Multiple sequence alignment - TraesCS1D01G247200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G247200 chr1D 100.000 3881 0 0 1 3881 339967343 339963463 0.000000e+00 7167
1 TraesCS1D01G247200 chr1D 89.598 423 34 8 3255 3671 418768945 418768527 2.660000e-146 529
2 TraesCS1D01G247200 chr1D 89.474 418 37 7 3262 3677 1148943 1148531 4.440000e-144 521
3 TraesCS1D01G247200 chr1A 93.679 2452 94 17 799 3228 439932567 439930155 0.000000e+00 3613
4 TraesCS1D01G247200 chr1A 90.942 276 12 5 101 364 439933393 439933119 3.690000e-95 359
5 TraesCS1D01G247200 chr1A 86.219 283 22 8 375 643 439932926 439932647 1.360000e-74 291
6 TraesCS1D01G247200 chr1A 94.048 84 4 1 3799 3881 439929967 439929884 4.070000e-25 126
7 TraesCS1D01G247200 chr1B 94.808 2292 76 13 799 3068 454919286 454917016 0.000000e+00 3533
8 TraesCS1D01G247200 chr1B 89.109 505 32 7 1 484 454920564 454920062 1.190000e-169 606
9 TraesCS1D01G247200 chr1B 94.175 206 8 3 3055 3257 454913986 454913782 1.050000e-80 311
10 TraesCS1D01G247200 chr4D 93.029 416 22 6 3259 3671 330365638 330365227 5.550000e-168 601
11 TraesCS1D01G247200 chr2D 90.553 434 33 6 3241 3671 600756662 600757090 5.630000e-158 568
12 TraesCS1D01G247200 chr2D 91.346 416 25 11 3261 3671 571605187 571604778 3.390000e-155 558
13 TraesCS1D01G247200 chr3D 91.932 409 26 7 3264 3671 492616414 492616012 2.020000e-157 566
14 TraesCS1D01G247200 chr6B 91.304 414 30 6 3261 3671 262468830 262468420 9.420000e-156 560
15 TraesCS1D01G247200 chr5D 90.625 416 31 7 3261 3671 549098824 549098412 2.640000e-151 545
16 TraesCS1D01G247200 chr5D 91.892 111 9 0 637 747 510619754 510619864 5.190000e-34 156
17 TraesCS1D01G247200 chr7D 89.831 413 36 6 3262 3671 101249219 101249628 3.440000e-145 525
18 TraesCS1D01G247200 chr7D 88.696 115 13 0 633 747 575360554 575360440 1.450000e-29 141
19 TraesCS1D01G247200 chr3B 83.450 429 66 3 2351 2775 703995021 703995448 1.010000e-105 394
20 TraesCS1D01G247200 chr3B 82.965 452 57 8 1406 1857 703963998 703964429 1.310000e-104 390
21 TraesCS1D01G247200 chr6A 89.474 114 12 0 637 750 609034283 609034170 1.120000e-30 145
22 TraesCS1D01G247200 chr5B 88.000 100 12 0 634 733 467228600 467228699 6.810000e-23 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G247200 chr1D 339963463 339967343 3880 True 7167.000000 7167 100.000000 1 3881 1 chr1D.!!$R2 3880
1 TraesCS1D01G247200 chr1A 439929884 439933393 3509 True 1097.250000 3613 91.222000 101 3881 4 chr1A.!!$R1 3780
2 TraesCS1D01G247200 chr1B 454913782 454920564 6782 True 1483.333333 3533 92.697333 1 3257 3 chr1B.!!$R1 3256

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
660 1424 0.111446 TTCAAATCCTGTGGGCGGAA 59.889 50.0 0.0 0.0 33.55 4.30 F
854 1656 0.171007 GCACCACCAATGACCAATCG 59.829 55.0 0.0 0.0 0.00 3.34 F
855 1657 0.171007 CACCACCAATGACCAATCGC 59.829 55.0 0.0 0.0 0.00 4.58 F
2370 3174 0.951040 GCCTGGTCGAGTTCACCAAG 60.951 60.0 0.0 0.0 43.56 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1513 2317 0.523072 TTGTAGACGCCGGTGTACTC 59.477 55.0 23.00 14.09 41.96 2.59 R
1857 2661 0.531974 GCGTGGTGAGGTTGTTCTCA 60.532 55.0 0.00 0.00 41.03 3.27 R
2554 3358 0.894184 ACCTCCGTCTCGAGCTTGAA 60.894 55.0 7.81 0.00 0.00 2.69 R
3658 7528 0.028505 TAGACACGACGCGGCTAATC 59.971 55.0 11.76 3.93 0.00 1.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.151798 GCTAATTTCTTCGACTGTGTTGC 58.848 43.478 0.00 0.00 0.00 4.17
34 35 1.571460 GACTGTGTTGCTTGCCTCG 59.429 57.895 0.00 0.00 0.00 4.63
42 43 1.237285 TTGCTTGCCTCGGCTCTTTC 61.237 55.000 9.65 0.00 42.51 2.62
67 68 4.224370 GGTTTACTCACATTCCTAGGGTCA 59.776 45.833 9.46 0.00 0.00 4.02
72 73 5.070685 ACTCACATTCCTAGGGTCAAAAAC 58.929 41.667 9.46 0.00 0.00 2.43
175 180 4.357918 AGACAGGTCACAGCTAAAACAT 57.642 40.909 1.84 0.00 0.00 2.71
184 189 6.089417 GGTCACAGCTAAAACATTAACATTGC 59.911 38.462 0.00 0.00 0.00 3.56
229 234 2.814097 GCCTTTGTTGGACAAGAGGCTA 60.814 50.000 23.96 2.06 46.57 3.93
254 259 1.069636 GTGAGCTGCACTACAACAAGC 60.070 52.381 1.02 0.00 44.27 4.01
283 288 4.518970 TGTAAATGCTTCCAGGAGTTGAAC 59.481 41.667 0.00 0.00 0.00 3.18
429 637 4.003648 CTCTATCGGTTTTCTTGCCACTT 58.996 43.478 0.00 0.00 0.00 3.16
437 654 4.105486 GTTTTCTTGCCACTTCAAGTGTC 58.895 43.478 16.50 3.95 44.50 3.67
468 688 9.967451 TTCTACTAGCTGCTCTTATATCTACAT 57.033 33.333 4.91 0.00 0.00 2.29
471 691 8.279970 ACTAGCTGCTCTTATATCTACATCAG 57.720 38.462 4.91 0.00 0.00 2.90
523 1287 3.679389 TGAAGCCATTGACTTTCCTCTC 58.321 45.455 0.00 0.00 0.00 3.20
554 1318 3.133003 CCTCTCTATACACTGTGTTGGGG 59.867 52.174 19.73 9.50 0.00 4.96
573 1337 8.986991 TGTTGGGGTGCTGAATTAATAAAATAT 58.013 29.630 0.00 0.00 0.00 1.28
635 1399 6.808008 AAATCTTCTCGTGAAACACATGAT 57.192 33.333 0.00 0.00 42.63 2.45
636 1400 6.414408 AATCTTCTCGTGAAACACATGATC 57.586 37.500 0.00 0.00 42.63 2.92
637 1401 4.245660 TCTTCTCGTGAAACACATGATCC 58.754 43.478 0.00 0.00 42.63 3.36
638 1402 3.676291 TCTCGTGAAACACATGATCCA 57.324 42.857 0.00 0.00 42.63 3.41
639 1403 4.001618 TCTCGTGAAACACATGATCCAA 57.998 40.909 0.00 0.00 42.63 3.53
640 1404 4.384940 TCTCGTGAAACACATGATCCAAA 58.615 39.130 0.00 0.00 42.63 3.28
641 1405 5.003160 TCTCGTGAAACACATGATCCAAAT 58.997 37.500 0.00 0.00 42.63 2.32
642 1406 5.473162 TCTCGTGAAACACATGATCCAAATT 59.527 36.000 0.00 0.00 42.63 1.82
643 1407 5.698832 TCGTGAAACACATGATCCAAATTC 58.301 37.500 0.00 0.00 39.29 2.17
644 1408 5.240403 TCGTGAAACACATGATCCAAATTCA 59.760 36.000 0.00 0.00 39.29 2.57
645 1409 5.919707 CGTGAAACACATGATCCAAATTCAA 59.080 36.000 0.00 0.00 37.69 2.69
646 1410 6.420306 CGTGAAACACATGATCCAAATTCAAA 59.580 34.615 0.00 0.00 37.69 2.69
647 1411 7.116662 CGTGAAACACATGATCCAAATTCAAAT 59.883 33.333 0.00 0.00 37.69 2.32
648 1412 8.437742 GTGAAACACATGATCCAAATTCAAATC 58.562 33.333 0.00 0.00 36.32 2.17
649 1413 7.603404 TGAAACACATGATCCAAATTCAAATCC 59.397 33.333 0.00 0.00 0.00 3.01
650 1414 6.862469 ACACATGATCCAAATTCAAATCCT 57.138 33.333 0.00 0.00 0.00 3.24
651 1415 6.636705 ACACATGATCCAAATTCAAATCCTG 58.363 36.000 0.00 0.00 0.00 3.86
652 1416 6.211986 ACACATGATCCAAATTCAAATCCTGT 59.788 34.615 0.00 0.00 30.33 4.00
653 1417 6.533723 CACATGATCCAAATTCAAATCCTGTG 59.466 38.462 0.00 13.02 37.94 3.66
654 1418 5.664294 TGATCCAAATTCAAATCCTGTGG 57.336 39.130 0.00 0.00 0.00 4.17
655 1419 4.467082 TGATCCAAATTCAAATCCTGTGGG 59.533 41.667 0.00 0.00 0.00 4.61
656 1420 2.566724 TCCAAATTCAAATCCTGTGGGC 59.433 45.455 0.00 0.00 0.00 5.36
657 1421 2.609350 CAAATTCAAATCCTGTGGGCG 58.391 47.619 0.00 0.00 0.00 6.13
658 1422 1.185315 AATTCAAATCCTGTGGGCGG 58.815 50.000 0.00 0.00 0.00 6.13
659 1423 0.331278 ATTCAAATCCTGTGGGCGGA 59.669 50.000 0.00 0.00 34.52 5.54
660 1424 0.111446 TTCAAATCCTGTGGGCGGAA 59.889 50.000 0.00 0.00 33.55 4.30
661 1425 0.331278 TCAAATCCTGTGGGCGGAAT 59.669 50.000 0.00 0.00 33.55 3.01
662 1426 1.185315 CAAATCCTGTGGGCGGAATT 58.815 50.000 0.00 0.00 33.55 2.17
663 1427 1.550072 CAAATCCTGTGGGCGGAATTT 59.450 47.619 0.00 0.00 33.55 1.82
664 1428 2.757868 CAAATCCTGTGGGCGGAATTTA 59.242 45.455 0.00 0.00 33.55 1.40
665 1429 3.312736 AATCCTGTGGGCGGAATTTAT 57.687 42.857 0.00 0.00 33.55 1.40
666 1430 2.818751 TCCTGTGGGCGGAATTTATT 57.181 45.000 0.00 0.00 0.00 1.40
667 1431 3.094484 TCCTGTGGGCGGAATTTATTT 57.906 42.857 0.00 0.00 0.00 1.40
668 1432 3.020984 TCCTGTGGGCGGAATTTATTTC 58.979 45.455 0.00 0.00 0.00 2.17
669 1433 2.757868 CCTGTGGGCGGAATTTATTTCA 59.242 45.455 0.00 0.00 35.94 2.69
670 1434 3.428862 CCTGTGGGCGGAATTTATTTCAC 60.429 47.826 0.00 0.00 35.94 3.18
671 1435 2.162608 TGTGGGCGGAATTTATTTCACG 59.837 45.455 0.00 0.00 35.94 4.35
672 1436 1.746220 TGGGCGGAATTTATTTCACGG 59.254 47.619 0.00 0.00 35.94 4.94
673 1437 2.018515 GGGCGGAATTTATTTCACGGA 58.981 47.619 0.00 0.00 35.94 4.69
674 1438 2.621526 GGGCGGAATTTATTTCACGGAT 59.378 45.455 0.00 0.00 35.94 4.18
675 1439 3.067601 GGGCGGAATTTATTTCACGGATT 59.932 43.478 0.00 0.00 35.94 3.01
676 1440 4.440940 GGGCGGAATTTATTTCACGGATTT 60.441 41.667 0.00 0.00 35.94 2.17
677 1441 4.502645 GGCGGAATTTATTTCACGGATTTG 59.497 41.667 0.00 0.00 35.94 2.32
678 1442 5.336744 GCGGAATTTATTTCACGGATTTGA 58.663 37.500 0.00 0.00 35.94 2.69
679 1443 5.802956 GCGGAATTTATTTCACGGATTTGAA 59.197 36.000 0.00 0.00 35.94 2.69
680 1444 6.309251 GCGGAATTTATTTCACGGATTTGAAA 59.691 34.615 1.92 1.92 46.78 2.69
681 1445 7.662761 CGGAATTTATTTCACGGATTTGAAAC 58.337 34.615 1.49 0.00 45.84 2.78
682 1446 7.540745 CGGAATTTATTTCACGGATTTGAAACT 59.459 33.333 1.49 0.00 45.84 2.66
683 1447 9.203421 GGAATTTATTTCACGGATTTGAAACTT 57.797 29.630 1.49 0.00 45.84 2.66
685 1449 7.938563 TTTATTTCACGGATTTGAAACTTGG 57.061 32.000 1.49 0.00 45.84 3.61
686 1450 4.993029 TTTCACGGATTTGAAACTTGGT 57.007 36.364 0.00 0.00 39.94 3.67
687 1451 3.980646 TCACGGATTTGAAACTTGGTG 57.019 42.857 0.00 0.00 0.00 4.17
688 1452 3.283751 TCACGGATTTGAAACTTGGTGT 58.716 40.909 0.00 0.00 0.00 4.16
689 1453 3.314080 TCACGGATTTGAAACTTGGTGTC 59.686 43.478 0.00 0.00 0.00 3.67
690 1454 3.315191 CACGGATTTGAAACTTGGTGTCT 59.685 43.478 0.00 0.00 0.00 3.41
691 1455 3.564225 ACGGATTTGAAACTTGGTGTCTC 59.436 43.478 0.00 0.00 0.00 3.36
692 1456 3.563808 CGGATTTGAAACTTGGTGTCTCA 59.436 43.478 0.00 0.00 0.00 3.27
693 1457 4.554723 CGGATTTGAAACTTGGTGTCTCAC 60.555 45.833 0.00 0.00 0.00 3.51
694 1458 4.338118 GGATTTGAAACTTGGTGTCTCACA 59.662 41.667 2.41 0.00 35.86 3.58
705 1469 3.477210 GTGTCTCACACCTTCCTTCTT 57.523 47.619 0.00 0.00 43.05 2.52
706 1470 4.602340 GTGTCTCACACCTTCCTTCTTA 57.398 45.455 0.00 0.00 43.05 2.10
707 1471 4.957296 GTGTCTCACACCTTCCTTCTTAA 58.043 43.478 0.00 0.00 43.05 1.85
708 1472 5.552178 GTGTCTCACACCTTCCTTCTTAAT 58.448 41.667 0.00 0.00 43.05 1.40
709 1473 6.698380 GTGTCTCACACCTTCCTTCTTAATA 58.302 40.000 0.00 0.00 43.05 0.98
710 1474 7.159372 GTGTCTCACACCTTCCTTCTTAATAA 58.841 38.462 0.00 0.00 43.05 1.40
711 1475 7.824779 GTGTCTCACACCTTCCTTCTTAATAAT 59.175 37.037 0.00 0.00 43.05 1.28
712 1476 9.042450 TGTCTCACACCTTCCTTCTTAATAATA 57.958 33.333 0.00 0.00 0.00 0.98
713 1477 9.886132 GTCTCACACCTTCCTTCTTAATAATAA 57.114 33.333 0.00 0.00 0.00 1.40
716 1480 9.120538 TCACACCTTCCTTCTTAATAATAATGC 57.879 33.333 0.00 0.00 0.00 3.56
717 1481 8.352942 CACACCTTCCTTCTTAATAATAATGCC 58.647 37.037 0.00 0.00 0.00 4.40
718 1482 7.228706 ACACCTTCCTTCTTAATAATAATGCCG 59.771 37.037 0.00 0.00 0.00 5.69
719 1483 6.206829 ACCTTCCTTCTTAATAATAATGCCGC 59.793 38.462 0.00 0.00 0.00 6.53
720 1484 6.206634 CCTTCCTTCTTAATAATAATGCCGCA 59.793 38.462 0.00 0.00 0.00 5.69
721 1485 6.801539 TCCTTCTTAATAATAATGCCGCAG 57.198 37.500 0.00 0.00 0.00 5.18
777 1541 7.352079 ACTCTGAAACCAAGAACAAATTCAT 57.648 32.000 0.00 0.00 37.29 2.57
780 1544 7.555087 TCTGAAACCAAGAACAAATTCATGTT 58.445 30.769 0.00 0.00 45.82 2.71
822 1624 0.535335 TTCACTACCCTGCACGATCC 59.465 55.000 0.00 0.00 0.00 3.36
833 1635 1.153823 CACGATCCCACGACTCACC 60.154 63.158 0.00 0.00 37.03 4.02
854 1656 0.171007 GCACCACCAATGACCAATCG 59.829 55.000 0.00 0.00 0.00 3.34
855 1657 0.171007 CACCACCAATGACCAATCGC 59.829 55.000 0.00 0.00 0.00 4.58
861 1663 3.009723 ACCAATGACCAATCGCAAGTAG 58.990 45.455 0.00 0.00 39.48 2.57
862 1664 3.009723 CCAATGACCAATCGCAAGTAGT 58.990 45.455 0.00 0.00 39.48 2.73
863 1665 4.188462 CCAATGACCAATCGCAAGTAGTA 58.812 43.478 0.00 0.00 39.48 1.82
918 1720 3.358111 TCCAGAAAACACCACTCAACA 57.642 42.857 0.00 0.00 0.00 3.33
919 1721 3.278574 TCCAGAAAACACCACTCAACAG 58.721 45.455 0.00 0.00 0.00 3.16
920 1722 3.016736 CCAGAAAACACCACTCAACAGT 58.983 45.455 0.00 0.00 0.00 3.55
921 1723 3.065371 CCAGAAAACACCACTCAACAGTC 59.935 47.826 0.00 0.00 0.00 3.51
922 1724 3.689161 CAGAAAACACCACTCAACAGTCA 59.311 43.478 0.00 0.00 0.00 3.41
923 1725 4.155826 CAGAAAACACCACTCAACAGTCAA 59.844 41.667 0.00 0.00 0.00 3.18
924 1726 4.156008 AGAAAACACCACTCAACAGTCAAC 59.844 41.667 0.00 0.00 0.00 3.18
975 1779 2.186125 CTCATCAGCGAGCCAGCA 59.814 61.111 3.80 0.00 40.15 4.41
981 1785 2.359230 AGCGAGCCAGCAACCTTC 60.359 61.111 3.80 0.00 40.15 3.46
1026 1830 2.433994 GCTGGCTCTCCTCCTCCTG 61.434 68.421 0.00 0.00 0.00 3.86
1604 2408 2.325393 AATTCCCCGTCCTCCGATGC 62.325 60.000 0.00 0.00 39.56 3.91
1857 2661 1.464376 CGCCGGACCTCTACATCCAT 61.464 60.000 5.05 0.00 34.35 3.41
2049 2853 2.710902 CGACATCGAGCTCACCCCA 61.711 63.158 15.40 0.00 43.02 4.96
2055 2859 1.153289 CGAGCTCACCCCATTCCTG 60.153 63.158 15.40 0.00 0.00 3.86
2223 3027 3.461773 CTGTCCATCTCCCGCCGT 61.462 66.667 0.00 0.00 0.00 5.68
2240 3044 2.028337 TTACACGACGCAGCTGCA 59.972 55.556 36.03 14.08 42.21 4.41
2369 3173 1.070786 GCCTGGTCGAGTTCACCAA 59.929 57.895 0.00 0.00 43.56 3.67
2370 3174 0.951040 GCCTGGTCGAGTTCACCAAG 60.951 60.000 0.00 0.00 43.56 3.61
2554 3358 2.930562 GGAGCCTGTCCCACACCT 60.931 66.667 0.00 0.00 39.88 4.00
2874 3678 1.709147 GCTGGGTCTACATTGCTGCG 61.709 60.000 0.00 0.00 0.00 5.18
2978 3802 0.732571 CCACATTATGTCCGGTGCAC 59.267 55.000 8.80 8.80 0.00 4.57
3002 3826 8.916654 CACTCTTGTTGTTCTTGTATACTGTAG 58.083 37.037 4.17 0.00 0.00 2.74
3102 6969 4.935205 TCTATTGCTGTGTGTAGCGATTTT 59.065 37.500 5.87 0.00 43.61 1.82
3123 6992 9.431887 GATTTTGTGTGAGTACCTCTTTGTATA 57.568 33.333 0.00 0.00 0.00 1.47
3167 7036 5.470368 GTGGAGACGCTATTATGATGCTTA 58.530 41.667 0.00 0.00 38.02 3.09
3218 7088 6.220930 TGTATGTCTTGTTGGTCAGTAAGTC 58.779 40.000 0.00 0.00 0.00 3.01
3228 7098 2.035576 GGTCAGTAAGTCGGTGAGTGTT 59.964 50.000 0.00 0.00 0.00 3.32
3257 7127 7.230510 ACTCTCAGCTAAATATGACCTGTCTAG 59.769 40.741 0.00 0.00 0.00 2.43
3258 7128 7.290813 TCTCAGCTAAATATGACCTGTCTAGA 58.709 38.462 0.00 0.00 0.00 2.43
3259 7129 7.780271 TCTCAGCTAAATATGACCTGTCTAGAA 59.220 37.037 0.00 0.00 0.00 2.10
3260 7130 7.946207 TCAGCTAAATATGACCTGTCTAGAAG 58.054 38.462 0.00 0.00 0.00 2.85
3261 7131 6.644592 CAGCTAAATATGACCTGTCTAGAAGC 59.355 42.308 0.00 0.00 0.00 3.86
3262 7132 5.631512 GCTAAATATGACCTGTCTAGAAGCG 59.368 44.000 0.00 0.00 0.00 4.68
3265 7135 5.854010 ATATGACCTGTCTAGAAGCGAAA 57.146 39.130 0.00 0.00 0.00 3.46
3268 7138 3.057456 TGACCTGTCTAGAAGCGAAAGTC 60.057 47.826 0.00 0.00 0.00 3.01
3269 7139 2.891580 ACCTGTCTAGAAGCGAAAGTCA 59.108 45.455 0.00 0.00 0.00 3.41
3270 7140 3.511934 ACCTGTCTAGAAGCGAAAGTCAT 59.488 43.478 0.00 0.00 0.00 3.06
3272 7142 5.361285 ACCTGTCTAGAAGCGAAAGTCATAT 59.639 40.000 0.00 0.00 0.00 1.78
3275 7145 7.278868 CCTGTCTAGAAGCGAAAGTCATATTTT 59.721 37.037 0.00 0.00 0.00 1.82
3276 7146 7.963981 TGTCTAGAAGCGAAAGTCATATTTTG 58.036 34.615 0.00 0.00 0.00 2.44
3277 7147 7.817478 TGTCTAGAAGCGAAAGTCATATTTTGA 59.183 33.333 0.00 0.00 0.00 2.69
3287 7157 3.644966 TCATATTTTGACCCCGAGCTT 57.355 42.857 0.00 0.00 0.00 3.74
3289 7159 5.304686 TCATATTTTGACCCCGAGCTTAT 57.695 39.130 0.00 0.00 0.00 1.73
3290 7160 6.428083 TCATATTTTGACCCCGAGCTTATA 57.572 37.500 0.00 0.00 0.00 0.98
3291 7161 7.016153 TCATATTTTGACCCCGAGCTTATAT 57.984 36.000 0.00 0.00 0.00 0.86
3292 7162 6.878923 TCATATTTTGACCCCGAGCTTATATG 59.121 38.462 0.00 0.00 0.00 1.78
3305 7175 4.392940 AGCTTATATGCTCCCACATGAAC 58.607 43.478 7.29 0.00 39.34 3.18
3306 7176 4.136796 GCTTATATGCTCCCACATGAACA 58.863 43.478 0.00 0.00 0.00 3.18
3307 7177 4.214971 GCTTATATGCTCCCACATGAACAG 59.785 45.833 0.00 0.00 0.00 3.16
3308 7178 3.939740 ATATGCTCCCACATGAACAGT 57.060 42.857 0.00 0.00 0.00 3.55
3309 7179 6.493189 TTATATGCTCCCACATGAACAGTA 57.507 37.500 0.00 0.00 0.00 2.74
3311 7181 3.500448 TGCTCCCACATGAACAGTAAA 57.500 42.857 0.00 0.00 0.00 2.01
3313 7183 4.406456 TGCTCCCACATGAACAGTAAAAT 58.594 39.130 0.00 0.00 0.00 1.82
3314 7184 4.458989 TGCTCCCACATGAACAGTAAAATC 59.541 41.667 0.00 0.00 0.00 2.17
3315 7185 4.437390 GCTCCCACATGAACAGTAAAATCG 60.437 45.833 0.00 0.00 0.00 3.34
3316 7186 4.900684 TCCCACATGAACAGTAAAATCGA 58.099 39.130 0.00 0.00 0.00 3.59
3317 7187 5.496556 TCCCACATGAACAGTAAAATCGAT 58.503 37.500 0.00 0.00 0.00 3.59
3318 7188 5.943416 TCCCACATGAACAGTAAAATCGATT 59.057 36.000 4.39 4.39 0.00 3.34
3319 7189 6.432783 TCCCACATGAACAGTAAAATCGATTT 59.567 34.615 17.60 17.60 34.92 2.17
3320 7190 7.040062 TCCCACATGAACAGTAAAATCGATTTT 60.040 33.333 32.16 32.16 42.21 1.82
3378 7248 8.687824 TTTGAGAGAAACATTGACAAAAGTTC 57.312 30.769 9.09 5.33 0.00 3.01
3380 7250 8.731275 TGAGAGAAACATTGACAAAAGTTCTA 57.269 30.769 9.09 0.00 0.00 2.10
3381 7251 9.173021 TGAGAGAAACATTGACAAAAGTTCTAA 57.827 29.630 9.09 0.00 0.00 2.10
3382 7252 9.657121 GAGAGAAACATTGACAAAAGTTCTAAG 57.343 33.333 9.09 0.00 0.00 2.18
3385 7255 7.702348 AGAAACATTGACAAAAGTTCTAAGTGC 59.298 33.333 9.09 0.00 0.00 4.40
3386 7256 5.831997 ACATTGACAAAAGTTCTAAGTGCC 58.168 37.500 0.00 0.00 0.00 5.01
3387 7257 5.594317 ACATTGACAAAAGTTCTAAGTGCCT 59.406 36.000 0.00 0.00 0.00 4.75
3388 7258 5.499139 TTGACAAAAGTTCTAAGTGCCTG 57.501 39.130 0.00 0.00 0.00 4.85
3389 7259 3.315191 TGACAAAAGTTCTAAGTGCCTGC 59.685 43.478 0.00 0.00 0.00 4.85
3391 7261 3.699038 ACAAAAGTTCTAAGTGCCTGCAA 59.301 39.130 0.00 0.00 0.00 4.08
3392 7262 4.159506 ACAAAAGTTCTAAGTGCCTGCAAA 59.840 37.500 0.00 0.00 0.00 3.68
3394 7264 5.337578 AAAGTTCTAAGTGCCTGCAAAAA 57.662 34.783 0.00 0.00 0.00 1.94
3396 7266 5.535753 AGTTCTAAGTGCCTGCAAAAATT 57.464 34.783 0.00 0.00 0.00 1.82
3397 7267 5.532557 AGTTCTAAGTGCCTGCAAAAATTC 58.467 37.500 0.00 0.00 0.00 2.17
3398 7268 5.068987 AGTTCTAAGTGCCTGCAAAAATTCA 59.931 36.000 0.00 0.00 0.00 2.57
3399 7269 5.726980 TCTAAGTGCCTGCAAAAATTCAT 57.273 34.783 0.00 0.00 0.00 2.57
3400 7270 5.713025 TCTAAGTGCCTGCAAAAATTCATC 58.287 37.500 0.00 0.00 0.00 2.92
3401 7271 4.339872 AAGTGCCTGCAAAAATTCATCA 57.660 36.364 0.00 0.00 0.00 3.07
3402 7272 4.546829 AGTGCCTGCAAAAATTCATCAT 57.453 36.364 0.00 0.00 0.00 2.45
3403 7273 4.250464 AGTGCCTGCAAAAATTCATCATG 58.750 39.130 0.00 0.00 0.00 3.07
3404 7274 4.020928 AGTGCCTGCAAAAATTCATCATGA 60.021 37.500 0.00 0.00 0.00 3.07
3405 7275 4.691685 GTGCCTGCAAAAATTCATCATGAA 59.308 37.500 1.59 1.59 41.09 2.57
3406 7276 5.179742 GTGCCTGCAAAAATTCATCATGAAA 59.820 36.000 3.63 0.00 40.12 2.69
3407 7277 5.941058 TGCCTGCAAAAATTCATCATGAAAT 59.059 32.000 3.63 0.00 40.12 2.17
3408 7278 6.092944 TGCCTGCAAAAATTCATCATGAAATC 59.907 34.615 3.63 0.00 40.12 2.17
3409 7279 6.092944 GCCTGCAAAAATTCATCATGAAATCA 59.907 34.615 3.63 0.00 40.12 2.57
3410 7280 7.461107 CCTGCAAAAATTCATCATGAAATCAC 58.539 34.615 3.63 0.00 40.12 3.06
3411 7281 7.118535 CCTGCAAAAATTCATCATGAAATCACA 59.881 33.333 3.63 0.00 40.12 3.58
3412 7282 8.554835 TGCAAAAATTCATCATGAAATCACAT 57.445 26.923 3.63 0.00 40.12 3.21
3413 7283 9.004717 TGCAAAAATTCATCATGAAATCACATT 57.995 25.926 3.63 0.00 40.12 2.71
3414 7284 9.485591 GCAAAAATTCATCATGAAATCACATTC 57.514 29.630 3.63 0.00 40.12 2.67
3415 7285 9.982291 CAAAAATTCATCATGAAATCACATTCC 57.018 29.630 3.63 0.00 40.12 3.01
3416 7286 9.953565 AAAAATTCATCATGAAATCACATTCCT 57.046 25.926 3.63 0.00 40.12 3.36
3417 7287 8.942338 AAATTCATCATGAAATCACATTCCTG 57.058 30.769 3.63 0.00 40.12 3.86
3418 7288 7.655521 ATTCATCATGAAATCACATTCCTGT 57.344 32.000 3.63 0.00 40.12 4.00
3419 7289 8.756486 ATTCATCATGAAATCACATTCCTGTA 57.244 30.769 3.63 0.00 40.12 2.74
3420 7290 8.578448 TTCATCATGAAATCACATTCCTGTAA 57.422 30.769 0.00 0.00 32.71 2.41
3421 7291 8.217131 TCATCATGAAATCACATTCCTGTAAG 57.783 34.615 0.00 0.00 33.14 2.34
3432 7302 4.693532 CTGTAAGGCGTGGCAAGA 57.306 55.556 4.11 0.00 0.00 3.02
3433 7303 2.927004 CTGTAAGGCGTGGCAAGAA 58.073 52.632 4.11 0.00 0.00 2.52
3434 7304 0.798776 CTGTAAGGCGTGGCAAGAAG 59.201 55.000 4.11 0.00 0.00 2.85
3435 7305 0.394938 TGTAAGGCGTGGCAAGAAGA 59.605 50.000 4.11 0.00 0.00 2.87
3436 7306 1.202710 TGTAAGGCGTGGCAAGAAGAA 60.203 47.619 4.11 0.00 0.00 2.52
3437 7307 1.877443 GTAAGGCGTGGCAAGAAGAAA 59.123 47.619 4.11 0.00 0.00 2.52
3438 7308 1.398692 AAGGCGTGGCAAGAAGAAAA 58.601 45.000 4.11 0.00 0.00 2.29
3439 7309 1.398692 AGGCGTGGCAAGAAGAAAAA 58.601 45.000 4.11 0.00 0.00 1.94
3461 7331 4.977741 AAATTCAGTGCTTCAAAATGCG 57.022 36.364 0.00 0.00 0.00 4.73
3462 7332 3.648339 ATTCAGTGCTTCAAAATGCGT 57.352 38.095 0.00 0.00 0.00 5.24
3463 7333 3.435105 TTCAGTGCTTCAAAATGCGTT 57.565 38.095 0.00 0.00 0.00 4.84
3464 7334 3.435105 TCAGTGCTTCAAAATGCGTTT 57.565 38.095 0.00 0.00 0.00 3.60
3465 7335 3.114809 TCAGTGCTTCAAAATGCGTTTG 58.885 40.909 4.29 5.51 46.86 2.93
3477 7347 6.902224 AAAATGCGTTTGAAAGTAGCTTTT 57.098 29.167 4.29 0.00 36.97 2.27
3478 7348 6.902224 AAATGCGTTTGAAAGTAGCTTTTT 57.098 29.167 2.32 0.00 33.49 1.94
3479 7349 6.510746 AATGCGTTTGAAAGTAGCTTTTTC 57.489 33.333 13.56 13.56 33.49 2.29
3480 7350 4.987832 TGCGTTTGAAAGTAGCTTTTTCA 58.012 34.783 17.30 17.30 41.40 2.69
3481 7351 5.034152 TGCGTTTGAAAGTAGCTTTTTCAG 58.966 37.500 19.21 12.77 43.22 3.02
3482 7352 5.163703 TGCGTTTGAAAGTAGCTTTTTCAGA 60.164 36.000 19.21 15.01 43.22 3.27
3483 7353 5.396654 GCGTTTGAAAGTAGCTTTTTCAGAG 59.603 40.000 19.21 16.17 43.22 3.35
3484 7354 6.487103 CGTTTGAAAGTAGCTTTTTCAGAGT 58.513 36.000 19.21 0.00 43.22 3.24
3485 7355 7.627340 CGTTTGAAAGTAGCTTTTTCAGAGTA 58.373 34.615 19.21 8.08 43.22 2.59
3486 7356 7.583040 CGTTTGAAAGTAGCTTTTTCAGAGTAC 59.417 37.037 19.21 15.67 43.22 2.73
3487 7357 8.613482 GTTTGAAAGTAGCTTTTTCAGAGTACT 58.387 33.333 19.21 0.00 43.22 2.73
3488 7358 7.715265 TGAAAGTAGCTTTTTCAGAGTACTG 57.285 36.000 17.30 0.00 39.05 2.74
3489 7359 7.272978 TGAAAGTAGCTTTTTCAGAGTACTGT 58.727 34.615 17.30 0.00 39.05 3.55
3490 7360 7.769044 TGAAAGTAGCTTTTTCAGAGTACTGTT 59.231 33.333 17.30 0.00 39.05 3.16
3491 7361 8.507524 AAAGTAGCTTTTTCAGAGTACTGTTT 57.492 30.769 0.00 0.00 36.62 2.83
3492 7362 8.507524 AAGTAGCTTTTTCAGAGTACTGTTTT 57.492 30.769 0.00 0.00 43.81 2.43
3493 7363 8.507524 AGTAGCTTTTTCAGAGTACTGTTTTT 57.492 30.769 0.00 0.00 43.81 1.94
3494 7364 8.398665 AGTAGCTTTTTCAGAGTACTGTTTTTG 58.601 33.333 0.00 0.00 43.81 2.44
3495 7365 7.158099 AGCTTTTTCAGAGTACTGTTTTTGT 57.842 32.000 0.00 0.00 43.81 2.83
3496 7366 7.602753 AGCTTTTTCAGAGTACTGTTTTTGTT 58.397 30.769 0.00 0.00 43.81 2.83
3497 7367 8.088365 AGCTTTTTCAGAGTACTGTTTTTGTTT 58.912 29.630 0.00 0.00 43.81 2.83
3498 7368 8.708742 GCTTTTTCAGAGTACTGTTTTTGTTTT 58.291 29.630 0.00 0.00 43.81 2.43
3516 7386 1.243902 TTTTTGCCACGCCTTCTAGG 58.756 50.000 0.00 0.00 38.80 3.02
3517 7387 0.398696 TTTTGCCACGCCTTCTAGGA 59.601 50.000 0.00 0.00 37.67 2.94
3518 7388 0.398696 TTTGCCACGCCTTCTAGGAA 59.601 50.000 0.00 0.00 37.67 3.36
3519 7389 0.618458 TTGCCACGCCTTCTAGGAAT 59.382 50.000 0.00 0.00 37.67 3.01
3520 7390 0.107703 TGCCACGCCTTCTAGGAATG 60.108 55.000 0.00 0.00 37.67 2.67
3521 7391 0.107654 GCCACGCCTTCTAGGAATGT 60.108 55.000 0.00 0.00 37.67 2.71
3522 7392 1.656652 CCACGCCTTCTAGGAATGTG 58.343 55.000 0.00 2.20 37.67 3.21
3523 7393 1.207089 CCACGCCTTCTAGGAATGTGA 59.793 52.381 12.05 0.00 37.67 3.58
3524 7394 2.158900 CCACGCCTTCTAGGAATGTGAT 60.159 50.000 12.05 0.00 37.67 3.06
3525 7395 3.535561 CACGCCTTCTAGGAATGTGATT 58.464 45.455 0.00 0.00 37.67 2.57
3526 7396 3.941483 CACGCCTTCTAGGAATGTGATTT 59.059 43.478 0.00 0.00 37.67 2.17
3527 7397 4.034510 CACGCCTTCTAGGAATGTGATTTC 59.965 45.833 0.00 0.00 37.67 2.17
3528 7398 4.191544 CGCCTTCTAGGAATGTGATTTCA 58.808 43.478 0.00 0.00 37.67 2.69
3529 7399 4.818546 CGCCTTCTAGGAATGTGATTTCAT 59.181 41.667 0.00 0.00 37.67 2.57
3530 7400 5.277683 CGCCTTCTAGGAATGTGATTTCATG 60.278 44.000 0.00 0.00 37.67 3.07
3531 7401 5.824624 GCCTTCTAGGAATGTGATTTCATGA 59.175 40.000 0.00 0.00 37.67 3.07
3532 7402 6.238593 GCCTTCTAGGAATGTGATTTCATGAC 60.239 42.308 0.00 0.00 37.67 3.06
3533 7403 6.018425 CCTTCTAGGAATGTGATTTCATGACG 60.018 42.308 0.00 0.00 37.67 4.35
3534 7404 6.220726 TCTAGGAATGTGATTTCATGACGA 57.779 37.500 0.00 0.00 0.00 4.20
3535 7405 6.639563 TCTAGGAATGTGATTTCATGACGAA 58.360 36.000 0.00 0.00 0.00 3.85
3536 7406 7.275183 TCTAGGAATGTGATTTCATGACGAAT 58.725 34.615 0.00 0.00 32.32 3.34
3537 7407 6.764308 AGGAATGTGATTTCATGACGAATT 57.236 33.333 0.00 0.00 32.32 2.17
3538 7408 7.161773 AGGAATGTGATTTCATGACGAATTT 57.838 32.000 0.00 0.00 32.32 1.82
3539 7409 7.605449 AGGAATGTGATTTCATGACGAATTTT 58.395 30.769 0.00 0.00 32.32 1.82
3540 7410 8.090214 AGGAATGTGATTTCATGACGAATTTTT 58.910 29.630 0.00 0.00 32.32 1.94
3541 7411 8.164153 GGAATGTGATTTCATGACGAATTTTTG 58.836 33.333 0.00 0.00 32.32 2.44
3542 7412 6.450845 TGTGATTTCATGACGAATTTTTGC 57.549 33.333 0.00 0.00 32.32 3.68
3543 7413 5.981915 TGTGATTTCATGACGAATTTTTGCA 59.018 32.000 0.00 0.00 32.32 4.08
3544 7414 6.144241 TGTGATTTCATGACGAATTTTTGCAG 59.856 34.615 0.00 0.00 32.32 4.41
3545 7415 5.634439 TGATTTCATGACGAATTTTTGCAGG 59.366 36.000 0.00 0.00 32.32 4.85
3546 7416 4.844998 TTCATGACGAATTTTTGCAGGA 57.155 36.364 0.00 0.00 0.00 3.86
3547 7417 4.844998 TCATGACGAATTTTTGCAGGAA 57.155 36.364 0.00 0.00 0.00 3.36
3548 7418 4.545610 TCATGACGAATTTTTGCAGGAAC 58.454 39.130 0.00 0.00 0.00 3.62
3549 7419 4.278170 TCATGACGAATTTTTGCAGGAACT 59.722 37.500 0.00 0.00 43.88 3.01
3550 7420 4.647424 TGACGAATTTTTGCAGGAACTT 57.353 36.364 0.00 0.00 34.60 2.66
3551 7421 5.759506 TGACGAATTTTTGCAGGAACTTA 57.240 34.783 0.00 0.00 34.60 2.24
3552 7422 5.757886 TGACGAATTTTTGCAGGAACTTAG 58.242 37.500 0.00 0.00 34.60 2.18
3553 7423 5.529430 TGACGAATTTTTGCAGGAACTTAGA 59.471 36.000 0.00 0.00 34.60 2.10
3554 7424 6.038825 TGACGAATTTTTGCAGGAACTTAGAA 59.961 34.615 0.00 0.00 34.60 2.10
3555 7425 6.206498 ACGAATTTTTGCAGGAACTTAGAAC 58.794 36.000 0.00 0.00 34.60 3.01
3556 7426 6.039382 ACGAATTTTTGCAGGAACTTAGAACT 59.961 34.615 0.00 0.00 34.60 3.01
3557 7427 6.918022 CGAATTTTTGCAGGAACTTAGAACTT 59.082 34.615 0.00 0.00 34.60 2.66
3558 7428 7.435192 CGAATTTTTGCAGGAACTTAGAACTTT 59.565 33.333 0.00 0.00 34.60 2.66
3559 7429 9.098355 GAATTTTTGCAGGAACTTAGAACTTTT 57.902 29.630 0.00 0.00 34.60 2.27
3560 7430 7.826260 TTTTTGCAGGAACTTAGAACTTTTG 57.174 32.000 0.00 0.00 34.60 2.44
3561 7431 6.524101 TTTGCAGGAACTTAGAACTTTTGT 57.476 33.333 0.00 0.00 34.60 2.83
3562 7432 5.751243 TGCAGGAACTTAGAACTTTTGTC 57.249 39.130 0.00 0.00 34.60 3.18
3563 7433 5.189928 TGCAGGAACTTAGAACTTTTGTCA 58.810 37.500 0.00 0.00 34.60 3.58
3564 7434 5.650266 TGCAGGAACTTAGAACTTTTGTCAA 59.350 36.000 0.00 0.00 34.60 3.18
3565 7435 6.321181 TGCAGGAACTTAGAACTTTTGTCAAT 59.679 34.615 0.00 0.00 34.60 2.57
3566 7436 6.638468 GCAGGAACTTAGAACTTTTGTCAATG 59.362 38.462 0.00 0.00 34.60 2.82
3567 7437 7.682021 GCAGGAACTTAGAACTTTTGTCAATGT 60.682 37.037 0.00 0.00 34.60 2.71
3568 7438 8.190784 CAGGAACTTAGAACTTTTGTCAATGTT 58.809 33.333 4.72 4.72 34.60 2.71
3569 7439 8.749354 AGGAACTTAGAACTTTTGTCAATGTTT 58.251 29.630 6.10 0.00 27.25 2.83
3570 7440 9.020813 GGAACTTAGAACTTTTGTCAATGTTTC 57.979 33.333 6.10 1.04 31.96 2.78
3571 7441 9.788960 GAACTTAGAACTTTTGTCAATGTTTCT 57.211 29.630 6.10 6.96 31.96 2.52
3572 7442 9.788960 AACTTAGAACTTTTGTCAATGTTTCTC 57.211 29.630 6.42 0.00 31.96 2.87
3573 7443 9.178758 ACTTAGAACTTTTGTCAATGTTTCTCT 57.821 29.630 6.42 3.36 31.96 3.10
3574 7444 9.657121 CTTAGAACTTTTGTCAATGTTTCTCTC 57.343 33.333 6.42 0.00 31.96 3.20
3575 7445 7.630242 AGAACTTTTGTCAATGTTTCTCTCA 57.370 32.000 6.10 0.00 31.96 3.27
3576 7446 8.055279 AGAACTTTTGTCAATGTTTCTCTCAA 57.945 30.769 6.10 0.00 31.96 3.02
3577 7447 8.522830 AGAACTTTTGTCAATGTTTCTCTCAAA 58.477 29.630 6.10 0.00 31.96 2.69
3578 7448 9.139174 GAACTTTTGTCAATGTTTCTCTCAAAA 57.861 29.630 6.10 0.00 31.96 2.44
3579 7449 9.487790 AACTTTTGTCAATGTTTCTCTCAAAAA 57.512 25.926 0.00 0.00 34.51 1.94
3632 7502 9.575783 TGATTTAGTTTTGGTTTTACTGTTCAC 57.424 29.630 0.00 0.00 0.00 3.18
3633 7503 8.936070 ATTTAGTTTTGGTTTTACTGTTCACC 57.064 30.769 0.00 0.00 0.00 4.02
3634 7504 5.333299 AGTTTTGGTTTTACTGTTCACCC 57.667 39.130 0.00 0.00 0.00 4.61
3635 7505 4.106909 GTTTTGGTTTTACTGTTCACCCG 58.893 43.478 0.00 0.00 0.00 5.28
3636 7506 3.278668 TTGGTTTTACTGTTCACCCGA 57.721 42.857 0.00 0.00 0.00 5.14
3637 7507 2.841215 TGGTTTTACTGTTCACCCGAG 58.159 47.619 0.00 0.00 0.00 4.63
3638 7508 1.534163 GGTTTTACTGTTCACCCGAGC 59.466 52.381 0.00 0.00 0.00 5.03
3639 7509 2.490991 GTTTTACTGTTCACCCGAGCT 58.509 47.619 0.00 0.00 0.00 4.09
3640 7510 2.450609 TTTACTGTTCACCCGAGCTC 57.549 50.000 2.73 2.73 0.00 4.09
3641 7511 1.334160 TTACTGTTCACCCGAGCTCA 58.666 50.000 15.40 0.00 0.00 4.26
3642 7512 1.557099 TACTGTTCACCCGAGCTCAT 58.443 50.000 15.40 0.00 0.00 2.90
3643 7513 0.687354 ACTGTTCACCCGAGCTCATT 59.313 50.000 15.40 0.00 0.00 2.57
3644 7514 1.072331 ACTGTTCACCCGAGCTCATTT 59.928 47.619 15.40 0.00 0.00 2.32
3645 7515 1.466167 CTGTTCACCCGAGCTCATTTG 59.534 52.381 15.40 6.81 0.00 2.32
3646 7516 1.071542 TGTTCACCCGAGCTCATTTGA 59.928 47.619 15.40 9.18 0.00 2.69
3647 7517 1.734465 GTTCACCCGAGCTCATTTGAG 59.266 52.381 15.40 3.13 44.75 3.02
3666 7536 1.006805 CTCGGGAGCAGATTAGCCG 60.007 63.158 0.00 0.00 34.23 5.52
3667 7537 2.663188 CGGGAGCAGATTAGCCGC 60.663 66.667 0.00 0.00 34.23 6.53
3668 7538 2.663188 GGGAGCAGATTAGCCGCG 60.663 66.667 0.00 0.00 34.23 6.46
3669 7539 2.107141 GGAGCAGATTAGCCGCGT 59.893 61.111 4.92 0.00 34.23 6.01
3670 7540 1.951631 GGAGCAGATTAGCCGCGTC 60.952 63.158 4.92 0.00 34.23 5.19
3671 7541 2.278857 AGCAGATTAGCCGCGTCG 60.279 61.111 4.92 0.00 34.23 5.12
3672 7542 2.582498 GCAGATTAGCCGCGTCGT 60.582 61.111 4.92 0.00 0.00 4.34
3673 7543 2.860628 GCAGATTAGCCGCGTCGTG 61.861 63.158 4.92 0.00 0.00 4.35
3674 7544 1.516386 CAGATTAGCCGCGTCGTGT 60.516 57.895 4.92 0.00 0.00 4.49
3675 7545 1.226603 AGATTAGCCGCGTCGTGTC 60.227 57.895 4.92 0.00 0.00 3.67
3676 7546 1.226603 GATTAGCCGCGTCGTGTCT 60.227 57.895 4.92 0.00 0.00 3.41
3677 7547 0.028505 GATTAGCCGCGTCGTGTCTA 59.971 55.000 4.92 0.00 0.00 2.59
3678 7548 0.029035 ATTAGCCGCGTCGTGTCTAG 59.971 55.000 4.92 0.00 0.00 2.43
3679 7549 1.020861 TTAGCCGCGTCGTGTCTAGA 61.021 55.000 4.92 0.00 0.00 2.43
3680 7550 1.426816 TAGCCGCGTCGTGTCTAGAG 61.427 60.000 4.92 0.00 0.00 2.43
3681 7551 2.747822 GCCGCGTCGTGTCTAGAGA 61.748 63.158 4.92 0.00 0.00 3.10
3682 7552 1.348938 CCGCGTCGTGTCTAGAGAG 59.651 63.158 4.92 0.00 0.00 3.20
3683 7553 1.297012 CGCGTCGTGTCTAGAGAGC 60.297 63.158 0.00 0.00 0.00 4.09
3684 7554 1.062845 GCGTCGTGTCTAGAGAGCC 59.937 63.158 0.00 0.00 0.00 4.70
3685 7555 1.370587 GCGTCGTGTCTAGAGAGCCT 61.371 60.000 0.00 0.00 0.00 4.58
3686 7556 1.088306 CGTCGTGTCTAGAGAGCCTT 58.912 55.000 0.00 0.00 0.00 4.35
3687 7557 1.062880 CGTCGTGTCTAGAGAGCCTTC 59.937 57.143 0.00 0.00 0.00 3.46
3688 7558 2.361789 GTCGTGTCTAGAGAGCCTTCT 58.638 52.381 0.00 0.00 36.01 2.85
3689 7559 2.750712 GTCGTGTCTAGAGAGCCTTCTT 59.249 50.000 0.00 0.00 32.53 2.52
3690 7560 2.750166 TCGTGTCTAGAGAGCCTTCTTG 59.250 50.000 0.00 0.00 32.53 3.02
3691 7561 2.750166 CGTGTCTAGAGAGCCTTCTTGA 59.250 50.000 0.00 0.00 32.53 3.02
3692 7562 3.380004 CGTGTCTAGAGAGCCTTCTTGAT 59.620 47.826 0.00 0.00 32.92 2.57
3693 7563 4.681744 GTGTCTAGAGAGCCTTCTTGATG 58.318 47.826 0.00 0.00 32.92 3.07
3694 7564 3.131933 TGTCTAGAGAGCCTTCTTGATGC 59.868 47.826 0.00 0.00 32.92 3.91
3695 7565 3.131933 GTCTAGAGAGCCTTCTTGATGCA 59.868 47.826 0.00 0.00 32.92 3.96
3696 7566 3.771479 TCTAGAGAGCCTTCTTGATGCAA 59.229 43.478 0.00 0.00 32.53 4.08
3697 7567 2.988570 AGAGAGCCTTCTTGATGCAAG 58.011 47.619 0.00 0.84 42.25 4.01
3698 7568 1.401199 GAGAGCCTTCTTGATGCAAGC 59.599 52.381 0.00 0.00 40.84 4.01
3699 7569 1.171308 GAGCCTTCTTGATGCAAGCA 58.829 50.000 0.00 0.00 40.84 3.91
3700 7570 1.542915 GAGCCTTCTTGATGCAAGCAA 59.457 47.619 0.00 0.00 41.67 3.91
3701 7571 1.965643 AGCCTTCTTGATGCAAGCAAA 59.034 42.857 0.00 0.00 44.21 3.68
3702 7572 2.565834 AGCCTTCTTGATGCAAGCAAAT 59.434 40.909 0.00 0.00 44.21 2.32
3703 7573 2.671396 GCCTTCTTGATGCAAGCAAATG 59.329 45.455 0.00 0.00 44.21 2.32
3704 7574 2.671396 CCTTCTTGATGCAAGCAAATGC 59.329 45.455 0.00 0.00 44.21 3.56
3724 7594 2.593978 CTGCATCACAGGGAGGGG 59.406 66.667 0.00 0.00 43.19 4.79
3725 7595 3.016971 TGCATCACAGGGAGGGGG 61.017 66.667 0.00 0.00 0.00 5.40
3726 7596 2.692368 GCATCACAGGGAGGGGGA 60.692 66.667 0.00 0.00 0.00 4.81
3727 7597 2.081161 GCATCACAGGGAGGGGGAT 61.081 63.158 0.00 0.00 0.00 3.85
3728 7598 0.768221 GCATCACAGGGAGGGGGATA 60.768 60.000 0.00 0.00 0.00 2.59
3729 7599 1.059913 CATCACAGGGAGGGGGATAC 58.940 60.000 0.00 0.00 0.00 2.24
3755 7625 3.983533 AGAGGAGGCTGGACTATTACT 57.016 47.619 0.00 0.00 0.00 2.24
3756 7626 4.273300 AGAGGAGGCTGGACTATTACTT 57.727 45.455 0.00 0.00 0.00 2.24
3758 7628 5.390387 AGAGGAGGCTGGACTATTACTTAG 58.610 45.833 0.00 0.00 0.00 2.18
3762 7632 5.220710 AGGCTGGACTATTACTTAGCATG 57.779 43.478 0.00 0.00 33.05 4.06
3763 7633 4.901849 AGGCTGGACTATTACTTAGCATGA 59.098 41.667 0.00 0.00 33.05 3.07
3764 7634 5.366768 AGGCTGGACTATTACTTAGCATGAA 59.633 40.000 0.00 0.00 33.05 2.57
3765 7635 6.055588 GGCTGGACTATTACTTAGCATGAAA 58.944 40.000 0.00 0.00 33.05 2.69
3766 7636 6.712547 GGCTGGACTATTACTTAGCATGAAAT 59.287 38.462 0.00 0.00 33.05 2.17
3767 7637 7.878127 GGCTGGACTATTACTTAGCATGAAATA 59.122 37.037 0.00 0.00 33.05 1.40
3768 7638 8.713271 GCTGGACTATTACTTAGCATGAAATAC 58.287 37.037 0.00 0.00 0.00 1.89
3769 7639 9.209175 CTGGACTATTACTTAGCATGAAATACC 57.791 37.037 0.00 0.00 0.00 2.73
3770 7640 8.934697 TGGACTATTACTTAGCATGAAATACCT 58.065 33.333 0.00 0.00 0.00 3.08
3782 7652 8.618702 AGCATGAAATACCTATTCTGAATCAG 57.381 34.615 6.10 3.38 0.00 2.90
3783 7653 7.664731 AGCATGAAATACCTATTCTGAATCAGG 59.335 37.037 10.71 13.41 31.51 3.86
3784 7654 7.446625 GCATGAAATACCTATTCTGAATCAGGT 59.553 37.037 23.01 23.01 43.73 4.00
3785 7655 9.347240 CATGAAATACCTATTCTGAATCAGGTT 57.653 33.333 23.88 13.96 41.60 3.50
3786 7656 9.927081 ATGAAATACCTATTCTGAATCAGGTTT 57.073 29.630 23.88 17.88 41.60 3.27
3787 7657 9.177608 TGAAATACCTATTCTGAATCAGGTTTG 57.822 33.333 23.88 0.00 41.60 2.93
3788 7658 8.525290 AAATACCTATTCTGAATCAGGTTTGG 57.475 34.615 23.88 10.51 41.60 3.28
3789 7659 4.273318 ACCTATTCTGAATCAGGTTTGGC 58.727 43.478 10.71 0.00 38.23 4.52
3790 7660 3.313526 CCTATTCTGAATCAGGTTTGGCG 59.686 47.826 10.71 0.00 31.51 5.69
3791 7661 2.270352 TTCTGAATCAGGTTTGGCGT 57.730 45.000 10.71 0.00 31.51 5.68
3792 7662 1.808411 TCTGAATCAGGTTTGGCGTC 58.192 50.000 10.71 0.00 31.51 5.19
3793 7663 1.071542 TCTGAATCAGGTTTGGCGTCA 59.928 47.619 10.71 0.00 31.51 4.35
3794 7664 1.879380 CTGAATCAGGTTTGGCGTCAA 59.121 47.619 0.00 0.00 0.00 3.18
3795 7665 2.293122 CTGAATCAGGTTTGGCGTCAAA 59.707 45.455 11.91 11.91 40.23 2.69
3796 7666 2.690497 TGAATCAGGTTTGGCGTCAAAA 59.310 40.909 18.12 1.28 43.56 2.44
3797 7667 3.320541 TGAATCAGGTTTGGCGTCAAAAT 59.679 39.130 18.12 6.18 43.56 1.82
3798 7668 4.520874 TGAATCAGGTTTGGCGTCAAAATA 59.479 37.500 18.12 3.31 43.56 1.40
3799 7669 3.907894 TCAGGTTTGGCGTCAAAATAC 57.092 42.857 18.12 10.62 43.56 1.89
3800 7670 2.554893 TCAGGTTTGGCGTCAAAATACC 59.445 45.455 18.12 15.29 43.56 2.73
3801 7671 2.294791 CAGGTTTGGCGTCAAAATACCA 59.705 45.455 18.12 0.00 43.56 3.25
3802 7672 3.056891 CAGGTTTGGCGTCAAAATACCAT 60.057 43.478 18.12 0.00 43.56 3.55
3803 7673 3.576550 AGGTTTGGCGTCAAAATACCATT 59.423 39.130 18.12 0.00 43.56 3.16
3804 7674 3.677596 GGTTTGGCGTCAAAATACCATTG 59.322 43.478 18.12 0.00 43.56 2.82
3805 7675 2.645730 TGGCGTCAAAATACCATTGC 57.354 45.000 0.00 0.00 0.00 3.56
3806 7676 2.166829 TGGCGTCAAAATACCATTGCT 58.833 42.857 0.00 0.00 0.00 3.91
3807 7677 2.560542 TGGCGTCAAAATACCATTGCTT 59.439 40.909 0.00 0.00 0.00 3.91
3808 7678 3.179048 GGCGTCAAAATACCATTGCTTC 58.821 45.455 0.00 0.00 0.00 3.86
3809 7679 2.845967 GCGTCAAAATACCATTGCTTCG 59.154 45.455 0.00 0.00 0.00 3.79
3810 7680 3.425625 GCGTCAAAATACCATTGCTTCGA 60.426 43.478 0.00 0.00 0.00 3.71
3811 7681 4.334443 CGTCAAAATACCATTGCTTCGAG 58.666 43.478 0.00 0.00 0.00 4.04
3839 7709 1.001633 CATTTGCTTGGAGGCTGCTTT 59.998 47.619 7.74 0.00 0.00 3.51
3843 7713 1.174712 GCTTGGAGGCTGCTTTGACA 61.175 55.000 7.74 0.00 0.00 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.601019 CAAGCAACACAGTCGAAGAAATT 58.399 39.130 0.00 0.00 39.69 1.82
16 17 1.571460 CGAGGCAAGCAACACAGTC 59.429 57.895 0.00 0.00 0.00 3.51
26 27 1.023513 CCTGAAAGAGCCGAGGCAAG 61.024 60.000 17.18 3.87 44.88 4.01
34 35 3.740115 TGTGAGTAAACCTGAAAGAGCC 58.260 45.455 0.00 0.00 34.07 4.70
42 43 4.225267 ACCCTAGGAATGTGAGTAAACCTG 59.775 45.833 11.48 0.00 0.00 4.00
67 68 6.524734 CAAGAGAATGGGCTAAAAGGTTTTT 58.475 36.000 0.00 0.00 0.00 1.94
72 73 3.359950 AGCAAGAGAATGGGCTAAAAGG 58.640 45.455 0.00 0.00 34.25 3.11
184 189 7.173390 GGCTGCTCTATGTAATTTAGTTAAGGG 59.827 40.741 0.00 0.00 0.00 3.95
254 259 5.354234 ACTCCTGGAAGCATTTACATTTACG 59.646 40.000 0.00 0.00 0.00 3.18
303 308 7.905265 TCAAAATCAAAAGAAATGCCCATAGA 58.095 30.769 0.00 0.00 0.00 1.98
376 401 4.906618 ACATTGGAGTATCAAACCGAGTT 58.093 39.130 0.00 0.00 36.25 3.01
377 402 4.504858 GACATTGGAGTATCAAACCGAGT 58.495 43.478 0.00 0.00 36.25 4.18
379 404 3.517901 AGGACATTGGAGTATCAAACCGA 59.482 43.478 0.00 0.00 36.25 4.69
429 637 5.065346 CAGCTAGTAGAAGATCGACACTTGA 59.935 44.000 10.70 0.00 0.00 3.02
437 654 4.829064 AAGAGCAGCTAGTAGAAGATCG 57.171 45.455 0.00 0.00 0.00 3.69
468 688 3.491619 GGCATTACATCGAGAAGCTCTGA 60.492 47.826 0.00 0.00 0.00 3.27
471 691 2.799412 CTGGCATTACATCGAGAAGCTC 59.201 50.000 0.00 0.00 0.00 4.09
535 1299 3.861840 CACCCCAACACAGTGTATAGAG 58.138 50.000 6.63 0.00 0.00 2.43
621 1385 5.459768 TGAATTTGGATCATGTGTTTCACG 58.540 37.500 0.00 0.00 37.14 4.35
635 1399 2.566724 GCCCACAGGATTTGAATTTGGA 59.433 45.455 0.00 0.00 33.47 3.53
636 1400 2.674747 CGCCCACAGGATTTGAATTTGG 60.675 50.000 0.00 0.00 33.47 3.28
637 1401 2.609350 CGCCCACAGGATTTGAATTTG 58.391 47.619 0.00 0.00 33.47 2.32
638 1402 1.550072 CCGCCCACAGGATTTGAATTT 59.450 47.619 0.00 0.00 33.47 1.82
639 1403 1.185315 CCGCCCACAGGATTTGAATT 58.815 50.000 0.00 0.00 33.47 2.17
640 1404 0.331278 TCCGCCCACAGGATTTGAAT 59.669 50.000 0.00 0.00 33.47 2.57
641 1405 0.111446 TTCCGCCCACAGGATTTGAA 59.889 50.000 0.00 0.00 37.65 2.69
642 1406 0.331278 ATTCCGCCCACAGGATTTGA 59.669 50.000 0.00 0.00 37.65 2.69
643 1407 1.185315 AATTCCGCCCACAGGATTTG 58.815 50.000 0.00 0.00 37.65 2.32
644 1408 1.937191 AAATTCCGCCCACAGGATTT 58.063 45.000 0.00 0.00 37.65 2.17
645 1409 2.818751 TAAATTCCGCCCACAGGATT 57.181 45.000 0.00 0.00 37.65 3.01
646 1410 3.312736 AATAAATTCCGCCCACAGGAT 57.687 42.857 0.00 0.00 37.65 3.24
647 1411 2.818751 AATAAATTCCGCCCACAGGA 57.181 45.000 0.00 0.00 35.69 3.86
648 1412 2.757868 TGAAATAAATTCCGCCCACAGG 59.242 45.455 0.00 0.00 37.22 4.00
649 1413 3.730662 CGTGAAATAAATTCCGCCCACAG 60.731 47.826 0.00 0.00 37.22 3.66
650 1414 2.162608 CGTGAAATAAATTCCGCCCACA 59.837 45.455 0.00 0.00 37.22 4.17
651 1415 2.478879 CCGTGAAATAAATTCCGCCCAC 60.479 50.000 0.00 0.00 37.22 4.61
652 1416 1.746220 CCGTGAAATAAATTCCGCCCA 59.254 47.619 0.00 0.00 37.22 5.36
653 1417 2.018515 TCCGTGAAATAAATTCCGCCC 58.981 47.619 0.00 0.00 37.22 6.13
654 1418 3.982576 ATCCGTGAAATAAATTCCGCC 57.017 42.857 0.00 0.00 37.22 6.13
655 1419 5.336744 TCAAATCCGTGAAATAAATTCCGC 58.663 37.500 0.00 0.00 37.22 5.54
656 1420 7.540745 AGTTTCAAATCCGTGAAATAAATTCCG 59.459 33.333 3.88 0.00 46.31 4.30
657 1421 8.757164 AGTTTCAAATCCGTGAAATAAATTCC 57.243 30.769 3.88 0.00 46.31 3.01
659 1423 8.987890 CCAAGTTTCAAATCCGTGAAATAAATT 58.012 29.630 3.88 0.00 46.31 1.82
660 1424 8.147704 ACCAAGTTTCAAATCCGTGAAATAAAT 58.852 29.630 3.88 0.00 46.31 1.40
661 1425 7.436673 CACCAAGTTTCAAATCCGTGAAATAAA 59.563 33.333 3.88 0.00 46.31 1.40
662 1426 6.920758 CACCAAGTTTCAAATCCGTGAAATAA 59.079 34.615 3.88 0.00 46.31 1.40
663 1427 6.039941 ACACCAAGTTTCAAATCCGTGAAATA 59.960 34.615 3.88 0.00 46.31 1.40
664 1428 5.163457 ACACCAAGTTTCAAATCCGTGAAAT 60.163 36.000 3.88 0.00 46.31 2.17
665 1429 4.158764 ACACCAAGTTTCAAATCCGTGAAA 59.841 37.500 0.00 0.00 43.51 2.69
666 1430 3.697045 ACACCAAGTTTCAAATCCGTGAA 59.303 39.130 0.00 0.00 35.72 3.18
667 1431 3.283751 ACACCAAGTTTCAAATCCGTGA 58.716 40.909 0.00 0.00 0.00 4.35
668 1432 3.315191 AGACACCAAGTTTCAAATCCGTG 59.685 43.478 0.00 0.00 0.00 4.94
669 1433 3.551846 AGACACCAAGTTTCAAATCCGT 58.448 40.909 0.00 0.00 0.00 4.69
670 1434 3.563808 TGAGACACCAAGTTTCAAATCCG 59.436 43.478 0.00 0.00 38.30 4.18
671 1435 4.338118 TGTGAGACACCAAGTTTCAAATCC 59.662 41.667 0.00 0.00 42.29 3.01
672 1436 5.273944 GTGTGAGACACCAAGTTTCAAATC 58.726 41.667 0.00 0.00 42.29 2.17
673 1437 5.248870 GTGTGAGACACCAAGTTTCAAAT 57.751 39.130 0.00 0.00 42.29 2.32
674 1438 4.695217 GTGTGAGACACCAAGTTTCAAA 57.305 40.909 0.00 0.00 42.29 2.69
686 1450 5.825593 ATTAAGAAGGAAGGTGTGAGACA 57.174 39.130 0.00 0.00 0.00 3.41
687 1451 9.886132 TTATTATTAAGAAGGAAGGTGTGAGAC 57.114 33.333 0.00 0.00 0.00 3.36
690 1454 9.120538 GCATTATTATTAAGAAGGAAGGTGTGA 57.879 33.333 0.03 0.00 0.00 3.58
691 1455 8.352942 GGCATTATTATTAAGAAGGAAGGTGTG 58.647 37.037 0.03 0.00 0.00 3.82
692 1456 7.228706 CGGCATTATTATTAAGAAGGAAGGTGT 59.771 37.037 0.03 0.00 0.00 4.16
693 1457 7.584987 CGGCATTATTATTAAGAAGGAAGGTG 58.415 38.462 0.03 0.00 0.00 4.00
694 1458 6.206829 GCGGCATTATTATTAAGAAGGAAGGT 59.793 38.462 0.00 0.00 0.00 3.50
695 1459 6.206634 TGCGGCATTATTATTAAGAAGGAAGG 59.793 38.462 0.00 0.00 0.00 3.46
696 1460 7.202016 TGCGGCATTATTATTAAGAAGGAAG 57.798 36.000 0.00 0.00 0.00 3.46
697 1461 6.206634 CCTGCGGCATTATTATTAAGAAGGAA 59.793 38.462 1.75 0.00 0.00 3.36
698 1462 5.705441 CCTGCGGCATTATTATTAAGAAGGA 59.295 40.000 1.75 0.00 0.00 3.36
699 1463 5.106157 CCCTGCGGCATTATTATTAAGAAGG 60.106 44.000 1.75 0.00 0.00 3.46
700 1464 5.942872 CCCTGCGGCATTATTATTAAGAAG 58.057 41.667 1.75 0.00 0.00 2.85
701 1465 5.957842 CCCTGCGGCATTATTATTAAGAA 57.042 39.130 1.75 0.00 0.00 2.52
745 1509 8.343168 TGTTCTTGGTTTCAGAGTTAGAAAAA 57.657 30.769 0.00 0.00 36.80 1.94
746 1510 7.931578 TGTTCTTGGTTTCAGAGTTAGAAAA 57.068 32.000 0.00 0.00 36.80 2.29
747 1511 7.931578 TTGTTCTTGGTTTCAGAGTTAGAAA 57.068 32.000 0.00 0.00 32.93 2.52
748 1512 7.931578 TTTGTTCTTGGTTTCAGAGTTAGAA 57.068 32.000 0.00 0.00 0.00 2.10
756 1520 7.775397 AACATGAATTTGTTCTTGGTTTCAG 57.225 32.000 0.00 0.00 34.83 3.02
777 1541 6.621316 AAACACGTGTTAATGGTATGAACA 57.379 33.333 32.47 0.00 37.25 3.18
780 1544 9.000486 TGAATAAAACACGTGTTAATGGTATGA 58.000 29.630 32.47 10.29 37.25 2.15
792 1556 4.378046 GCAGGGTAGTGAATAAAACACGTG 60.378 45.833 15.48 15.48 42.25 4.49
822 1624 2.357517 GGTGCTGGTGAGTCGTGG 60.358 66.667 0.00 0.00 0.00 4.94
833 1635 1.203052 GATTGGTCATTGGTGGTGCTG 59.797 52.381 0.00 0.00 0.00 4.41
854 1656 2.222819 GCAATGCTGTCGTACTACTTGC 60.223 50.000 0.00 6.50 0.00 4.01
855 1657 2.028045 CGCAATGCTGTCGTACTACTTG 59.972 50.000 2.94 0.00 0.00 3.16
861 1663 2.587612 TTTTCGCAATGCTGTCGTAC 57.412 45.000 2.94 0.00 0.00 3.67
894 1696 5.163248 TGTTGAGTGGTGTTTTCTGGATCTA 60.163 40.000 0.00 0.00 0.00 1.98
918 1720 1.604693 CCGGCTTAACTCGTGTTGACT 60.605 52.381 12.89 0.00 37.59 3.41
919 1721 0.788391 CCGGCTTAACTCGTGTTGAC 59.212 55.000 12.89 0.00 37.59 3.18
920 1722 0.947180 GCCGGCTTAACTCGTGTTGA 60.947 55.000 22.15 3.95 37.59 3.18
921 1723 1.495951 GCCGGCTTAACTCGTGTTG 59.504 57.895 22.15 0.00 37.59 3.33
922 1724 1.670083 GGCCGGCTTAACTCGTGTT 60.670 57.895 28.56 8.09 39.98 3.32
923 1725 2.047560 GGCCGGCTTAACTCGTGT 60.048 61.111 28.56 0.00 0.00 4.49
924 1726 2.818274 GGGCCGGCTTAACTCGTG 60.818 66.667 28.56 0.00 0.00 4.35
948 1750 1.221293 GCTGATGAGTGCTGAGGCT 59.779 57.895 0.00 0.00 39.59 4.58
949 1751 2.172372 CGCTGATGAGTGCTGAGGC 61.172 63.158 0.00 0.00 39.26 4.70
1141 1945 2.443390 CGGGTAGGTGGGGTCGAT 60.443 66.667 0.00 0.00 0.00 3.59
1513 2317 0.523072 TTGTAGACGCCGGTGTACTC 59.477 55.000 23.00 14.09 41.96 2.59
1593 2397 1.153549 GACACCAGCATCGGAGGAC 60.154 63.158 0.00 0.00 0.00 3.85
1857 2661 0.531974 GCGTGGTGAGGTTGTTCTCA 60.532 55.000 0.00 0.00 41.03 3.27
2049 2853 2.041265 ACGAGGAGGCCCAGGAAT 59.959 61.111 0.00 0.00 33.88 3.01
2223 3027 2.021584 CTGCAGCTGCGTCGTGTAA 61.022 57.895 32.11 12.38 45.83 2.41
2240 3044 1.002868 ATGCTGAAGCTGCCGTTCT 60.003 52.632 3.61 0.00 42.66 3.01
2369 3173 1.371558 GTCTTGTTCCTGCCGTCCT 59.628 57.895 0.00 0.00 0.00 3.85
2370 3174 1.671379 GGTCTTGTTCCTGCCGTCC 60.671 63.158 0.00 0.00 0.00 4.79
2554 3358 0.894184 ACCTCCGTCTCGAGCTTGAA 60.894 55.000 7.81 0.00 0.00 2.69
2599 3403 3.733960 CTCGTCCACCAGCGTCGA 61.734 66.667 0.00 0.00 0.00 4.20
2603 3407 4.056125 TCTGCTCGTCCACCAGCG 62.056 66.667 0.00 0.00 38.59 5.18
2626 3430 1.488705 TTGACGACCATCCAGCCCTT 61.489 55.000 0.00 0.00 0.00 3.95
2863 3667 2.626840 TGCTTACATCGCAGCAATGTA 58.373 42.857 1.75 1.75 43.14 2.29
2978 3802 9.477484 AACTACAGTATACAAGAACAACAAGAG 57.523 33.333 5.50 0.00 0.00 2.85
3019 3843 6.626488 CACGAACGTGTACTACTACATCATAC 59.374 42.308 17.44 0.00 40.91 2.39
3020 3844 6.708676 CACGAACGTGTACTACTACATCATA 58.291 40.000 17.44 0.00 40.91 2.15
3021 3845 5.566623 CACGAACGTGTACTACTACATCAT 58.433 41.667 17.44 0.00 40.91 2.45
3022 3846 4.961511 CACGAACGTGTACTACTACATCA 58.038 43.478 17.44 0.00 40.91 3.07
3063 3887 6.756074 CAGCAATAGATCGAGATCCCTAAATC 59.244 42.308 9.27 0.00 38.58 2.17
3167 7036 5.782845 TCACAACCCCCAGCTTTATTAAAAT 59.217 36.000 0.00 0.00 0.00 1.82
3228 7098 6.607600 ACAGGTCATATTTAGCTGAGAGTACA 59.392 38.462 16.96 0.00 43.52 2.90
3245 7115 3.511934 ACTTTCGCTTCTAGACAGGTCAT 59.488 43.478 1.84 0.00 0.00 3.06
3268 7138 6.403636 GCATATAAGCTCGGGGTCAAAATATG 60.404 42.308 11.64 11.64 0.00 1.78
3269 7139 5.648092 GCATATAAGCTCGGGGTCAAAATAT 59.352 40.000 0.00 0.00 0.00 1.28
3270 7140 5.001232 GCATATAAGCTCGGGGTCAAAATA 58.999 41.667 0.00 0.00 0.00 1.40
3272 7142 3.118038 AGCATATAAGCTCGGGGTCAAAA 60.118 43.478 0.00 0.00 42.18 2.44
3275 7145 1.717032 AGCATATAAGCTCGGGGTCA 58.283 50.000 0.00 0.00 42.18 4.02
3284 7154 4.136796 TGTTCATGTGGGAGCATATAAGC 58.863 43.478 0.00 0.00 0.00 3.09
3285 7155 5.371526 ACTGTTCATGTGGGAGCATATAAG 58.628 41.667 0.00 0.00 0.00 1.73
3286 7156 5.372343 ACTGTTCATGTGGGAGCATATAA 57.628 39.130 0.00 0.00 0.00 0.98
3287 7157 6.493189 TTACTGTTCATGTGGGAGCATATA 57.507 37.500 0.00 0.00 0.00 0.86
3289 7159 4.835284 TTACTGTTCATGTGGGAGCATA 57.165 40.909 0.00 0.00 0.00 3.14
3290 7160 3.719268 TTACTGTTCATGTGGGAGCAT 57.281 42.857 0.00 0.00 0.00 3.79
3291 7161 3.500448 TTTACTGTTCATGTGGGAGCA 57.500 42.857 0.00 0.00 0.00 4.26
3292 7162 4.437390 CGATTTTACTGTTCATGTGGGAGC 60.437 45.833 0.00 0.00 0.00 4.70
3294 7164 4.900684 TCGATTTTACTGTTCATGTGGGA 58.099 39.130 0.00 0.00 0.00 4.37
3295 7165 5.818136 ATCGATTTTACTGTTCATGTGGG 57.182 39.130 0.00 0.00 0.00 4.61
3296 7166 8.519492 AAAAATCGATTTTACTGTTCATGTGG 57.481 30.769 30.68 0.00 39.44 4.17
3351 7221 9.487790 AACTTTTGTCAATGTTTCTCTCAAAAA 57.512 25.926 0.00 0.00 34.51 1.94
3352 7222 9.139174 GAACTTTTGTCAATGTTTCTCTCAAAA 57.861 29.630 6.10 0.00 31.96 2.44
3353 7223 8.522830 AGAACTTTTGTCAATGTTTCTCTCAAA 58.477 29.630 6.10 0.00 31.96 2.69
3356 7226 9.657121 CTTAGAACTTTTGTCAATGTTTCTCTC 57.343 33.333 6.42 0.00 31.96 3.20
3357 7227 9.178758 ACTTAGAACTTTTGTCAATGTTTCTCT 57.821 29.630 6.42 3.36 31.96 3.10
3358 7228 9.226345 CACTTAGAACTTTTGTCAATGTTTCTC 57.774 33.333 6.42 0.00 31.96 2.87
3359 7229 7.702348 GCACTTAGAACTTTTGTCAATGTTTCT 59.298 33.333 6.10 6.96 31.96 2.52
3360 7230 7.043391 GGCACTTAGAACTTTTGTCAATGTTTC 60.043 37.037 6.10 1.04 31.96 2.78
3361 7231 6.756542 GGCACTTAGAACTTTTGTCAATGTTT 59.243 34.615 6.10 0.00 31.96 2.83
3362 7232 6.096846 AGGCACTTAGAACTTTTGTCAATGTT 59.903 34.615 4.72 4.72 27.25 2.71
3363 7233 5.594317 AGGCACTTAGAACTTTTGTCAATGT 59.406 36.000 0.00 0.00 27.25 2.71
3364 7234 5.916883 CAGGCACTTAGAACTTTTGTCAATG 59.083 40.000 0.00 0.00 34.60 2.82
3366 7236 4.202010 GCAGGCACTTAGAACTTTTGTCAA 60.202 41.667 0.00 0.00 34.60 3.18
3367 7237 3.315191 GCAGGCACTTAGAACTTTTGTCA 59.685 43.478 0.00 0.00 34.60 3.58
3368 7238 3.315191 TGCAGGCACTTAGAACTTTTGTC 59.685 43.478 0.00 0.00 34.60 3.18
3369 7239 3.287222 TGCAGGCACTTAGAACTTTTGT 58.713 40.909 0.00 0.00 34.60 2.83
3371 7241 5.337578 TTTTGCAGGCACTTAGAACTTTT 57.662 34.783 0.00 0.00 34.60 2.27
3376 7246 5.528043 TGAATTTTTGCAGGCACTTAGAA 57.472 34.783 0.00 0.00 34.60 2.10
3378 7248 5.472148 TGATGAATTTTTGCAGGCACTTAG 58.528 37.500 0.00 0.00 34.60 2.18
3380 7250 4.339872 TGATGAATTTTTGCAGGCACTT 57.660 36.364 0.00 0.00 34.60 3.16
3381 7251 4.020928 TCATGATGAATTTTTGCAGGCACT 60.021 37.500 0.00 0.00 43.88 4.40
3382 7252 4.247258 TCATGATGAATTTTTGCAGGCAC 58.753 39.130 0.00 0.00 0.00 5.01
3385 7255 7.118535 TGTGATTTCATGATGAATTTTTGCAGG 59.881 33.333 8.90 0.00 36.11 4.85
3386 7256 8.024146 TGTGATTTCATGATGAATTTTTGCAG 57.976 30.769 8.90 0.00 36.11 4.41
3387 7257 7.964604 TGTGATTTCATGATGAATTTTTGCA 57.035 28.000 8.90 1.87 36.11 4.08
3388 7258 9.485591 GAATGTGATTTCATGATGAATTTTTGC 57.514 29.630 8.90 0.00 36.11 3.68
3389 7259 9.982291 GGAATGTGATTTCATGATGAATTTTTG 57.018 29.630 8.90 0.00 36.11 2.44
3391 7261 9.378551 CAGGAATGTGATTTCATGATGAATTTT 57.621 29.630 8.90 0.00 39.18 1.82
3392 7262 8.537016 ACAGGAATGTGATTTCATGATGAATTT 58.463 29.630 8.90 0.00 39.18 1.82
3394 7264 7.655521 ACAGGAATGTGATTTCATGATGAAT 57.344 32.000 8.90 0.00 39.18 2.57
3396 7266 7.283807 CCTTACAGGAATGTGATTTCATGATGA 59.716 37.037 0.00 0.00 39.18 2.92
3397 7267 7.423199 CCTTACAGGAATGTGATTTCATGATG 58.577 38.462 0.00 0.00 39.18 3.07
3398 7268 6.040166 GCCTTACAGGAATGTGATTTCATGAT 59.960 38.462 0.00 0.00 39.18 2.45
3399 7269 5.357878 GCCTTACAGGAATGTGATTTCATGA 59.642 40.000 5.92 0.00 39.18 3.07
3400 7270 5.585390 GCCTTACAGGAATGTGATTTCATG 58.415 41.667 0.00 0.00 41.77 3.07
3401 7271 4.336433 CGCCTTACAGGAATGTGATTTCAT 59.664 41.667 0.00 0.00 37.67 2.57
3402 7272 3.689161 CGCCTTACAGGAATGTGATTTCA 59.311 43.478 0.00 0.00 37.67 2.69
3403 7273 3.689649 ACGCCTTACAGGAATGTGATTTC 59.310 43.478 0.00 0.00 37.67 2.17
3404 7274 3.440173 CACGCCTTACAGGAATGTGATTT 59.560 43.478 0.00 0.00 37.67 2.17
3405 7275 3.009723 CACGCCTTACAGGAATGTGATT 58.990 45.455 0.00 0.00 37.67 2.57
3406 7276 2.632377 CACGCCTTACAGGAATGTGAT 58.368 47.619 0.00 0.00 37.67 3.06
3407 7277 1.338674 CCACGCCTTACAGGAATGTGA 60.339 52.381 10.25 0.00 37.67 3.58
3408 7278 1.086696 CCACGCCTTACAGGAATGTG 58.913 55.000 0.00 0.00 37.67 3.21
3409 7279 0.676782 GCCACGCCTTACAGGAATGT 60.677 55.000 0.00 0.00 37.67 2.71
3410 7280 0.676466 TGCCACGCCTTACAGGAATG 60.676 55.000 0.00 0.00 37.67 2.67
3411 7281 0.037590 TTGCCACGCCTTACAGGAAT 59.962 50.000 0.00 0.00 37.67 3.01
3412 7282 0.605319 CTTGCCACGCCTTACAGGAA 60.605 55.000 0.00 0.00 37.67 3.36
3413 7283 1.003839 CTTGCCACGCCTTACAGGA 60.004 57.895 0.00 0.00 37.67 3.86
3414 7284 0.605319 TTCTTGCCACGCCTTACAGG 60.605 55.000 0.00 0.00 38.80 4.00
3415 7285 0.798776 CTTCTTGCCACGCCTTACAG 59.201 55.000 0.00 0.00 0.00 2.74
3416 7286 0.394938 TCTTCTTGCCACGCCTTACA 59.605 50.000 0.00 0.00 0.00 2.41
3417 7287 1.519408 TTCTTCTTGCCACGCCTTAC 58.481 50.000 0.00 0.00 0.00 2.34
3418 7288 2.264005 TTTCTTCTTGCCACGCCTTA 57.736 45.000 0.00 0.00 0.00 2.69
3419 7289 1.398692 TTTTCTTCTTGCCACGCCTT 58.601 45.000 0.00 0.00 0.00 4.35
3420 7290 1.398692 TTTTTCTTCTTGCCACGCCT 58.601 45.000 0.00 0.00 0.00 5.52
3421 7291 3.957383 TTTTTCTTCTTGCCACGCC 57.043 47.368 0.00 0.00 0.00 5.68
3438 7308 5.294060 ACGCATTTTGAAGCACTGAATTTTT 59.706 32.000 0.00 0.00 0.00 1.94
3439 7309 4.810491 ACGCATTTTGAAGCACTGAATTTT 59.190 33.333 0.00 0.00 0.00 1.82
3440 7310 4.370917 ACGCATTTTGAAGCACTGAATTT 58.629 34.783 0.00 0.00 0.00 1.82
3441 7311 3.981211 ACGCATTTTGAAGCACTGAATT 58.019 36.364 0.00 0.00 0.00 2.17
3442 7312 3.648339 ACGCATTTTGAAGCACTGAAT 57.352 38.095 0.00 0.00 0.00 2.57
3443 7313 3.435105 AACGCATTTTGAAGCACTGAA 57.565 38.095 0.00 0.00 0.00 3.02
3444 7314 3.114809 CAAACGCATTTTGAAGCACTGA 58.885 40.909 2.24 0.00 46.76 3.41
3445 7315 3.492725 CAAACGCATTTTGAAGCACTG 57.507 42.857 2.24 0.00 46.76 3.66
3453 7323 5.888412 AAGCTACTTTCAAACGCATTTTG 57.112 34.783 0.00 2.03 45.38 2.44
3454 7324 6.902224 AAAAGCTACTTTCAAACGCATTTT 57.098 29.167 0.00 0.00 31.99 1.82
3455 7325 6.533367 TGAAAAAGCTACTTTCAAACGCATTT 59.467 30.769 17.31 0.00 39.28 2.32
3456 7326 6.039616 TGAAAAAGCTACTTTCAAACGCATT 58.960 32.000 17.31 0.00 39.28 3.56
3457 7327 5.587289 TGAAAAAGCTACTTTCAAACGCAT 58.413 33.333 17.31 0.00 39.28 4.73
3458 7328 4.987832 TGAAAAAGCTACTTTCAAACGCA 58.012 34.783 17.31 0.00 39.28 5.24
3459 7329 5.270853 TCTGAAAAAGCTACTTTCAAACGC 58.729 37.500 19.14 0.00 41.10 4.84
3460 7330 6.487103 ACTCTGAAAAAGCTACTTTCAAACG 58.513 36.000 19.14 14.03 41.10 3.60
3461 7331 8.613482 AGTACTCTGAAAAAGCTACTTTCAAAC 58.387 33.333 19.14 15.25 41.10 2.93
3462 7332 8.612619 CAGTACTCTGAAAAAGCTACTTTCAAA 58.387 33.333 19.14 9.92 41.10 2.69
3463 7333 7.769044 ACAGTACTCTGAAAAAGCTACTTTCAA 59.231 33.333 19.14 12.10 41.10 2.69
3464 7334 7.272978 ACAGTACTCTGAAAAAGCTACTTTCA 58.727 34.615 18.13 18.13 43.76 2.69
3465 7335 7.716768 ACAGTACTCTGAAAAAGCTACTTTC 57.283 36.000 12.26 12.26 43.76 2.62
3466 7336 8.507524 AAACAGTACTCTGAAAAAGCTACTTT 57.492 30.769 0.00 0.00 43.76 2.66
3467 7337 8.507524 AAAACAGTACTCTGAAAAAGCTACTT 57.492 30.769 0.00 0.00 43.76 2.24
3468 7338 8.398665 CAAAAACAGTACTCTGAAAAAGCTACT 58.601 33.333 0.00 0.00 43.76 2.57
3469 7339 8.182227 ACAAAAACAGTACTCTGAAAAAGCTAC 58.818 33.333 0.00 0.00 43.76 3.58
3470 7340 8.276252 ACAAAAACAGTACTCTGAAAAAGCTA 57.724 30.769 0.00 0.00 43.76 3.32
3471 7341 7.158099 ACAAAAACAGTACTCTGAAAAAGCT 57.842 32.000 0.00 0.00 43.76 3.74
3472 7342 7.812309 AACAAAAACAGTACTCTGAAAAAGC 57.188 32.000 0.00 0.00 43.76 3.51
3497 7367 1.202830 TCCTAGAAGGCGTGGCAAAAA 60.203 47.619 0.00 0.00 34.61 1.94
3498 7368 0.398696 TCCTAGAAGGCGTGGCAAAA 59.601 50.000 0.00 0.00 34.61 2.44
3499 7369 0.398696 TTCCTAGAAGGCGTGGCAAA 59.601 50.000 0.00 0.00 34.61 3.68
3500 7370 0.618458 ATTCCTAGAAGGCGTGGCAA 59.382 50.000 0.00 0.00 34.61 4.52
3501 7371 0.107703 CATTCCTAGAAGGCGTGGCA 60.108 55.000 0.00 0.00 34.61 4.92
3502 7372 0.107654 ACATTCCTAGAAGGCGTGGC 60.108 55.000 0.00 0.00 34.61 5.01
3503 7373 1.207089 TCACATTCCTAGAAGGCGTGG 59.793 52.381 0.00 0.00 34.61 4.94
3504 7374 2.672961 TCACATTCCTAGAAGGCGTG 57.327 50.000 0.00 0.00 34.61 5.34
3505 7375 3.914426 AATCACATTCCTAGAAGGCGT 57.086 42.857 0.00 0.00 34.61 5.68
3506 7376 4.191544 TGAAATCACATTCCTAGAAGGCG 58.808 43.478 0.00 0.00 34.61 5.52
3507 7377 5.824624 TCATGAAATCACATTCCTAGAAGGC 59.175 40.000 0.00 0.00 34.61 4.35
3508 7378 6.018425 CGTCATGAAATCACATTCCTAGAAGG 60.018 42.308 0.00 0.00 36.46 3.46
3509 7379 6.758416 TCGTCATGAAATCACATTCCTAGAAG 59.242 38.462 0.00 0.00 0.00 2.85
3510 7380 6.639563 TCGTCATGAAATCACATTCCTAGAA 58.360 36.000 0.00 0.00 0.00 2.10
3511 7381 6.220726 TCGTCATGAAATCACATTCCTAGA 57.779 37.500 0.00 0.00 0.00 2.43
3512 7382 6.908870 TTCGTCATGAAATCACATTCCTAG 57.091 37.500 0.00 0.00 32.37 3.02
3513 7383 7.864108 AATTCGTCATGAAATCACATTCCTA 57.136 32.000 0.00 0.00 40.71 2.94
3514 7384 6.764308 AATTCGTCATGAAATCACATTCCT 57.236 33.333 0.00 0.00 40.71 3.36
3515 7385 7.816945 AAAATTCGTCATGAAATCACATTCC 57.183 32.000 0.00 0.00 40.71 3.01
3516 7386 7.685304 GCAAAAATTCGTCATGAAATCACATTC 59.315 33.333 0.00 0.00 40.71 2.67
3517 7387 7.171167 TGCAAAAATTCGTCATGAAATCACATT 59.829 29.630 0.00 0.00 40.71 2.71
3518 7388 6.645827 TGCAAAAATTCGTCATGAAATCACAT 59.354 30.769 0.00 0.00 40.71 3.21
3519 7389 5.981915 TGCAAAAATTCGTCATGAAATCACA 59.018 32.000 0.00 0.00 40.71 3.58
3520 7390 6.400303 CCTGCAAAAATTCGTCATGAAATCAC 60.400 38.462 0.00 0.00 40.71 3.06
3521 7391 5.634439 CCTGCAAAAATTCGTCATGAAATCA 59.366 36.000 0.00 0.00 40.71 2.57
3522 7392 5.863397 TCCTGCAAAAATTCGTCATGAAATC 59.137 36.000 0.00 0.00 40.71 2.17
3523 7393 5.782047 TCCTGCAAAAATTCGTCATGAAAT 58.218 33.333 0.00 0.00 40.71 2.17
3524 7394 5.193663 TCCTGCAAAAATTCGTCATGAAA 57.806 34.783 0.00 0.00 40.71 2.69
3525 7395 4.844998 TCCTGCAAAAATTCGTCATGAA 57.155 36.364 0.00 0.00 41.81 2.57
3526 7396 4.278170 AGTTCCTGCAAAAATTCGTCATGA 59.722 37.500 0.00 0.00 0.00 3.07
3527 7397 4.549458 AGTTCCTGCAAAAATTCGTCATG 58.451 39.130 0.00 0.00 0.00 3.07
3528 7398 4.853924 AGTTCCTGCAAAAATTCGTCAT 57.146 36.364 0.00 0.00 0.00 3.06
3529 7399 4.647424 AAGTTCCTGCAAAAATTCGTCA 57.353 36.364 0.00 0.00 0.00 4.35
3530 7400 5.997385 TCTAAGTTCCTGCAAAAATTCGTC 58.003 37.500 0.00 0.00 0.00 4.20
3531 7401 6.039382 AGTTCTAAGTTCCTGCAAAAATTCGT 59.961 34.615 0.00 0.00 0.00 3.85
3532 7402 6.438763 AGTTCTAAGTTCCTGCAAAAATTCG 58.561 36.000 0.00 0.00 0.00 3.34
3533 7403 8.648557 AAAGTTCTAAGTTCCTGCAAAAATTC 57.351 30.769 0.00 0.00 0.00 2.17
3534 7404 8.882736 CAAAAGTTCTAAGTTCCTGCAAAAATT 58.117 29.630 0.00 0.00 0.00 1.82
3535 7405 8.040727 ACAAAAGTTCTAAGTTCCTGCAAAAAT 58.959 29.630 0.00 0.00 0.00 1.82
3536 7406 7.382898 ACAAAAGTTCTAAGTTCCTGCAAAAA 58.617 30.769 0.00 0.00 0.00 1.94
3537 7407 6.930731 ACAAAAGTTCTAAGTTCCTGCAAAA 58.069 32.000 0.00 0.00 0.00 2.44
3538 7408 6.151985 TGACAAAAGTTCTAAGTTCCTGCAAA 59.848 34.615 0.00 0.00 0.00 3.68
3539 7409 5.650266 TGACAAAAGTTCTAAGTTCCTGCAA 59.350 36.000 0.00 0.00 0.00 4.08
3540 7410 5.189928 TGACAAAAGTTCTAAGTTCCTGCA 58.810 37.500 0.00 0.00 0.00 4.41
3541 7411 5.751243 TGACAAAAGTTCTAAGTTCCTGC 57.249 39.130 0.00 0.00 0.00 4.85
3542 7412 7.707104 ACATTGACAAAAGTTCTAAGTTCCTG 58.293 34.615 0.00 0.00 0.00 3.86
3543 7413 7.881775 ACATTGACAAAAGTTCTAAGTTCCT 57.118 32.000 0.00 0.00 0.00 3.36
3544 7414 8.926715 AAACATTGACAAAAGTTCTAAGTTCC 57.073 30.769 9.09 0.00 0.00 3.62
3545 7415 9.788960 AGAAACATTGACAAAAGTTCTAAGTTC 57.211 29.630 9.09 4.00 0.00 3.01
3546 7416 9.788960 GAGAAACATTGACAAAAGTTCTAAGTT 57.211 29.630 9.09 0.00 0.00 2.66
3547 7417 9.178758 AGAGAAACATTGACAAAAGTTCTAAGT 57.821 29.630 9.09 0.00 0.00 2.24
3548 7418 9.657121 GAGAGAAACATTGACAAAAGTTCTAAG 57.343 33.333 9.09 0.00 0.00 2.18
3549 7419 9.173021 TGAGAGAAACATTGACAAAAGTTCTAA 57.827 29.630 9.09 0.00 0.00 2.10
3550 7420 8.731275 TGAGAGAAACATTGACAAAAGTTCTA 57.269 30.769 9.09 0.00 0.00 2.10
3551 7421 7.630242 TGAGAGAAACATTGACAAAAGTTCT 57.370 32.000 9.09 9.17 0.00 3.01
3552 7422 8.687824 TTTGAGAGAAACATTGACAAAAGTTC 57.312 30.769 9.09 5.33 0.00 3.01
3553 7423 9.487790 TTTTTGAGAGAAACATTGACAAAAGTT 57.512 25.926 0.00 0.00 37.18 2.66
3606 7476 9.575783 GTGAACAGTAAAACCAAAACTAAATCA 57.424 29.630 0.00 0.00 0.00 2.57
3607 7477 9.027129 GGTGAACAGTAAAACCAAAACTAAATC 57.973 33.333 0.00 0.00 32.69 2.17
3608 7478 7.982919 GGGTGAACAGTAAAACCAAAACTAAAT 59.017 33.333 0.00 0.00 34.18 1.40
3609 7479 7.321908 GGGTGAACAGTAAAACCAAAACTAAA 58.678 34.615 0.00 0.00 34.18 1.85
3610 7480 6.404513 CGGGTGAACAGTAAAACCAAAACTAA 60.405 38.462 0.00 0.00 34.18 2.24
3611 7481 5.066246 CGGGTGAACAGTAAAACCAAAACTA 59.934 40.000 0.00 0.00 34.18 2.24
3612 7482 4.142337 CGGGTGAACAGTAAAACCAAAACT 60.142 41.667 0.00 0.00 34.18 2.66
3613 7483 4.106909 CGGGTGAACAGTAAAACCAAAAC 58.893 43.478 0.00 0.00 34.18 2.43
3614 7484 4.015084 TCGGGTGAACAGTAAAACCAAAA 58.985 39.130 0.00 0.00 34.18 2.44
3615 7485 3.618351 TCGGGTGAACAGTAAAACCAAA 58.382 40.909 0.00 0.00 34.18 3.28
3616 7486 3.207778 CTCGGGTGAACAGTAAAACCAA 58.792 45.455 0.00 0.00 34.18 3.67
3617 7487 2.841215 CTCGGGTGAACAGTAAAACCA 58.159 47.619 0.00 0.00 34.18 3.67
3618 7488 1.534163 GCTCGGGTGAACAGTAAAACC 59.466 52.381 0.00 0.00 0.00 3.27
3619 7489 2.479275 GAGCTCGGGTGAACAGTAAAAC 59.521 50.000 0.00 0.00 0.00 2.43
3620 7490 2.103432 TGAGCTCGGGTGAACAGTAAAA 59.897 45.455 9.64 0.00 0.00 1.52
3621 7491 1.689813 TGAGCTCGGGTGAACAGTAAA 59.310 47.619 9.64 0.00 0.00 2.01
3622 7492 1.334160 TGAGCTCGGGTGAACAGTAA 58.666 50.000 9.64 0.00 0.00 2.24
3623 7493 1.557099 ATGAGCTCGGGTGAACAGTA 58.443 50.000 9.64 0.00 0.00 2.74
3624 7494 0.687354 AATGAGCTCGGGTGAACAGT 59.313 50.000 9.64 0.00 0.00 3.55
3625 7495 1.466167 CAAATGAGCTCGGGTGAACAG 59.534 52.381 9.64 0.00 0.00 3.16
3626 7496 1.071542 TCAAATGAGCTCGGGTGAACA 59.928 47.619 9.64 0.00 0.00 3.18
3627 7497 1.734465 CTCAAATGAGCTCGGGTGAAC 59.266 52.381 9.64 0.00 35.13 3.18
3628 7498 2.099141 CTCAAATGAGCTCGGGTGAA 57.901 50.000 9.64 0.00 35.13 3.18
3629 7499 3.840831 CTCAAATGAGCTCGGGTGA 57.159 52.632 9.64 10.63 35.13 4.02
3648 7518 1.006805 CGGCTAATCTGCTCCCGAG 60.007 63.158 0.00 0.00 41.34 4.63
3649 7519 3.129300 CGGCTAATCTGCTCCCGA 58.871 61.111 0.00 0.00 41.34 5.14
3650 7520 2.663188 GCGGCTAATCTGCTCCCG 60.663 66.667 0.00 0.00 43.74 5.14
3651 7521 2.663188 CGCGGCTAATCTGCTCCC 60.663 66.667 0.00 0.00 44.92 4.30
3652 7522 1.951631 GACGCGGCTAATCTGCTCC 60.952 63.158 12.47 0.00 44.92 4.70
3653 7523 2.296480 CGACGCGGCTAATCTGCTC 61.296 63.158 11.76 0.00 44.92 4.26
3654 7524 2.278857 CGACGCGGCTAATCTGCT 60.279 61.111 11.76 0.00 44.92 4.24
3655 7525 2.582498 ACGACGCGGCTAATCTGC 60.582 61.111 11.76 0.00 43.66 4.26
3656 7526 1.472276 GACACGACGCGGCTAATCTG 61.472 60.000 11.76 0.00 0.00 2.90
3657 7527 1.226603 GACACGACGCGGCTAATCT 60.227 57.895 11.76 0.00 0.00 2.40
3658 7528 0.028505 TAGACACGACGCGGCTAATC 59.971 55.000 11.76 3.93 0.00 1.75
3659 7529 0.029035 CTAGACACGACGCGGCTAAT 59.971 55.000 11.76 0.00 0.00 1.73
3660 7530 1.020861 TCTAGACACGACGCGGCTAA 61.021 55.000 11.76 0.00 0.00 3.09
3661 7531 1.426816 CTCTAGACACGACGCGGCTA 61.427 60.000 11.76 0.00 0.00 3.93
3662 7532 2.745100 TCTAGACACGACGCGGCT 60.745 61.111 11.76 0.00 0.00 5.52
3663 7533 2.277373 CTCTAGACACGACGCGGC 60.277 66.667 12.47 6.41 0.00 6.53
3664 7534 1.348938 CTCTCTAGACACGACGCGG 59.651 63.158 12.47 0.00 0.00 6.46
3665 7535 1.297012 GCTCTCTAGACACGACGCG 60.297 63.158 3.53 3.53 0.00 6.01
3666 7536 1.062845 GGCTCTCTAGACACGACGC 59.937 63.158 0.00 0.00 0.00 5.19
3667 7537 1.062880 GAAGGCTCTCTAGACACGACG 59.937 57.143 0.00 0.00 30.50 5.12
3668 7538 2.361789 AGAAGGCTCTCTAGACACGAC 58.638 52.381 0.00 0.00 30.50 4.34
3669 7539 2.750166 CAAGAAGGCTCTCTAGACACGA 59.250 50.000 0.00 0.00 30.50 4.35
3670 7540 2.750166 TCAAGAAGGCTCTCTAGACACG 59.250 50.000 0.00 0.00 30.50 4.49
3671 7541 4.681744 CATCAAGAAGGCTCTCTAGACAC 58.318 47.826 0.00 0.00 30.50 3.67
3672 7542 3.131933 GCATCAAGAAGGCTCTCTAGACA 59.868 47.826 0.00 0.00 30.50 3.41
3673 7543 3.131933 TGCATCAAGAAGGCTCTCTAGAC 59.868 47.826 0.00 0.00 0.00 2.59
3674 7544 3.369175 TGCATCAAGAAGGCTCTCTAGA 58.631 45.455 0.00 0.00 0.00 2.43
3675 7545 3.815856 TGCATCAAGAAGGCTCTCTAG 57.184 47.619 0.00 0.00 0.00 2.43
3676 7546 3.681034 GCTTGCATCAAGAAGGCTCTCTA 60.681 47.826 10.44 0.00 43.42 2.43
3677 7547 2.940527 GCTTGCATCAAGAAGGCTCTCT 60.941 50.000 10.44 0.00 43.42 3.10
3678 7548 1.401199 GCTTGCATCAAGAAGGCTCTC 59.599 52.381 10.44 0.00 43.42 3.20
3679 7549 1.271762 TGCTTGCATCAAGAAGGCTCT 60.272 47.619 10.44 0.00 43.42 4.09
3680 7550 1.171308 TGCTTGCATCAAGAAGGCTC 58.829 50.000 10.44 0.00 43.42 4.70
3681 7551 1.624336 TTGCTTGCATCAAGAAGGCT 58.376 45.000 10.44 0.00 43.42 4.58
3682 7552 2.443887 TTTGCTTGCATCAAGAAGGC 57.556 45.000 10.44 0.00 43.42 4.35
3683 7553 2.671396 GCATTTGCTTGCATCAAGAAGG 59.329 45.455 10.44 0.69 43.42 3.46
3684 7554 3.991605 GCATTTGCTTGCATCAAGAAG 57.008 42.857 10.44 0.00 43.42 2.85
3703 7573 0.179062 CCTCCCTGTGATGCAGTAGC 60.179 60.000 0.00 0.00 43.55 3.58
3704 7574 0.467384 CCCTCCCTGTGATGCAGTAG 59.533 60.000 0.00 0.00 43.55 2.57
3705 7575 0.982852 CCCCTCCCTGTGATGCAGTA 60.983 60.000 0.00 0.00 43.55 2.74
3706 7576 2.304056 CCCCTCCCTGTGATGCAGT 61.304 63.158 0.00 0.00 43.55 4.40
3707 7577 2.593978 CCCCTCCCTGTGATGCAG 59.406 66.667 0.00 0.00 44.63 4.41
3708 7578 2.863383 ATCCCCCTCCCTGTGATGCA 62.863 60.000 0.00 0.00 0.00 3.96
3709 7579 0.768221 TATCCCCCTCCCTGTGATGC 60.768 60.000 0.00 0.00 0.00 3.91
3710 7580 1.059913 GTATCCCCCTCCCTGTGATG 58.940 60.000 0.00 0.00 0.00 3.07
3711 7581 0.104409 GGTATCCCCCTCCCTGTGAT 60.104 60.000 0.00 0.00 0.00 3.06
3712 7582 1.316969 GGTATCCCCCTCCCTGTGA 59.683 63.158 0.00 0.00 0.00 3.58
3713 7583 1.004230 TGGTATCCCCCTCCCTGTG 59.996 63.158 0.00 0.00 0.00 3.66
3714 7584 1.004361 GTGGTATCCCCCTCCCTGT 59.996 63.158 0.00 0.00 0.00 4.00
3715 7585 0.623324 TTGTGGTATCCCCCTCCCTG 60.623 60.000 0.00 0.00 0.00 4.45
3716 7586 0.122435 TTTGTGGTATCCCCCTCCCT 59.878 55.000 0.00 0.00 0.00 4.20
3717 7587 0.551396 CTTTGTGGTATCCCCCTCCC 59.449 60.000 0.00 0.00 0.00 4.30
3718 7588 1.490910 CTCTTTGTGGTATCCCCCTCC 59.509 57.143 0.00 0.00 0.00 4.30
3719 7589 1.490910 CCTCTTTGTGGTATCCCCCTC 59.509 57.143 0.00 0.00 0.00 4.30
3720 7590 1.082194 TCCTCTTTGTGGTATCCCCCT 59.918 52.381 0.00 0.00 0.00 4.79
3721 7591 1.490910 CTCCTCTTTGTGGTATCCCCC 59.509 57.143 0.00 0.00 0.00 5.40
3722 7592 1.490910 CCTCCTCTTTGTGGTATCCCC 59.509 57.143 0.00 0.00 0.00 4.81
3723 7593 1.134068 GCCTCCTCTTTGTGGTATCCC 60.134 57.143 0.00 0.00 0.00 3.85
3724 7594 1.840635 AGCCTCCTCTTTGTGGTATCC 59.159 52.381 0.00 0.00 0.00 2.59
3725 7595 2.420687 CCAGCCTCCTCTTTGTGGTATC 60.421 54.545 0.00 0.00 0.00 2.24
3726 7596 1.561542 CCAGCCTCCTCTTTGTGGTAT 59.438 52.381 0.00 0.00 0.00 2.73
3727 7597 0.984230 CCAGCCTCCTCTTTGTGGTA 59.016 55.000 0.00 0.00 0.00 3.25
3728 7598 0.768221 TCCAGCCTCCTCTTTGTGGT 60.768 55.000 0.00 0.00 0.00 4.16
3729 7599 0.322008 GTCCAGCCTCCTCTTTGTGG 60.322 60.000 0.00 0.00 0.00 4.17
3730 7600 0.689623 AGTCCAGCCTCCTCTTTGTG 59.310 55.000 0.00 0.00 0.00 3.33
3731 7601 2.327325 TAGTCCAGCCTCCTCTTTGT 57.673 50.000 0.00 0.00 0.00 2.83
3732 7602 3.922171 AATAGTCCAGCCTCCTCTTTG 57.078 47.619 0.00 0.00 0.00 2.77
3733 7603 4.625963 AGTAATAGTCCAGCCTCCTCTTT 58.374 43.478 0.00 0.00 0.00 2.52
3734 7604 4.273300 AGTAATAGTCCAGCCTCCTCTT 57.727 45.455 0.00 0.00 0.00 2.85
3735 7605 3.983533 AGTAATAGTCCAGCCTCCTCT 57.016 47.619 0.00 0.00 0.00 3.69
3736 7606 4.021807 GCTAAGTAATAGTCCAGCCTCCTC 60.022 50.000 0.00 0.00 33.87 3.71
3737 7607 3.898741 GCTAAGTAATAGTCCAGCCTCCT 59.101 47.826 0.00 0.00 33.87 3.69
3741 7611 5.215252 TCATGCTAAGTAATAGTCCAGCC 57.785 43.478 0.00 0.00 33.87 4.85
3742 7612 7.736447 ATTTCATGCTAAGTAATAGTCCAGC 57.264 36.000 0.00 0.00 33.87 4.85
3756 7626 9.716531 CTGATTCAGAATAGGTATTTCATGCTA 57.283 33.333 8.00 0.00 32.44 3.49
3758 7628 7.446625 ACCTGATTCAGAATAGGTATTTCATGC 59.553 37.037 15.36 0.00 41.54 4.06
3762 7632 8.624776 CCAAACCTGATTCAGAATAGGTATTTC 58.375 37.037 15.36 0.00 42.47 2.17
3763 7633 7.068716 GCCAAACCTGATTCAGAATAGGTATTT 59.931 37.037 15.36 10.90 42.47 1.40
3764 7634 6.547510 GCCAAACCTGATTCAGAATAGGTATT 59.452 38.462 15.36 13.35 42.47 1.89
3765 7635 6.064717 GCCAAACCTGATTCAGAATAGGTAT 58.935 40.000 15.36 10.09 42.47 2.73
3766 7636 5.437060 GCCAAACCTGATTCAGAATAGGTA 58.563 41.667 15.36 0.00 42.47 3.08
3767 7637 4.273318 GCCAAACCTGATTCAGAATAGGT 58.727 43.478 15.36 14.16 45.07 3.08
3768 7638 3.313526 CGCCAAACCTGATTCAGAATAGG 59.686 47.826 15.36 11.81 32.44 2.57
3769 7639 3.941483 ACGCCAAACCTGATTCAGAATAG 59.059 43.478 15.36 0.88 32.44 1.73
3770 7640 3.938963 GACGCCAAACCTGATTCAGAATA 59.061 43.478 15.36 0.00 32.44 1.75
3772 7642 2.151202 GACGCCAAACCTGATTCAGAA 58.849 47.619 15.36 0.00 32.44 3.02
3773 7643 1.071542 TGACGCCAAACCTGATTCAGA 59.928 47.619 15.36 0.00 32.44 3.27
3774 7644 1.522668 TGACGCCAAACCTGATTCAG 58.477 50.000 6.70 6.70 0.00 3.02
3775 7645 1.974265 TTGACGCCAAACCTGATTCA 58.026 45.000 0.00 0.00 0.00 2.57
3776 7646 3.363341 TTTTGACGCCAAACCTGATTC 57.637 42.857 0.00 0.00 41.54 2.52
3777 7647 4.321675 GGTATTTTGACGCCAAACCTGATT 60.322 41.667 0.00 0.00 41.54 2.57
3778 7648 3.192633 GGTATTTTGACGCCAAACCTGAT 59.807 43.478 0.00 0.00 41.54 2.90
3779 7649 2.554893 GGTATTTTGACGCCAAACCTGA 59.445 45.455 0.00 0.00 41.54 3.86
3780 7650 2.294791 TGGTATTTTGACGCCAAACCTG 59.705 45.455 0.00 0.00 41.54 4.00
3781 7651 2.588620 TGGTATTTTGACGCCAAACCT 58.411 42.857 0.00 0.00 41.54 3.50
3782 7652 3.586100 ATGGTATTTTGACGCCAAACC 57.414 42.857 0.00 0.00 41.54 3.27
3783 7653 3.122780 GCAATGGTATTTTGACGCCAAAC 59.877 43.478 0.00 0.00 41.54 2.93
3784 7654 3.006323 AGCAATGGTATTTTGACGCCAAA 59.994 39.130 0.00 0.00 40.24 3.28
3785 7655 2.560542 AGCAATGGTATTTTGACGCCAA 59.439 40.909 0.00 0.00 34.39 4.52
3786 7656 2.166829 AGCAATGGTATTTTGACGCCA 58.833 42.857 0.00 0.00 35.28 5.69
3787 7657 2.939460 AGCAATGGTATTTTGACGCC 57.061 45.000 0.00 0.00 0.00 5.68
3788 7658 2.845967 CGAAGCAATGGTATTTTGACGC 59.154 45.455 0.00 0.00 0.00 5.19
3789 7659 4.334443 CTCGAAGCAATGGTATTTTGACG 58.666 43.478 0.00 0.00 0.00 4.35
3790 7660 4.156008 ACCTCGAAGCAATGGTATTTTGAC 59.844 41.667 0.00 0.00 0.00 3.18
3791 7661 4.155826 CACCTCGAAGCAATGGTATTTTGA 59.844 41.667 0.00 0.00 0.00 2.69
3792 7662 4.155826 TCACCTCGAAGCAATGGTATTTTG 59.844 41.667 0.00 0.00 0.00 2.44
3793 7663 4.331968 TCACCTCGAAGCAATGGTATTTT 58.668 39.130 0.00 0.00 0.00 1.82
3794 7664 3.950397 TCACCTCGAAGCAATGGTATTT 58.050 40.909 0.00 0.00 0.00 1.40
3795 7665 3.627395 TCACCTCGAAGCAATGGTATT 57.373 42.857 0.00 0.00 0.00 1.89
3796 7666 3.627395 TTCACCTCGAAGCAATGGTAT 57.373 42.857 0.00 0.00 0.00 2.73
3797 7667 3.410631 TTTCACCTCGAAGCAATGGTA 57.589 42.857 0.00 0.00 34.32 3.25
3798 7668 2.270352 TTTCACCTCGAAGCAATGGT 57.730 45.000 0.00 0.00 34.32 3.55
3799 7669 2.293122 TGTTTTCACCTCGAAGCAATGG 59.707 45.455 0.00 0.00 34.32 3.16
3800 7670 3.624326 TGTTTTCACCTCGAAGCAATG 57.376 42.857 0.00 0.00 34.32 2.82
3801 7671 4.853924 AATGTTTTCACCTCGAAGCAAT 57.146 36.364 0.00 0.00 34.32 3.56
3802 7672 4.358851 CAAATGTTTTCACCTCGAAGCAA 58.641 39.130 0.00 0.00 34.32 3.91
3803 7673 3.795150 GCAAATGTTTTCACCTCGAAGCA 60.795 43.478 0.00 0.00 34.32 3.91
3804 7674 2.726241 GCAAATGTTTTCACCTCGAAGC 59.274 45.455 0.00 0.00 34.32 3.86
3805 7675 4.228912 AGCAAATGTTTTCACCTCGAAG 57.771 40.909 0.00 0.00 34.32 3.79
3806 7676 4.358851 CAAGCAAATGTTTTCACCTCGAA 58.641 39.130 0.00 0.00 0.00 3.71
3807 7677 3.243367 CCAAGCAAATGTTTTCACCTCGA 60.243 43.478 0.00 0.00 0.00 4.04
3808 7678 3.052036 CCAAGCAAATGTTTTCACCTCG 58.948 45.455 0.00 0.00 0.00 4.63
3809 7679 4.301628 CTCCAAGCAAATGTTTTCACCTC 58.698 43.478 0.00 0.00 0.00 3.85
3810 7680 3.070015 CCTCCAAGCAAATGTTTTCACCT 59.930 43.478 0.00 0.00 0.00 4.00
3811 7681 3.392882 CCTCCAAGCAAATGTTTTCACC 58.607 45.455 0.00 0.00 0.00 4.02
3839 7709 4.103153 AGAAAATGGAGGAAGAGTGTGTCA 59.897 41.667 0.00 0.00 0.00 3.58
3843 7713 3.652869 TGGAGAAAATGGAGGAAGAGTGT 59.347 43.478 0.00 0.00 0.00 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.