Multiple sequence alignment - TraesCS1D01G247700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G247700 chr1D 100.000 4469 0 0 1 4469 340649831 340645363 0.000000e+00 8253.0
1 TraesCS1D01G247700 chr1D 89.153 295 29 1 294 585 31419912 31420206 9.140000e-97 364.0
2 TraesCS1D01G247700 chr1B 89.833 3895 189 93 658 4469 456255718 456251948 0.000000e+00 4807.0
3 TraesCS1D01G247700 chr1B 87.546 273 24 3 33 300 456256110 456255843 1.560000e-79 307.0
4 TraesCS1D01G247700 chr1B 89.744 78 2 5 581 652 456255840 456255763 1.320000e-15 95.3
5 TraesCS1D01G247700 chr1A 86.685 1442 77 38 2818 4186 440414018 440412619 0.000000e+00 1493.0
6 TraesCS1D01G247700 chr1A 83.514 740 56 20 683 1376 440416273 440415554 8.160000e-177 630.0
7 TraesCS1D01G247700 chr1A 80.875 800 71 37 1375 2128 440415491 440414728 5.050000e-154 555.0
8 TraesCS1D01G247700 chr1A 83.793 617 44 20 2251 2833 440414657 440414063 6.580000e-148 534.0
9 TraesCS1D01G247700 chr1A 90.690 290 16 6 4181 4469 440411504 440411225 4.220000e-100 375.0
10 TraesCS1D01G247700 chr1A 85.401 274 20 9 43 301 440416908 440416640 2.650000e-67 267.0
11 TraesCS1D01G247700 chr2D 90.785 293 24 1 299 588 628164193 628163901 5.420000e-104 388.0
12 TraesCS1D01G247700 chr2D 90.459 283 24 2 306 585 546103232 546103514 1.960000e-98 370.0
13 TraesCS1D01G247700 chr4D 91.166 283 21 3 306 585 395080970 395080689 9.070000e-102 381.0
14 TraesCS1D01G247700 chr4D 90.459 283 24 2 306 585 509132923 509132641 1.960000e-98 370.0
15 TraesCS1D01G247700 chr7D 91.852 270 22 0 306 575 40031373 40031642 1.170000e-100 377.0
16 TraesCS1D01G247700 chr7D 90.493 284 23 3 306 585 254987469 254987186 5.460000e-99 372.0
17 TraesCS1D01G247700 chr7D 90.175 285 24 3 306 587 12736306 12736023 7.060000e-98 368.0
18 TraesCS1D01G247700 chr6D 90.845 284 21 4 306 585 418691160 418690878 4.220000e-100 375.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G247700 chr1D 340645363 340649831 4468 True 8253.000000 8253 100.000000 1 4469 1 chr1D.!!$R1 4468
1 TraesCS1D01G247700 chr1B 456251948 456256110 4162 True 1736.433333 4807 89.041000 33 4469 3 chr1B.!!$R1 4436
2 TraesCS1D01G247700 chr1A 440411225 440416908 5683 True 642.333333 1493 85.159667 43 4469 6 chr1A.!!$R1 4426

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
404 421 0.103390 GAGAGAAGGTAAGCGGGCTC 59.897 60.0 0.00 0.0 0.00 4.70 F
691 1009 0.107017 CCAGCCCCCTTACTGACATG 60.107 60.0 0.00 0.0 35.90 3.21 F
905 1262 0.689623 CTCACCAGGCCTCTCTGTTT 59.310 55.0 0.00 0.0 33.14 2.83 F
2246 2773 0.030908 CTCGATCTGCTAACCCGGAC 59.969 60.0 0.73 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1557 2038 0.038166 GAAGTCCTGGCATGGTTGGA 59.962 55.0 0.00 0.0 0.00 3.53 R
1558 2039 0.038744 AGAAGTCCTGGCATGGTTGG 59.961 55.0 0.00 0.0 0.00 3.77 R
2563 3117 0.099436 AATCGGCACCGTCTACGTAC 59.901 55.0 9.23 0.0 40.74 3.67 R
3669 4346 0.475475 CATGCATCCCTAGGGCTCAA 59.525 55.0 24.42 6.1 34.68 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 2.339728 TTTTGCGAAAACATAGGCCG 57.660 45.000 0.00 0.00 0.00 6.13
41 42 1.240256 TTTGCGAAAACATAGGCCGT 58.760 45.000 0.00 0.00 0.00 5.68
102 103 1.202698 CCGGATCCAGACTTCATTCCC 60.203 57.143 13.41 0.00 0.00 3.97
103 104 1.765314 CGGATCCAGACTTCATTCCCT 59.235 52.381 13.41 0.00 0.00 4.20
104 105 2.484417 CGGATCCAGACTTCATTCCCTG 60.484 54.545 13.41 0.00 0.00 4.45
105 106 2.570135 GATCCAGACTTCATTCCCTGC 58.430 52.381 0.00 0.00 0.00 4.85
106 107 0.620556 TCCAGACTTCATTCCCTGCC 59.379 55.000 0.00 0.00 0.00 4.85
157 159 1.153369 CTGTGCGGATGGATTCGGT 60.153 57.895 0.00 0.00 0.00 4.69
197 199 6.820256 CGACAACGAAGGAAGGAAGGAACT 62.820 50.000 0.00 0.00 41.55 3.01
207 209 1.482593 AGGAAGGAACTATCACGGCTG 59.517 52.381 0.00 0.00 38.49 4.85
208 210 1.480954 GGAAGGAACTATCACGGCTGA 59.519 52.381 0.00 0.00 38.49 4.26
211 213 3.695830 AGGAACTATCACGGCTGAAAA 57.304 42.857 0.00 0.00 36.02 2.29
241 253 1.523711 CGTCCATCCAACCCATCCG 60.524 63.158 0.00 0.00 0.00 4.18
257 270 3.054503 CGACCGTCGTCCCTGTCT 61.055 66.667 12.91 0.00 35.40 3.41
263 276 2.997315 TCGTCCCTGTCTGCCTGG 60.997 66.667 0.00 0.00 0.00 4.45
283 300 3.078837 GGCCAGAAACAGAAACGGATAA 58.921 45.455 0.00 0.00 0.00 1.75
302 319 5.012561 GGATAAAGTGGATCCAGTAGCTCAT 59.987 44.000 22.61 10.92 42.26 2.90
303 320 6.211584 GGATAAAGTGGATCCAGTAGCTCATA 59.788 42.308 22.61 9.58 42.26 2.15
304 321 5.957771 AAAGTGGATCCAGTAGCTCATAA 57.042 39.130 22.61 0.00 0.00 1.90
306 323 4.290093 AGTGGATCCAGTAGCTCATAACA 58.710 43.478 21.06 0.00 0.00 2.41
307 324 4.716784 AGTGGATCCAGTAGCTCATAACAA 59.283 41.667 21.06 0.00 0.00 2.83
308 325 5.053145 GTGGATCCAGTAGCTCATAACAAG 58.947 45.833 16.81 0.00 0.00 3.16
309 326 4.716784 TGGATCCAGTAGCTCATAACAAGT 59.283 41.667 11.44 0.00 0.00 3.16
310 327 5.897250 TGGATCCAGTAGCTCATAACAAGTA 59.103 40.000 11.44 0.00 0.00 2.24
311 328 6.554982 TGGATCCAGTAGCTCATAACAAGTAT 59.445 38.462 11.44 0.00 0.00 2.12
312 329 7.728532 TGGATCCAGTAGCTCATAACAAGTATA 59.271 37.037 11.44 0.00 0.00 1.47
313 330 8.585881 GGATCCAGTAGCTCATAACAAGTATAA 58.414 37.037 6.95 0.00 0.00 0.98
323 340 9.352784 GCTCATAACAAGTATAATAGAGCTGAG 57.647 37.037 0.00 0.00 41.84 3.35
336 353 3.288484 CTGAGTCAGCGGGCTGTA 58.712 61.111 19.21 4.86 43.96 2.74
337 354 1.591703 CTGAGTCAGCGGGCTGTAA 59.408 57.895 19.21 0.00 43.96 2.41
338 355 0.459237 CTGAGTCAGCGGGCTGTAAG 60.459 60.000 19.21 9.58 43.96 2.34
339 356 0.898326 TGAGTCAGCGGGCTGTAAGA 60.898 55.000 19.21 0.00 43.96 2.10
340 357 0.246635 GAGTCAGCGGGCTGTAAGAA 59.753 55.000 19.21 0.00 43.96 2.52
341 358 0.685097 AGTCAGCGGGCTGTAAGAAA 59.315 50.000 19.21 0.00 43.96 2.52
342 359 1.279271 AGTCAGCGGGCTGTAAGAAAT 59.721 47.619 19.21 0.00 43.96 2.17
343 360 2.500098 AGTCAGCGGGCTGTAAGAAATA 59.500 45.455 19.21 0.00 43.96 1.40
344 361 3.055385 AGTCAGCGGGCTGTAAGAAATAA 60.055 43.478 19.21 0.00 43.96 1.40
345 362 3.687698 GTCAGCGGGCTGTAAGAAATAAA 59.312 43.478 19.21 0.00 43.96 1.40
346 363 3.687698 TCAGCGGGCTGTAAGAAATAAAC 59.312 43.478 19.21 0.00 43.96 2.01
347 364 3.014623 AGCGGGCTGTAAGAAATAAACC 58.985 45.455 0.00 0.00 34.07 3.27
348 365 2.750712 GCGGGCTGTAAGAAATAAACCA 59.249 45.455 0.00 0.00 34.07 3.67
349 366 3.181500 GCGGGCTGTAAGAAATAAACCAG 60.181 47.826 0.00 0.00 34.07 4.00
350 367 4.007659 CGGGCTGTAAGAAATAAACCAGT 58.992 43.478 0.00 0.00 34.07 4.00
351 368 5.180271 CGGGCTGTAAGAAATAAACCAGTA 58.820 41.667 0.00 0.00 34.07 2.74
352 369 5.820947 CGGGCTGTAAGAAATAAACCAGTAT 59.179 40.000 0.00 0.00 34.07 2.12
353 370 6.987992 CGGGCTGTAAGAAATAAACCAGTATA 59.012 38.462 0.00 0.00 34.07 1.47
354 371 7.660208 CGGGCTGTAAGAAATAAACCAGTATAT 59.340 37.037 0.00 0.00 34.07 0.86
355 372 9.350951 GGGCTGTAAGAAATAAACCAGTATATT 57.649 33.333 0.00 0.00 34.07 1.28
368 385 7.865706 AACCAGTATATTTCTGCTTAGTTGG 57.134 36.000 3.11 0.00 0.00 3.77
369 386 7.195374 ACCAGTATATTTCTGCTTAGTTGGA 57.805 36.000 0.00 0.00 0.00 3.53
370 387 7.275920 ACCAGTATATTTCTGCTTAGTTGGAG 58.724 38.462 0.00 0.00 0.00 3.86
371 388 6.708054 CCAGTATATTTCTGCTTAGTTGGAGG 59.292 42.308 3.11 0.00 0.00 4.30
372 389 7.419057 CCAGTATATTTCTGCTTAGTTGGAGGA 60.419 40.741 3.11 0.00 0.00 3.71
373 390 7.987458 CAGTATATTTCTGCTTAGTTGGAGGAA 59.013 37.037 0.00 0.00 0.00 3.36
374 391 8.548877 AGTATATTTCTGCTTAGTTGGAGGAAA 58.451 33.333 0.00 0.00 0.00 3.13
375 392 5.966742 ATTTCTGCTTAGTTGGAGGAAAC 57.033 39.130 0.00 0.00 0.00 2.78
376 393 4.431416 TTCTGCTTAGTTGGAGGAAACA 57.569 40.909 0.00 0.00 32.21 2.83
377 394 4.008074 TCTGCTTAGTTGGAGGAAACAG 57.992 45.455 0.00 0.00 32.21 3.16
378 395 3.646162 TCTGCTTAGTTGGAGGAAACAGA 59.354 43.478 0.00 0.00 32.21 3.41
379 396 4.102524 TCTGCTTAGTTGGAGGAAACAGAA 59.897 41.667 0.00 0.00 32.21 3.02
380 397 4.985538 TGCTTAGTTGGAGGAAACAGAAT 58.014 39.130 0.00 0.00 32.21 2.40
381 398 6.013725 TCTGCTTAGTTGGAGGAAACAGAATA 60.014 38.462 0.00 0.00 32.21 1.75
382 399 6.173339 TGCTTAGTTGGAGGAAACAGAATAG 58.827 40.000 0.00 0.00 32.21 1.73
383 400 6.174049 GCTTAGTTGGAGGAAACAGAATAGT 58.826 40.000 0.00 0.00 32.21 2.12
384 401 7.038587 TGCTTAGTTGGAGGAAACAGAATAGTA 60.039 37.037 0.00 0.00 32.21 1.82
385 402 7.492994 GCTTAGTTGGAGGAAACAGAATAGTAG 59.507 40.741 0.00 0.00 32.21 2.57
386 403 8.660295 TTAGTTGGAGGAAACAGAATAGTAGA 57.340 34.615 0.00 0.00 32.21 2.59
387 404 7.176589 AGTTGGAGGAAACAGAATAGTAGAG 57.823 40.000 0.00 0.00 32.21 2.43
388 405 6.954684 AGTTGGAGGAAACAGAATAGTAGAGA 59.045 38.462 0.00 0.00 32.21 3.10
389 406 7.123547 AGTTGGAGGAAACAGAATAGTAGAGAG 59.876 40.741 0.00 0.00 32.21 3.20
390 407 6.732487 TGGAGGAAACAGAATAGTAGAGAGA 58.268 40.000 0.00 0.00 0.00 3.10
391 408 7.182760 TGGAGGAAACAGAATAGTAGAGAGAA 58.817 38.462 0.00 0.00 0.00 2.87
392 409 7.340743 TGGAGGAAACAGAATAGTAGAGAGAAG 59.659 40.741 0.00 0.00 0.00 2.85
393 410 7.201875 GGAGGAAACAGAATAGTAGAGAGAAGG 60.202 44.444 0.00 0.00 0.00 3.46
394 411 7.186268 AGGAAACAGAATAGTAGAGAGAAGGT 58.814 38.462 0.00 0.00 0.00 3.50
395 412 8.337739 AGGAAACAGAATAGTAGAGAGAAGGTA 58.662 37.037 0.00 0.00 0.00 3.08
396 413 8.968969 GGAAACAGAATAGTAGAGAGAAGGTAA 58.031 37.037 0.00 0.00 0.00 2.85
398 415 7.576861 ACAGAATAGTAGAGAGAAGGTAAGC 57.423 40.000 0.00 0.00 0.00 3.09
399 416 6.261381 ACAGAATAGTAGAGAGAAGGTAAGCG 59.739 42.308 0.00 0.00 0.00 4.68
400 417 5.766174 AGAATAGTAGAGAGAAGGTAAGCGG 59.234 44.000 0.00 0.00 0.00 5.52
401 418 2.657143 AGTAGAGAGAAGGTAAGCGGG 58.343 52.381 0.00 0.00 0.00 6.13
402 419 1.067364 GTAGAGAGAAGGTAAGCGGGC 59.933 57.143 0.00 0.00 0.00 6.13
403 420 0.324830 AGAGAGAAGGTAAGCGGGCT 60.325 55.000 0.00 0.00 0.00 5.19
404 421 0.103390 GAGAGAAGGTAAGCGGGCTC 59.897 60.000 0.00 0.00 0.00 4.70
405 422 0.324830 AGAGAAGGTAAGCGGGCTCT 60.325 55.000 0.00 0.00 0.00 4.09
406 423 0.537653 GAGAAGGTAAGCGGGCTCTT 59.462 55.000 0.00 0.00 0.00 2.85
407 424 0.537653 AGAAGGTAAGCGGGCTCTTC 59.462 55.000 10.83 10.83 35.41 2.87
408 425 0.249398 GAAGGTAAGCGGGCTCTTCA 59.751 55.000 12.90 0.00 35.31 3.02
409 426 0.912486 AAGGTAAGCGGGCTCTTCAT 59.088 50.000 0.00 0.00 0.00 2.57
410 427 1.789523 AGGTAAGCGGGCTCTTCATA 58.210 50.000 0.00 0.00 0.00 2.15
411 428 2.116238 AGGTAAGCGGGCTCTTCATAA 58.884 47.619 0.00 0.00 0.00 1.90
412 429 2.504175 AGGTAAGCGGGCTCTTCATAAA 59.496 45.455 0.00 0.00 0.00 1.40
413 430 3.054655 AGGTAAGCGGGCTCTTCATAAAA 60.055 43.478 0.00 0.00 0.00 1.52
414 431 3.692593 GGTAAGCGGGCTCTTCATAAAAA 59.307 43.478 0.00 0.00 0.00 1.94
415 432 4.201920 GGTAAGCGGGCTCTTCATAAAAAG 60.202 45.833 0.00 0.00 0.00 2.27
416 433 3.350219 AGCGGGCTCTTCATAAAAAGA 57.650 42.857 0.00 0.00 34.22 2.52
417 434 3.010420 AGCGGGCTCTTCATAAAAAGAC 58.990 45.455 0.00 0.00 32.03 3.01
418 435 2.747446 GCGGGCTCTTCATAAAAAGACA 59.253 45.455 0.00 0.00 32.03 3.41
419 436 3.181506 GCGGGCTCTTCATAAAAAGACAG 60.182 47.826 0.00 0.00 32.03 3.51
420 437 3.181506 CGGGCTCTTCATAAAAAGACAGC 60.182 47.826 0.00 0.00 32.03 4.40
421 438 4.013050 GGGCTCTTCATAAAAAGACAGCT 58.987 43.478 0.00 0.00 32.03 4.24
422 439 4.095632 GGGCTCTTCATAAAAAGACAGCTC 59.904 45.833 0.00 0.00 32.03 4.09
423 440 4.940654 GGCTCTTCATAAAAAGACAGCTCT 59.059 41.667 0.00 0.00 32.03 4.09
424 441 6.109359 GGCTCTTCATAAAAAGACAGCTCTA 58.891 40.000 0.00 0.00 32.03 2.43
425 442 6.257630 GGCTCTTCATAAAAAGACAGCTCTAG 59.742 42.308 0.00 0.00 32.03 2.43
426 443 6.238076 GCTCTTCATAAAAAGACAGCTCTAGC 60.238 42.308 0.00 0.00 34.87 3.42
427 444 5.807520 TCTTCATAAAAAGACAGCTCTAGCG 59.192 40.000 0.00 0.00 36.92 4.26
428 445 7.607627 TCTTCATAAAAAGACAGCTCTAGCGC 61.608 42.308 0.00 0.00 36.92 5.92
442 459 2.881352 GCGCGTGCTCCTAGACAC 60.881 66.667 15.02 0.00 38.39 3.67
443 460 2.878429 CGCGTGCTCCTAGACACT 59.122 61.111 0.00 0.00 34.58 3.55
444 461 1.213013 CGCGTGCTCCTAGACACTT 59.787 57.895 0.00 0.00 34.58 3.16
445 462 0.388649 CGCGTGCTCCTAGACACTTT 60.389 55.000 0.00 0.00 34.58 2.66
446 463 1.071605 GCGTGCTCCTAGACACTTTG 58.928 55.000 0.00 0.00 34.58 2.77
447 464 1.605712 GCGTGCTCCTAGACACTTTGT 60.606 52.381 0.00 0.00 34.58 2.83
448 465 2.061773 CGTGCTCCTAGACACTTTGTG 58.938 52.381 0.00 0.00 39.75 3.33
449 466 2.288213 CGTGCTCCTAGACACTTTGTGA 60.288 50.000 4.61 0.00 36.96 3.58
450 467 3.321497 GTGCTCCTAGACACTTTGTGAG 58.679 50.000 4.61 0.00 36.96 3.51
451 468 3.005897 GTGCTCCTAGACACTTTGTGAGA 59.994 47.826 4.61 0.00 36.96 3.27
452 469 3.641436 TGCTCCTAGACACTTTGTGAGAA 59.359 43.478 4.61 0.00 36.96 2.87
453 470 4.284490 TGCTCCTAGACACTTTGTGAGAAT 59.716 41.667 4.61 0.00 36.96 2.40
454 471 4.629200 GCTCCTAGACACTTTGTGAGAATG 59.371 45.833 4.61 0.00 36.96 2.67
455 472 5.567623 GCTCCTAGACACTTTGTGAGAATGA 60.568 44.000 4.61 0.00 36.96 2.57
456 473 6.419484 TCCTAGACACTTTGTGAGAATGAA 57.581 37.500 4.61 0.00 36.96 2.57
457 474 6.826668 TCCTAGACACTTTGTGAGAATGAAA 58.173 36.000 4.61 0.00 36.96 2.69
458 475 6.931281 TCCTAGACACTTTGTGAGAATGAAAG 59.069 38.462 4.61 0.00 36.96 2.62
459 476 6.148480 CCTAGACACTTTGTGAGAATGAAAGG 59.852 42.308 4.61 0.00 36.96 3.11
460 477 5.440610 AGACACTTTGTGAGAATGAAAGGT 58.559 37.500 4.61 0.00 36.96 3.50
461 478 6.591935 AGACACTTTGTGAGAATGAAAGGTA 58.408 36.000 4.61 0.00 36.96 3.08
462 479 6.708054 AGACACTTTGTGAGAATGAAAGGTAG 59.292 38.462 4.61 0.00 36.96 3.18
463 480 5.765182 ACACTTTGTGAGAATGAAAGGTAGG 59.235 40.000 4.61 0.00 36.96 3.18
464 481 4.762251 ACTTTGTGAGAATGAAAGGTAGGC 59.238 41.667 0.00 0.00 0.00 3.93
465 482 3.350219 TGTGAGAATGAAAGGTAGGCC 57.650 47.619 0.00 0.00 0.00 5.19
466 483 2.642311 TGTGAGAATGAAAGGTAGGCCA 59.358 45.455 5.01 0.00 37.19 5.36
467 484 3.010420 GTGAGAATGAAAGGTAGGCCAC 58.990 50.000 5.01 0.31 37.19 5.01
468 485 2.642311 TGAGAATGAAAGGTAGGCCACA 59.358 45.455 5.01 0.00 37.19 4.17
469 486 3.266772 TGAGAATGAAAGGTAGGCCACAT 59.733 43.478 5.01 0.00 37.19 3.21
470 487 4.473196 TGAGAATGAAAGGTAGGCCACATA 59.527 41.667 5.01 0.00 37.19 2.29
471 488 5.045213 TGAGAATGAAAGGTAGGCCACATAA 60.045 40.000 5.01 0.00 37.19 1.90
472 489 6.018433 AGAATGAAAGGTAGGCCACATAAT 57.982 37.500 5.01 0.00 37.19 1.28
473 490 7.147391 TGAGAATGAAAGGTAGGCCACATAATA 60.147 37.037 5.01 0.00 37.19 0.98
474 491 7.582719 AGAATGAAAGGTAGGCCACATAATAA 58.417 34.615 5.01 0.00 37.19 1.40
475 492 7.502561 AGAATGAAAGGTAGGCCACATAATAAC 59.497 37.037 5.01 0.00 37.19 1.89
476 493 6.068461 TGAAAGGTAGGCCACATAATAACA 57.932 37.500 5.01 0.00 37.19 2.41
477 494 6.486056 TGAAAGGTAGGCCACATAATAACAA 58.514 36.000 5.01 0.00 37.19 2.83
478 495 6.948886 TGAAAGGTAGGCCACATAATAACAAA 59.051 34.615 5.01 0.00 37.19 2.83
479 496 7.122055 TGAAAGGTAGGCCACATAATAACAAAG 59.878 37.037 5.01 0.00 37.19 2.77
480 497 4.887655 AGGTAGGCCACATAATAACAAAGC 59.112 41.667 5.01 0.00 37.19 3.51
481 498 4.642885 GGTAGGCCACATAATAACAAAGCA 59.357 41.667 5.01 0.00 34.09 3.91
482 499 4.989279 AGGCCACATAATAACAAAGCAG 57.011 40.909 5.01 0.00 0.00 4.24
483 500 4.344104 AGGCCACATAATAACAAAGCAGT 58.656 39.130 5.01 0.00 0.00 4.40
484 501 5.505780 AGGCCACATAATAACAAAGCAGTA 58.494 37.500 5.01 0.00 0.00 2.74
485 502 5.357032 AGGCCACATAATAACAAAGCAGTAC 59.643 40.000 5.01 0.00 0.00 2.73
486 503 5.124776 GGCCACATAATAACAAAGCAGTACA 59.875 40.000 0.00 0.00 0.00 2.90
487 504 6.027749 GCCACATAATAACAAAGCAGTACAC 58.972 40.000 0.00 0.00 0.00 2.90
488 505 6.128007 GCCACATAATAACAAAGCAGTACACT 60.128 38.462 0.00 0.00 0.00 3.55
489 506 7.574967 GCCACATAATAACAAAGCAGTACACTT 60.575 37.037 0.00 0.00 0.00 3.16
490 507 8.296713 CCACATAATAACAAAGCAGTACACTTT 58.703 33.333 7.80 7.80 37.85 2.66
491 508 9.677567 CACATAATAACAAAGCAGTACACTTTT 57.322 29.630 10.28 2.30 35.19 2.27
528 545 4.670896 ACATGTTGGCTATAAAATGGGC 57.329 40.909 0.00 0.00 36.83 5.36
529 546 4.289245 ACATGTTGGCTATAAAATGGGCT 58.711 39.130 0.00 0.00 37.22 5.19
530 547 4.099881 ACATGTTGGCTATAAAATGGGCTG 59.900 41.667 0.00 0.00 37.22 4.85
531 548 3.707316 TGTTGGCTATAAAATGGGCTGT 58.293 40.909 0.00 0.00 37.22 4.40
532 549 4.861196 TGTTGGCTATAAAATGGGCTGTA 58.139 39.130 0.00 0.00 37.22 2.74
533 550 5.454062 TGTTGGCTATAAAATGGGCTGTAT 58.546 37.500 0.00 0.00 37.22 2.29
534 551 6.606069 TGTTGGCTATAAAATGGGCTGTATA 58.394 36.000 0.00 0.00 37.22 1.47
535 552 7.237982 TGTTGGCTATAAAATGGGCTGTATAT 58.762 34.615 0.00 0.00 37.22 0.86
536 553 8.387039 TGTTGGCTATAAAATGGGCTGTATATA 58.613 33.333 0.00 0.00 37.22 0.86
537 554 9.238368 GTTGGCTATAAAATGGGCTGTATATAA 57.762 33.333 0.00 0.00 37.22 0.98
538 555 8.801882 TGGCTATAAAATGGGCTGTATATAAC 57.198 34.615 0.00 0.00 37.22 1.89
539 556 8.387039 TGGCTATAAAATGGGCTGTATATAACA 58.613 33.333 0.00 0.00 37.22 2.41
540 557 9.408648 GGCTATAAAATGGGCTGTATATAACAT 57.591 33.333 0.00 0.00 37.50 2.71
543 560 5.982890 AAATGGGCTGTATATAACATGGC 57.017 39.130 0.00 0.00 37.50 4.40
544 561 4.656100 ATGGGCTGTATATAACATGGCA 57.344 40.909 0.00 0.00 37.50 4.92
545 562 3.750371 TGGGCTGTATATAACATGGCAC 58.250 45.455 0.00 0.00 37.50 5.01
546 563 3.394274 TGGGCTGTATATAACATGGCACT 59.606 43.478 0.00 0.00 34.56 4.40
547 564 3.753272 GGGCTGTATATAACATGGCACTG 59.247 47.826 0.00 0.00 37.50 3.66
548 565 4.504864 GGGCTGTATATAACATGGCACTGA 60.505 45.833 0.00 0.00 37.50 3.41
549 566 4.452455 GGCTGTATATAACATGGCACTGAC 59.548 45.833 0.00 0.00 37.50 3.51
550 567 5.300752 GCTGTATATAACATGGCACTGACT 58.699 41.667 0.00 0.00 37.50 3.41
551 568 5.760253 GCTGTATATAACATGGCACTGACTT 59.240 40.000 0.00 0.00 37.50 3.01
552 569 6.929049 GCTGTATATAACATGGCACTGACTTA 59.071 38.462 0.00 0.00 37.50 2.24
553 570 7.604164 GCTGTATATAACATGGCACTGACTTAT 59.396 37.037 0.00 0.00 37.50 1.73
556 573 9.088512 GTATATAACATGGCACTGACTTATAGC 57.911 37.037 0.00 0.00 0.00 2.97
557 574 3.199880 ACATGGCACTGACTTATAGCC 57.800 47.619 0.00 0.00 45.41 3.93
560 577 2.990066 GGCACTGACTTATAGCCAGT 57.010 50.000 0.00 0.00 39.59 4.00
562 579 3.983741 GGCACTGACTTATAGCCAGTAG 58.016 50.000 0.00 0.00 36.79 2.57
563 580 3.385577 GCACTGACTTATAGCCAGTAGC 58.614 50.000 0.00 0.00 36.79 3.58
577 594 4.522722 CCAGTAGCTGGCTATACTAACC 57.477 50.000 5.58 0.00 45.13 2.85
578 595 3.895656 CCAGTAGCTGGCTATACTAACCA 59.104 47.826 5.58 0.00 45.13 3.67
579 596 4.528596 CCAGTAGCTGGCTATACTAACCAT 59.471 45.833 5.58 0.00 45.13 3.55
580 597 5.473931 CAGTAGCTGGCTATACTAACCATG 58.526 45.833 5.58 0.00 31.10 3.66
581 598 3.409026 AGCTGGCTATACTAACCATGC 57.591 47.619 0.00 0.00 31.79 4.06
582 599 2.975489 AGCTGGCTATACTAACCATGCT 59.025 45.455 0.00 0.00 34.92 3.79
583 600 3.007398 AGCTGGCTATACTAACCATGCTC 59.993 47.826 0.00 0.00 34.80 4.26
584 601 3.007398 GCTGGCTATACTAACCATGCTCT 59.993 47.826 0.00 0.00 31.79 4.09
585 602 4.815269 CTGGCTATACTAACCATGCTCTC 58.185 47.826 0.00 0.00 31.79 3.20
607 628 2.125952 TCACCGTGATCGCAGCTG 60.126 61.111 10.11 10.11 35.54 4.24
608 629 2.433145 CACCGTGATCGCAGCTGT 60.433 61.111 16.64 0.00 35.54 4.40
652 673 5.063880 TGGAGCAGAGTTACTTTTCCTTTC 58.936 41.667 0.00 0.00 32.74 2.62
653 674 4.152580 GGAGCAGAGTTACTTTTCCTTTCG 59.847 45.833 0.00 0.00 0.00 3.46
654 675 4.065789 AGCAGAGTTACTTTTCCTTTCGG 58.934 43.478 0.00 0.00 0.00 4.30
655 676 3.188667 GCAGAGTTACTTTTCCTTTCGGG 59.811 47.826 0.00 0.00 0.00 5.14
670 988 7.916914 TCCTTTCGGGTTAGAGAAATAAAAG 57.083 36.000 0.00 0.00 36.02 2.27
672 990 6.404403 CCTTTCGGGTTAGAGAAATAAAAGGC 60.404 42.308 0.00 0.00 35.35 4.35
674 992 4.019141 TCGGGTTAGAGAAATAAAAGGCCA 60.019 41.667 5.01 0.00 0.00 5.36
675 993 4.335594 CGGGTTAGAGAAATAAAAGGCCAG 59.664 45.833 5.01 0.00 0.00 4.85
677 995 4.098044 GGTTAGAGAAATAAAAGGCCAGCC 59.902 45.833 5.01 0.00 0.00 4.85
679 997 1.757118 GAGAAATAAAAGGCCAGCCCC 59.243 52.381 5.01 0.00 36.58 5.80
680 998 0.830648 GAAATAAAAGGCCAGCCCCC 59.169 55.000 5.01 0.00 36.58 5.40
681 999 0.417437 AAATAAAAGGCCAGCCCCCT 59.583 50.000 5.01 0.00 36.58 4.79
682 1000 0.417437 AATAAAAGGCCAGCCCCCTT 59.583 50.000 5.01 0.00 44.35 3.95
683 1001 1.314895 ATAAAAGGCCAGCCCCCTTA 58.685 50.000 5.01 1.31 41.70 2.69
684 1002 0.333652 TAAAAGGCCAGCCCCCTTAC 59.666 55.000 5.01 0.00 41.70 2.34
685 1003 1.443729 AAAAGGCCAGCCCCCTTACT 61.444 55.000 5.01 0.00 41.70 2.24
686 1004 2.155197 AAAGGCCAGCCCCCTTACTG 62.155 60.000 5.01 0.00 41.70 2.74
687 1005 3.015145 GGCCAGCCCCCTTACTGA 61.015 66.667 0.00 0.00 35.90 3.41
688 1006 2.272471 GCCAGCCCCCTTACTGAC 59.728 66.667 0.00 0.00 35.90 3.51
690 1008 1.926426 GCCAGCCCCCTTACTGACAT 61.926 60.000 0.00 0.00 35.90 3.06
691 1009 0.107017 CCAGCCCCCTTACTGACATG 60.107 60.000 0.00 0.00 35.90 3.21
692 1010 0.749454 CAGCCCCCTTACTGACATGC 60.749 60.000 0.00 0.00 35.90 4.06
710 1028 3.004090 GGGCCCCCTATGTTTCGT 58.996 61.111 12.23 0.00 0.00 3.85
712 1030 1.301954 GGCCCCCTATGTTTCGTGT 59.698 57.895 0.00 0.00 0.00 4.49
905 1262 0.689623 CTCACCAGGCCTCTCTGTTT 59.310 55.000 0.00 0.00 33.14 2.83
912 1269 1.377856 GCCTCTCTGTTTCCCTGCC 60.378 63.158 0.00 0.00 0.00 4.85
913 1270 1.078848 CCTCTCTGTTTCCCTGCCG 60.079 63.158 0.00 0.00 0.00 5.69
915 1272 2.747855 CTCTGTTTCCCTGCCGCC 60.748 66.667 0.00 0.00 0.00 6.13
972 1333 3.494336 CTCCGGCAAGCAAGCTCG 61.494 66.667 0.00 0.00 34.17 5.03
989 1350 3.741476 GGCCCGCAACAGCTCAAG 61.741 66.667 0.00 0.00 0.00 3.02
993 1355 1.004560 CCGCAACAGCTCAAGGAGA 60.005 57.895 0.00 0.00 0.00 3.71
1152 1514 4.475135 GTGAGCCCTCCGCCCTTC 62.475 72.222 0.00 0.00 38.78 3.46
1156 1518 4.570874 GCCCTCCGCCCTTCCATC 62.571 72.222 0.00 0.00 0.00 3.51
1157 1519 3.878667 CCCTCCGCCCTTCCATCC 61.879 72.222 0.00 0.00 0.00 3.51
1161 1523 1.926426 CTCCGCCCTTCCATCCCTTT 61.926 60.000 0.00 0.00 0.00 3.11
1163 1525 1.302949 CGCCCTTCCATCCCTTTCA 59.697 57.895 0.00 0.00 0.00 2.69
1169 1531 4.464947 CCCTTCCATCCCTTTCATACTTC 58.535 47.826 0.00 0.00 0.00 3.01
1172 1534 4.778213 TCCATCCCTTTCATACTTCCTG 57.222 45.455 0.00 0.00 0.00 3.86
1174 1536 3.117738 CCATCCCTTTCATACTTCCTGCT 60.118 47.826 0.00 0.00 0.00 4.24
1176 1538 4.657814 TCCCTTTCATACTTCCTGCTTT 57.342 40.909 0.00 0.00 0.00 3.51
1181 1543 5.376854 TTTCATACTTCCTGCTTTGCTTC 57.623 39.130 0.00 0.00 0.00 3.86
1182 1544 3.347216 TCATACTTCCTGCTTTGCTTCC 58.653 45.455 0.00 0.00 0.00 3.46
1198 1568 5.372343 TGCTTCCTATCTTGCCATTTCTA 57.628 39.130 0.00 0.00 0.00 2.10
1232 1611 3.702555 GTGTCGTGTGTGGCGAGC 61.703 66.667 0.00 0.00 39.14 5.03
1248 1629 3.331319 GCTACCGAGCTCGATCGA 58.669 61.111 36.59 18.32 45.98 3.59
1287 1668 5.233988 AGTTAGTTAGCTCTGCTTCTGTTG 58.766 41.667 0.00 0.00 40.44 3.33
1326 1711 0.760945 GCTGGCTAGGGGCTTCTCTA 60.761 60.000 0.00 0.00 41.46 2.43
1438 1897 3.549827 GCACACACGACCAAATCAAATCA 60.550 43.478 0.00 0.00 0.00 2.57
1518 1987 1.531578 GGAACAGCCGAAGAAGACAAC 59.468 52.381 0.00 0.00 0.00 3.32
1557 2038 0.243907 CCATGTCGTTCGTGGTCTCT 59.756 55.000 11.45 0.00 45.46 3.10
1558 2039 1.618861 CATGTCGTTCGTGGTCTCTC 58.381 55.000 0.00 0.00 0.00 3.20
1570 2051 0.393537 GGTCTCTCCAACCATGCCAG 60.394 60.000 0.00 0.00 36.75 4.85
1588 2069 4.220821 TGCCAGGACTTCTTCAGTTAGTAG 59.779 45.833 0.00 0.00 35.01 2.57
1589 2070 4.221041 GCCAGGACTTCTTCAGTTAGTAGT 59.779 45.833 0.00 0.00 35.01 2.73
1590 2071 5.715070 CCAGGACTTCTTCAGTTAGTAGTG 58.285 45.833 0.00 0.00 35.01 2.74
1624 2105 4.827284 CCTTGCCCCACTAATAATTACCTG 59.173 45.833 0.00 0.00 0.00 4.00
1644 2125 0.585357 CTTAGCATCCTCATGTGCGC 59.415 55.000 0.00 0.00 45.69 6.09
1669 2150 3.181520 GGCGCTATGTGTTGTTCTTACAG 60.182 47.826 7.64 0.00 35.28 2.74
1671 2152 3.181520 CGCTATGTGTTGTTCTTACAGCC 60.182 47.826 0.00 0.00 34.89 4.85
1672 2153 4.003648 GCTATGTGTTGTTCTTACAGCCT 58.996 43.478 0.00 0.00 34.89 4.58
1673 2154 4.455877 GCTATGTGTTGTTCTTACAGCCTT 59.544 41.667 0.00 0.00 34.89 4.35
1674 2155 5.642063 GCTATGTGTTGTTCTTACAGCCTTA 59.358 40.000 0.00 0.00 34.89 2.69
1675 2156 5.941948 ATGTGTTGTTCTTACAGCCTTAC 57.058 39.130 0.00 0.00 34.89 2.34
1676 2157 4.771903 TGTGTTGTTCTTACAGCCTTACA 58.228 39.130 0.00 0.00 34.89 2.41
1677 2158 4.814234 TGTGTTGTTCTTACAGCCTTACAG 59.186 41.667 0.00 0.00 34.89 2.74
1679 2160 3.695830 TGTTCTTACAGCCTTACAGGG 57.304 47.619 0.00 0.00 35.37 4.45
1699 2184 6.653740 ACAGGGCAGTGAATTAGTTAGTTAAC 59.346 38.462 0.00 0.00 36.46 2.01
1703 2192 6.403309 GGCAGTGAATTAGTTAGTTAACTGGC 60.403 42.308 18.56 17.07 45.67 4.85
1804 2299 2.953640 TTTCGTTTACGCGCAGAATT 57.046 40.000 5.73 0.00 39.60 2.17
1828 2330 3.801307 TGATGGATAAGCATCAGCCAT 57.199 42.857 2.09 2.09 43.56 4.40
1911 2415 4.261825 CGGTGCATTTAGAGGAAACCAAAA 60.262 41.667 0.00 0.00 0.00 2.44
2101 2612 2.843401 TTCCACCGATTCCGAAAGAA 57.157 45.000 0.00 0.00 39.32 2.52
2105 2616 2.477863 CCACCGATTCCGAAAGAATTGC 60.478 50.000 0.00 0.00 45.52 3.56
2246 2773 0.030908 CTCGATCTGCTAACCCGGAC 59.969 60.000 0.73 0.00 0.00 4.79
2279 2812 2.027625 GGAAAGGGTCAGACGTGCG 61.028 63.158 0.00 0.00 0.00 5.34
2382 2918 4.484872 GCAAGGTACGCCCTCCCC 62.485 72.222 0.00 0.00 45.47 4.81
2413 2949 1.361668 CGCACACATGGCTGTAGACC 61.362 60.000 0.00 0.00 33.14 3.85
2444 2980 2.187946 CCGCACATGTCCCTCTCC 59.812 66.667 0.00 0.00 0.00 3.71
2448 2984 1.428869 GCACATGTCCCTCTCCCTAT 58.571 55.000 0.00 0.00 0.00 2.57
2449 2985 1.346068 GCACATGTCCCTCTCCCTATC 59.654 57.143 0.00 0.00 0.00 2.08
2450 2986 2.969628 CACATGTCCCTCTCCCTATCT 58.030 52.381 0.00 0.00 0.00 1.98
2451 2987 2.896685 CACATGTCCCTCTCCCTATCTC 59.103 54.545 0.00 0.00 0.00 2.75
2452 2988 2.794760 ACATGTCCCTCTCCCTATCTCT 59.205 50.000 0.00 0.00 0.00 3.10
2453 2989 3.181423 ACATGTCCCTCTCCCTATCTCTC 60.181 52.174 0.00 0.00 0.00 3.20
2454 2990 1.422024 TGTCCCTCTCCCTATCTCTCG 59.578 57.143 0.00 0.00 0.00 4.04
2455 2991 0.402504 TCCCTCTCCCTATCTCTCGC 59.597 60.000 0.00 0.00 0.00 5.03
2456 2992 0.610785 CCCTCTCCCTATCTCTCGCC 60.611 65.000 0.00 0.00 0.00 5.54
2457 2993 0.610785 CCTCTCCCTATCTCTCGCCC 60.611 65.000 0.00 0.00 0.00 6.13
2458 2994 0.404040 CTCTCCCTATCTCTCGCCCT 59.596 60.000 0.00 0.00 0.00 5.19
2459 2995 0.854218 TCTCCCTATCTCTCGCCCTT 59.146 55.000 0.00 0.00 0.00 3.95
2460 2996 0.965439 CTCCCTATCTCTCGCCCTTG 59.035 60.000 0.00 0.00 0.00 3.61
2461 2997 0.470080 TCCCTATCTCTCGCCCTTGG 60.470 60.000 0.00 0.00 0.00 3.61
2462 2998 1.369321 CCTATCTCTCGCCCTTGGC 59.631 63.158 0.00 0.00 46.75 4.52
2513 3049 4.259356 ACTTTACCGCTCCAAAGATTACC 58.741 43.478 7.52 0.00 35.70 2.85
2524 3066 6.571731 GCTCCAAAGATTACCACTTTTAACCC 60.572 42.308 0.00 0.00 35.74 4.11
2525 3067 5.776208 TCCAAAGATTACCACTTTTAACCCC 59.224 40.000 0.00 0.00 35.74 4.95
2526 3068 5.046878 CCAAAGATTACCACTTTTAACCCCC 60.047 44.000 0.00 0.00 35.74 5.40
2527 3069 3.959293 AGATTACCACTTTTAACCCCCG 58.041 45.455 0.00 0.00 0.00 5.73
2561 3115 3.581024 ATCAGTTTAGTTACCGTCGCA 57.419 42.857 0.00 0.00 0.00 5.10
2563 3117 1.384409 CAGTTTAGTTACCGTCGCACG 59.616 52.381 2.27 2.27 42.11 5.34
2579 3133 2.276868 CGTACGTAGACGGTGCCG 60.277 66.667 7.22 9.29 44.95 5.69
2587 3141 2.600792 CGTAGACGGTGCCGATTAGTAC 60.601 54.545 18.16 9.31 42.83 2.73
2589 3143 2.097825 AGACGGTGCCGATTAGTACTT 58.902 47.619 18.16 0.00 42.83 2.24
2599 3153 4.433615 CCGATTAGTACTTGCACAGTCAT 58.566 43.478 0.00 0.05 36.88 3.06
2600 3154 4.870426 CCGATTAGTACTTGCACAGTCATT 59.130 41.667 0.00 0.00 36.88 2.57
2601 3155 5.220472 CCGATTAGTACTTGCACAGTCATTG 60.220 44.000 0.00 0.60 36.88 2.82
2623 3177 2.422479 CTCACCCTGCATGATTGACAAG 59.578 50.000 0.00 0.00 0.00 3.16
2651 3205 9.596308 AATCAATTGTTTTTAACTAGTAGGGGT 57.404 29.630 5.13 0.00 0.00 4.95
2653 3207 9.729281 TCAATTGTTTTTAACTAGTAGGGGTAG 57.271 33.333 5.13 0.00 0.00 3.18
2976 3602 7.552687 CCATGAGTTCAGTAGCAACCTTAATTA 59.447 37.037 0.00 0.00 0.00 1.40
2977 3603 7.900782 TGAGTTCAGTAGCAACCTTAATTAC 57.099 36.000 0.00 0.00 0.00 1.89
2978 3604 7.676947 TGAGTTCAGTAGCAACCTTAATTACT 58.323 34.615 0.00 0.00 0.00 2.24
3030 3659 2.442413 TGGCCACCGGATTTTTCTTAG 58.558 47.619 9.46 0.00 0.00 2.18
3459 4129 2.744709 GGCGCGCCCACTAAAAGA 60.745 61.111 39.89 0.00 0.00 2.52
3481 4151 2.216898 GCGCCTGAAAATCTGCTCTAT 58.783 47.619 0.00 0.00 0.00 1.98
3529 4200 3.306818 GCCGACTAATTAAGTAGCTCCG 58.693 50.000 9.78 10.40 39.07 4.63
3556 4229 0.776810 TGCTGGGTTCTCAAATGGGA 59.223 50.000 0.00 0.00 0.00 4.37
3668 4345 4.881850 CCCAGGGCTAGTTAAATGTGTAAG 59.118 45.833 0.00 0.00 0.00 2.34
3669 4346 5.497474 CCAGGGCTAGTTAAATGTGTAAGT 58.503 41.667 0.00 0.00 0.00 2.24
3687 4364 0.475906 GTTGAGCCCTAGGGATGCAT 59.524 55.000 33.21 10.78 37.50 3.96
3688 4365 0.475475 TTGAGCCCTAGGGATGCATG 59.525 55.000 33.21 2.93 37.50 4.06
3689 4366 1.303155 GAGCCCTAGGGATGCATGC 60.303 63.158 33.21 11.82 37.50 4.06
3690 4367 2.060567 GAGCCCTAGGGATGCATGCA 62.061 60.000 33.21 25.04 37.50 3.96
3765 4451 7.912250 CACGTAGTATTTTAGGGTACTACTGTG 59.088 40.741 19.80 19.80 45.56 3.66
3766 4452 6.914757 CGTAGTATTTTAGGGTACTACTGTGC 59.085 42.308 16.22 0.00 45.56 4.57
3767 4453 6.231258 AGTATTTTAGGGTACTACTGTGCC 57.769 41.667 0.00 0.00 46.36 5.01
3768 4454 5.962641 AGTATTTTAGGGTACTACTGTGCCT 59.037 40.000 3.57 0.00 46.31 4.75
3790 4476 1.229145 CCTGCCCCCACAATGGAAA 60.229 57.895 0.00 0.00 40.96 3.13
3928 4622 1.833630 ACTGCTAGTGCTGCTCCATTA 59.166 47.619 0.00 0.00 41.07 1.90
3939 4633 6.830324 AGTGCTGCTCCATTATTAAAGAATGA 59.170 34.615 12.71 2.32 36.57 2.57
3968 4662 5.942236 AGTAATGATTGATGTCTTGTGCTGT 59.058 36.000 0.00 0.00 0.00 4.40
3995 4691 0.454452 GGCTCATGCGTTCCGTTTTC 60.454 55.000 0.00 0.00 40.82 2.29
4026 4722 2.044053 ATCCCGTTCCCGTCCGTA 60.044 61.111 0.00 0.00 0.00 4.02
4039 4735 2.604855 CCGTCCGTAGAATGGAATCTCG 60.605 54.545 0.00 0.00 34.53 4.04
4042 4738 1.687123 CCGTAGAATGGAATCTCGGGT 59.313 52.381 0.00 0.00 36.92 5.28
4043 4739 2.102588 CCGTAGAATGGAATCTCGGGTT 59.897 50.000 0.00 0.00 36.92 4.11
4084 4795 3.885521 GGAATCTGCTGCAGCGCC 61.886 66.667 32.11 22.69 45.83 6.53
4085 4796 4.233635 GAATCTGCTGCAGCGCCG 62.234 66.667 32.11 22.48 45.83 6.46
4127 4838 2.715624 GATTGGCGGGATTGCGTC 59.284 61.111 0.00 0.00 35.06 5.19
4132 4843 4.778143 GCGGGATTGCGTCTGGGT 62.778 66.667 0.00 0.00 0.00 4.51
4305 6145 1.701847 GGAGGCATGGATGGATGTACT 59.298 52.381 0.00 0.00 0.00 2.73
4368 6208 0.524414 GCTGTGAAGTGCATGCATGA 59.476 50.000 30.64 12.48 0.00 3.07
4369 6209 1.467543 GCTGTGAAGTGCATGCATGAG 60.468 52.381 30.64 16.08 0.00 2.90
4370 6210 2.081462 CTGTGAAGTGCATGCATGAGA 58.919 47.619 30.64 12.73 0.00 3.27
4371 6211 2.683362 CTGTGAAGTGCATGCATGAGAT 59.317 45.455 30.64 12.30 0.00 2.75
4372 6212 2.422127 TGTGAAGTGCATGCATGAGATG 59.578 45.455 30.64 5.23 0.00 2.90
4373 6213 2.681344 GTGAAGTGCATGCATGAGATGA 59.319 45.455 30.64 5.79 0.00 2.92
4430 6270 3.858868 GACCTTCTCCGTGCGTGCA 62.859 63.158 0.00 0.00 0.00 4.57
4431 6271 2.434884 CCTTCTCCGTGCGTGCAT 60.435 61.111 0.00 0.00 0.00 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.034812 ACGGCCTATGTTTTCGCAAAAA 59.965 40.909 0.00 0.00 31.13 1.94
21 22 1.609555 ACGGCCTATGTTTTCGCAAAA 59.390 42.857 0.00 0.00 0.00 2.44
22 23 1.240256 ACGGCCTATGTTTTCGCAAA 58.760 45.000 0.00 0.00 0.00 3.68
23 24 2.004017 CTACGGCCTATGTTTTCGCAA 58.996 47.619 0.00 0.00 0.00 4.85
24 25 1.647346 CTACGGCCTATGTTTTCGCA 58.353 50.000 0.00 0.00 0.00 5.10
25 26 0.935196 CCTACGGCCTATGTTTTCGC 59.065 55.000 0.00 0.00 0.00 4.70
26 27 2.589798 TCCTACGGCCTATGTTTTCG 57.410 50.000 0.00 0.00 0.00 3.46
27 28 5.608449 ACTAATCCTACGGCCTATGTTTTC 58.392 41.667 0.00 0.00 0.00 2.29
28 29 5.625568 ACTAATCCTACGGCCTATGTTTT 57.374 39.130 0.00 0.00 0.00 2.43
29 30 5.365619 CAACTAATCCTACGGCCTATGTTT 58.634 41.667 0.00 0.00 0.00 2.83
30 31 4.742743 GCAACTAATCCTACGGCCTATGTT 60.743 45.833 0.00 0.00 0.00 2.71
31 32 3.244112 GCAACTAATCCTACGGCCTATGT 60.244 47.826 0.00 0.00 0.00 2.29
40 41 0.179092 ACGGGCGCAACTAATCCTAC 60.179 55.000 10.83 0.00 0.00 3.18
41 42 0.103572 GACGGGCGCAACTAATCCTA 59.896 55.000 10.83 0.00 0.00 2.94
102 103 0.399454 ATCATCGGAATCCCAGGCAG 59.601 55.000 0.00 0.00 0.00 4.85
103 104 0.397941 GATCATCGGAATCCCAGGCA 59.602 55.000 0.00 0.00 0.00 4.75
104 105 0.322008 GGATCATCGGAATCCCAGGC 60.322 60.000 0.00 0.00 0.00 4.85
105 106 1.059098 TGGATCATCGGAATCCCAGG 58.941 55.000 6.31 0.00 33.65 4.45
106 107 2.936919 TTGGATCATCGGAATCCCAG 57.063 50.000 6.31 0.00 33.65 4.45
157 159 1.952133 CGAGCGAACGGTTCCAACA 60.952 57.895 14.83 0.00 0.00 3.33
184 186 2.742204 GCCGTGATAGTTCCTTCCTTCC 60.742 54.545 0.00 0.00 0.00 3.46
186 188 2.093447 CAGCCGTGATAGTTCCTTCCTT 60.093 50.000 0.00 0.00 0.00 3.36
187 189 1.482593 CAGCCGTGATAGTTCCTTCCT 59.517 52.381 0.00 0.00 0.00 3.36
189 191 2.961526 TCAGCCGTGATAGTTCCTTC 57.038 50.000 0.00 0.00 0.00 3.46
190 192 3.695830 TTTCAGCCGTGATAGTTCCTT 57.304 42.857 0.00 0.00 30.85 3.36
191 193 3.695830 TTTTCAGCCGTGATAGTTCCT 57.304 42.857 0.00 0.00 30.85 3.36
207 209 0.442699 GACGGCACTCCACGATTTTC 59.557 55.000 0.00 0.00 0.00 2.29
208 210 0.953960 GGACGGCACTCCACGATTTT 60.954 55.000 0.00 0.00 0.00 1.82
211 213 2.298158 GATGGACGGCACTCCACGAT 62.298 60.000 3.78 0.00 43.38 3.73
241 253 2.567049 CAGACAGGGACGACGGTC 59.433 66.667 0.00 0.00 42.66 4.79
257 270 0.106268 TTTCTGTTTCTGGCCAGGCA 60.106 50.000 32.23 24.60 0.00 4.75
263 276 4.215613 ACTTTATCCGTTTCTGTTTCTGGC 59.784 41.667 0.00 0.00 0.00 4.85
283 300 4.716784 TGTTATGAGCTACTGGATCCACTT 59.283 41.667 11.44 3.06 0.00 3.16
319 336 0.459237 CTTACAGCCCGCTGACTCAG 60.459 60.000 22.97 1.21 46.30 3.35
320 337 0.898326 TCTTACAGCCCGCTGACTCA 60.898 55.000 22.97 2.77 46.30 3.41
321 338 0.246635 TTCTTACAGCCCGCTGACTC 59.753 55.000 22.97 0.00 46.30 3.36
322 339 0.685097 TTTCTTACAGCCCGCTGACT 59.315 50.000 22.97 4.42 46.30 3.41
323 340 1.739067 ATTTCTTACAGCCCGCTGAC 58.261 50.000 22.97 0.00 46.30 3.51
324 341 3.620427 TTATTTCTTACAGCCCGCTGA 57.380 42.857 22.97 4.39 46.30 4.26
326 343 3.014623 GGTTTATTTCTTACAGCCCGCT 58.985 45.455 0.00 0.00 0.00 5.52
327 344 2.750712 TGGTTTATTTCTTACAGCCCGC 59.249 45.455 0.00 0.00 0.00 6.13
328 345 4.007659 ACTGGTTTATTTCTTACAGCCCG 58.992 43.478 0.00 0.00 0.00 6.13
329 346 8.919777 ATATACTGGTTTATTTCTTACAGCCC 57.080 34.615 0.00 0.00 0.00 5.19
345 362 7.195374 TCCAACTAAGCAGAAATATACTGGT 57.805 36.000 8.18 8.18 45.87 4.00
346 363 6.708054 CCTCCAACTAAGCAGAAATATACTGG 59.292 42.308 10.47 0.00 36.09 4.00
347 364 7.500992 TCCTCCAACTAAGCAGAAATATACTG 58.499 38.462 5.73 5.73 38.27 2.74
348 365 7.676683 TCCTCCAACTAAGCAGAAATATACT 57.323 36.000 0.00 0.00 0.00 2.12
349 366 8.613482 GTTTCCTCCAACTAAGCAGAAATATAC 58.387 37.037 0.00 0.00 0.00 1.47
350 367 8.325787 TGTTTCCTCCAACTAAGCAGAAATATA 58.674 33.333 0.00 0.00 0.00 0.86
351 368 7.175104 TGTTTCCTCCAACTAAGCAGAAATAT 58.825 34.615 0.00 0.00 0.00 1.28
352 369 6.539173 TGTTTCCTCCAACTAAGCAGAAATA 58.461 36.000 0.00 0.00 0.00 1.40
353 370 5.385198 TGTTTCCTCCAACTAAGCAGAAAT 58.615 37.500 0.00 0.00 0.00 2.17
354 371 4.787551 TGTTTCCTCCAACTAAGCAGAAA 58.212 39.130 0.00 0.00 0.00 2.52
355 372 4.102524 TCTGTTTCCTCCAACTAAGCAGAA 59.897 41.667 0.00 0.00 37.47 3.02
356 373 3.646162 TCTGTTTCCTCCAACTAAGCAGA 59.354 43.478 0.00 0.00 37.89 4.26
357 374 4.008074 TCTGTTTCCTCCAACTAAGCAG 57.992 45.455 0.00 0.00 34.07 4.24
358 375 4.431416 TTCTGTTTCCTCCAACTAAGCA 57.569 40.909 0.00 0.00 0.00 3.91
359 376 6.174049 ACTATTCTGTTTCCTCCAACTAAGC 58.826 40.000 0.00 0.00 0.00 3.09
360 377 8.750298 TCTACTATTCTGTTTCCTCCAACTAAG 58.250 37.037 0.00 0.00 0.00 2.18
361 378 8.660295 TCTACTATTCTGTTTCCTCCAACTAA 57.340 34.615 0.00 0.00 0.00 2.24
362 379 8.114102 TCTCTACTATTCTGTTTCCTCCAACTA 58.886 37.037 0.00 0.00 0.00 2.24
363 380 6.954684 TCTCTACTATTCTGTTTCCTCCAACT 59.045 38.462 0.00 0.00 0.00 3.16
364 381 7.122948 TCTCTCTACTATTCTGTTTCCTCCAAC 59.877 40.741 0.00 0.00 0.00 3.77
365 382 7.182760 TCTCTCTACTATTCTGTTTCCTCCAA 58.817 38.462 0.00 0.00 0.00 3.53
366 383 6.732487 TCTCTCTACTATTCTGTTTCCTCCA 58.268 40.000 0.00 0.00 0.00 3.86
367 384 7.201875 CCTTCTCTCTACTATTCTGTTTCCTCC 60.202 44.444 0.00 0.00 0.00 4.30
368 385 7.340999 ACCTTCTCTCTACTATTCTGTTTCCTC 59.659 40.741 0.00 0.00 0.00 3.71
369 386 7.186268 ACCTTCTCTCTACTATTCTGTTTCCT 58.814 38.462 0.00 0.00 0.00 3.36
370 387 7.412853 ACCTTCTCTCTACTATTCTGTTTCC 57.587 40.000 0.00 0.00 0.00 3.13
372 389 8.471609 GCTTACCTTCTCTCTACTATTCTGTTT 58.528 37.037 0.00 0.00 0.00 2.83
373 390 7.201750 CGCTTACCTTCTCTCTACTATTCTGTT 60.202 40.741 0.00 0.00 0.00 3.16
374 391 6.261381 CGCTTACCTTCTCTCTACTATTCTGT 59.739 42.308 0.00 0.00 0.00 3.41
375 392 6.293735 CCGCTTACCTTCTCTCTACTATTCTG 60.294 46.154 0.00 0.00 0.00 3.02
376 393 5.766174 CCGCTTACCTTCTCTCTACTATTCT 59.234 44.000 0.00 0.00 0.00 2.40
377 394 5.048573 CCCGCTTACCTTCTCTCTACTATTC 60.049 48.000 0.00 0.00 0.00 1.75
378 395 4.828387 CCCGCTTACCTTCTCTCTACTATT 59.172 45.833 0.00 0.00 0.00 1.73
379 396 4.400120 CCCGCTTACCTTCTCTCTACTAT 58.600 47.826 0.00 0.00 0.00 2.12
380 397 3.818180 CCCGCTTACCTTCTCTCTACTA 58.182 50.000 0.00 0.00 0.00 1.82
381 398 2.657143 CCCGCTTACCTTCTCTCTACT 58.343 52.381 0.00 0.00 0.00 2.57
382 399 1.067364 GCCCGCTTACCTTCTCTCTAC 59.933 57.143 0.00 0.00 0.00 2.59
383 400 1.063867 AGCCCGCTTACCTTCTCTCTA 60.064 52.381 0.00 0.00 0.00 2.43
384 401 0.324830 AGCCCGCTTACCTTCTCTCT 60.325 55.000 0.00 0.00 0.00 3.10
385 402 0.103390 GAGCCCGCTTACCTTCTCTC 59.897 60.000 0.00 0.00 0.00 3.20
386 403 0.324830 AGAGCCCGCTTACCTTCTCT 60.325 55.000 0.00 0.00 0.00 3.10
387 404 0.537653 AAGAGCCCGCTTACCTTCTC 59.462 55.000 0.00 0.00 0.00 2.87
388 405 0.537653 GAAGAGCCCGCTTACCTTCT 59.462 55.000 8.59 0.00 32.72 2.85
389 406 0.249398 TGAAGAGCCCGCTTACCTTC 59.751 55.000 8.82 8.82 35.18 3.46
390 407 0.912486 ATGAAGAGCCCGCTTACCTT 59.088 50.000 0.00 0.00 0.00 3.50
391 408 1.789523 TATGAAGAGCCCGCTTACCT 58.210 50.000 0.00 0.00 0.00 3.08
392 409 2.614829 TTATGAAGAGCCCGCTTACC 57.385 50.000 0.00 0.00 0.00 2.85
393 410 4.634443 TCTTTTTATGAAGAGCCCGCTTAC 59.366 41.667 0.00 0.00 32.19 2.34
394 411 4.634443 GTCTTTTTATGAAGAGCCCGCTTA 59.366 41.667 0.00 0.00 36.39 3.09
395 412 3.440522 GTCTTTTTATGAAGAGCCCGCTT 59.559 43.478 0.00 0.00 36.39 4.68
396 413 3.010420 GTCTTTTTATGAAGAGCCCGCT 58.990 45.455 0.00 0.00 36.39 5.52
397 414 2.747446 TGTCTTTTTATGAAGAGCCCGC 59.253 45.455 0.00 0.00 36.39 6.13
398 415 3.181506 GCTGTCTTTTTATGAAGAGCCCG 60.182 47.826 0.00 0.00 36.39 6.13
399 416 4.013050 AGCTGTCTTTTTATGAAGAGCCC 58.987 43.478 0.00 0.00 36.39 5.19
400 417 4.940654 AGAGCTGTCTTTTTATGAAGAGCC 59.059 41.667 0.00 0.00 36.39 4.70
401 418 6.238076 GCTAGAGCTGTCTTTTTATGAAGAGC 60.238 42.308 0.00 0.00 35.85 4.09
402 419 6.019961 CGCTAGAGCTGTCTTTTTATGAAGAG 60.020 42.308 0.00 0.00 36.25 2.85
403 420 5.807520 CGCTAGAGCTGTCTTTTTATGAAGA 59.192 40.000 0.00 0.00 39.32 2.87
404 421 5.501574 GCGCTAGAGCTGTCTTTTTATGAAG 60.502 44.000 11.61 0.00 39.32 3.02
405 422 4.330074 GCGCTAGAGCTGTCTTTTTATGAA 59.670 41.667 11.61 0.00 39.32 2.57
406 423 3.865745 GCGCTAGAGCTGTCTTTTTATGA 59.134 43.478 11.61 0.00 39.32 2.15
407 424 3.302092 CGCGCTAGAGCTGTCTTTTTATG 60.302 47.826 16.69 0.00 39.32 1.90
408 425 2.860735 CGCGCTAGAGCTGTCTTTTTAT 59.139 45.455 16.69 0.00 39.32 1.40
409 426 2.259618 CGCGCTAGAGCTGTCTTTTTA 58.740 47.619 16.69 0.00 39.32 1.52
410 427 1.071605 CGCGCTAGAGCTGTCTTTTT 58.928 50.000 16.69 0.00 39.32 1.94
411 428 0.038159 ACGCGCTAGAGCTGTCTTTT 60.038 50.000 16.69 0.00 39.32 2.27
412 429 0.734253 CACGCGCTAGAGCTGTCTTT 60.734 55.000 16.69 0.00 39.32 2.52
413 430 1.153939 CACGCGCTAGAGCTGTCTT 60.154 57.895 16.69 0.00 39.32 3.01
414 431 2.487428 CACGCGCTAGAGCTGTCT 59.513 61.111 16.69 0.00 39.32 3.41
415 432 3.251043 GCACGCGCTAGAGCTGTC 61.251 66.667 16.69 6.71 39.32 3.51
425 442 2.820767 AAGTGTCTAGGAGCACGCGC 62.821 60.000 5.73 0.00 40.26 6.86
426 443 0.388649 AAAGTGTCTAGGAGCACGCG 60.389 55.000 3.53 3.53 40.26 6.01
427 444 1.071605 CAAAGTGTCTAGGAGCACGC 58.928 55.000 0.00 0.00 40.26 5.34
428 445 2.061773 CACAAAGTGTCTAGGAGCACG 58.938 52.381 0.00 0.00 40.26 5.34
429 446 3.005897 TCTCACAAAGTGTCTAGGAGCAC 59.994 47.826 0.00 0.00 34.79 4.40
430 447 3.230976 TCTCACAAAGTGTCTAGGAGCA 58.769 45.455 0.00 0.00 34.79 4.26
431 448 3.944055 TCTCACAAAGTGTCTAGGAGC 57.056 47.619 0.00 0.00 34.79 4.70
432 449 6.030548 TCATTCTCACAAAGTGTCTAGGAG 57.969 41.667 0.00 0.00 34.79 3.69
433 450 6.419484 TTCATTCTCACAAAGTGTCTAGGA 57.581 37.500 0.00 0.00 34.79 2.94
434 451 6.148480 CCTTTCATTCTCACAAAGTGTCTAGG 59.852 42.308 0.00 0.00 34.79 3.02
435 452 6.708054 ACCTTTCATTCTCACAAAGTGTCTAG 59.292 38.462 0.00 0.00 34.79 2.43
436 453 6.591935 ACCTTTCATTCTCACAAAGTGTCTA 58.408 36.000 0.00 0.00 34.79 2.59
437 454 5.440610 ACCTTTCATTCTCACAAAGTGTCT 58.559 37.500 0.00 0.00 34.79 3.41
438 455 5.757850 ACCTTTCATTCTCACAAAGTGTC 57.242 39.130 0.00 0.00 34.79 3.67
439 456 5.765182 CCTACCTTTCATTCTCACAAAGTGT 59.235 40.000 0.00 0.00 34.79 3.55
440 457 5.335191 GCCTACCTTTCATTCTCACAAAGTG 60.335 44.000 0.00 0.00 34.45 3.16
441 458 4.762251 GCCTACCTTTCATTCTCACAAAGT 59.238 41.667 0.00 0.00 0.00 2.66
442 459 4.156739 GGCCTACCTTTCATTCTCACAAAG 59.843 45.833 0.00 0.00 0.00 2.77
443 460 4.079253 GGCCTACCTTTCATTCTCACAAA 58.921 43.478 0.00 0.00 0.00 2.83
444 461 3.073798 TGGCCTACCTTTCATTCTCACAA 59.926 43.478 3.32 0.00 36.63 3.33
445 462 2.642311 TGGCCTACCTTTCATTCTCACA 59.358 45.455 3.32 0.00 36.63 3.58
446 463 3.010420 GTGGCCTACCTTTCATTCTCAC 58.990 50.000 3.32 0.00 36.63 3.51
447 464 2.642311 TGTGGCCTACCTTTCATTCTCA 59.358 45.455 3.32 0.00 36.63 3.27
448 465 3.350219 TGTGGCCTACCTTTCATTCTC 57.650 47.619 3.32 0.00 36.63 2.87
449 466 5.450818 TTATGTGGCCTACCTTTCATTCT 57.549 39.130 3.32 0.00 36.63 2.40
450 467 7.284489 TGTTATTATGTGGCCTACCTTTCATTC 59.716 37.037 3.32 0.00 36.63 2.67
451 468 7.122715 TGTTATTATGTGGCCTACCTTTCATT 58.877 34.615 3.32 0.00 36.63 2.57
452 469 6.668645 TGTTATTATGTGGCCTACCTTTCAT 58.331 36.000 3.32 0.40 36.63 2.57
453 470 6.068461 TGTTATTATGTGGCCTACCTTTCA 57.932 37.500 3.32 0.00 36.63 2.69
454 471 7.399245 TTTGTTATTATGTGGCCTACCTTTC 57.601 36.000 3.32 0.00 36.63 2.62
455 472 6.127451 GCTTTGTTATTATGTGGCCTACCTTT 60.127 38.462 3.32 0.00 36.63 3.11
456 473 5.359860 GCTTTGTTATTATGTGGCCTACCTT 59.640 40.000 3.32 0.00 36.63 3.50
457 474 4.887655 GCTTTGTTATTATGTGGCCTACCT 59.112 41.667 3.32 0.00 36.63 3.08
458 475 4.642885 TGCTTTGTTATTATGTGGCCTACC 59.357 41.667 3.32 0.00 0.00 3.18
459 476 5.357032 ACTGCTTTGTTATTATGTGGCCTAC 59.643 40.000 3.32 0.69 0.00 3.18
460 477 5.505780 ACTGCTTTGTTATTATGTGGCCTA 58.494 37.500 3.32 0.00 0.00 3.93
461 478 4.344104 ACTGCTTTGTTATTATGTGGCCT 58.656 39.130 3.32 0.00 0.00 5.19
462 479 4.718940 ACTGCTTTGTTATTATGTGGCC 57.281 40.909 0.00 0.00 0.00 5.36
463 480 6.027749 GTGTACTGCTTTGTTATTATGTGGC 58.972 40.000 0.00 0.00 0.00 5.01
464 481 7.377766 AGTGTACTGCTTTGTTATTATGTGG 57.622 36.000 0.00 0.00 0.00 4.17
465 482 9.677567 AAAAGTGTACTGCTTTGTTATTATGTG 57.322 29.630 13.82 0.00 36.43 3.21
502 519 8.531146 GCCCATTTTATAGCCAACATGTATAAT 58.469 33.333 0.00 0.00 0.00 1.28
503 520 7.728083 AGCCCATTTTATAGCCAACATGTATAA 59.272 33.333 0.00 0.00 0.00 0.98
504 521 7.176515 CAGCCCATTTTATAGCCAACATGTATA 59.823 37.037 0.00 0.00 0.00 1.47
505 522 6.015180 CAGCCCATTTTATAGCCAACATGTAT 60.015 38.462 0.00 0.00 0.00 2.29
506 523 5.301551 CAGCCCATTTTATAGCCAACATGTA 59.698 40.000 0.00 0.00 0.00 2.29
507 524 4.099881 CAGCCCATTTTATAGCCAACATGT 59.900 41.667 0.00 0.00 0.00 3.21
508 525 4.099881 ACAGCCCATTTTATAGCCAACATG 59.900 41.667 0.00 0.00 0.00 3.21
509 526 4.289245 ACAGCCCATTTTATAGCCAACAT 58.711 39.130 0.00 0.00 0.00 2.71
510 527 3.707316 ACAGCCCATTTTATAGCCAACA 58.293 40.909 0.00 0.00 0.00 3.33
511 528 7.703058 ATATACAGCCCATTTTATAGCCAAC 57.297 36.000 0.00 0.00 0.00 3.77
512 529 9.238368 GTTATATACAGCCCATTTTATAGCCAA 57.762 33.333 0.00 0.00 0.00 4.52
513 530 8.387039 TGTTATATACAGCCCATTTTATAGCCA 58.613 33.333 0.00 0.00 31.68 4.75
514 531 8.801882 TGTTATATACAGCCCATTTTATAGCC 57.198 34.615 0.00 0.00 31.68 3.93
517 534 9.184523 GCCATGTTATATACAGCCCATTTTATA 57.815 33.333 0.00 0.00 40.83 0.98
518 535 7.673504 TGCCATGTTATATACAGCCCATTTTAT 59.326 33.333 0.00 0.00 40.83 1.40
519 536 7.007116 TGCCATGTTATATACAGCCCATTTTA 58.993 34.615 0.00 0.00 40.83 1.52
520 537 5.837979 TGCCATGTTATATACAGCCCATTTT 59.162 36.000 0.00 0.00 40.83 1.82
521 538 5.243730 GTGCCATGTTATATACAGCCCATTT 59.756 40.000 0.00 0.00 40.83 2.32
522 539 4.766891 GTGCCATGTTATATACAGCCCATT 59.233 41.667 0.00 0.00 40.83 3.16
523 540 4.043310 AGTGCCATGTTATATACAGCCCAT 59.957 41.667 0.00 0.00 40.83 4.00
524 541 3.394274 AGTGCCATGTTATATACAGCCCA 59.606 43.478 0.00 0.00 40.83 5.36
525 542 3.753272 CAGTGCCATGTTATATACAGCCC 59.247 47.826 0.00 0.00 40.83 5.19
526 543 4.452455 GTCAGTGCCATGTTATATACAGCC 59.548 45.833 0.00 0.00 40.83 4.85
527 544 5.300752 AGTCAGTGCCATGTTATATACAGC 58.699 41.667 0.00 0.00 40.83 4.40
530 547 9.088512 GCTATAAGTCAGTGCCATGTTATATAC 57.911 37.037 0.00 0.00 0.00 1.47
531 548 8.258007 GGCTATAAGTCAGTGCCATGTTATATA 58.742 37.037 0.00 0.00 42.79 0.86
532 549 7.106239 GGCTATAAGTCAGTGCCATGTTATAT 58.894 38.462 0.00 0.00 42.79 0.86
533 550 6.464222 GGCTATAAGTCAGTGCCATGTTATA 58.536 40.000 0.00 0.00 42.79 0.98
534 551 5.308825 GGCTATAAGTCAGTGCCATGTTAT 58.691 41.667 0.00 0.00 42.79 1.89
535 552 4.703897 GGCTATAAGTCAGTGCCATGTTA 58.296 43.478 0.00 0.00 42.79 2.41
536 553 3.545703 GGCTATAAGTCAGTGCCATGTT 58.454 45.455 0.00 0.00 42.79 2.71
537 554 3.199880 GGCTATAAGTCAGTGCCATGT 57.800 47.619 0.00 0.00 42.79 3.21
565 582 4.873746 TGAGAGCATGGTTAGTATAGCC 57.126 45.455 0.00 0.00 43.03 3.93
566 583 5.098893 CGATGAGAGCATGGTTAGTATAGC 58.901 45.833 0.00 0.00 34.11 2.97
567 584 6.072452 TGACGATGAGAGCATGGTTAGTATAG 60.072 42.308 0.00 0.00 42.50 1.31
568 585 5.768164 TGACGATGAGAGCATGGTTAGTATA 59.232 40.000 0.00 0.00 42.50 1.47
569 586 4.584743 TGACGATGAGAGCATGGTTAGTAT 59.415 41.667 0.00 0.00 42.50 2.12
570 587 3.951680 TGACGATGAGAGCATGGTTAGTA 59.048 43.478 0.00 0.00 42.50 1.82
571 588 2.760650 TGACGATGAGAGCATGGTTAGT 59.239 45.455 0.00 0.00 42.50 2.24
572 589 3.119291 GTGACGATGAGAGCATGGTTAG 58.881 50.000 0.00 0.00 42.50 2.34
573 590 2.159099 GGTGACGATGAGAGCATGGTTA 60.159 50.000 0.00 0.00 42.50 2.85
574 591 1.406069 GGTGACGATGAGAGCATGGTT 60.406 52.381 0.00 0.00 42.50 3.67
575 592 0.176680 GGTGACGATGAGAGCATGGT 59.823 55.000 0.00 0.00 44.68 3.55
576 593 2.983433 GGTGACGATGAGAGCATGG 58.017 57.895 0.00 0.00 34.11 3.66
607 628 0.652592 CACGAATTGCGGATGGAGAC 59.347 55.000 0.00 0.00 46.49 3.36
608 629 1.089481 GCACGAATTGCGGATGGAGA 61.089 55.000 0.00 0.00 46.49 3.71
652 673 4.266714 TGGCCTTTTATTTCTCTAACCCG 58.733 43.478 3.32 0.00 0.00 5.28
653 674 4.098044 GCTGGCCTTTTATTTCTCTAACCC 59.902 45.833 3.32 0.00 0.00 4.11
654 675 4.098044 GGCTGGCCTTTTATTTCTCTAACC 59.902 45.833 3.32 0.00 0.00 2.85
655 676 4.098044 GGGCTGGCCTTTTATTTCTCTAAC 59.902 45.833 13.80 0.00 36.10 2.34
670 988 3.015145 TCAGTAAGGGGGCTGGCC 61.015 66.667 12.58 12.58 33.81 5.36
672 990 0.107017 CATGTCAGTAAGGGGGCTGG 60.107 60.000 0.00 0.00 33.81 4.85
674 992 1.609783 GCATGTCAGTAAGGGGGCT 59.390 57.895 0.00 0.00 0.00 5.19
675 993 1.819632 CGCATGTCAGTAAGGGGGC 60.820 63.158 0.00 0.00 0.00 5.80
677 995 1.153168 CCCGCATGTCAGTAAGGGG 60.153 63.158 0.00 0.00 35.36 4.79
679 997 1.819632 GGCCCGCATGTCAGTAAGG 60.820 63.158 0.00 0.00 0.00 2.69
680 998 1.819632 GGGCCCGCATGTCAGTAAG 60.820 63.158 5.69 0.00 0.00 2.34
681 999 2.270850 GGGCCCGCATGTCAGTAA 59.729 61.111 5.69 0.00 0.00 2.24
682 1000 3.792736 GGGGCCCGCATGTCAGTA 61.793 66.667 17.79 0.00 0.00 2.74
686 1004 3.570212 ATAGGGGGCCCGCATGTC 61.570 66.667 37.70 13.43 41.95 3.06
687 1005 3.889692 CATAGGGGGCCCGCATGT 61.890 66.667 37.70 21.68 41.95 3.21
688 1006 2.927201 AAACATAGGGGGCCCGCATG 62.927 60.000 37.70 33.96 41.95 4.06
690 1008 3.343326 AAACATAGGGGGCCCGCA 61.343 61.111 37.70 24.48 41.95 5.69
691 1009 2.518587 GAAACATAGGGGGCCCGC 60.519 66.667 31.08 31.08 41.95 6.13
692 1010 2.203153 CGAAACATAGGGGGCCCG 60.203 66.667 17.79 4.84 41.95 6.13
702 1020 2.749076 CCCACATCATCACACGAAACAT 59.251 45.455 0.00 0.00 0.00 2.71
710 1028 2.438254 GCGCCCCACATCATCACA 60.438 61.111 0.00 0.00 0.00 3.58
712 1030 2.438254 GTGCGCCCCACATCATCA 60.438 61.111 4.18 0.00 44.06 3.07
915 1272 2.829458 GAGGACGGACGGAGAGGG 60.829 72.222 0.00 0.00 0.00 4.30
972 1333 3.741476 CTTGAGCTGTTGCGGGCC 61.741 66.667 0.00 0.00 45.42 5.80
977 1338 0.520847 GCTTCTCCTTGAGCTGTTGC 59.479 55.000 0.00 0.00 40.05 4.17
978 1339 0.795085 CGCTTCTCCTTGAGCTGTTG 59.205 55.000 0.00 0.00 0.00 3.33
980 1341 0.246086 CTCGCTTCTCCTTGAGCTGT 59.754 55.000 0.00 0.00 0.00 4.40
981 1342 0.529833 TCTCGCTTCTCCTTGAGCTG 59.470 55.000 0.00 0.00 0.00 4.24
982 1343 1.136695 CATCTCGCTTCTCCTTGAGCT 59.863 52.381 0.00 0.00 0.00 4.09
983 1344 1.569708 CATCTCGCTTCTCCTTGAGC 58.430 55.000 0.00 0.00 0.00 4.26
984 1345 1.753649 TCCATCTCGCTTCTCCTTGAG 59.246 52.381 0.00 0.00 0.00 3.02
985 1346 1.753649 CTCCATCTCGCTTCTCCTTGA 59.246 52.381 0.00 0.00 0.00 3.02
986 1347 1.202510 CCTCCATCTCGCTTCTCCTTG 60.203 57.143 0.00 0.00 0.00 3.61
987 1348 1.118838 CCTCCATCTCGCTTCTCCTT 58.881 55.000 0.00 0.00 0.00 3.36
988 1349 0.032615 ACCTCCATCTCGCTTCTCCT 60.033 55.000 0.00 0.00 0.00 3.69
989 1350 0.103937 CACCTCCATCTCGCTTCTCC 59.896 60.000 0.00 0.00 0.00 3.71
993 1355 0.324738 TCTCCACCTCCATCTCGCTT 60.325 55.000 0.00 0.00 0.00 4.68
1140 1502 3.878667 GGATGGAAGGGCGGAGGG 61.879 72.222 0.00 0.00 0.00 4.30
1141 1503 3.878667 GGGATGGAAGGGCGGAGG 61.879 72.222 0.00 0.00 0.00 4.30
1142 1504 1.926426 AAAGGGATGGAAGGGCGGAG 61.926 60.000 0.00 0.00 0.00 4.63
1143 1505 1.921869 GAAAGGGATGGAAGGGCGGA 61.922 60.000 0.00 0.00 0.00 5.54
1144 1506 1.453928 GAAAGGGATGGAAGGGCGG 60.454 63.158 0.00 0.00 0.00 6.13
1145 1507 0.106519 ATGAAAGGGATGGAAGGGCG 60.107 55.000 0.00 0.00 0.00 6.13
1146 1508 2.175715 AGTATGAAAGGGATGGAAGGGC 59.824 50.000 0.00 0.00 0.00 5.19
1147 1509 4.464947 GAAGTATGAAAGGGATGGAAGGG 58.535 47.826 0.00 0.00 0.00 3.95
1148 1510 4.166919 AGGAAGTATGAAAGGGATGGAAGG 59.833 45.833 0.00 0.00 0.00 3.46
1149 1511 5.128919 CAGGAAGTATGAAAGGGATGGAAG 58.871 45.833 0.00 0.00 0.00 3.46
1150 1512 4.628715 GCAGGAAGTATGAAAGGGATGGAA 60.629 45.833 0.00 0.00 0.00 3.53
1151 1513 3.117888 GCAGGAAGTATGAAAGGGATGGA 60.118 47.826 0.00 0.00 0.00 3.41
1152 1514 3.117738 AGCAGGAAGTATGAAAGGGATGG 60.118 47.826 0.00 0.00 0.00 3.51
1153 1515 4.162040 AGCAGGAAGTATGAAAGGGATG 57.838 45.455 0.00 0.00 0.00 3.51
1154 1516 4.870021 AAGCAGGAAGTATGAAAGGGAT 57.130 40.909 0.00 0.00 0.00 3.85
1155 1517 4.335416 CAAAGCAGGAAGTATGAAAGGGA 58.665 43.478 0.00 0.00 0.00 4.20
1156 1518 3.119352 GCAAAGCAGGAAGTATGAAAGGG 60.119 47.826 0.00 0.00 0.00 3.95
1157 1519 3.760684 AGCAAAGCAGGAAGTATGAAAGG 59.239 43.478 0.00 0.00 0.00 3.11
1161 1523 3.009473 AGGAAGCAAAGCAGGAAGTATGA 59.991 43.478 0.00 0.00 0.00 2.15
1163 1525 3.728385 AGGAAGCAAAGCAGGAAGTAT 57.272 42.857 0.00 0.00 0.00 2.12
1169 1531 2.098770 GCAAGATAGGAAGCAAAGCAGG 59.901 50.000 0.00 0.00 0.00 4.85
1172 1534 2.094675 TGGCAAGATAGGAAGCAAAGC 58.905 47.619 0.00 0.00 0.00 3.51
1174 1536 5.018809 AGAAATGGCAAGATAGGAAGCAAA 58.981 37.500 0.00 0.00 0.00 3.68
1176 1538 4.240881 AGAAATGGCAAGATAGGAAGCA 57.759 40.909 0.00 0.00 0.00 3.91
1181 1543 2.808543 GCGGTAGAAATGGCAAGATAGG 59.191 50.000 0.00 0.00 0.00 2.57
1182 1544 2.808543 GGCGGTAGAAATGGCAAGATAG 59.191 50.000 0.00 0.00 0.00 2.08
1215 1594 2.742710 TAGCTCGCCACACACGACAC 62.743 60.000 0.00 0.00 35.35 3.67
1232 1611 3.959520 GATCGATCGAGCTCGGTAG 57.040 57.895 33.98 27.88 39.13 3.18
1254 1635 6.561614 CAGAGCTAACTAACTAAACCGATCA 58.438 40.000 0.00 0.00 0.00 2.92
1260 1641 6.869388 ACAGAAGCAGAGCTAACTAACTAAAC 59.131 38.462 0.00 0.00 38.25 2.01
1262 1643 6.591750 ACAGAAGCAGAGCTAACTAACTAA 57.408 37.500 0.00 0.00 38.25 2.24
1263 1644 6.390721 CAACAGAAGCAGAGCTAACTAACTA 58.609 40.000 0.00 0.00 38.25 2.24
1264 1645 5.233988 CAACAGAAGCAGAGCTAACTAACT 58.766 41.667 0.00 0.00 38.25 2.24
1267 1648 3.055819 CCCAACAGAAGCAGAGCTAACTA 60.056 47.826 0.00 0.00 38.25 2.24
1268 1649 2.289945 CCCAACAGAAGCAGAGCTAACT 60.290 50.000 0.00 0.00 38.25 2.24
1287 1668 1.905354 AGCCAGCTGCAAGAAACCC 60.905 57.895 8.66 0.00 44.83 4.11
1326 1711 4.322499 CCACCAACTAACTACCAATCGAGT 60.322 45.833 0.00 0.00 0.00 4.18
1438 1897 7.710475 CAGAAAAGTATGGTTTGGTGTGATTTT 59.290 33.333 0.00 0.00 0.00 1.82
1534 2003 2.736995 CACGAACGACATGGCCGT 60.737 61.111 9.20 9.20 42.61 5.68
1557 2038 0.038166 GAAGTCCTGGCATGGTTGGA 59.962 55.000 0.00 0.00 0.00 3.53
1558 2039 0.038744 AGAAGTCCTGGCATGGTTGG 59.961 55.000 0.00 0.00 0.00 3.77
1567 2048 5.244178 ACACTACTAACTGAAGAAGTCCTGG 59.756 44.000 0.00 0.00 38.56 4.45
1570 2051 6.807720 GCTTACACTACTAACTGAAGAAGTCC 59.192 42.308 0.00 0.00 38.56 3.85
1606 2087 5.705905 GCTAAGCAGGTAATTATTAGTGGGG 59.294 44.000 5.23 0.00 0.00 4.96
1624 2105 0.585357 CGCACATGAGGATGCTAAGC 59.415 55.000 0.00 0.00 39.79 3.09
1644 2125 0.447801 GAACAACACATAGCGCCTGG 59.552 55.000 2.29 0.00 0.00 4.45
1671 2152 6.407202 ACTAACTAATTCACTGCCCTGTAAG 58.593 40.000 0.00 0.00 0.00 2.34
1672 2153 6.368779 ACTAACTAATTCACTGCCCTGTAA 57.631 37.500 0.00 0.00 0.00 2.41
1673 2154 6.368779 AACTAACTAATTCACTGCCCTGTA 57.631 37.500 0.00 0.00 0.00 2.74
1674 2155 4.910458 ACTAACTAATTCACTGCCCTGT 57.090 40.909 0.00 0.00 0.00 4.00
1675 2156 6.879458 AGTTAACTAACTAATTCACTGCCCTG 59.121 38.462 6.26 0.00 44.18 4.45
1676 2157 6.879458 CAGTTAACTAACTAATTCACTGCCCT 59.121 38.462 8.04 0.00 44.19 5.19
1677 2158 6.093633 CCAGTTAACTAACTAATTCACTGCCC 59.906 42.308 8.04 0.00 44.19 5.36
1679 2160 6.371825 AGCCAGTTAACTAACTAATTCACTGC 59.628 38.462 8.04 0.00 44.19 4.40
1680 2161 7.602644 TCAGCCAGTTAACTAACTAATTCACTG 59.397 37.037 8.04 4.48 44.19 3.66
1682 2163 7.900782 TCAGCCAGTTAACTAACTAATTCAC 57.099 36.000 8.04 0.00 44.19 3.18
1699 2184 2.868583 CACGACCATCTTAATCAGCCAG 59.131 50.000 0.00 0.00 0.00 4.85
1703 2192 1.860950 CGCCACGACCATCTTAATCAG 59.139 52.381 0.00 0.00 0.00 2.90
1828 2330 0.251916 CGCCCATGTAAACTCCTGGA 59.748 55.000 0.00 0.00 0.00 3.86
1884 2388 0.178068 TCCTCTAAATGCACCGGCTC 59.822 55.000 0.00 0.00 41.91 4.70
1911 2415 8.012197 AAATGGTCAATTTCACACAAAAGGTGT 61.012 33.333 0.00 0.00 45.06 4.16
2023 2527 8.000780 AGCAGGTTCTTTATTAGGCTTAAATG 57.999 34.615 0.00 0.00 0.00 2.32
2024 2528 8.470002 CAAGCAGGTTCTTTATTAGGCTTAAAT 58.530 33.333 0.00 0.00 38.19 1.40
2025 2529 7.093945 CCAAGCAGGTTCTTTATTAGGCTTAAA 60.094 37.037 0.00 0.00 38.19 1.52
2026 2530 6.377146 CCAAGCAGGTTCTTTATTAGGCTTAA 59.623 38.462 0.00 0.00 38.19 1.85
2028 2532 4.706962 CCAAGCAGGTTCTTTATTAGGCTT 59.293 41.667 0.00 0.00 40.64 4.35
2029 2533 4.018415 TCCAAGCAGGTTCTTTATTAGGCT 60.018 41.667 0.00 0.00 39.02 4.58
2030 2534 4.270008 TCCAAGCAGGTTCTTTATTAGGC 58.730 43.478 0.00 0.00 39.02 3.93
2031 2535 5.237344 CGATCCAAGCAGGTTCTTTATTAGG 59.763 44.000 5.19 0.00 39.02 2.69
2042 2546 0.107017 CCAATCCGATCCAAGCAGGT 60.107 55.000 0.00 0.00 39.02 4.00
2101 2612 2.949106 GTGCTGCTCACACGCAAT 59.051 55.556 0.00 0.00 44.98 3.56
2154 2681 0.693049 ACTCCTGCTGGTTAAGGTGG 59.307 55.000 9.73 0.00 34.94 4.61
2231 2758 2.017559 GAGCGTCCGGGTTAGCAGAT 62.018 60.000 0.00 0.00 0.00 2.90
2235 2762 0.388294 ATTAGAGCGTCCGGGTTAGC 59.612 55.000 0.00 2.05 0.00 3.09
2246 2773 3.134458 CCTTTCCTGGCTAATTAGAGCG 58.866 50.000 16.85 2.93 43.83 5.03
2396 2932 2.283298 GATGGTCTACAGCCATGTGTG 58.717 52.381 1.16 0.00 45.87 3.82
2444 2980 1.369321 GCCAAGGGCGAGAGATAGG 59.631 63.158 0.00 0.00 39.62 2.57
2454 2990 4.440127 CATGTTGGCGCCAAGGGC 62.440 66.667 40.97 28.87 46.75 5.19
2455 2991 4.440127 GCATGTTGGCGCCAAGGG 62.440 66.667 40.97 30.79 36.52 3.95
2463 2999 2.265073 ATTACGCACCGCATGTTGGC 62.265 55.000 6.09 0.00 0.00 4.52
2464 3000 0.170116 AATTACGCACCGCATGTTGG 59.830 50.000 4.76 4.76 0.00 3.77
2465 3001 2.436670 GTAATTACGCACCGCATGTTG 58.563 47.619 0.00 0.00 0.00 3.33
2466 3002 1.399089 GGTAATTACGCACCGCATGTT 59.601 47.619 9.46 0.00 0.00 2.71
2513 3049 1.980232 GGGCCGGGGGTTAAAAGTG 60.980 63.158 2.18 0.00 0.00 3.16
2526 3068 1.134610 ACTGATTAACTAACCGGGCCG 60.135 52.381 21.46 21.46 0.00 6.13
2527 3069 2.704464 ACTGATTAACTAACCGGGCC 57.296 50.000 6.32 0.00 0.00 5.80
2537 3079 5.345741 TGCGACGGTAACTAAACTGATTAAC 59.654 40.000 0.00 0.00 0.00 2.01
2538 3080 5.345741 GTGCGACGGTAACTAAACTGATTAA 59.654 40.000 0.00 0.00 0.00 1.40
2561 3115 2.870372 GGCACCGTCTACGTACGT 59.130 61.111 25.98 25.98 41.27 3.57
2563 3117 0.099436 AATCGGCACCGTCTACGTAC 59.901 55.000 9.23 0.00 40.74 3.67
2579 3133 5.352569 AGCAATGACTGTGCAAGTACTAATC 59.647 40.000 0.00 0.00 44.74 1.75
2587 3141 1.068748 GGTGAGCAATGACTGTGCAAG 60.069 52.381 0.00 0.00 44.74 4.01
2589 3143 0.890542 GGGTGAGCAATGACTGTGCA 60.891 55.000 0.00 0.00 44.74 4.57
2599 3153 1.179152 CAATCATGCAGGGTGAGCAA 58.821 50.000 0.00 0.00 46.27 3.91
2601 3155 0.737219 GTCAATCATGCAGGGTGAGC 59.263 55.000 0.00 0.00 0.00 4.26
2648 3202 3.685756 CGATCGATTCTACTCCTCTACCC 59.314 52.174 10.26 0.00 0.00 3.69
2651 3205 4.040095 TGGACGATCGATTCTACTCCTCTA 59.960 45.833 24.34 0.00 0.00 2.43
2653 3207 3.139850 TGGACGATCGATTCTACTCCTC 58.860 50.000 24.34 4.21 0.00 3.71
2804 3370 7.012989 CGTAGAGAAAAGAAAAGGGGAGAAAAA 59.987 37.037 0.00 0.00 0.00 1.94
2808 3374 4.591924 ACGTAGAGAAAAGAAAAGGGGAGA 59.408 41.667 0.00 0.00 0.00 3.71
2976 3602 1.677637 GGAGGCGGCAACTAGCTAGT 61.678 60.000 20.95 20.95 44.79 2.57
2977 3603 1.068250 GGAGGCGGCAACTAGCTAG 59.932 63.158 19.44 19.44 44.79 3.42
2978 3604 1.381327 AGGAGGCGGCAACTAGCTA 60.381 57.895 13.08 0.00 44.79 3.32
3007 3633 1.550072 AGAAAAATCCGGTGGCCAATG 59.450 47.619 7.24 1.83 0.00 2.82
3057 3686 3.544684 CATGTAGTATGCCCAAGCTTGA 58.455 45.455 28.05 8.51 40.80 3.02
3058 3687 2.033801 GCATGTAGTATGCCCAAGCTTG 59.966 50.000 19.93 19.93 40.80 4.01
3059 3688 2.301346 GCATGTAGTATGCCCAAGCTT 58.699 47.619 0.00 0.00 40.80 3.74
3347 4017 2.538141 CCCTTCCTCTTGGGGTGCA 61.538 63.158 0.00 0.00 39.76 4.57
3441 4111 2.746277 CTTTTAGTGGGCGCGCCT 60.746 61.111 45.23 30.73 36.10 5.52
3459 4129 1.639298 GAGCAGATTTTCAGGCGCGT 61.639 55.000 8.43 0.00 0.00 6.01
3529 4200 2.360475 GAACCCAGCACTGCCTCC 60.360 66.667 0.00 0.00 0.00 4.30
3620 4293 7.042797 AGCAACAATGGCTTATTTACCATAG 57.957 36.000 0.00 0.00 46.04 2.23
3668 4345 0.475906 ATGCATCCCTAGGGCTCAAC 59.524 55.000 24.42 10.73 34.68 3.18
3669 4346 0.475475 CATGCATCCCTAGGGCTCAA 59.525 55.000 24.42 6.10 34.68 3.02
3767 4453 2.311854 ATTGTGGGGGCAGGAGGAG 61.312 63.158 0.00 0.00 0.00 3.69
3768 4454 2.204291 ATTGTGGGGGCAGGAGGA 60.204 61.111 0.00 0.00 0.00 3.71
3790 4476 8.103305 CCAGCCTTACTATACATACAATTCCAT 58.897 37.037 0.00 0.00 0.00 3.41
3903 4597 2.223618 GGAGCAGCACTAGCAGTACTAC 60.224 54.545 0.00 0.00 45.49 2.73
3904 4598 2.025155 GGAGCAGCACTAGCAGTACTA 58.975 52.381 0.00 0.00 45.49 1.82
3905 4599 0.820871 GGAGCAGCACTAGCAGTACT 59.179 55.000 0.00 0.00 45.49 2.73
3906 4600 0.532573 TGGAGCAGCACTAGCAGTAC 59.467 55.000 0.00 0.00 45.49 2.73
3907 4601 1.489481 ATGGAGCAGCACTAGCAGTA 58.511 50.000 0.00 0.00 45.49 2.74
3908 4602 0.617413 AATGGAGCAGCACTAGCAGT 59.383 50.000 0.00 0.00 45.49 4.40
3909 4603 2.609427 TAATGGAGCAGCACTAGCAG 57.391 50.000 0.00 0.00 45.49 4.24
3910 4604 3.565764 AATAATGGAGCAGCACTAGCA 57.434 42.857 0.00 0.00 45.49 3.49
3911 4605 5.760253 TCTTTAATAATGGAGCAGCACTAGC 59.240 40.000 0.00 0.00 42.56 3.42
3912 4606 7.792374 TTCTTTAATAATGGAGCAGCACTAG 57.208 36.000 0.00 0.00 0.00 2.57
3913 4607 7.992608 TCATTCTTTAATAATGGAGCAGCACTA 59.007 33.333 0.00 0.00 35.48 2.74
3914 4608 6.830324 TCATTCTTTAATAATGGAGCAGCACT 59.170 34.615 0.00 0.00 35.48 4.40
3915 4609 7.031226 TCATTCTTTAATAATGGAGCAGCAC 57.969 36.000 0.00 0.00 35.48 4.40
3939 4633 7.521529 CACAAGACATCAATCATTACTCGTTT 58.478 34.615 0.00 0.00 0.00 3.60
3995 4691 3.364277 GGGATCCGACGGAGAAAAG 57.636 57.895 22.99 0.00 34.05 2.27
4026 4722 1.408822 GCCAACCCGAGATTCCATTCT 60.409 52.381 0.00 0.00 0.00 2.40
4042 4738 3.119319 TCTATACATGTTCCAGGGCCAA 58.881 45.455 2.30 0.00 0.00 4.52
4043 4739 2.770447 TCTATACATGTTCCAGGGCCA 58.230 47.619 2.30 0.00 0.00 5.36
4127 4838 2.111043 AGCCACACGAACACCCAG 59.889 61.111 0.00 0.00 0.00 4.45
4132 4843 0.678366 AACCAACAGCCACACGAACA 60.678 50.000 0.00 0.00 0.00 3.18
4248 6088 1.753848 CGCCCAAATCATCCAGCCA 60.754 57.895 0.00 0.00 0.00 4.75
4305 6145 1.952133 GCGTGCACGTAACCAGTCA 60.952 57.895 36.80 0.00 42.22 3.41
4368 6208 2.436646 CCGGCCACGCTTTCATCT 60.437 61.111 2.24 0.00 39.22 2.90
4369 6209 4.179579 GCCGGCCACGCTTTCATC 62.180 66.667 18.11 0.00 39.22 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.