTTGACGGTTTAGCTTTTG 60.181 43.478 0.00 0.00 0.00 2.44
29 30 3.018149 TGTGGTTGACGGTTTAGCTTTT 58.982 40.909 0.00 0.00 0.00 2.27
35 36 1.489070 CGCGTGTGGTTGACGGTTTA 61.489 55.000 0.00 0.00 37.30 2.01
65 66 0.684479 TCCACATAGTCGGAGCTGCT 60.684 55.000 0.00 0.00 0.00 4.24
69 70 0.029567 CTCGTCCACATAGTCGGAGC 59.970 60.000 0.00 0.00 29.98 4.70
78 79 1.028330 CCTGCAATGCTCGTCCACAT 61.028 55.000 6.82 0.00 0.00 3.21
82 83 0.391661 TTCTCCTGCAATGCTCGTCC 60.392 55.000 6.82 0.00 0.00 4.79
129 130 2.743928 CAGGCGGTCAGTTCTGGC 60.744 66.667 0.00 0.00 39.17 4.85
132 133 2.925170 AGGCAGGCGGTCAGTTCT 60.925 61.111 0.00 0.00 0.00 3.01
184 185 4.142160 ACTTGGTCTTTTTGGAGTCAAAGC 60.142 41.667 0.00 0.00 42.93 3.51
187 188 4.594970 TCACTTGGTCTTTTTGGAGTCAA 58.405 39.130 0.00 0.00 0.00 3.18
188 189 4.229304 TCACTTGGTCTTTTTGGAGTCA 57.771 40.909 0.00 0.00 0.00 3.41
194 195 3.108144 CGTGCTTCACTTGGTCTTTTTG 58.892 45.455 0.00 0.00 31.34 2.44
196 197 2.354821 GTCGTGCTTCACTTGGTCTTTT 59.645 45.455 0.00 0.00 31.34 2.27
210 211 2.504274 TTCGAGGGGTTGTCGTGCT 61.504 57.895 0.00 0.00 38.60 4.40
227 228 2.264794 GGTCTCATCCGGCGTGTT 59.735 61.111 6.01 0.00 0.00 3.32
258 259 1.926511 GCGGAGTTGGGTTGCATCTG 61.927 60.000 0.00 0.00 0.00 2.90
261 262 3.055719 CGCGGAGTTGGGTTGCAT 61.056 61.111 0.00 0.00 0.00 3.96
267 268 3.423154 GCTTCACGCGGAGTTGGG 61.423 66.667 12.47 0.00 0.00 4.12
270 271 3.044305 GCAGCTTCACGCGGAGTT 61.044 61.111 12.47 0.00 45.59 3.01
277 278 1.133253 CAACGATGGCAGCTTCACG 59.867 57.895 0.00 0.00 0.00 4.35
278 279 1.154150 GCAACGATGGCAGCTTCAC 60.154 57.895 0.00 0.00 0.00 3.18
288 289 1.603802 ACTTCTTGTGTGGCAACGATG 59.396 47.619 0.00 0.00 42.51 3.84
301 302 3.243035 TGAATGGTTTGCACGACTTCTTG 60.243 43.478 0.00 0.00 0.00 3.02
310 311 1.339711 GCGATGTGAATGGTTTGCAC 58.660 50.000 0.00 0.00 0.00 4.57
350 352 0.247419 CTGAACGTGCATGACATCGC 60.247 55.000 14.17 3.71 0.00 4.58
352 354 1.061711 GAGCTGAACGTGCATGACATC 59.938 52.381 14.17 8.39 0.00 3.06
358 360 1.376424 CCTGGAGCTGAACGTGCAT 60.376 57.895 0.00 0.00 0.00 3.96
364 366 1.916697 GCGCTTTCCTGGAGCTGAAC 61.917 60.000 0.00 0.00 37.99 3.18
367 369 3.494336 CGCGCTTTCCTGGAGCTG 61.494 66.667 5.56 2.09 37.99 4.24
375 377 2.761195 GGTCCCATTCGCGCTTTCC 61.761 63.158 5.56 0.00 0.00 3.13
379 381 2.114670 CATTGGTCCCATTCGCGCT 61.115 57.895 5.56 0.00 0.00 5.92
424 426 1.883084 CATTCTCCCACGCCGCTAC 60.883 63.158 0.00 0.00 0.00 3.58
432 434 1.154205 CGATGGCGTCATTCTCCCAC 61.154 60.000 2.92 0.00 32.98 4.61
436 438 1.227380 AGGCGATGGCGTCATTCTC 60.227 57.895 2.92 0.00 46.48 2.87
437 439 1.522355 CAGGCGATGGCGTCATTCT 60.522 57.895 2.92 0.00 46.48 2.40
438 440 1.521457 TCAGGCGATGGCGTCATTC 60.521 57.895 2.92 0.00 46.48 2.67
439 441 1.815421 GTCAGGCGATGGCGTCATT 60.815 57.895 2.92 0.00 46.48 2.57
440 442 2.202932 GTCAGGCGATGGCGTCAT 60.203 61.111 0.00 0.00 46.48 3.06
441 443 3.356639 GAGTCAGGCGATGGCGTCA 62.357 63.158 7.60 0.00 46.48 4.35
442 444 2.583593 GAGTCAGGCGATGGCGTC 60.584 66.667 0.00 0.00 43.85 5.19
443 445 3.381983 TGAGTCAGGCGATGGCGT 61.382 61.111 0.00 0.00 39.07 5.68
444 446 2.887568 GTGAGTCAGGCGATGGCG 60.888 66.667 0.00 0.00 39.07 5.69
445 447 1.375908 TTGTGAGTCAGGCGATGGC 60.376 57.895 0.00 0.00 38.90 4.40
447 449 1.354337 CCGTTGTGAGTCAGGCGATG 61.354 60.000 11.11 0.00 0.00 3.84
448 450 1.079819 CCGTTGTGAGTCAGGCGAT 60.080 57.895 11.11 0.00 0.00 4.58
449 451 2.142357 CTCCGTTGTGAGTCAGGCGA 62.142 60.000 11.11 0.00 0.00 5.54
450 452 1.734477 CTCCGTTGTGAGTCAGGCG 60.734 63.158 0.00 0.00 0.00 5.52
451 453 1.367840 ACTCCGTTGTGAGTCAGGC 59.632 57.895 0.00 0.00 41.75 4.85
457 459 0.389166 GCCTCAGACTCCGTTGTGAG 60.389 60.000 0.00 0.00 36.89 3.51
459 461 1.374758 GGCCTCAGACTCCGTTGTG 60.375 63.158 0.00 0.00 0.00 3.33
460 462 2.932234 CGGCCTCAGACTCCGTTGT 61.932 63.158 0.00 0.00 38.47 3.32
461 463 2.125912 CGGCCTCAGACTCCGTTG 60.126 66.667 0.00 0.00 38.47 4.10
463 465 3.063084 GTCGGCCTCAGACTCCGT 61.063 66.667 0.00 0.00 43.35 4.69
464 466 2.752238 AGTCGGCCTCAGACTCCG 60.752 66.667 6.00 0.00 44.87 4.63
472 474 1.021390 CAATGGTGTGAGTCGGCCTC 61.021 60.000 0.00 0.00 40.89 4.70
473 475 1.003355 CAATGGTGTGAGTCGGCCT 60.003 57.895 0.00 0.00 0.00 5.19
474 476 0.392998 ATCAATGGTGTGAGTCGGCC 60.393 55.000 0.00 0.00 0.00 6.13
475 477 1.131126 CAATCAATGGTGTGAGTCGGC 59.869 52.381 0.00 0.00 0.00 5.54
476 478 1.739466 CCAATCAATGGTGTGAGTCGG 59.261 52.381 0.00 0.00 44.85 4.79
487 489 8.236585 TGTAGACCATTAAATCCCAATCAATG 57.763 34.615 0.00 0.00 0.00 2.82
488 490 8.837099 TTGTAGACCATTAAATCCCAATCAAT 57.163 30.769 0.00 0.00 0.00 2.57
490 492 7.410174 ACTTGTAGACCATTAAATCCCAATCA 58.590 34.615 0.00 0.00 0.00 2.57
491 493 7.881775 ACTTGTAGACCATTAAATCCCAATC 57.118 36.000 0.00 0.00 0.00 2.67
493 495 7.334921 CGTAACTTGTAGACCATTAAATCCCAA 59.665 37.037 0.00 0.00 0.00 4.12
495 497 6.238293 GCGTAACTTGTAGACCATTAAATCCC 60.238 42.308 0.00 0.00 0.00 3.85
496 498 6.509039 CGCGTAACTTGTAGACCATTAAATCC 60.509 42.308 0.00 0.00 0.00 3.01
497 499 6.408428 CGCGTAACTTGTAGACCATTAAATC 58.592 40.000 0.00 0.00 0.00 2.17
498 500 5.220529 GCGCGTAACTTGTAGACCATTAAAT 60.221 40.000 8.43 0.00 0.00 1.40
499 501 4.091800 GCGCGTAACTTGTAGACCATTAAA 59.908 41.667 8.43 0.00 0.00 1.52
500 502 3.613737 GCGCGTAACTTGTAGACCATTAA 59.386 43.478 8.43 0.00 0.00 1.40
503 505 1.067425 TGCGCGTAACTTGTAGACCAT 60.067 47.619 8.43 0.00 0.00 3.55
504 506 0.314618 TGCGCGTAACTTGTAGACCA 59.685 50.000 8.43 0.00 0.00 4.02
505 507 1.421382 TTGCGCGTAACTTGTAGACC 58.579 50.000 5.23 0.00 0.00 3.85
506 508 3.855950 ACTATTGCGCGTAACTTGTAGAC 59.144 43.478 12.98 0.00 0.00 2.59
508 510 4.835199 AACTATTGCGCGTAACTTGTAG 57.165 40.909 12.98 12.36 0.00 2.74
510 512 4.477302 AAAACTATTGCGCGTAACTTGT 57.523 36.364 12.98 8.55 0.00 3.16
511 513 5.375717 TGTAAAACTATTGCGCGTAACTTG 58.624 37.500 12.98 7.88 0.00 3.16
512 514 5.594724 TGTAAAACTATTGCGCGTAACTT 57.405 34.783 12.98 0.00 0.00 2.66
513 515 5.121142 ACATGTAAAACTATTGCGCGTAACT 59.879 36.000 12.98 4.49 0.00 2.24
514 516 5.318349 ACATGTAAAACTATTGCGCGTAAC 58.682 37.500 12.98 0.00 0.00 2.50
516 518 4.626172 TGACATGTAAAACTATTGCGCGTA 59.374 37.500 8.43 0.00 0.00 4.42
518 520 3.778718 GTGACATGTAAAACTATTGCGCG 59.221 43.478 0.00 0.00 0.00 6.86
520 522 4.781026 CACGTGACATGTAAAACTATTGCG 59.219 41.667 10.90 0.00 0.00 4.85
521 523 5.685841 ACACGTGACATGTAAAACTATTGC 58.314 37.500 25.01 0.00 0.00 3.56
522 524 7.738609 GTGTACACGTGACATGTAAAACTATTG 59.261 37.037 25.01 0.00 34.41 1.90
523 525 7.438757 TGTGTACACGTGACATGTAAAACTATT 59.561 33.333 25.01 0.00 34.41 1.73
524 526 6.924612 TGTGTACACGTGACATGTAAAACTAT 59.075 34.615 25.01 0.00 34.41 2.12
525 527 6.271566 TGTGTACACGTGACATGTAAAACTA 58.728 36.000 25.01 0.00 34.41 2.24
526 528 5.110598 TGTGTACACGTGACATGTAAAACT 58.889 37.500 25.01 0.00 34.41 2.66
527 529 5.392480 TGTGTACACGTGACATGTAAAAC 57.608 39.130 25.01 8.70 34.41 2.43
529 531 4.508492 CCTTGTGTACACGTGACATGTAAA 59.492 41.667 25.01 13.00 34.41 2.01
530 532 4.052608 CCTTGTGTACACGTGACATGTAA 58.947 43.478 25.01 15.44 34.41 2.41
532 534 2.479837 CCTTGTGTACACGTGACATGT 58.520 47.619 25.01 0.00 0.00 3.21
533 535 1.798223 CCCTTGTGTACACGTGACATG 59.202 52.381 25.01 17.01 0.00 3.21
535 537 0.531090 GCCCTTGTGTACACGTGACA 60.531 55.000 25.01 18.49 0.00 3.58
536 538 1.554042 CGCCCTTGTGTACACGTGAC 61.554 60.000 25.01 16.06 0.00 3.67
537 539 1.300311 CGCCCTTGTGTACACGTGA 60.300 57.895 25.01 8.68 0.00 4.35
538 540 2.314647 CCGCCCTTGTGTACACGTG 61.315 63.158 20.61 15.48 0.00 4.49
539 541 1.823169 ATCCGCCCTTGTGTACACGT 61.823 55.000 20.61 0.00 0.00 4.49
543 545 0.462047 CTGGATCCGCCCTTGTGTAC 60.462 60.000 7.39 0.00 34.97 2.90
544 546 0.616395 TCTGGATCCGCCCTTGTGTA 60.616 55.000 7.39 0.00 34.97 2.90
546 548 1.153289 CTCTGGATCCGCCCTTGTG 60.153 63.158 7.39 0.00 34.97 3.33
548 550 1.045350 TCTCTCTGGATCCGCCCTTG 61.045 60.000 7.39 0.00 34.97 3.61
549 551 0.325671 TTCTCTCTGGATCCGCCCTT 60.326 55.000 7.39 0.00 34.97 3.95
551 553 0.761802 ATTTCTCTCTGGATCCGCCC 59.238 55.000 7.39 0.00 34.97 6.13
553 555 1.414181 TCCATTTCTCTCTGGATCCGC 59.586 52.381 7.39 0.00 36.63 5.54
554 556 3.070734 ACATCCATTTCTCTCTGGATCCG 59.929 47.826 7.39 2.06 46.95 4.18
555 557 4.387598 CACATCCATTTCTCTCTGGATCC 58.612 47.826 4.20 4.20 46.95 3.36
556 558 4.141528 ACCACATCCATTTCTCTCTGGATC 60.142 45.833 1.14 0.00 46.95 3.36
559 561 3.276857 CACCACATCCATTTCTCTCTGG 58.723 50.000 0.00 0.00 0.00 3.86
560 562 2.681848 GCACCACATCCATTTCTCTCTG 59.318 50.000 0.00 0.00 0.00 3.35
561 563 2.356535 GGCACCACATCCATTTCTCTCT 60.357 50.000 0.00 0.00 0.00 3.10
562 564 2.019984 GGCACCACATCCATTTCTCTC 58.980 52.381 0.00 0.00 0.00 3.20
563 565 2.134789 GGCACCACATCCATTTCTCT 57.865 50.000 0.00 0.00 0.00 3.10
578 580 9.618890 AATATGTGTGATTATATGATAGGGCAC 57.381 33.333 0.00 0.00 0.00 5.01
606 608 8.219546 TGTGACACTTCATCATTAGACAAAAA 57.780 30.769 7.20 0.00 33.11 1.94
609 611 7.275560 CGTATGTGACACTTCATCATTAGACAA 59.724 37.037 7.20 0.00 33.11 3.18
610 612 6.751888 CGTATGTGACACTTCATCATTAGACA 59.248 38.462 7.20 0.00 33.11 3.41
611 613 6.291849 GCGTATGTGACACTTCATCATTAGAC 60.292 42.308 7.20 0.00 33.11 2.59
612 614 5.748630 GCGTATGTGACACTTCATCATTAGA 59.251 40.000 7.20 0.00 33.11 2.10
613 615 5.519927 TGCGTATGTGACACTTCATCATTAG 59.480 40.000 7.20 0.00 33.11 1.73
614 616 5.415221 TGCGTATGTGACACTTCATCATTA 58.585 37.500 7.20 0.00 33.11 1.90
615 617 4.252878 TGCGTATGTGACACTTCATCATT 58.747 39.130 7.20 0.00 33.11 2.57
616 618 3.860641 TGCGTATGTGACACTTCATCAT 58.139 40.909 7.20 0.00 33.11 2.45
620 622 3.311486 TGATGCGTATGTGACACTTCA 57.689 42.857 7.20 0.00 0.00 3.02
621 623 3.679980 ACTTGATGCGTATGTGACACTTC 59.320 43.478 7.20 0.00 0.00 3.01
624 626 2.094258 CCACTTGATGCGTATGTGACAC 59.906 50.000 0.00 0.00 0.00 3.67
625 627 2.345876 CCACTTGATGCGTATGTGACA 58.654 47.619 4.38 0.00 0.00 3.58
626 628 1.062587 GCCACTTGATGCGTATGTGAC 59.937 52.381 4.38 0.00 0.00 3.67
628 630 1.085893 TGCCACTTGATGCGTATGTG 58.914 50.000 0.00 0.00 0.00 3.21
629 631 1.672363 CATGCCACTTGATGCGTATGT 59.328 47.619 0.00 0.00 0.00 2.29
631 633 0.664761 GCATGCCACTTGATGCGTAT 59.335 50.000 6.36 0.00 35.95 3.06
632 634 2.097444 GCATGCCACTTGATGCGTA 58.903 52.632 6.36 0.00 35.95 4.42
704 970 9.796180 GACTAACTAATTAGAGAGGGTGATCTA 57.204 37.037 19.38 0.00 40.38 1.98
766 1032 0.680061 GGGACTAATACCCTGCCTCG 59.320 60.000 0.00 0.00 43.65 4.63
841 1138 4.463186 GTGTGAGAGAGTACTTATGTGGGT 59.537 45.833 0.00 0.00 0.00 4.51
866 1163 2.949177 TTGTGACCCATGTGTTAGCT 57.051 45.000 0.00 0.00 0.00 3.32
952 1249 2.665185 ACCTTTCGCCGCTGTGTC 60.665 61.111 0.00 0.00 0.00 3.67
960 1268 2.203294 ACACCCACACCTTTCGCC 60.203 61.111 0.00 0.00 0.00 5.54
1192 1503 9.403583 AGAGGCGGATCTAACAAAATAAAAATA 57.596 29.630 0.00 0.00 0.00 1.40
1217 1528 2.936498 CCTACCGACCAACTGCAAATAG 59.064 50.000 0.00 0.00 0.00 1.73
1620 1932 4.757594 ACAAGCAAGCATCTAGAGAGAAG 58.242 43.478 0.00 0.00 34.61 2.85
1627 1939 4.083855 TCGTCAAAACAAGCAAGCATCTAG 60.084 41.667 0.00 0.00 0.00 2.43
1672 1985 4.022849 GTCCAAATTCACCTTGAGGAACTG 60.023 45.833 3.59 0.00 41.55 3.16
1772 2085 7.060383 TGATTTTGGAAAGCACAAGGAATTA 57.940 32.000 0.00 0.00 0.00 1.40
1826 2139 2.289002 AGCTTTGCGAGTTTGTCTCAAG 59.711 45.455 0.00 0.00 42.88 3.02
1881 2194 1.910580 GCCACCCGGGAGATCTCAAA 61.911 60.000 32.02 0.00 40.01 2.69
1926 2239 4.839121 TCACGAAGCATGTATTAACCCTT 58.161 39.130 0.00 0.00 0.00 3.95
1969 2282 6.372937 AGTTTTAAGCATGAGTTTAGGAGCTC 59.627 38.462 4.71 4.71 34.08 4.09
2179 2492 4.035208 AGTTTTTAATGCCATCGACGATCC 59.965 41.667 7.54 2.75 0.00 3.36
2275 2588 1.009829 GTGGATGCCGCTGTTTCTAG 58.990 55.000 0.00 0.00 0.00 2.43
2285 2598 1.811965 TGAAGTTCAATGTGGATGCCG 59.188 47.619 2.20 0.00 0.00 5.69
2335 2648 3.586618 AGGAATCCATTGCCTAGATCCTC 59.413 47.826 0.61 0.00 0.00 3.71
2397 2710 9.186837 ACTCATTGCTTCATATCATCTTTCTTT 57.813 29.630 0.00 0.00 0.00 2.52
2422 2735 8.293157 GGAAATTTATCAAAGCCTGCTATCTAC 58.707 37.037 0.00 0.00 0.00 2.59
2443 2756 4.106324 AGAAAGGCAAATCATGGGGAAAT 58.894 39.130 0.00 0.00 0.00 2.17
2565 2878 3.309296 ACATATGAGGTCGAACCAGGAT 58.691 45.455 10.38 0.00 41.95 3.24
2643 2956 1.989165 GACAGCTGACGCTACTCTTTG 59.011 52.381 23.35 0.00 46.99 2.77
2645 2958 0.528470 GGACAGCTGACGCTACTCTT 59.472 55.000 23.35 0.00 46.99 2.85
2753 3066 8.122330 CCTCAAAAATTAAAGTTTTTCTGTGGC 58.878 33.333 0.00 0.00 38.77 5.01
2823 3136 2.030540 CACAGGTTGCTTGGATCACTTG 60.031 50.000 0.00 0.00 0.00 3.16
2854 3167 1.203441 TGCAGCAGAGAAGGGTGGAT 61.203 55.000 0.00 0.00 34.47 3.41
2884 3197 2.414138 GCTCGGCGTACAAACTTATTGT 59.586 45.455 6.85 0.00 36.49 2.71
2902 3215 0.238553 GGGCGTTTTTCAGTGAGCTC 59.761 55.000 6.82 6.82 0.00 4.09
2938 3251 4.487714 TGGTAGATGACTTTTGGGCTAG 57.512 45.455 0.00 0.00 0.00 3.42
3073 3386 4.530857 CCGCCCAGGAAGGTAGCG 62.531 72.222 0.00 0.00 44.52 4.26
3161 3474 8.019656 TGAAGGATAGGAGATGGTAAAACTAC 57.980 38.462 0.00 0.00 0.00 2.73
3759 4072 3.711190 AGCAGGGAAAAAGAAAACCATGT 59.289 39.130 0.00 0.00 36.71 3.21
3760 4073 4.341366 AGCAGGGAAAAAGAAAACCATG 57.659 40.909 0.00 0.00 37.28 3.66
3761 4074 5.602561 AGTAAGCAGGGAAAAAGAAAACCAT 59.397 36.000 0.00 0.00 0.00 3.55
3762 4075 4.959839 AGTAAGCAGGGAAAAAGAAAACCA 59.040 37.500 0.00 0.00 0.00 3.67
3763 4076 5.509163 GGAGTAAGCAGGGAAAAAGAAAACC 60.509 44.000 0.00 0.00 0.00 3.27
3764 4077 5.509163 GGGAGTAAGCAGGGAAAAAGAAAAC 60.509 44.000 0.00 0.00 0.00 2.43
3765 4078 4.587262 GGGAGTAAGCAGGGAAAAAGAAAA 59.413 41.667 0.00 0.00 0.00 2.29
3766 4079 4.149598 GGGAGTAAGCAGGGAAAAAGAAA 58.850 43.478 0.00 0.00 0.00 2.52
3767 4080 3.499745 GGGGAGTAAGCAGGGAAAAAGAA 60.500 47.826 0.00 0.00 0.00 2.52
3768 4081 2.041216 GGGGAGTAAGCAGGGAAAAAGA 59.959 50.000 0.00 0.00 0.00 2.52
3769 4082 2.225017 TGGGGAGTAAGCAGGGAAAAAG 60.225 50.000 0.00 0.00 0.00 2.27
3770 4083 1.783979 TGGGGAGTAAGCAGGGAAAAA 59.216 47.619 0.00 0.00 0.00 1.94
3873 4187 7.309194 GGTGTTAATTAAATCAGTTGCTCAGGT 60.309 37.037 0.00 0.00 0.00 4.00
3948 4262 2.107950 TTGCGTGATAGAGTTTGGGG 57.892 50.000 0.00 0.00 0.00 4.96
3970 4285 3.701241 TCAAAGAATGGCACGTTCAAAC 58.299 40.909 3.86 0.00 0.00 2.93
4107 4423 5.067805 GGGTGAACCATGATAAATCCTCAAC 59.932 44.000 1.16 0.00 39.85 3.18
4348 4665 2.171448 AGACAGGGAGATCCAATTTCCG 59.829 50.000 0.47 0.00 38.24 4.30
4397 4714 9.264719 CAGTTTTATTCAATGGAGAAAAGCTTT 57.735 29.630 5.69 5.69 0.00 3.51
4829 5152 1.836166 ACATCACCATGTGGAGGAGAG 59.164 52.381 5.96 3.40 42.05 3.20
5325 5656 0.603707 CTCTTTGGAGGTTGCGCTGA 60.604 55.000 9.73 0.00 36.03 4.26
6019 6381 4.268939 TGTGCTTGCTGCCGTTGC 62.269 61.111 0.00 0.00 42.00 4.17
6022 6384 4.943252 AGCTGTGCTTGCTGCCGT 62.943 61.111 0.00 0.00 42.00 5.68
6131 6493 2.733218 TTTCTCCACGCGCGACTG 60.733 61.111 39.36 25.15 0.00 3.51
6174 6536 4.176752 GAGTCGGGTGGGGATGGC 62.177 72.222 0.00 0.00 0.00 4.40
6198 6560 2.203126 CTGCGGCCTGAATCTCCC 60.203 66.667 0.00 0.00 0.00 4.30
6218 6580 0.178767 TCTTCGTCGTCGGGATCCTA 59.821 55.000 12.58 0.00 37.69 2.94
6229 6591 3.554692 GCCGCCATGTCTTCGTCG 61.555 66.667 0.00 0.00 0.00 5.12
6258 6620 2.158957 TGTGGATTCAGGCCGTATCTTC 60.159 50.000 12.50 8.01 0.00 2.87
6263 6625 0.251916 CCTTGTGGATTCAGGCCGTA 59.748 55.000 0.00 0.00 34.57 4.02
6267 6629 3.056313 GCGCCTTGTGGATTCAGGC 62.056 63.158 0.00 0.00 41.84 4.85
6395 6764 0.173708 CTACCTCTCCTCACCGTTGC 59.826 60.000 0.00 0.00 0.00 4.17
6397 6766 0.324460 CCCTACCTCTCCTCACCGTT 60.324 60.000 0.00 0.00 0.00 4.44
6402 6771 2.279073 CGCCCCTACCTCTCCTCA 59.721 66.667 0.00 0.00 0.00 3.86
6440 6809 2.131709 CGGGCGGAACCTAGATCCA 61.132 63.158 13.10 0.00 39.10 3.41
6484 6853 2.695359 TGCAACTTTGTATCTCCCGTC 58.305 47.619 0.00 0.00 0.00 4.79
6601 7732 3.308188 CCCTCCTTCCCGAATTAGTTGTT 60.308 47.826 0.00 0.00 0.00 2.83
6617 7748 3.826729 GCAAACAAATTACACTCCCTCCT 59.173 43.478 0.00 0.00 0.00 3.69
6619 7750 5.221244 ACAAGCAAACAAATTACACTCCCTC 60.221 40.000 0.00 0.00 0.00 4.30
6624 7755 6.475402 GCACTTACAAGCAAACAAATTACACT 59.525 34.615 0.00 0.00 0.00 3.55
6625 7756 6.254589 TGCACTTACAAGCAAACAAATTACAC 59.745 34.615 0.00 0.00 37.90 2.90
6626 7757 6.254589 GTGCACTTACAAGCAAACAAATTACA 59.745 34.615 10.32 0.00 43.20 2.41
6627 7758 6.475402 AGTGCACTTACAAGCAAACAAATTAC 59.525 34.615 15.25 0.00 43.20 1.89
6748 7879 5.851720 TGCATAAAAATTGAACCTCTGCAA 58.148 33.333 0.00 0.00 34.48 4.08
6911 8042 8.261522 GCCAATCATTTTAACCTAATTACCCAA 58.738 33.333 0.00 0.00 0.00 4.12
6912 8043 7.621683 AGCCAATCATTTTAACCTAATTACCCA 59.378 33.333 0.00 0.00 0.00 4.51
6913 8044 8.018537 AGCCAATCATTTTAACCTAATTACCC 57.981 34.615 0.00 0.00 0.00 3.69
6928 8059 3.322828 AGCAGTTGTGAAAGCCAATCATT 59.677 39.130 0.00 0.00 0.00 2.57
7038 8331 7.994425 TCTCAAAACACTGCATTTATTCCTA 57.006 32.000 0.00 0.00 0.00 2.94
7040 8333 7.787084 GTTTCTCAAAACACTGCATTTATTCC 58.213 34.615 0.00 0.00 43.52 3.01
7061 8354 8.893727 GCAGGGTATATATGGTTCATATGTTTC 58.106 37.037 1.90 0.00 37.57 2.78
7107 8400 7.716998 AGATCTTCTAGAACAAACTTTGAGCAA 59.283 33.333 8.55 0.00 0.00 3.91
7153 8446 5.221009 GCTGCCAATCTCAGAAAGGATTAAG 60.221 44.000 0.00 0.00 33.54 1.85
7164 8457 2.098770 GCCTTAAAGCTGCCAATCTCAG 59.901 50.000 0.00 0.00 34.79 3.35
7296 8589 3.119708 GGGAGCACAAAAATACAGAGCAG 60.120 47.826 0.00 0.00 0.00 4.24
7341 8634 6.036953 GTCATTTTGATTGAAAACTGCAACCA 59.963 34.615 0.00 0.00 36.35 3.67
7455 8749 2.171237 CCATGAAGGTCCACTAGATGCA 59.829 50.000 0.00 0.00 0.00 3.96
7488 8782 0.530744 TCGAATCTCTGACCCAACGG 59.469 55.000 0.00 0.00 0.00 4.44
7525 8819 9.297586 GACAGTATCGTAATAAAACTCATGTGA 57.702 33.333 0.94 0.00 0.00 3.58
7538 8832 4.876107 CCCTGCTTTTGACAGTATCGTAAT 59.124 41.667 0.00 0.00 33.09 1.89
7645 8939 5.743422 GCTTAAGAACTTGGAGTCCTGACTT 60.743 44.000 11.33 14.55 42.66 3.01
7660 8954 6.905609 GCCGTACTTCATAAATGCTTAAGAAC 59.094 38.462 6.67 0.00 0.00 3.01
7719 9013 8.000127 ACCCAAACTTTATAAGGTTCAGTACAA 59.000 33.333 12.80 0.00 35.93 2.41
7881 9175 5.997746 TGAATGAGAACGTCTTGAATTCCTT 59.002 36.000 2.27 0.00 0.00 3.36
7914 9208 4.346709 TCTGTTTCATAACTCCAGTGTCCA 59.653 41.667 0.00 0.00 35.24 4.02
7981 9275 4.777896 AGTACTCAATCCAAGAGCCTTACA 59.222 41.667 0.00 0.00 36.58 2.41
7984 9278 4.534103 AGAAGTACTCAATCCAAGAGCCTT 59.466 41.667 0.00 0.00 36.58 4.35
8047 9341 2.957680 TGAAATGCTCAAAGCCTCAACA 59.042 40.909 0.00 0.00 41.51 3.33
8084 9378 4.932146 GCTCGTGCCATAATACCAAAAAT 58.068 39.130 0.00 0.00 0.00 1.82
8102 9396 4.825422 AGGATACAATGTATCATGGCTCG 58.175 43.478 28.18 0.00 41.41 5.03
8117 9412 7.224362 CACAGCAAAAACAAAATGAAGGATACA 59.776 33.333 0.00 0.00 41.41 2.29
8131 9426 9.255304 GTAAAATAATCTTCCACAGCAAAAACA 57.745 29.630 0.00 0.00 0.00 2.83
8151 9446 8.694171 AAAGGGGAGGAAATAAATGGTAAAAT 57.306 30.769 0.00 0.00 0.00 1.82
8165 9461 6.557633 GGTATCTAGTATGAAAAGGGGAGGAA 59.442 42.308 0.00 0.00 0.00 3.36
8201 9497 2.289320 ACGATCTGGATGCCATCTAAGC 60.289 50.000 4.41 0.00 30.82 3.09
8299 9595 9.902684 AGATTATCACAGAATGAAATGAAGAGT 57.097 29.630 0.00 0.00 41.93 3.24
8301 9597 8.618677 GCAGATTATCACAGAATGAAATGAAGA 58.381 33.333 0.00 0.00 41.93 2.87
8353 9650 3.697166 TGTCATCTCACAGTAGCACCTA 58.303 45.455 0.00 0.00 0.00 3.08
8363 9660 4.458989 GGTTTGGCTAATTGTCATCTCACA 59.541 41.667 0.00 0.00 0.00 3.58
8436 9733 6.567701 GCATTTGTGTCAAGAATAAAGGACGA 60.568 38.462 0.00 0.00 33.04 4.20
8470 9767 1.404047 GGTTGGACCATTGGAAATGCG 60.404 52.381 10.37 0.00 38.42 4.73
8474 9771 4.141135 TCACTAAGGTTGGACCATTGGAAA 60.141 41.667 10.37 0.00 41.95 3.13
8545 9842 3.003480 CCTAAGTGAGCTGCTAACCAAC 58.997 50.000 13.60 2.62 0.00 3.77
8562 9859 7.658525 ATCATATGTTTTGCATGGAACCTAA 57.341 32.000 0.00 0.00 38.47 2.69
8616 9913 8.641541 TGCATGTCTTCTACTGAATCATGTATA 58.358 33.333 16.71 8.27 41.17 1.47
8618 9915 6.877236 TGCATGTCTTCTACTGAATCATGTA 58.123 36.000 16.71 13.02 41.17 2.29
8645 9942 7.664082 ATCATGTCAGTCTCAACTAAAACTG 57.336 36.000 0.00 0.00 40.34 3.16
8647 9944 7.819900 AGGTATCATGTCAGTCTCAACTAAAAC 59.180 37.037 0.00 0.00 33.25 2.43
8649 9946 7.323420 CAGGTATCATGTCAGTCTCAACTAAA 58.677 38.462 0.00 0.00 33.25 1.85
8652 9949 4.382470 GCAGGTATCATGTCAGTCTCAACT 60.382 45.833 0.00 0.00 35.60 3.16
8656 9953 3.808466 TGCAGGTATCATGTCAGTCTC 57.192 47.619 0.00 0.00 0.00 3.36
8661 9958 5.243507 ACAATGTTTTGCAGGTATCATGTCA 59.756 36.000 0.00 0.00 36.22 3.58
8667 9964 7.989826 AGAAGATACAATGTTTTGCAGGTATC 58.010 34.615 0.00 0.00 42.47 2.24
8668 9965 7.944729 AGAAGATACAATGTTTTGCAGGTAT 57.055 32.000 0.00 0.00 36.22 2.73
8701 9998 8.466086 AAAAACAGAAGTTCAGAACATCAAAC 57.534 30.769 18.42 3.26 36.84 2.93
8735 10032 7.145932 ACAATTATAACAGTGAAGTCCTTGC 57.854 36.000 0.00 0.00 0.00 4.01
8753 10050 7.946207 TCATGAGTTTTGTAGGCAAACAATTA 58.054 30.769 6.31 0.00 43.47 1.40
8779 10076 8.495160 TGCCCATGAAAGAAAATCCATAATAT 57.505 30.769 0.00 0.00 0.00 1.28
8890 10187 7.887495 AGGAATTAATGGAGCTTGGATATTCTC 59.113 37.037 0.00 0.00 0.00 2.87
8900 10197 4.264352 TGGTGGAAGGAATTAATGGAGCTT 60.264 41.667 0.00 0.00 0.00 3.74
8905 10202 3.364549 TGCTGGTGGAAGGAATTAATGG 58.635 45.455 0.00 0.00 0.00 3.16
8911 10208 1.067295 TGTCTGCTGGTGGAAGGAAT 58.933 50.000 0.00 0.00 0.00 3.01
8942 10239 0.969409 AGGCCTCCAGAATTTGCAGC 60.969 55.000 0.00 0.00 0.00 5.25
8993 10290 3.740513 TGCTTGTGCACAGCAGAG 58.259 55.556 28.50 21.03 45.31 3.35
9010 10307 3.469739 CCAAGCAACTTTTGGCATTCTT 58.530 40.909 0.00 0.00 38.73 2.52
9023 10320 3.059352 TCCTTTAGAGAGCCAAGCAAC 57.941 47.619 0.00 0.00 0.00 4.17
9065 10362 7.327975 TGGTACAGTACTTTGACATTATCTGG 58.672 38.462 10.62 0.00 0.00 3.86
9213 10510 8.764524 AACTGTCTACTAAGCACAAAAGATAG 57.235 34.615 0.00 0.00 0.00 2.08
9217 10514 7.948278 ACTAACTGTCTACTAAGCACAAAAG 57.052 36.000 0.00 0.00 0.00 2.27
9232 10529 6.905609 CGAAACTCTTTGGAAAACTAACTGTC 59.094 38.462 0.00 0.00 0.00 3.51
9239 10536 3.630769 GGACCGAAACTCTTTGGAAAACT 59.369 43.478 0.00 0.00 38.27 2.66
9240 10537 3.630769 AGGACCGAAACTCTTTGGAAAAC 59.369 43.478 0.00 0.00 38.27 2.43
9241 10538 3.893521 AGGACCGAAACTCTTTGGAAAA 58.106 40.909 0.00 0.00 38.27 2.29
9245 10542 2.846193 TGAAGGACCGAAACTCTTTGG 58.154 47.619 0.00 0.00 41.47 3.28
9246 10543 7.042335 AGTATATGAAGGACCGAAACTCTTTG 58.958 38.462 0.00 0.00 0.00 2.77
9247 10544 7.184067 AGTATATGAAGGACCGAAACTCTTT 57.816 36.000 0.00 0.00 0.00 2.52
9251 10548 9.756571 ATAGATAGTATATGAAGGACCGAAACT 57.243 33.333 0.00 0.00 0.00 2.66
9278 10578 7.068226 ACCAGAACTGTTTACTAAGCACAAAAT 59.932 33.333 0.00 0.00 0.00 1.82
9317 10617 8.914230 GGGAACTCCTATTGTGTAACAGCACA 62.914 46.154 0.00 0.00 42.05 4.57
9318 10618 6.596424 GGGAACTCCTATTGTGTAACAGCAC 61.596 48.000 0.00 0.00 42.05 4.40
9341 10641 3.244181 CCAAAAATGGAAGTGTCCTTGGG 60.244 47.826 4.38 0.00 45.22 4.12
9354 10654 5.473066 AGAAACTCCACATCCAAAAATGG 57.527 39.130 0.00 0.00 0.00 3.16
9356 10656 6.983906 AGAAGAAACTCCACATCCAAAAAT 57.016 33.333 0.00 0.00 0.00 1.82
9361 10661 4.347876 TCAGAAGAAGAAACTCCACATCCA 59.652 41.667 0.00 0.00 0.00 3.41
9365 10665 3.389329 AGCTCAGAAGAAGAAACTCCACA 59.611 43.478 0.00 0.00 0.00 4.17
9479 10789 5.304357 AGGTAAGCTAAAGCACAACCAAAAT 59.696 36.000 17.36 0.96 45.16 1.82
9485 10795 6.555812 AAACTAGGTAAGCTAAAGCACAAC 57.444 37.500 4.54 0.00 45.16 3.32
9549 10862 7.873699 TGGGTTCTAAATAATTCCCCAAAAA 57.126 32.000 0.00 0.00 37.70 1.94
9550 10863 7.873699 TTGGGTTCTAAATAATTCCCCAAAA 57.126 32.000 4.82 0.00 45.19 2.44
9554 10870 7.432148 AATGTTGGGTTCTAAATAATTCCCC 57.568 36.000 0.00 0.00 34.54 4.81
9587 10903 9.918630 CTCTATTTTGGGCATTCTAAATATTGG 57.081 33.333 0.00 0.00 0.00 3.16
9635 10953 8.980481 ATTTTGGGACCAAGTATTACATAGAG 57.020 34.615 3.73 0.00 37.24 2.43
9637 10955 9.847224 AGTATTTTGGGACCAAGTATTACATAG 57.153 33.333 3.73 0.00 37.24 2.23
9647 10965 3.267031 AGGGAGAGTATTTTGGGACCAAG 59.733 47.826 3.73 0.00 37.24 3.61
9773 11105 3.181478 ACTCGGGCTCGGATTTAGTTTAG 60.181 47.826 5.94 0.00 36.95 1.85
9803 11135 4.499865 GCTTCAACCCCTCAAGAAAAAGTC 60.500 45.833 0.00 0.00 0.00 3.01
9811 11143 1.986882 AAGTGCTTCAACCCCTCAAG 58.013 50.000 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.