Multiple sequence alignment - TraesCS1D01G243300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G243300 chr1D 100.000 5964 0 0 1 5964 333495241 333501204 0.000000e+00 11014.0
1 TraesCS1D01G243300 chr1D 88.710 62 7 0 5202 5263 59879205 59879144 6.410000e-10 76.8
2 TraesCS1D01G243300 chr1D 86.765 68 8 1 5196 5263 145941583 145941649 2.310000e-09 75.0
3 TraesCS1D01G243300 chr1A 92.697 2273 76 32 3108 5348 431778660 431780874 0.000000e+00 3195.0
4 TraesCS1D01G243300 chr1A 95.300 2000 59 15 770 2738 431776330 431778325 0.000000e+00 3140.0
5 TraesCS1D01G243300 chr1A 96.618 621 21 0 5344 5964 431780929 431781549 0.000000e+00 1031.0
6 TraesCS1D01G243300 chr1A 99.176 364 3 0 2740 3103 487492100 487491737 0.000000e+00 656.0
7 TraesCS1D01G243300 chr1A 99.174 363 3 0 2740 3102 45800209 45799847 0.000000e+00 654.0
8 TraesCS1D01G243300 chr1A 93.750 96 4 2 2645 2738 431778576 431778671 6.230000e-30 143.0
9 TraesCS1D01G243300 chr1A 91.935 62 5 0 5202 5263 58289703 58289642 2.960000e-13 87.9
10 TraesCS1D01G243300 chr1A 95.455 44 2 0 3158 3201 431778545 431778588 2.980000e-08 71.3
11 TraesCS1D01G243300 chr1B 92.896 2196 98 23 3103 5276 449389602 449391761 0.000000e+00 3138.0
12 TraesCS1D01G243300 chr1B 95.396 1694 56 9 889 2565 449387335 449389023 0.000000e+00 2676.0
13 TraesCS1D01G243300 chr1B 97.101 621 18 0 5344 5964 449391920 449392540 0.000000e+00 1048.0
14 TraesCS1D01G243300 chr1B 88.662 441 46 4 11 450 449363549 449363986 8.800000e-148 534.0
15 TraesCS1D01G243300 chr1B 87.557 442 43 8 11 451 449364688 449365118 8.920000e-138 501.0
16 TraesCS1D01G243300 chr1B 94.536 183 4 1 2562 2738 449389280 449389462 1.640000e-70 278.0
17 TraesCS1D01G243300 chr1B 84.862 218 18 6 717 924 449364084 449364296 7.830000e-49 206.0
18 TraesCS1D01G243300 chr1B 90.210 143 10 2 750 890 449386383 449386523 3.670000e-42 183.0
19 TraesCS1D01G243300 chr1B 87.879 99 3 3 3103 3201 449389446 449389535 2.270000e-19 108.0
20 TraesCS1D01G243300 chr3A 99.449 363 2 0 2740 3102 631289678 631290040 0.000000e+00 660.0
21 TraesCS1D01G243300 chr3A 77.844 501 65 35 998 1461 724053116 724053607 9.850000e-68 268.0
22 TraesCS1D01G243300 chr3B 98.649 370 5 0 2734 3103 353864596 353864965 0.000000e+00 656.0
23 TraesCS1D01G243300 chr3B 92.174 115 9 0 998 1112 794864564 794864678 4.780000e-36 163.0
24 TraesCS1D01G243300 chr3B 96.739 92 3 0 1201 1292 794864784 794864875 2.880000e-33 154.0
25 TraesCS1D01G243300 chr3B 94.898 98 5 0 1364 1461 794864965 794865062 2.880000e-33 154.0
26 TraesCS1D01G243300 chr3B 100.000 28 0 0 3217 3244 209598925 209598898 1.100000e-02 52.8
27 TraesCS1D01G243300 chr2D 99.176 364 3 0 2739 3102 159328628 159328265 0.000000e+00 656.0
28 TraesCS1D01G243300 chr2D 99.446 361 2 0 2742 3102 370058017 370058377 0.000000e+00 656.0
29 TraesCS1D01G243300 chr4B 99.174 363 3 0 2740 3102 306604320 306604682 0.000000e+00 654.0
30 TraesCS1D01G243300 chr4B 99.174 363 3 0 2740 3102 609476409 609476047 0.000000e+00 654.0
31 TraesCS1D01G243300 chr6B 97.632 380 6 3 2724 3102 15712980 15713357 0.000000e+00 649.0
32 TraesCS1D01G243300 chrUn 83.396 265 32 11 1201 1461 45750705 45750961 9.990000e-58 235.0
33 TraesCS1D01G243300 chrUn 92.174 115 9 0 998 1112 45750492 45750606 4.780000e-36 163.0
34 TraesCS1D01G243300 chr3D 92.308 117 8 1 4494 4609 191315710 191315594 1.330000e-36 165.0
35 TraesCS1D01G243300 chr7A 90.323 62 6 0 5202 5263 652541911 652541850 1.380000e-11 82.4
36 TraesCS1D01G243300 chr7A 84.932 73 8 3 5191 5263 391906577 391906646 2.980000e-08 71.3
37 TraesCS1D01G243300 chr7B 86.301 73 7 3 5191 5263 297400652 297400583 6.410000e-10 76.8
38 TraesCS1D01G243300 chr5B 87.879 66 7 1 5202 5267 328373932 328373868 6.410000e-10 76.8
39 TraesCS1D01G243300 chr2A 87.879 66 7 1 5198 5263 29151037 29150973 6.410000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G243300 chr1D 333495241 333501204 5963 False 11014.000000 11014 100.000 1 5964 1 chr1D.!!$F2 5963
1 TraesCS1D01G243300 chr1A 431776330 431781549 5219 False 1516.060000 3195 94.764 770 5964 5 chr1A.!!$F1 5194
2 TraesCS1D01G243300 chr1B 449386383 449392540 6157 False 1238.500000 3138 93.003 750 5964 6 chr1B.!!$F2 5214
3 TraesCS1D01G243300 chr1B 449363549 449365118 1569 False 413.666667 534 87.027 11 924 3 chr1B.!!$F1 913

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
972 1798 0.107508 GCGTCCCCTAAACCCTAACC 60.108 60.0 0.00 0.0 0.00 2.85 F
2837 4163 0.031111 CCAGGAGGTCACCCATCCTA 60.031 60.0 4.27 0.0 36.69 2.94 F
3048 4374 0.034089 GCCAAGCCTATCACAACCCT 60.034 55.0 0.00 0.0 0.00 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2899 4225 0.034089 AGGGTTGTGATAGGCTTGGC 60.034 55.0 0.00 0.00 0.00 4.52 R
4326 5665 0.951040 CAAGCCACGAGTCAGGGAAC 60.951 60.0 1.33 0.00 0.00 3.62 R
5014 6356 1.602311 CTACATGCCATGGCCTTCTC 58.398 55.0 33.44 6.02 41.09 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 7.804843 TTTTTAGATGTTTAGGGTCGTTTCA 57.195 32.000 0.00 0.00 0.00 2.69
68 69 8.983307 ATAAAAAGTGACTACTTCTACCGAAG 57.017 34.615 0.83 0.83 46.14 3.79
103 104 9.913310 TCCTTTTCATATTTACCATGACATGTA 57.087 29.630 14.26 4.50 32.23 2.29
113 114 3.776969 ACCATGACATGTACTGAGACCAT 59.223 43.478 14.26 0.00 0.00 3.55
134 135 7.437748 ACCATCAGTTGATATACAGTAAGCTC 58.562 38.462 0.00 0.00 32.63 4.09
136 137 6.937436 TCAGTTGATATACAGTAAGCTCGA 57.063 37.500 0.00 0.00 0.00 4.04
164 165 4.627035 GGGCTAACAAAAGTTTGATCATGC 59.373 41.667 10.66 6.99 40.55 4.06
167 168 5.059710 GCTAACAAAAGTTTGATCATGCGAC 59.940 40.000 10.66 0.00 40.55 5.19
168 169 3.554524 ACAAAAGTTTGATCATGCGACG 58.445 40.909 10.66 0.00 40.55 5.12
174 175 4.708601 AGTTTGATCATGCGACGTTTTAC 58.291 39.130 0.00 0.00 0.00 2.01
176 177 3.715618 TGATCATGCGACGTTTTACAC 57.284 42.857 0.00 0.00 0.00 2.90
179 180 3.946308 TCATGCGACGTTTTACACAAA 57.054 38.095 0.00 0.00 0.00 2.83
184 185 4.413087 TGCGACGTTTTACACAAATGTTT 58.587 34.783 0.00 0.00 40.48 2.83
217 218 2.880443 ACCAACAACAAGCATCTGGAT 58.120 42.857 0.00 0.00 0.00 3.41
218 219 4.032960 ACCAACAACAAGCATCTGGATA 57.967 40.909 0.00 0.00 0.00 2.59
233 234 0.831307 GGATAGGCTCTTTCACGGGT 59.169 55.000 0.00 0.00 0.00 5.28
234 235 2.037144 GGATAGGCTCTTTCACGGGTA 58.963 52.381 0.00 0.00 0.00 3.69
235 236 2.223994 GGATAGGCTCTTTCACGGGTAC 60.224 54.545 0.00 0.00 0.00 3.34
237 238 1.447314 GGCTCTTTCACGGGTACGG 60.447 63.158 0.00 0.00 46.48 4.02
238 239 2.098831 GCTCTTTCACGGGTACGGC 61.099 63.158 0.00 0.00 46.48 5.68
239 240 1.804326 CTCTTTCACGGGTACGGCG 60.804 63.158 4.80 4.80 46.48 6.46
300 301 2.481276 GCACAACCTCAAACCCAAGTTC 60.481 50.000 0.00 0.00 34.19 3.01
301 302 3.023832 CACAACCTCAAACCCAAGTTCT 58.976 45.455 0.00 0.00 34.19 3.01
311 312 6.616577 TCAAACCCAAGTTCTTACCCTAATT 58.383 36.000 0.00 0.00 34.19 1.40
318 319 9.250246 CCCAAGTTCTTACCCTAATTGAATTTA 57.750 33.333 0.00 0.00 0.00 1.40
350 351 6.170506 GTGAAGGAAGTACCACATACATGAA 58.829 40.000 0.00 0.00 42.04 2.57
359 360 5.712217 ACCACATACATGAAAATCGTACG 57.288 39.130 9.53 9.53 0.00 3.67
360 361 4.569162 ACCACATACATGAAAATCGTACGG 59.431 41.667 16.52 0.00 0.00 4.02
372 373 6.869913 TGAAAATCGTACGGTACAAAGAATCT 59.130 34.615 16.52 0.00 0.00 2.40
390 391 5.300034 AGAATCTCTCAAACACACATGCAAA 59.700 36.000 0.00 0.00 0.00 3.68
394 395 3.038017 CTCAAACACACATGCAAAGTCG 58.962 45.455 0.00 0.00 0.00 4.18
429 430 1.073177 GCATGCCATTTCACTGTTGC 58.927 50.000 6.36 0.00 0.00 4.17
450 452 4.878397 TGCGTTTTTCAAATTCCCATGTTT 59.122 33.333 0.00 0.00 0.00 2.83
451 453 5.355350 TGCGTTTTTCAAATTCCCATGTTTT 59.645 32.000 0.00 0.00 0.00 2.43
452 454 6.538742 TGCGTTTTTCAAATTCCCATGTTTTA 59.461 30.769 0.00 0.00 0.00 1.52
453 455 7.068955 GCGTTTTTCAAATTCCCATGTTTTAG 58.931 34.615 0.00 0.00 0.00 1.85
454 456 7.042389 GCGTTTTTCAAATTCCCATGTTTTAGA 60.042 33.333 0.00 0.00 0.00 2.10
455 457 8.821894 CGTTTTTCAAATTCCCATGTTTTAGAA 58.178 29.630 0.00 0.00 0.00 2.10
461 463 9.709495 TCAAATTCCCATGTTTTAGAAATTCAG 57.291 29.630 0.00 0.00 0.00 3.02
462 464 8.938906 CAAATTCCCATGTTTTAGAAATTCAGG 58.061 33.333 0.00 0.00 0.00 3.86
463 465 7.797121 ATTCCCATGTTTTAGAAATTCAGGT 57.203 32.000 0.00 0.00 0.00 4.00
464 466 7.610580 TTCCCATGTTTTAGAAATTCAGGTT 57.389 32.000 0.00 0.00 0.00 3.50
465 467 7.227049 TCCCATGTTTTAGAAATTCAGGTTC 57.773 36.000 0.00 0.00 0.00 3.62
466 468 6.780031 TCCCATGTTTTAGAAATTCAGGTTCA 59.220 34.615 0.00 0.00 0.00 3.18
467 469 7.288852 TCCCATGTTTTAGAAATTCAGGTTCAA 59.711 33.333 0.00 0.00 0.00 2.69
468 470 8.096414 CCCATGTTTTAGAAATTCAGGTTCAAT 58.904 33.333 0.00 0.00 0.00 2.57
469 471 9.492973 CCATGTTTTAGAAATTCAGGTTCAATT 57.507 29.630 0.00 0.00 0.00 2.32
478 480 9.048446 AGAAATTCAGGTTCAATTTCACATTTG 57.952 29.630 16.34 0.00 46.26 2.32
479 481 8.961294 AAATTCAGGTTCAATTTCACATTTGA 57.039 26.923 0.00 0.00 29.14 2.69
480 482 8.961294 AATTCAGGTTCAATTTCACATTTGAA 57.039 26.923 0.00 0.00 40.14 2.69
481 483 8.597662 ATTCAGGTTCAATTTCACATTTGAAG 57.402 30.769 0.00 0.00 42.79 3.02
487 489 8.746922 GTTCAATTTCACATTTGAAGCTATGA 57.253 30.769 1.19 0.00 42.79 2.15
488 490 9.195411 GTTCAATTTCACATTTGAAGCTATGAA 57.805 29.630 1.19 2.91 42.79 2.57
489 491 9.761504 TTCAATTTCACATTTGAAGCTATGAAA 57.238 25.926 1.19 0.00 42.79 2.69
490 492 9.761504 TCAATTTCACATTTGAAGCTATGAAAA 57.238 25.926 1.19 2.69 42.79 2.29
514 516 6.723131 AACCGAATTCAGTAACTAAGAAGC 57.277 37.500 6.22 0.00 0.00 3.86
515 517 6.038997 ACCGAATTCAGTAACTAAGAAGCT 57.961 37.500 6.22 0.00 0.00 3.74
516 518 5.869888 ACCGAATTCAGTAACTAAGAAGCTG 59.130 40.000 6.22 0.00 0.00 4.24
517 519 6.100004 CCGAATTCAGTAACTAAGAAGCTGA 58.900 40.000 6.22 0.00 34.80 4.26
518 520 6.758886 CCGAATTCAGTAACTAAGAAGCTGAT 59.241 38.462 6.22 0.00 36.29 2.90
519 521 7.921214 CCGAATTCAGTAACTAAGAAGCTGATA 59.079 37.037 6.22 0.00 36.29 2.15
520 522 8.747666 CGAATTCAGTAACTAAGAAGCTGATAC 58.252 37.037 6.22 0.00 36.29 2.24
521 523 8.950208 AATTCAGTAACTAAGAAGCTGATACC 57.050 34.615 0.00 0.00 36.29 2.73
522 524 7.719871 TTCAGTAACTAAGAAGCTGATACCT 57.280 36.000 0.00 0.00 36.29 3.08
523 525 7.101652 TCAGTAACTAAGAAGCTGATACCTG 57.898 40.000 0.00 0.00 32.09 4.00
524 526 6.663953 TCAGTAACTAAGAAGCTGATACCTGT 59.336 38.462 0.00 0.00 32.09 4.00
525 527 6.754209 CAGTAACTAAGAAGCTGATACCTGTG 59.246 42.308 0.00 0.00 0.00 3.66
526 528 6.663953 AGTAACTAAGAAGCTGATACCTGTGA 59.336 38.462 0.00 0.00 0.00 3.58
527 529 6.360370 AACTAAGAAGCTGATACCTGTGAA 57.640 37.500 0.00 0.00 0.00 3.18
528 530 6.360370 ACTAAGAAGCTGATACCTGTGAAA 57.640 37.500 0.00 0.00 0.00 2.69
529 531 6.769512 ACTAAGAAGCTGATACCTGTGAAAA 58.230 36.000 0.00 0.00 0.00 2.29
530 532 7.398024 ACTAAGAAGCTGATACCTGTGAAAAT 58.602 34.615 0.00 0.00 0.00 1.82
531 533 6.506500 AAGAAGCTGATACCTGTGAAAATG 57.493 37.500 0.00 0.00 0.00 2.32
532 534 5.564550 AGAAGCTGATACCTGTGAAAATGT 58.435 37.500 0.00 0.00 0.00 2.71
533 535 5.413833 AGAAGCTGATACCTGTGAAAATGTG 59.586 40.000 0.00 0.00 0.00 3.21
534 536 4.910195 AGCTGATACCTGTGAAAATGTGA 58.090 39.130 0.00 0.00 0.00 3.58
535 537 5.316167 AGCTGATACCTGTGAAAATGTGAA 58.684 37.500 0.00 0.00 0.00 3.18
536 538 5.769662 AGCTGATACCTGTGAAAATGTGAAA 59.230 36.000 0.00 0.00 0.00 2.69
568 570 6.885735 AAAGGATGTTGAGTTTGTTTTTCG 57.114 33.333 0.00 0.00 0.00 3.46
577 579 4.942483 TGAGTTTGTTTTTCGTAGGTCCAA 59.058 37.500 0.00 0.00 0.00 3.53
578 580 5.065474 TGAGTTTGTTTTTCGTAGGTCCAAG 59.935 40.000 0.00 0.00 0.00 3.61
579 581 4.945543 AGTTTGTTTTTCGTAGGTCCAAGT 59.054 37.500 0.00 0.00 0.00 3.16
580 582 6.114767 AGTTTGTTTTTCGTAGGTCCAAGTA 58.885 36.000 0.00 0.00 0.00 2.24
583 585 7.571080 TTGTTTTTCGTAGGTCCAAGTAAAT 57.429 32.000 0.00 0.00 0.00 1.40
589 591 9.729281 TTTTCGTAGGTCCAAGTAAATAAATCT 57.271 29.630 0.00 0.00 0.00 2.40
591 593 8.070034 TCGTAGGTCCAAGTAAATAAATCTGA 57.930 34.615 0.00 0.00 0.00 3.27
592 594 8.195436 TCGTAGGTCCAAGTAAATAAATCTGAG 58.805 37.037 0.00 0.00 0.00 3.35
593 595 7.042658 CGTAGGTCCAAGTAAATAAATCTGAGC 60.043 40.741 0.00 0.00 0.00 4.26
594 596 6.963322 AGGTCCAAGTAAATAAATCTGAGCT 58.037 36.000 0.00 0.00 0.00 4.09
595 597 7.406104 AGGTCCAAGTAAATAAATCTGAGCTT 58.594 34.615 0.00 0.00 0.00 3.74
596 598 8.548877 AGGTCCAAGTAAATAAATCTGAGCTTA 58.451 33.333 0.00 0.00 0.00 3.09
597 599 9.174166 GGTCCAAGTAAATAAATCTGAGCTTAA 57.826 33.333 0.00 0.00 0.00 1.85
611 613 9.468532 AATCTGAGCTTAAATTTGAAACTTGAC 57.531 29.630 0.00 0.00 0.00 3.18
612 614 7.995289 TCTGAGCTTAAATTTGAAACTTGACA 58.005 30.769 0.00 0.00 0.00 3.58
613 615 8.632679 TCTGAGCTTAAATTTGAAACTTGACAT 58.367 29.630 0.00 0.00 0.00 3.06
614 616 8.578308 TGAGCTTAAATTTGAAACTTGACATG 57.422 30.769 0.00 0.00 0.00 3.21
615 617 7.169645 TGAGCTTAAATTTGAAACTTGACATGC 59.830 33.333 0.00 0.00 0.00 4.06
616 618 7.212274 AGCTTAAATTTGAAACTTGACATGCT 58.788 30.769 0.00 0.00 0.00 3.79
617 619 7.712205 AGCTTAAATTTGAAACTTGACATGCTT 59.288 29.630 0.00 0.00 0.00 3.91
618 620 7.795272 GCTTAAATTTGAAACTTGACATGCTTG 59.205 33.333 0.00 0.00 0.00 4.01
619 621 8.715191 TTAAATTTGAAACTTGACATGCTTGT 57.285 26.923 4.68 4.68 39.32 3.16
626 628 7.935520 TGAAACTTGACATGCTTGTAATGTTA 58.064 30.769 17.00 5.12 38.37 2.41
788 790 7.709947 AGATATATAGAAACACCGAAACACGA 58.290 34.615 0.00 0.00 45.77 4.35
831 833 2.545596 AACCCCGAAAACGAACGGC 61.546 57.895 0.00 0.00 46.59 5.68
857 861 2.136298 TGAAGCTTGACAACCAACCA 57.864 45.000 2.10 0.00 0.00 3.67
972 1798 0.107508 GCGTCCCCTAAACCCTAACC 60.108 60.000 0.00 0.00 0.00 2.85
1113 1939 1.339644 GGGAGGGCACATACGGGTAA 61.340 60.000 0.00 0.00 0.00 2.85
1124 1950 0.819259 TACGGGTAAGCGCCTATCGT 60.819 55.000 17.12 17.12 41.07 3.73
1143 1969 0.047802 TCCCCTCAATCCCAATCCCT 59.952 55.000 0.00 0.00 0.00 4.20
1300 2128 2.470821 CGAGGGCGTAAGTATCCTTTG 58.529 52.381 0.00 0.00 41.68 2.77
1301 2129 2.159142 CGAGGGCGTAAGTATCCTTTGT 60.159 50.000 0.00 0.00 41.68 2.83
1510 2349 6.512297 AGAACATCATGTTTGGTTGTTAACC 58.488 36.000 4.04 3.81 45.63 2.85
1861 2912 3.402628 ACTGGTTGCTACAAGTGTAGG 57.597 47.619 17.87 5.02 46.07 3.18
1869 2920 3.195610 TGCTACAAGTGTAGGTCCTGATG 59.804 47.826 17.87 0.00 46.07 3.07
1992 3043 4.004982 AGACAATTTGCATGAATTTGGGC 58.995 39.130 0.00 0.00 31.75 5.36
2014 3065 4.608445 GCGTTATGTTGTGACAGTGACTTC 60.608 45.833 0.00 0.00 39.58 3.01
2198 3249 6.010219 ACAGGTATTGCAGTGTTATCCTTTT 58.990 36.000 0.00 0.00 0.00 2.27
2211 3262 6.198966 GTGTTATCCTTTTGTCTTGCAAGTTG 59.801 38.462 25.19 10.28 38.47 3.16
2395 3446 3.372025 GCCTGGAAAGAATGAGGTATGGT 60.372 47.826 0.00 0.00 0.00 3.55
2662 3982 9.722184 ATGAAGAGACTTGGAATATATGTCATG 57.278 33.333 0.00 0.00 0.00 3.07
2673 3993 8.596293 TGGAATATATGTCATGATGTGAAGCTA 58.404 33.333 0.00 0.00 38.90 3.32
2738 4064 3.639094 CCTGGGGAGTACTAGAGATTGTG 59.361 52.174 0.00 0.00 0.00 3.33
2740 4066 3.301274 GGGGAGTACTAGAGATTGTGCT 58.699 50.000 0.00 0.00 32.11 4.40
2741 4067 3.707102 GGGGAGTACTAGAGATTGTGCTT 59.293 47.826 0.00 0.00 29.71 3.91
2742 4068 4.894114 GGGGAGTACTAGAGATTGTGCTTA 59.106 45.833 0.00 0.00 29.71 3.09
2743 4069 5.221283 GGGGAGTACTAGAGATTGTGCTTAC 60.221 48.000 0.00 0.00 29.71 2.34
2746 4072 7.284944 GGGAGTACTAGAGATTGTGCTTACTTA 59.715 40.741 0.00 0.00 29.71 2.24
2748 4074 8.810990 AGTACTAGAGATTGTGCTTACTTACT 57.189 34.615 0.00 0.00 0.00 2.24
2749 4075 9.245481 AGTACTAGAGATTGTGCTTACTTACTT 57.755 33.333 0.00 0.00 0.00 2.24
2755 4081 9.857957 AGAGATTGTGCTTACTTACTTACTTAC 57.142 33.333 0.00 0.00 0.00 2.34
2756 4082 8.684973 AGATTGTGCTTACTTACTTACTTACG 57.315 34.615 0.00 0.00 0.00 3.18
2757 4083 8.517878 AGATTGTGCTTACTTACTTACTTACGA 58.482 33.333 0.00 0.00 0.00 3.43
2759 4085 8.511465 TTGTGCTTACTTACTTACTTACGAAG 57.489 34.615 0.00 0.00 0.00 3.79
2760 4086 6.583806 TGTGCTTACTTACTTACTTACGAAGC 59.416 38.462 0.00 0.00 37.79 3.86
2761 4087 6.034363 GTGCTTACTTACTTACTTACGAAGCC 59.966 42.308 0.00 0.00 36.74 4.35
2762 4088 6.071728 TGCTTACTTACTTACTTACGAAGCCT 60.072 38.462 0.00 0.00 36.74 4.58
2764 4090 7.330454 GCTTACTTACTTACTTACGAAGCCTTT 59.670 37.037 0.00 0.00 32.54 3.11
2768 4094 9.363763 ACTTACTTACTTACGAAGCCTTTTATC 57.636 33.333 0.00 0.00 0.00 1.75
2769 4095 8.707938 TTACTTACTTACGAAGCCTTTTATCC 57.292 34.615 0.00 0.00 0.00 2.59
2771 4097 4.563140 ACTTACGAAGCCTTTTATCCCA 57.437 40.909 0.00 0.00 0.00 4.37
2772 4098 4.913784 ACTTACGAAGCCTTTTATCCCAA 58.086 39.130 0.00 0.00 0.00 4.12
2773 4099 5.318630 ACTTACGAAGCCTTTTATCCCAAA 58.681 37.500 0.00 0.00 0.00 3.28
2774 4100 5.182570 ACTTACGAAGCCTTTTATCCCAAAC 59.817 40.000 0.00 0.00 0.00 2.93
2776 4102 3.892588 ACGAAGCCTTTTATCCCAAACAA 59.107 39.130 0.00 0.00 0.00 2.83
2778 4104 4.022329 CGAAGCCTTTTATCCCAAACAAGT 60.022 41.667 0.00 0.00 0.00 3.16
2779 4105 5.508994 CGAAGCCTTTTATCCCAAACAAGTT 60.509 40.000 0.00 0.00 0.00 2.66
2780 4106 5.213891 AGCCTTTTATCCCAAACAAGTTG 57.786 39.130 0.00 0.00 36.94 3.16
2789 4115 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
2790 4116 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
2792 4118 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
2795 4121 4.567857 ACAAGTTGGGGTAGGCTAGATAT 58.432 43.478 7.96 0.00 0.00 1.63
2797 4123 4.487282 AGTTGGGGTAGGCTAGATATGA 57.513 45.455 0.00 0.00 0.00 2.15
2798 4124 4.827789 AGTTGGGGTAGGCTAGATATGAA 58.172 43.478 0.00 0.00 0.00 2.57
2799 4125 5.224441 AGTTGGGGTAGGCTAGATATGAAA 58.776 41.667 0.00 0.00 0.00 2.69
2800 4126 5.071923 AGTTGGGGTAGGCTAGATATGAAAC 59.928 44.000 0.00 0.00 0.00 2.78
2801 4127 3.908103 TGGGGTAGGCTAGATATGAAACC 59.092 47.826 0.00 0.00 0.00 3.27
2802 4128 3.263681 GGGGTAGGCTAGATATGAAACCC 59.736 52.174 7.65 7.65 43.82 4.11
2805 4131 5.073280 GGGTAGGCTAGATATGAAACCCTTT 59.927 44.000 8.73 0.00 41.75 3.11
2806 4132 6.231951 GGTAGGCTAGATATGAAACCCTTTC 58.768 44.000 0.00 0.00 40.08 2.62
2814 4140 2.249844 TGAAACCCTTTCACGAGGAC 57.750 50.000 0.00 0.00 44.21 3.85
2815 4141 1.766496 TGAAACCCTTTCACGAGGACT 59.234 47.619 0.00 0.00 44.21 3.85
2816 4142 2.171870 TGAAACCCTTTCACGAGGACTT 59.828 45.455 0.00 0.00 44.21 3.01
2817 4143 2.545537 AACCCTTTCACGAGGACTTC 57.454 50.000 0.00 0.00 39.25 3.01
2820 4146 0.685097 CCTTTCACGAGGACTTCCCA 59.315 55.000 0.00 0.00 39.25 4.37
2821 4147 1.338200 CCTTTCACGAGGACTTCCCAG 60.338 57.143 0.00 0.00 39.25 4.45
2822 4148 0.685097 TTTCACGAGGACTTCCCAGG 59.315 55.000 0.00 0.00 37.41 4.45
2823 4149 0.178944 TTCACGAGGACTTCCCAGGA 60.179 55.000 0.00 0.00 37.41 3.86
2824 4150 0.612174 TCACGAGGACTTCCCAGGAG 60.612 60.000 0.00 0.00 37.41 3.69
2826 4152 1.305381 CGAGGACTTCCCAGGAGGT 60.305 63.158 0.31 0.31 37.15 3.85
2827 4153 1.324005 CGAGGACTTCCCAGGAGGTC 61.324 65.000 18.15 18.15 46.33 3.85
2830 4156 1.984020 GACTTCCCAGGAGGTCACC 59.016 63.158 20.66 0.00 46.32 4.02
2831 4157 1.539124 ACTTCCCAGGAGGTCACCC 60.539 63.158 0.00 0.00 36.75 4.61
2833 4159 0.916358 CTTCCCAGGAGGTCACCCAT 60.916 60.000 0.00 0.00 36.75 4.00
2834 4160 0.914417 TTCCCAGGAGGTCACCCATC 60.914 60.000 0.00 0.00 36.75 3.51
2835 4161 2.378634 CCCAGGAGGTCACCCATCC 61.379 68.421 0.00 0.00 0.00 3.51
2836 4162 1.307343 CCAGGAGGTCACCCATCCT 60.307 63.158 0.00 0.00 38.30 3.24
2837 4163 0.031111 CCAGGAGGTCACCCATCCTA 60.031 60.000 4.27 0.00 36.69 2.94
2838 4164 1.418334 CAGGAGGTCACCCATCCTAG 58.582 60.000 4.27 0.00 36.69 3.02
2839 4165 1.019650 AGGAGGTCACCCATCCTAGT 58.980 55.000 2.60 0.00 36.91 2.57
2841 4167 2.091222 AGGAGGTCACCCATCCTAGTAC 60.091 54.545 2.60 0.00 36.91 2.73
2842 4168 2.091222 GGAGGTCACCCATCCTAGTACT 60.091 54.545 0.00 0.00 33.83 2.73
2843 4169 3.139770 GGAGGTCACCCATCCTAGTACTA 59.860 52.174 1.89 1.89 33.83 1.82
2845 4171 3.792684 AGGTCACCCATCCTAGTACTACT 59.207 47.826 0.00 0.00 31.66 2.57
2846 4172 4.141205 AGGTCACCCATCCTAGTACTACTC 60.141 50.000 0.00 0.00 31.66 2.59
2847 4173 4.141205 GGTCACCCATCCTAGTACTACTCT 60.141 50.000 0.00 0.00 0.00 3.24
2849 4175 4.066490 CACCCATCCTAGTACTACTCTCG 58.934 52.174 0.00 0.00 0.00 4.04
2850 4176 3.075884 CCCATCCTAGTACTACTCTCGC 58.924 54.545 0.00 0.00 0.00 5.03
2851 4177 3.075884 CCATCCTAGTACTACTCTCGCC 58.924 54.545 0.00 0.00 0.00 5.54
2852 4178 2.926778 TCCTAGTACTACTCTCGCCC 57.073 55.000 0.00 0.00 0.00 6.13
2853 4179 2.121948 TCCTAGTACTACTCTCGCCCA 58.878 52.381 0.00 0.00 0.00 5.36
2854 4180 2.507058 TCCTAGTACTACTCTCGCCCAA 59.493 50.000 0.00 0.00 0.00 4.12
2855 4181 3.054139 TCCTAGTACTACTCTCGCCCAAA 60.054 47.826 0.00 0.00 0.00 3.28
2856 4182 3.890147 CCTAGTACTACTCTCGCCCAAAT 59.110 47.826 0.00 0.00 0.00 2.32
2857 4183 3.802948 AGTACTACTCTCGCCCAAATG 57.197 47.619 0.00 0.00 0.00 2.32
2880 4206 3.056821 GGTTTCATACCCAAAAGACTGGC 60.057 47.826 0.00 0.00 41.43 4.85
2883 4209 4.487714 TCATACCCAAAAGACTGGCTAG 57.512 45.455 0.00 0.00 34.88 3.42
2884 4210 3.844211 TCATACCCAAAAGACTGGCTAGT 59.156 43.478 0.69 0.69 40.66 2.57
2885 4211 4.288626 TCATACCCAAAAGACTGGCTAGTT 59.711 41.667 3.47 0.00 37.25 2.24
2886 4212 3.595190 ACCCAAAAGACTGGCTAGTTT 57.405 42.857 3.47 0.00 37.25 2.66
2887 4213 3.910989 ACCCAAAAGACTGGCTAGTTTT 58.089 40.909 3.47 1.40 37.25 2.43
2888 4214 4.286707 ACCCAAAAGACTGGCTAGTTTTT 58.713 39.130 12.22 12.22 41.44 1.94
2890 4216 5.301045 ACCCAAAAGACTGGCTAGTTTTTAC 59.699 40.000 17.28 0.00 39.50 2.01
2892 4218 5.008316 CCAAAAGACTGGCTAGTTTTTACGT 59.992 40.000 17.28 1.78 39.50 3.57
2893 4219 6.459161 CCAAAAGACTGGCTAGTTTTTACGTT 60.459 38.462 17.28 1.45 39.50 3.99
2894 4220 5.668558 AAGACTGGCTAGTTTTTACGTTG 57.331 39.130 3.47 0.00 37.25 4.10
2895 4221 4.062991 AGACTGGCTAGTTTTTACGTTGG 58.937 43.478 3.47 0.00 37.25 3.77
2896 4222 2.551032 ACTGGCTAGTTTTTACGTTGGC 59.449 45.455 0.00 0.00 31.66 4.52
2898 4224 2.809696 TGGCTAGTTTTTACGTTGGCTC 59.190 45.455 0.00 0.00 0.00 4.70
2899 4225 2.159747 GGCTAGTTTTTACGTTGGCTCG 60.160 50.000 0.00 1.70 0.00 5.03
2901 4227 0.589708 AGTTTTTACGTTGGCTCGCC 59.410 50.000 0.00 0.00 0.00 5.54
2913 4239 1.153369 GCTCGCCAAGCCTATCACA 60.153 57.895 0.00 0.00 45.92 3.58
2914 4240 0.744414 GCTCGCCAAGCCTATCACAA 60.744 55.000 0.00 0.00 45.92 3.33
2915 4241 1.009829 CTCGCCAAGCCTATCACAAC 58.990 55.000 0.00 0.00 0.00 3.32
2925 4251 6.240002 CCAAGCCTATCACAACCCTTAGATAT 60.240 42.308 0.00 0.00 0.00 1.63
2929 4255 7.072454 AGCCTATCACAACCCTTAGATATGAAA 59.928 37.037 0.00 0.00 0.00 2.69
2931 4257 7.661847 CCTATCACAACCCTTAGATATGAAACC 59.338 40.741 0.00 0.00 0.00 3.27
2933 4259 5.491078 TCACAACCCTTAGATATGAAACCCT 59.509 40.000 0.00 0.00 0.00 4.34
2945 4271 1.766496 TGAAACCCTTTCACGAGGACT 59.234 47.619 0.00 0.00 44.21 3.85
2947 4273 2.545537 AACCCTTTCACGAGGACTTC 57.454 50.000 0.00 0.00 39.25 3.01
2949 4275 0.036294 CCCTTTCACGAGGACTTCCC 60.036 60.000 0.00 0.00 39.25 3.97
2950 4276 0.685097 CCTTTCACGAGGACTTCCCA 59.315 55.000 0.00 0.00 39.25 4.37
2951 4277 1.338200 CCTTTCACGAGGACTTCCCAG 60.338 57.143 0.00 0.00 39.25 4.45
2952 4278 0.685097 TTTCACGAGGACTTCCCAGG 59.315 55.000 0.00 0.00 37.41 4.45
2954 4280 0.612174 TCACGAGGACTTCCCAGGAG 60.612 60.000 0.00 0.00 37.41 3.69
2955 4281 1.305381 ACGAGGACTTCCCAGGAGG 60.305 63.158 0.00 0.00 37.41 4.30
2956 4282 1.305381 CGAGGACTTCCCAGGAGGT 60.305 63.158 0.31 0.31 37.15 3.85
2957 4283 1.324005 CGAGGACTTCCCAGGAGGTC 61.324 65.000 18.15 18.15 46.33 3.85
2961 4287 1.539124 ACTTCCCAGGAGGTCACCC 60.539 63.158 0.00 0.00 36.75 4.61
2962 4288 1.538876 CTTCCCAGGAGGTCACCCA 60.539 63.158 0.00 0.00 36.75 4.51
2963 4289 0.916358 CTTCCCAGGAGGTCACCCAT 60.916 60.000 0.00 0.00 36.75 4.00
2964 4290 0.914417 TTCCCAGGAGGTCACCCATC 60.914 60.000 0.00 0.00 36.75 3.51
2965 4291 2.378634 CCCAGGAGGTCACCCATCC 61.379 68.421 0.00 0.00 0.00 3.51
2966 4292 1.307343 CCAGGAGGTCACCCATCCT 60.307 63.158 0.00 0.00 38.30 3.24
2968 4294 1.418334 CAGGAGGTCACCCATCCTAG 58.582 60.000 4.27 0.00 36.69 3.02
2969 4295 1.019650 AGGAGGTCACCCATCCTAGT 58.980 55.000 2.60 0.00 36.91 2.57
2970 4296 2.091278 CAGGAGGTCACCCATCCTAGTA 60.091 54.545 4.27 0.00 36.69 1.82
2972 4298 2.091222 GGAGGTCACCCATCCTAGTACT 60.091 54.545 0.00 0.00 33.83 2.73
2973 4299 3.139770 GGAGGTCACCCATCCTAGTACTA 59.860 52.174 1.89 1.89 33.83 1.82
2974 4300 4.143543 GAGGTCACCCATCCTAGTACTAC 58.856 52.174 0.00 0.00 33.83 2.73
2975 4301 3.792684 AGGTCACCCATCCTAGTACTACT 59.207 47.826 0.00 0.00 31.66 2.57
2976 4302 4.141205 AGGTCACCCATCCTAGTACTACTC 60.141 50.000 0.00 0.00 31.66 2.59
2977 4303 4.141205 GGTCACCCATCCTAGTACTACTCT 60.141 50.000 0.00 0.00 0.00 3.24
2978 4304 5.065235 GTCACCCATCCTAGTACTACTCTC 58.935 50.000 0.00 0.00 0.00 3.20
2979 4305 4.066490 CACCCATCCTAGTACTACTCTCG 58.934 52.174 0.00 0.00 0.00 4.04
2980 4306 3.075884 CCCATCCTAGTACTACTCTCGC 58.924 54.545 0.00 0.00 0.00 5.03
2982 4308 3.998341 CCATCCTAGTACTACTCTCGCTC 59.002 52.174 0.00 0.00 0.00 5.03
2983 4309 4.503469 CCATCCTAGTACTACTCTCGCTCA 60.503 50.000 0.00 0.00 0.00 4.26
2984 4310 4.750021 TCCTAGTACTACTCTCGCTCAA 57.250 45.455 0.00 0.00 0.00 3.02
2985 4311 5.293319 TCCTAGTACTACTCTCGCTCAAT 57.707 43.478 0.00 0.00 0.00 2.57
2986 4312 5.682659 TCCTAGTACTACTCTCGCTCAATT 58.317 41.667 0.00 0.00 0.00 2.32
2987 4313 5.527951 TCCTAGTACTACTCTCGCTCAATTG 59.472 44.000 0.00 0.00 0.00 2.32
2988 4314 4.640789 AGTACTACTCTCGCTCAATTGG 57.359 45.455 5.42 0.00 0.00 3.16
2989 4315 2.969628 ACTACTCTCGCTCAATTGGG 57.030 50.000 5.42 2.47 0.00 4.12
2992 4318 2.568623 ACTCTCGCTCAATTGGGTTT 57.431 45.000 7.27 0.00 0.00 3.27
2993 4319 2.427506 ACTCTCGCTCAATTGGGTTTC 58.572 47.619 7.27 0.00 0.00 2.78
2995 4321 3.012518 CTCTCGCTCAATTGGGTTTCAT 58.987 45.455 7.27 0.00 0.00 2.57
2997 4323 3.938963 TCTCGCTCAATTGGGTTTCATAC 59.061 43.478 7.27 0.00 0.00 2.39
2998 4324 3.013921 TCGCTCAATTGGGTTTCATACC 58.986 45.455 7.27 0.00 46.99 2.73
2999 4325 3.016736 CGCTCAATTGGGTTTCATACCT 58.983 45.455 7.27 0.00 46.86 3.08
3000 4326 4.080807 TCGCTCAATTGGGTTTCATACCTA 60.081 41.667 7.27 0.00 46.86 3.08
3001 4327 4.821805 CGCTCAATTGGGTTTCATACCTAT 59.178 41.667 7.27 0.00 46.86 2.57
3002 4328 5.277974 CGCTCAATTGGGTTTCATACCTATG 60.278 44.000 7.27 0.00 46.86 2.23
3004 4330 5.454062 TCAATTGGGTTTCATACCTATGGG 58.546 41.667 5.42 0.00 46.86 4.00
3005 4331 5.194740 TCAATTGGGTTTCATACCTATGGGA 59.805 40.000 0.25 0.00 46.86 4.37
3006 4332 4.513406 TTGGGTTTCATACCTATGGGAC 57.487 45.455 0.25 0.00 46.86 4.46
3009 4335 3.181443 GGGTTTCATACCTATGGGACTGG 60.181 52.174 0.25 0.00 46.86 4.00
3010 4336 3.477530 GTTTCATACCTATGGGACTGGC 58.522 50.000 0.25 0.00 34.50 4.85
3012 4338 3.915346 TCATACCTATGGGACTGGCTA 57.085 47.619 0.25 0.00 34.50 3.93
3014 4340 3.142217 TCATACCTATGGGACTGGCTAGT 59.858 47.826 0.69 0.69 35.65 2.57
3015 4341 2.570386 ACCTATGGGACTGGCTAGTT 57.430 50.000 3.47 0.00 37.25 2.24
3016 4342 2.846950 ACCTATGGGACTGGCTAGTTT 58.153 47.619 3.47 0.00 37.25 2.66
3017 4343 3.190439 ACCTATGGGACTGGCTAGTTTT 58.810 45.455 3.47 0.00 37.25 2.43
3020 4346 5.123936 CCTATGGGACTGGCTAGTTTTTAC 58.876 45.833 3.47 0.00 37.25 2.01
3021 4347 3.048337 TGGGACTGGCTAGTTTTTACG 57.952 47.619 3.47 0.00 37.25 3.18
3022 4348 2.369532 TGGGACTGGCTAGTTTTTACGT 59.630 45.455 3.47 0.00 37.25 3.57
3023 4349 3.181452 TGGGACTGGCTAGTTTTTACGTT 60.181 43.478 3.47 0.00 37.25 3.99
3024 4350 3.187842 GGGACTGGCTAGTTTTTACGTTG 59.812 47.826 3.47 0.00 37.25 4.10
3025 4351 3.187842 GGACTGGCTAGTTTTTACGTTGG 59.812 47.826 3.47 0.00 37.25 3.77
3028 4354 2.809696 TGGCTAGTTTTTACGTTGGCTC 59.190 45.455 0.00 0.00 0.00 4.70
3030 4356 2.723923 GCTAGTTTTTACGTTGGCTCGC 60.724 50.000 0.00 0.00 0.00 5.03
3042 4368 3.724494 GCTCGCCAAGCCTATCAC 58.276 61.111 0.00 0.00 45.92 3.06
3044 4370 0.744414 GCTCGCCAAGCCTATCACAA 60.744 55.000 0.00 0.00 45.92 3.33
3046 4372 0.392461 TCGCCAAGCCTATCACAACC 60.392 55.000 0.00 0.00 0.00 3.77
3047 4373 1.376609 CGCCAAGCCTATCACAACCC 61.377 60.000 0.00 0.00 0.00 4.11
3048 4374 0.034089 GCCAAGCCTATCACAACCCT 60.034 55.000 0.00 0.00 0.00 4.34
3050 4376 1.408822 CCAAGCCTATCACAACCCTCC 60.409 57.143 0.00 0.00 0.00 4.30
3052 4378 1.501582 AGCCTATCACAACCCTCCTC 58.498 55.000 0.00 0.00 0.00 3.71
3053 4379 0.470341 GCCTATCACAACCCTCCTCC 59.530 60.000 0.00 0.00 0.00 4.30
3054 4380 1.972207 GCCTATCACAACCCTCCTCCT 60.972 57.143 0.00 0.00 0.00 3.69
3056 4382 2.846827 CCTATCACAACCCTCCTCCTTT 59.153 50.000 0.00 0.00 0.00 3.11
3059 4385 1.982958 TCACAACCCTCCTCCTTTACC 59.017 52.381 0.00 0.00 0.00 2.85
3061 4387 0.252197 CAACCCTCCTCCTTTACCCG 59.748 60.000 0.00 0.00 0.00 5.28
3062 4388 0.912968 AACCCTCCTCCTTTACCCGG 60.913 60.000 0.00 0.00 0.00 5.73
3063 4389 2.070650 CCCTCCTCCTTTACCCGGG 61.071 68.421 22.25 22.25 0.00 5.73
3065 4391 1.689582 CTCCTCCTTTACCCGGGCT 60.690 63.158 24.08 10.93 0.00 5.19
3066 4392 1.229723 TCCTCCTTTACCCGGGCTT 60.230 57.895 24.08 4.08 0.00 4.35
3067 4393 1.077716 CCTCCTTTACCCGGGCTTG 60.078 63.158 24.08 8.51 0.00 4.01
3068 4394 1.077716 CTCCTTTACCCGGGCTTGG 60.078 63.158 24.08 17.99 0.00 3.61
3078 4404 3.489513 GGGCTTGGGACCGGCTAT 61.490 66.667 0.00 0.00 0.00 2.97
3079 4405 2.203209 GGCTTGGGACCGGCTATG 60.203 66.667 0.00 0.00 0.00 2.23
3080 4406 2.902343 GCTTGGGACCGGCTATGC 60.902 66.667 0.00 0.00 0.00 3.14
3081 4407 2.203209 CTTGGGACCGGCTATGCC 60.203 66.667 0.00 0.00 46.75 4.40
3094 4420 4.464069 GGCTATGCCTAGAAGACATAGG 57.536 50.000 16.76 0.00 46.69 2.57
3100 4426 2.588620 CCTAGAAGACATAGGCGGAGT 58.411 52.381 0.00 0.00 33.76 3.85
3101 4427 2.959707 CCTAGAAGACATAGGCGGAGTT 59.040 50.000 0.00 0.00 33.76 3.01
3119 4445 5.449314 CGGAGTTGGAGTACTAGAGATTGTG 60.449 48.000 0.00 0.00 0.00 3.33
3147 4473 8.947055 ATGTTGCAAAATTATCCTGTTTATCC 57.053 30.769 0.00 0.00 0.00 2.59
3153 4479 9.860898 GCAAAATTATCCTGTTTATCCATATCC 57.139 33.333 0.00 0.00 0.00 2.59
3183 4509 5.106317 ACGGCAACACATCCTACTATTTTTG 60.106 40.000 0.00 0.00 0.00 2.44
3203 4529 7.427989 TTTTGTACTACTCGGGGAATATCTT 57.572 36.000 0.00 0.00 0.00 2.40
3255 4581 4.600111 TCCTACAACAAATCCTACTTGGGT 59.400 41.667 0.00 0.00 36.20 4.51
3310 4636 6.800072 ACTTGGTTATGGAAGGAAAAACAA 57.200 33.333 0.00 0.00 0.00 2.83
3338 4667 5.880054 ATGTTTGTACTCCTGTTATGTGC 57.120 39.130 0.00 0.00 0.00 4.57
3361 4690 4.749245 AATGTTGCTCTTGTTAGTTCGG 57.251 40.909 0.00 0.00 0.00 4.30
3363 4692 3.799366 TGTTGCTCTTGTTAGTTCGGAA 58.201 40.909 0.00 0.00 0.00 4.30
3436 4766 4.969484 ACTTGGTTACAGTAGGGAAACAG 58.031 43.478 0.00 0.00 0.00 3.16
3459 4789 7.402071 ACAGATTCCATTCTTGTAGTAACCCTA 59.598 37.037 0.00 0.00 0.00 3.53
3489 4819 6.003326 TGAAAATAGAAGTGCACCAATCTCA 58.997 36.000 14.63 6.47 0.00 3.27
3504 4834 7.171337 GCACCAATCTCATTGTAAATGTTTTGT 59.829 33.333 0.26 0.00 38.59 2.83
3525 4855 5.734720 TGTAAGTTAGGGAATGCTTCTCTG 58.265 41.667 8.13 0.00 41.58 3.35
3542 4872 2.620115 CTCTGCTTTGCCAAGAGAAACA 59.380 45.455 0.86 0.00 30.57 2.83
3544 4874 4.397420 TCTGCTTTGCCAAGAGAAACATA 58.603 39.130 0.86 0.00 30.57 2.29
3565 4895 1.849977 ACTTAACTCCTCCGTCCTCC 58.150 55.000 0.00 0.00 0.00 4.30
3617 4947 1.858399 GCGTGGTTCTTTTCGTGGTTG 60.858 52.381 0.00 0.00 0.00 3.77
3650 4980 1.382420 CTCCCTGTCTAGCCCAGCT 60.382 63.158 0.00 0.00 43.41 4.24
3654 4984 0.326264 CCTGTCTAGCCCAGCTGTTT 59.674 55.000 13.81 0.00 40.10 2.83
3655 4985 1.271597 CCTGTCTAGCCCAGCTGTTTT 60.272 52.381 13.81 0.00 40.10 2.43
3656 4986 2.508526 CTGTCTAGCCCAGCTGTTTTT 58.491 47.619 13.81 0.00 40.10 1.94
3706 5036 5.543507 ATCTGGAATCACCTAGCACTAAG 57.456 43.478 0.00 0.00 39.86 2.18
3707 5037 4.353777 TCTGGAATCACCTAGCACTAAGT 58.646 43.478 0.00 0.00 39.86 2.24
3708 5038 5.516044 TCTGGAATCACCTAGCACTAAGTA 58.484 41.667 0.00 0.00 39.86 2.24
3709 5039 6.136857 TCTGGAATCACCTAGCACTAAGTAT 58.863 40.000 0.00 0.00 39.86 2.12
3710 5040 7.295340 TCTGGAATCACCTAGCACTAAGTATA 58.705 38.462 0.00 0.00 39.86 1.47
3711 5041 7.950684 TCTGGAATCACCTAGCACTAAGTATAT 59.049 37.037 0.00 0.00 39.86 0.86
3712 5042 8.492415 TGGAATCACCTAGCACTAAGTATATT 57.508 34.615 0.00 0.00 39.86 1.28
3713 5043 8.934697 TGGAATCACCTAGCACTAAGTATATTT 58.065 33.333 0.00 0.00 39.86 1.40
3714 5044 9.209175 GGAATCACCTAGCACTAAGTATATTTG 57.791 37.037 0.00 0.00 35.41 2.32
3715 5045 9.765795 GAATCACCTAGCACTAAGTATATTTGT 57.234 33.333 0.00 0.00 0.00 2.83
3717 5047 8.942338 TCACCTAGCACTAAGTATATTTGTTG 57.058 34.615 0.00 0.00 0.00 3.33
3866 5197 0.662970 CGGGTGTGACAAAAATGCCG 60.663 55.000 0.00 0.00 0.00 5.69
4017 5356 4.900635 AGAGTGTTTGCTTACTTTGTGG 57.099 40.909 0.00 0.00 0.00 4.17
4102 5441 7.323656 CGTCAAAGGTATAGTTGCTTCTTTTTG 59.676 37.037 0.00 0.00 0.00 2.44
4120 5459 9.606631 TTCTTTTTGGTGTTTGCTTACATTTAT 57.393 25.926 0.00 0.00 0.00 1.40
4159 5498 1.035139 AAGTTTGTGAGCCTGGCTTG 58.965 50.000 24.26 0.00 39.88 4.01
4174 5513 4.635324 CCTGGCTTGTTTGTTCATGTTTTT 59.365 37.500 0.00 0.00 0.00 1.94
4326 5665 0.462047 ATGCTCGTAGGCCTTTTCCG 60.462 55.000 12.58 9.13 0.00 4.30
4468 5807 4.712476 AGGCTTCACATGAATATCAGACC 58.288 43.478 0.00 0.00 33.01 3.85
4535 5874 3.700577 CGGCAAAAGACGCATCATT 57.299 47.368 0.00 0.00 0.00 2.57
5096 6450 9.830975 ACTTTAATTTAACTGATGTGCCTTTTT 57.169 25.926 0.00 0.00 0.00 1.94
5323 6743 6.824958 AGAAGCTTATTTGGGGACATACTA 57.175 37.500 0.00 0.00 42.32 1.82
5324 6744 7.208064 AGAAGCTTATTTGGGGACATACTAA 57.792 36.000 0.00 0.00 42.32 2.24
5410 6889 5.175859 TGAAATATTGTCGAGGTTCAGGTC 58.824 41.667 0.00 0.00 0.00 3.85
5454 6933 1.543358 CTTGGCCTTCTTCTTTGGCTC 59.457 52.381 3.32 0.00 45.45 4.70
5500 6979 3.881092 ATAGTGCGGCGCGATCTCG 62.881 63.158 28.09 8.86 43.27 4.04
5548 7027 0.811616 CCTGCCGCATGTACTCCTTC 60.812 60.000 0.00 0.00 0.00 3.46
5692 7171 4.143363 GCGGCGTTGCGGAAGTAC 62.143 66.667 9.37 0.00 0.00 2.73
5757 7236 0.248990 GAGCAGTGCTCGATCTCCAG 60.249 60.000 28.32 0.00 45.85 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.274206 AGTCACTTTTTATCTAAGGTCTGAAAC 57.726 33.333 0.00 0.00 0.00 2.78
33 34 9.930693 AAGTAGTCACTTTTTATCTAAGGTCTG 57.069 33.333 0.00 0.00 42.51 3.51
62 63 4.825085 TGAAAAGGAAGTTTATGCTTCGGT 59.175 37.500 0.00 0.00 44.17 4.69
63 64 5.371115 TGAAAAGGAAGTTTATGCTTCGG 57.629 39.130 0.00 0.00 44.17 4.30
78 79 9.950680 GTACATGTCATGGTAAATATGAAAAGG 57.049 33.333 17.08 0.00 36.41 3.11
94 95 5.273674 CTGATGGTCTCAGTACATGTCAT 57.726 43.478 0.00 0.00 45.42 3.06
113 114 6.317893 TGTCGAGCTTACTGTATATCAACTGA 59.682 38.462 0.00 0.00 0.00 3.41
134 135 3.982576 ACTTTTGTTAGCCCTTTGTCG 57.017 42.857 0.00 0.00 0.00 4.35
136 137 5.669164 TCAAACTTTTGTTAGCCCTTTGT 57.331 34.783 1.75 0.00 42.67 2.83
146 147 3.974401 CGTCGCATGATCAAACTTTTGTT 59.026 39.130 0.00 0.00 45.94 2.83
184 185 4.389374 TGTTGTTGGTTTGGCAAGAAAAA 58.611 34.783 0.00 0.00 0.00 1.94
188 189 2.676463 GCTTGTTGTTGGTTTGGCAAGA 60.676 45.455 0.00 0.00 36.41 3.02
189 190 1.665169 GCTTGTTGTTGGTTTGGCAAG 59.335 47.619 0.00 0.00 37.12 4.01
217 218 0.813184 CGTACCCGTGAAAGAGCCTA 59.187 55.000 0.00 0.00 0.00 3.93
218 219 1.590147 CGTACCCGTGAAAGAGCCT 59.410 57.895 0.00 0.00 0.00 4.58
247 248 2.403671 CTACTAGCGGGTAGTGGCGC 62.404 65.000 25.63 0.00 42.37 6.53
286 287 4.100279 AGGGTAAGAACTTGGGTTTGAG 57.900 45.455 0.00 0.00 35.58 3.02
336 337 5.749588 CCGTACGATTTTCATGTATGTGGTA 59.250 40.000 18.76 0.00 0.00 3.25
340 341 6.331845 TGTACCGTACGATTTTCATGTATGT 58.668 36.000 18.76 3.48 0.00 2.29
350 351 6.628185 AGAGATTCTTTGTACCGTACGATTT 58.372 36.000 18.76 2.86 0.00 2.17
359 360 6.260050 TGTGTGTTTGAGAGATTCTTTGTACC 59.740 38.462 0.00 0.00 0.00 3.34
360 361 7.246674 TGTGTGTTTGAGAGATTCTTTGTAC 57.753 36.000 0.00 0.00 0.00 2.90
372 373 3.242706 CGACTTTGCATGTGTGTTTGAGA 60.243 43.478 0.00 0.00 0.00 3.27
390 391 4.323417 TGCCATCTTTGATGTTTACGACT 58.677 39.130 6.78 0.00 0.00 4.18
394 395 4.114794 GGCATGCCATCTTTGATGTTTAC 58.885 43.478 32.08 0.00 35.81 2.01
421 422 4.260172 GGGAATTTGAAAAACGCAACAGTG 60.260 41.667 0.00 0.00 0.00 3.66
423 424 3.868077 TGGGAATTTGAAAAACGCAACAG 59.132 39.130 3.10 0.00 0.00 3.16
429 430 8.359060 TCTAAAACATGGGAATTTGAAAAACG 57.641 30.769 0.00 0.00 0.00 3.60
452 454 9.048446 CAAATGTGAAATTGAACCTGAATTTCT 57.952 29.630 15.36 0.00 44.70 2.52
453 455 9.044150 TCAAATGTGAAATTGAACCTGAATTTC 57.956 29.630 0.00 0.00 44.67 2.17
454 456 8.961294 TCAAATGTGAAATTGAACCTGAATTT 57.039 26.923 0.00 0.00 36.04 1.82
455 457 8.961294 TTCAAATGTGAAATTGAACCTGAATT 57.039 26.923 0.00 0.00 40.87 2.17
456 458 7.172019 GCTTCAAATGTGAAATTGAACCTGAAT 59.828 33.333 0.00 0.00 43.18 2.57
457 459 6.479660 GCTTCAAATGTGAAATTGAACCTGAA 59.520 34.615 0.00 0.00 43.18 3.02
458 460 5.984926 GCTTCAAATGTGAAATTGAACCTGA 59.015 36.000 0.00 0.00 43.18 3.86
459 461 5.987347 AGCTTCAAATGTGAAATTGAACCTG 59.013 36.000 0.00 0.00 43.18 4.00
460 462 6.165700 AGCTTCAAATGTGAAATTGAACCT 57.834 33.333 0.00 0.00 43.18 3.50
461 463 7.814107 TCATAGCTTCAAATGTGAAATTGAACC 59.186 33.333 0.00 0.00 43.18 3.62
462 464 8.746922 TCATAGCTTCAAATGTGAAATTGAAC 57.253 30.769 0.00 0.00 43.18 3.18
463 465 9.761504 TTTCATAGCTTCAAATGTGAAATTGAA 57.238 25.926 0.00 4.43 43.18 2.69
464 466 9.761504 TTTTCATAGCTTCAAATGTGAAATTGA 57.238 25.926 0.00 0.00 43.18 2.57
488 490 8.074370 GCTTCTTAGTTACTGAATTCGGTTTTT 58.926 33.333 24.43 12.52 36.70 1.94
489 491 7.444487 AGCTTCTTAGTTACTGAATTCGGTTTT 59.556 33.333 24.43 12.84 36.70 2.43
490 492 6.935208 AGCTTCTTAGTTACTGAATTCGGTTT 59.065 34.615 24.43 13.15 36.70 3.27
491 493 6.369065 CAGCTTCTTAGTTACTGAATTCGGTT 59.631 38.462 24.43 10.02 36.70 4.44
492 494 5.869888 CAGCTTCTTAGTTACTGAATTCGGT 59.130 40.000 22.98 22.98 39.18 4.69
493 495 6.100004 TCAGCTTCTTAGTTACTGAATTCGG 58.900 40.000 12.91 12.91 34.59 4.30
494 496 7.763172 ATCAGCTTCTTAGTTACTGAATTCG 57.237 36.000 0.04 0.00 40.49 3.34
495 497 9.036671 GGTATCAGCTTCTTAGTTACTGAATTC 57.963 37.037 0.00 0.00 40.49 2.17
496 498 8.763601 AGGTATCAGCTTCTTAGTTACTGAATT 58.236 33.333 0.00 0.00 40.49 2.17
497 499 8.200792 CAGGTATCAGCTTCTTAGTTACTGAAT 58.799 37.037 0.00 0.00 40.49 2.57
498 500 7.178628 ACAGGTATCAGCTTCTTAGTTACTGAA 59.821 37.037 0.00 0.00 40.49 3.02
499 501 6.663953 ACAGGTATCAGCTTCTTAGTTACTGA 59.336 38.462 0.00 0.00 41.28 3.41
500 502 6.754209 CACAGGTATCAGCTTCTTAGTTACTG 59.246 42.308 0.00 0.00 0.00 2.74
501 503 6.663953 TCACAGGTATCAGCTTCTTAGTTACT 59.336 38.462 0.00 0.00 0.00 2.24
502 504 6.864342 TCACAGGTATCAGCTTCTTAGTTAC 58.136 40.000 0.00 0.00 0.00 2.50
503 505 7.476540 TTCACAGGTATCAGCTTCTTAGTTA 57.523 36.000 0.00 0.00 0.00 2.24
504 506 6.360370 TTCACAGGTATCAGCTTCTTAGTT 57.640 37.500 0.00 0.00 0.00 2.24
505 507 6.360370 TTTCACAGGTATCAGCTTCTTAGT 57.640 37.500 0.00 0.00 0.00 2.24
506 508 7.335422 ACATTTTCACAGGTATCAGCTTCTTAG 59.665 37.037 0.00 0.00 0.00 2.18
507 509 7.119699 CACATTTTCACAGGTATCAGCTTCTTA 59.880 37.037 0.00 0.00 0.00 2.10
508 510 6.006449 ACATTTTCACAGGTATCAGCTTCTT 58.994 36.000 0.00 0.00 0.00 2.52
509 511 5.413833 CACATTTTCACAGGTATCAGCTTCT 59.586 40.000 0.00 0.00 0.00 2.85
510 512 5.412594 TCACATTTTCACAGGTATCAGCTTC 59.587 40.000 0.00 0.00 0.00 3.86
511 513 5.316167 TCACATTTTCACAGGTATCAGCTT 58.684 37.500 0.00 0.00 0.00 3.74
512 514 4.910195 TCACATTTTCACAGGTATCAGCT 58.090 39.130 0.00 0.00 0.00 4.24
513 515 5.627499 TTCACATTTTCACAGGTATCAGC 57.373 39.130 0.00 0.00 0.00 4.26
519 521 9.829507 TTCAATAATTTTCACATTTTCACAGGT 57.170 25.926 0.00 0.00 0.00 4.00
542 544 7.062839 CGAAAAACAAACTCAACATCCTTTTCA 59.937 33.333 0.00 0.00 32.44 2.69
543 545 7.062956 ACGAAAAACAAACTCAACATCCTTTTC 59.937 33.333 0.00 0.00 0.00 2.29
548 550 5.912955 CCTACGAAAAACAAACTCAACATCC 59.087 40.000 0.00 0.00 0.00 3.51
568 570 7.988028 AGCTCAGATTTATTTACTTGGACCTAC 59.012 37.037 0.00 0.00 0.00 3.18
587 589 7.995289 TGTCAAGTTTCAAATTTAAGCTCAGA 58.005 30.769 0.00 0.00 0.00 3.27
588 590 8.697067 CATGTCAAGTTTCAAATTTAAGCTCAG 58.303 33.333 0.00 0.00 0.00 3.35
589 591 7.169645 GCATGTCAAGTTTCAAATTTAAGCTCA 59.830 33.333 0.00 0.00 0.00 4.26
591 593 7.212274 AGCATGTCAAGTTTCAAATTTAAGCT 58.788 30.769 0.00 0.00 0.00 3.74
592 594 7.412137 AGCATGTCAAGTTTCAAATTTAAGC 57.588 32.000 0.00 0.00 0.00 3.09
593 595 8.819974 ACAAGCATGTCAAGTTTCAAATTTAAG 58.180 29.630 0.00 0.00 33.41 1.85
594 596 8.715191 ACAAGCATGTCAAGTTTCAAATTTAA 57.285 26.923 0.00 0.00 33.41 1.52
595 597 9.809096 TTACAAGCATGTCAAGTTTCAAATTTA 57.191 25.926 0.00 0.00 41.05 1.40
596 598 8.715191 TTACAAGCATGTCAAGTTTCAAATTT 57.285 26.923 0.00 0.00 41.05 1.82
597 599 8.767085 CATTACAAGCATGTCAAGTTTCAAATT 58.233 29.630 0.00 0.00 41.05 1.82
598 600 7.927629 ACATTACAAGCATGTCAAGTTTCAAAT 59.072 29.630 0.00 0.00 41.05 2.32
599 601 7.264221 ACATTACAAGCATGTCAAGTTTCAAA 58.736 30.769 0.00 0.00 41.05 2.69
600 602 6.804677 ACATTACAAGCATGTCAAGTTTCAA 58.195 32.000 0.00 0.00 41.05 2.69
601 603 6.389830 ACATTACAAGCATGTCAAGTTTCA 57.610 33.333 0.00 0.00 41.05 2.69
602 604 7.860373 TGTAACATTACAAGCATGTCAAGTTTC 59.140 33.333 0.00 0.00 40.43 2.78
603 605 7.647715 GTGTAACATTACAAGCATGTCAAGTTT 59.352 33.333 6.05 0.00 44.46 2.66
604 606 7.013274 AGTGTAACATTACAAGCATGTCAAGTT 59.987 33.333 6.05 0.00 44.46 2.66
605 607 6.486657 AGTGTAACATTACAAGCATGTCAAGT 59.513 34.615 6.05 0.00 44.46 3.16
606 608 6.902341 AGTGTAACATTACAAGCATGTCAAG 58.098 36.000 6.05 0.00 44.46 3.02
607 609 6.875948 AGTGTAACATTACAAGCATGTCAA 57.124 33.333 6.05 0.00 44.46 3.18
608 610 6.875948 AAGTGTAACATTACAAGCATGTCA 57.124 33.333 6.05 0.00 44.46 3.58
609 611 9.840427 AATAAAGTGTAACATTACAAGCATGTC 57.160 29.630 6.05 0.00 44.46 3.06
766 768 6.251163 CGTTCGTGTTTCGGTGTTTCTATATA 59.749 38.462 0.00 0.00 40.32 0.86
767 769 5.061311 CGTTCGTGTTTCGGTGTTTCTATAT 59.939 40.000 0.00 0.00 40.32 0.86
768 770 4.382457 CGTTCGTGTTTCGGTGTTTCTATA 59.618 41.667 0.00 0.00 40.32 1.31
788 790 3.067106 GTGTGATGAGATTGGACACGTT 58.933 45.455 0.00 0.00 34.72 3.99
831 833 2.350772 GGTTGTCAAGCTTCAATCGTGG 60.351 50.000 7.53 0.00 0.00 4.94
857 861 1.333177 AGCCTGAACAAGTCGAGTCT 58.667 50.000 0.00 0.00 0.00 3.24
1095 1921 0.106149 CTTACCCGTATGTGCCCTCC 59.894 60.000 0.00 0.00 0.00 4.30
1124 1950 0.047802 AGGGATTGGGATTGAGGGGA 59.952 55.000 0.00 0.00 0.00 4.81
1300 2128 6.963049 TTTAGGAAAATAGAGAGACGCAAC 57.037 37.500 0.00 0.00 0.00 4.17
1301 2129 7.327975 TCATTTAGGAAAATAGAGAGACGCAA 58.672 34.615 0.00 0.00 33.45 4.85
1510 2349 4.803426 GTCCTCTGGACGCAGGCG 62.803 72.222 12.71 12.71 43.14 5.52
1861 2912 5.670485 TGGTACATGACATTACATCAGGAC 58.330 41.667 0.00 0.00 32.31 3.85
1869 2920 5.416083 TGTAGCACTGGTACATGACATTAC 58.584 41.667 15.58 0.00 40.80 1.89
1992 3043 4.375005 CGAAGTCACTGTCACAACATAACG 60.375 45.833 0.00 0.00 34.13 3.18
2014 3065 9.715123 TGATACATGATTAGCATAAAAACAACG 57.285 29.630 0.00 0.00 34.82 4.10
2198 3249 2.872245 GCACTAGACAACTTGCAAGACA 59.128 45.455 32.50 9.35 32.19 3.41
2211 3262 5.468746 TCCAATTACAAACACTGCACTAGAC 59.531 40.000 0.00 0.00 0.00 2.59
2395 3446 8.934023 ATAATCTGTCCAACACCTTTAGAAAA 57.066 30.769 0.00 0.00 0.00 2.29
2657 3977 3.790091 TGCTCTAGCTTCACATCATGAC 58.210 45.455 0.00 0.00 42.66 3.06
2662 3982 5.363939 ACCTAAATGCTCTAGCTTCACATC 58.636 41.667 3.26 0.00 42.66 3.06
2673 3993 7.766738 GCTAGTTTCTCTTTACCTAAATGCTCT 59.233 37.037 0.00 0.00 0.00 4.09
2738 4064 6.328714 AGGCTTCGTAAGTAAGTAAGTAAGC 58.671 40.000 0.00 0.00 36.86 3.09
2742 4068 9.363763 GATAAAAGGCTTCGTAAGTAAGTAAGT 57.636 33.333 0.00 0.00 39.48 2.24
2743 4069 8.815189 GGATAAAAGGCTTCGTAAGTAAGTAAG 58.185 37.037 0.00 0.00 39.48 2.34
2746 4072 6.111382 GGGATAAAAGGCTTCGTAAGTAAGT 58.889 40.000 0.00 0.00 39.48 2.24
2748 4074 6.052405 TGGGATAAAAGGCTTCGTAAGTAA 57.948 37.500 0.00 0.00 39.48 2.24
2749 4075 5.680594 TGGGATAAAAGGCTTCGTAAGTA 57.319 39.130 0.00 0.00 39.48 2.24
2755 4081 4.022329 ACTTGTTTGGGATAAAAGGCTTCG 60.022 41.667 0.00 0.00 0.00 3.79
2756 4082 5.468540 ACTTGTTTGGGATAAAAGGCTTC 57.531 39.130 0.00 0.00 0.00 3.86
2757 4083 5.610398 CAACTTGTTTGGGATAAAAGGCTT 58.390 37.500 0.00 0.00 0.00 4.35
2771 4097 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
2772 4098 2.627933 TCTAGCCTACCCCAACTTGTT 58.372 47.619 0.00 0.00 0.00 2.83
2773 4099 2.337359 TCTAGCCTACCCCAACTTGT 57.663 50.000 0.00 0.00 0.00 3.16
2774 4100 4.593206 TCATATCTAGCCTACCCCAACTTG 59.407 45.833 0.00 0.00 0.00 3.16
2776 4102 4.487282 TCATATCTAGCCTACCCCAACT 57.513 45.455 0.00 0.00 0.00 3.16
2778 4104 4.349930 GGTTTCATATCTAGCCTACCCCAA 59.650 45.833 0.00 0.00 0.00 4.12
2779 4105 3.908103 GGTTTCATATCTAGCCTACCCCA 59.092 47.826 0.00 0.00 0.00 4.96
2780 4106 3.263681 GGGTTTCATATCTAGCCTACCCC 59.736 52.174 0.00 0.00 38.39 4.95
2781 4107 4.168883 AGGGTTTCATATCTAGCCTACCC 58.831 47.826 0.00 0.00 43.42 3.69
2782 4108 5.827326 AAGGGTTTCATATCTAGCCTACC 57.173 43.478 0.00 0.00 38.75 3.18
2783 4109 6.827727 TGAAAGGGTTTCATATCTAGCCTAC 58.172 40.000 0.00 0.00 44.21 3.18
2795 4121 1.766496 AGTCCTCGTGAAAGGGTTTCA 59.234 47.619 0.00 0.00 46.68 2.69
2797 4123 2.486727 GGAAGTCCTCGTGAAAGGGTTT 60.487 50.000 0.00 0.00 37.02 3.27
2798 4124 1.071857 GGAAGTCCTCGTGAAAGGGTT 59.928 52.381 0.00 0.00 37.02 4.11
2799 4125 0.685660 GGAAGTCCTCGTGAAAGGGT 59.314 55.000 0.00 0.00 37.02 4.34
2800 4126 0.036294 GGGAAGTCCTCGTGAAAGGG 60.036 60.000 0.00 0.00 37.02 3.95
2801 4127 0.685097 TGGGAAGTCCTCGTGAAAGG 59.315 55.000 0.00 0.00 37.81 3.11
2802 4128 1.338200 CCTGGGAAGTCCTCGTGAAAG 60.338 57.143 0.00 0.00 36.20 2.62
2805 4131 0.612174 CTCCTGGGAAGTCCTCGTGA 60.612 60.000 0.00 0.00 36.20 4.35
2806 4132 1.608717 CCTCCTGGGAAGTCCTCGTG 61.609 65.000 0.00 0.00 37.23 4.35
2807 4133 1.305381 CCTCCTGGGAAGTCCTCGT 60.305 63.158 0.00 0.00 37.23 4.18
2810 4136 0.545548 GTGACCTCCTGGGAAGTCCT 60.546 60.000 13.79 0.00 35.38 3.85
2811 4137 1.554583 GGTGACCTCCTGGGAAGTCC 61.555 65.000 13.79 6.97 35.38 3.85
2812 4138 1.984020 GGTGACCTCCTGGGAAGTC 59.016 63.158 10.52 10.52 36.44 3.01
2813 4139 4.234673 GGTGACCTCCTGGGAAGT 57.765 61.111 0.00 0.00 38.76 3.01
2826 4152 4.202336 CGAGAGTAGTACTAGGATGGGTGA 60.202 50.000 1.87 0.00 0.00 4.02
2827 4153 4.066490 CGAGAGTAGTACTAGGATGGGTG 58.934 52.174 1.87 0.00 0.00 4.61
2828 4154 3.496515 GCGAGAGTAGTACTAGGATGGGT 60.497 52.174 1.87 0.00 0.00 4.51
2829 4155 3.075884 GCGAGAGTAGTACTAGGATGGG 58.924 54.545 1.87 0.00 0.00 4.00
2830 4156 3.075884 GGCGAGAGTAGTACTAGGATGG 58.924 54.545 1.87 0.00 0.00 3.51
2831 4157 3.075884 GGGCGAGAGTAGTACTAGGATG 58.924 54.545 1.87 0.00 0.00 3.51
2833 4159 2.121948 TGGGCGAGAGTAGTACTAGGA 58.878 52.381 1.87 0.00 0.00 2.94
2834 4160 2.634815 TGGGCGAGAGTAGTACTAGG 57.365 55.000 1.87 0.00 0.00 3.02
2835 4161 4.261656 CCATTTGGGCGAGAGTAGTACTAG 60.262 50.000 1.87 0.00 0.00 2.57
2836 4162 3.635373 CCATTTGGGCGAGAGTAGTACTA 59.365 47.826 1.88 0.00 0.00 1.82
2837 4163 2.431057 CCATTTGGGCGAGAGTAGTACT 59.569 50.000 1.37 1.37 0.00 2.73
2838 4164 2.822764 CCATTTGGGCGAGAGTAGTAC 58.177 52.381 0.00 0.00 0.00 2.73
2859 4185 3.826729 AGCCAGTCTTTTGGGTATGAAAC 59.173 43.478 0.00 0.00 46.57 2.78
2861 4187 3.806949 AGCCAGTCTTTTGGGTATGAA 57.193 42.857 0.00 0.00 46.57 2.57
2863 4189 4.222124 ACTAGCCAGTCTTTTGGGTATG 57.778 45.455 4.61 2.96 46.74 2.39
2864 4190 4.929146 AACTAGCCAGTCTTTTGGGTAT 57.071 40.909 4.61 0.00 46.74 2.73
2865 4191 4.717279 AAACTAGCCAGTCTTTTGGGTA 57.283 40.909 4.17 4.17 46.57 3.69
2867 4193 4.937201 AAAAACTAGCCAGTCTTTTGGG 57.063 40.909 0.00 0.00 38.72 4.12
2868 4194 5.008316 ACGTAAAAACTAGCCAGTCTTTTGG 59.992 40.000 12.02 8.37 41.35 3.28
2869 4195 6.056428 ACGTAAAAACTAGCCAGTCTTTTG 57.944 37.500 12.02 0.82 32.29 2.44
2870 4196 6.459161 CCAACGTAAAAACTAGCCAGTCTTTT 60.459 38.462 0.00 0.85 32.29 2.27
2871 4197 5.008316 CCAACGTAAAAACTAGCCAGTCTTT 59.992 40.000 0.00 0.00 32.29 2.52
2875 4201 2.551032 GCCAACGTAAAAACTAGCCAGT 59.449 45.455 0.00 0.00 36.19 4.00
2876 4202 2.812011 AGCCAACGTAAAAACTAGCCAG 59.188 45.455 0.00 0.00 0.00 4.85
2878 4204 2.159747 CGAGCCAACGTAAAAACTAGCC 60.160 50.000 0.00 0.00 0.00 3.93
2880 4206 2.159747 GGCGAGCCAACGTAAAAACTAG 60.160 50.000 9.58 0.00 35.81 2.57
2883 4209 0.308376 TGGCGAGCCAACGTAAAAAC 59.692 50.000 15.24 0.00 44.12 2.43
2884 4210 2.704108 TGGCGAGCCAACGTAAAAA 58.296 47.368 15.24 0.00 44.12 1.94
2885 4211 4.458666 TGGCGAGCCAACGTAAAA 57.541 50.000 15.24 0.00 44.12 1.52
2896 4222 1.009829 GTTGTGATAGGCTTGGCGAG 58.990 55.000 0.00 0.00 0.00 5.03
2898 4224 1.376609 GGGTTGTGATAGGCTTGGCG 61.377 60.000 0.00 0.00 0.00 5.69
2899 4225 0.034089 AGGGTTGTGATAGGCTTGGC 60.034 55.000 0.00 0.00 0.00 4.52
2901 4227 4.487714 TCTAAGGGTTGTGATAGGCTTG 57.512 45.455 0.00 0.00 0.00 4.01
2903 4229 6.084738 TCATATCTAAGGGTTGTGATAGGCT 58.915 40.000 0.00 0.00 0.00 4.58
2909 4235 5.491078 AGGGTTTCATATCTAAGGGTTGTGA 59.509 40.000 0.00 0.00 0.00 3.58
2910 4236 5.755849 AGGGTTTCATATCTAAGGGTTGTG 58.244 41.667 0.00 0.00 0.00 3.33
2911 4237 6.402981 AAGGGTTTCATATCTAAGGGTTGT 57.597 37.500 0.00 0.00 0.00 3.32
2913 4239 7.039722 TGAAAGGGTTTCATATCTAAGGGTT 57.960 36.000 0.00 0.00 44.21 4.11
2914 4240 6.652205 TGAAAGGGTTTCATATCTAAGGGT 57.348 37.500 0.00 0.00 44.21 4.34
2925 4251 1.766496 AGTCCTCGTGAAAGGGTTTCA 59.234 47.619 0.00 0.00 46.68 2.69
2929 4255 0.685660 GGAAGTCCTCGTGAAAGGGT 59.314 55.000 0.00 0.00 37.02 4.34
2931 4257 0.685097 TGGGAAGTCCTCGTGAAAGG 59.315 55.000 0.00 0.00 37.81 3.11
2933 4259 0.685097 CCTGGGAAGTCCTCGTGAAA 59.315 55.000 0.00 0.00 36.20 2.69
2938 4264 1.305381 ACCTCCTGGGAAGTCCTCG 60.305 63.158 0.00 0.00 38.76 4.63
2940 4266 0.545548 GTGACCTCCTGGGAAGTCCT 60.546 60.000 13.79 0.00 35.38 3.85
2942 4268 1.984020 GGTGACCTCCTGGGAAGTC 59.016 63.158 10.52 10.52 36.44 3.01
2943 4269 4.234673 GGTGACCTCCTGGGAAGT 57.765 61.111 0.00 0.00 38.76 3.01
2955 4281 5.051409 AGAGTAGTACTAGGATGGGTGAC 57.949 47.826 1.87 0.00 0.00 3.67
2956 4282 4.202336 CGAGAGTAGTACTAGGATGGGTGA 60.202 50.000 1.87 0.00 0.00 4.02
2957 4283 4.066490 CGAGAGTAGTACTAGGATGGGTG 58.934 52.174 1.87 0.00 0.00 4.61
2958 4284 3.496515 GCGAGAGTAGTACTAGGATGGGT 60.497 52.174 1.87 0.00 0.00 4.51
2959 4285 3.075884 GCGAGAGTAGTACTAGGATGGG 58.924 54.545 1.87 0.00 0.00 4.00
2961 4287 4.633175 TGAGCGAGAGTAGTACTAGGATG 58.367 47.826 1.87 0.00 0.00 3.51
2962 4288 4.959560 TGAGCGAGAGTAGTACTAGGAT 57.040 45.455 1.87 0.00 0.00 3.24
2963 4289 4.750021 TTGAGCGAGAGTAGTACTAGGA 57.250 45.455 1.87 0.00 0.00 2.94
2964 4290 5.278071 CCAATTGAGCGAGAGTAGTACTAGG 60.278 48.000 7.12 0.00 0.00 3.02
2965 4291 5.278071 CCCAATTGAGCGAGAGTAGTACTAG 60.278 48.000 7.12 0.00 0.00 2.57
2966 4292 4.579340 CCCAATTGAGCGAGAGTAGTACTA 59.421 45.833 7.12 0.00 0.00 1.82
2968 4294 3.130693 ACCCAATTGAGCGAGAGTAGTAC 59.869 47.826 7.12 0.00 0.00 2.73
2969 4295 3.362706 ACCCAATTGAGCGAGAGTAGTA 58.637 45.455 7.12 0.00 0.00 1.82
2970 4296 2.180276 ACCCAATTGAGCGAGAGTAGT 58.820 47.619 7.12 0.00 0.00 2.73
2972 4298 3.007506 TGAAACCCAATTGAGCGAGAGTA 59.992 43.478 7.12 0.00 0.00 2.59
2973 4299 2.224523 TGAAACCCAATTGAGCGAGAGT 60.225 45.455 7.12 0.00 0.00 3.24
2974 4300 2.426522 TGAAACCCAATTGAGCGAGAG 58.573 47.619 7.12 0.00 0.00 3.20
2975 4301 2.559698 TGAAACCCAATTGAGCGAGA 57.440 45.000 7.12 0.00 0.00 4.04
2976 4302 3.065371 GGTATGAAACCCAATTGAGCGAG 59.935 47.826 7.12 0.00 43.16 5.03
2977 4303 3.013921 GGTATGAAACCCAATTGAGCGA 58.986 45.455 7.12 0.00 43.16 4.93
2978 4304 3.420839 GGTATGAAACCCAATTGAGCG 57.579 47.619 7.12 0.00 43.16 5.03
2989 4315 3.136626 AGCCAGTCCCATAGGTATGAAAC 59.863 47.826 0.00 0.00 35.75 2.78
2992 4318 2.795291 AGCCAGTCCCATAGGTATGA 57.205 50.000 0.00 0.00 35.75 2.15
2993 4319 3.511477 ACTAGCCAGTCCCATAGGTATG 58.489 50.000 0.00 0.00 0.00 2.39
2995 4321 3.700863 AACTAGCCAGTCCCATAGGTA 57.299 47.619 0.00 0.00 32.29 3.08
2997 4323 3.933861 AAAACTAGCCAGTCCCATAGG 57.066 47.619 0.00 0.00 32.29 2.57
2998 4324 4.809426 CGTAAAAACTAGCCAGTCCCATAG 59.191 45.833 0.00 0.00 32.29 2.23
2999 4325 4.223477 ACGTAAAAACTAGCCAGTCCCATA 59.777 41.667 0.00 0.00 32.29 2.74
3000 4326 3.008704 ACGTAAAAACTAGCCAGTCCCAT 59.991 43.478 0.00 0.00 32.29 4.00
3001 4327 2.369532 ACGTAAAAACTAGCCAGTCCCA 59.630 45.455 0.00 0.00 32.29 4.37
3002 4328 3.049708 ACGTAAAAACTAGCCAGTCCC 57.950 47.619 0.00 0.00 32.29 4.46
3004 4330 3.364664 GCCAACGTAAAAACTAGCCAGTC 60.365 47.826 0.00 0.00 32.29 3.51
3005 4331 2.551032 GCCAACGTAAAAACTAGCCAGT 59.449 45.455 0.00 0.00 36.19 4.00
3006 4332 2.812011 AGCCAACGTAAAAACTAGCCAG 59.188 45.455 0.00 0.00 0.00 4.85
3009 4335 2.723923 GCGAGCCAACGTAAAAACTAGC 60.724 50.000 0.00 0.00 35.59 3.42
3010 4336 2.159747 GGCGAGCCAACGTAAAAACTAG 60.160 50.000 9.58 0.00 35.81 2.57
3012 4338 0.589708 GGCGAGCCAACGTAAAAACT 59.410 50.000 9.58 0.00 35.81 2.66
3014 4340 2.704108 TGGCGAGCCAACGTAAAAA 58.296 47.368 15.24 0.00 44.12 1.94
3015 4341 4.458666 TGGCGAGCCAACGTAAAA 57.541 50.000 15.24 0.00 44.12 1.52
3028 4354 1.376609 GGGTTGTGATAGGCTTGGCG 61.377 60.000 0.00 0.00 0.00 5.69
3030 4356 1.408822 GGAGGGTTGTGATAGGCTTGG 60.409 57.143 0.00 0.00 0.00 3.61
3034 4360 0.470341 GGAGGAGGGTTGTGATAGGC 59.530 60.000 0.00 0.00 0.00 3.93
3036 4362 4.141688 GGTAAAGGAGGAGGGTTGTGATAG 60.142 50.000 0.00 0.00 0.00 2.08
3039 4365 1.982958 GGTAAAGGAGGAGGGTTGTGA 59.017 52.381 0.00 0.00 0.00 3.58
3040 4366 1.004394 GGGTAAAGGAGGAGGGTTGTG 59.996 57.143 0.00 0.00 0.00 3.33
3041 4367 1.369403 GGGTAAAGGAGGAGGGTTGT 58.631 55.000 0.00 0.00 0.00 3.32
3042 4368 0.252197 CGGGTAAAGGAGGAGGGTTG 59.748 60.000 0.00 0.00 0.00 3.77
3044 4370 1.306739 CCGGGTAAAGGAGGAGGGT 60.307 63.158 0.00 0.00 0.00 4.34
3046 4372 2.743179 GCCCGGGTAAAGGAGGAGG 61.743 68.421 24.63 0.00 0.00 4.30
3047 4373 1.272554 AAGCCCGGGTAAAGGAGGAG 61.273 60.000 24.63 0.00 0.00 3.69
3048 4374 1.229723 AAGCCCGGGTAAAGGAGGA 60.230 57.895 24.63 0.00 0.00 3.71
3050 4376 1.077716 CCAAGCCCGGGTAAAGGAG 60.078 63.158 24.63 5.31 0.00 3.69
3052 4378 2.044352 CCCAAGCCCGGGTAAAGG 60.044 66.667 24.63 18.41 41.83 3.11
3061 4387 3.489513 ATAGCCGGTCCCAAGCCC 61.490 66.667 1.90 0.00 0.00 5.19
3062 4388 2.203209 CATAGCCGGTCCCAAGCC 60.203 66.667 1.90 0.00 0.00 4.35
3063 4389 2.902343 GCATAGCCGGTCCCAAGC 60.902 66.667 1.90 0.00 0.00 4.01
3080 4406 2.588620 ACTCCGCCTATGTCTTCTAGG 58.411 52.381 0.00 0.00 39.06 3.02
3081 4407 3.243569 CCAACTCCGCCTATGTCTTCTAG 60.244 52.174 0.00 0.00 0.00 2.43
3082 4408 2.693591 CCAACTCCGCCTATGTCTTCTA 59.306 50.000 0.00 0.00 0.00 2.10
3083 4409 1.482593 CCAACTCCGCCTATGTCTTCT 59.517 52.381 0.00 0.00 0.00 2.85
3084 4410 1.480954 TCCAACTCCGCCTATGTCTTC 59.519 52.381 0.00 0.00 0.00 2.87
3085 4411 1.482593 CTCCAACTCCGCCTATGTCTT 59.517 52.381 0.00 0.00 0.00 3.01
3086 4412 1.115467 CTCCAACTCCGCCTATGTCT 58.885 55.000 0.00 0.00 0.00 3.41
3087 4413 0.824759 ACTCCAACTCCGCCTATGTC 59.175 55.000 0.00 0.00 0.00 3.06
3088 4414 1.755380 GTACTCCAACTCCGCCTATGT 59.245 52.381 0.00 0.00 0.00 2.29
3089 4415 2.032620 AGTACTCCAACTCCGCCTATG 58.967 52.381 0.00 0.00 0.00 2.23
3090 4416 2.456073 AGTACTCCAACTCCGCCTAT 57.544 50.000 0.00 0.00 0.00 2.57
3091 4417 2.507058 TCTAGTACTCCAACTCCGCCTA 59.493 50.000 0.00 0.00 0.00 3.93
3092 4418 1.284198 TCTAGTACTCCAACTCCGCCT 59.716 52.381 0.00 0.00 0.00 5.52
3093 4419 1.677052 CTCTAGTACTCCAACTCCGCC 59.323 57.143 0.00 0.00 0.00 6.13
3094 4420 2.641305 TCTCTAGTACTCCAACTCCGC 58.359 52.381 0.00 0.00 0.00 5.54
3095 4421 4.641094 ACAATCTCTAGTACTCCAACTCCG 59.359 45.833 0.00 0.00 0.00 4.63
3096 4422 5.680151 GCACAATCTCTAGTACTCCAACTCC 60.680 48.000 0.00 0.00 0.00 3.85
3097 4423 5.105716 TGCACAATCTCTAGTACTCCAACTC 60.106 44.000 0.00 0.00 0.00 3.01
3098 4424 4.772624 TGCACAATCTCTAGTACTCCAACT 59.227 41.667 0.00 0.00 0.00 3.16
3099 4425 5.073311 TGCACAATCTCTAGTACTCCAAC 57.927 43.478 0.00 0.00 0.00 3.77
3100 4426 5.738619 TTGCACAATCTCTAGTACTCCAA 57.261 39.130 0.00 0.00 0.00 3.53
3101 4427 5.187772 ACATTGCACAATCTCTAGTACTCCA 59.812 40.000 0.00 0.00 0.00 3.86
3139 4465 5.793817 CCGTCAGATGGATATGGATAAACA 58.206 41.667 1.83 0.00 0.00 2.83
3140 4466 4.631813 GCCGTCAGATGGATATGGATAAAC 59.368 45.833 13.47 0.00 0.00 2.01
3141 4467 4.285775 TGCCGTCAGATGGATATGGATAAA 59.714 41.667 13.47 0.00 0.00 1.40
3142 4468 3.837731 TGCCGTCAGATGGATATGGATAA 59.162 43.478 13.47 0.00 0.00 1.75
3143 4469 3.440127 TGCCGTCAGATGGATATGGATA 58.560 45.455 13.47 0.00 0.00 2.59
3144 4470 2.259917 TGCCGTCAGATGGATATGGAT 58.740 47.619 13.47 0.00 0.00 3.41
3145 4471 1.715785 TGCCGTCAGATGGATATGGA 58.284 50.000 13.47 0.00 0.00 3.41
3146 4472 2.146342 GTTGCCGTCAGATGGATATGG 58.854 52.381 13.47 0.00 0.00 2.74
3147 4473 2.545526 GTGTTGCCGTCAGATGGATATG 59.454 50.000 13.47 0.00 0.00 1.78
3153 4479 0.729116 GGATGTGTTGCCGTCAGATG 59.271 55.000 0.00 0.00 0.00 2.90
3183 4509 5.075493 TGGAAGATATTCCCCGAGTAGTAC 58.925 45.833 16.39 0.00 40.39 2.73
3203 4529 6.560003 ATCCAACAGTGTACAATATCTGGA 57.440 37.500 17.40 17.40 35.06 3.86
3246 4572 7.039011 TCACATGGCTAGATATTACCCAAGTAG 60.039 40.741 0.00 0.00 0.00 2.57
3252 4578 4.938226 GCTTCACATGGCTAGATATTACCC 59.062 45.833 0.00 0.00 0.00 3.69
3310 4636 9.032624 ACATAACAGGAGTACAAACATAGTAGT 57.967 33.333 0.00 0.00 0.00 2.73
3338 4667 4.911610 CCGAACTAACAAGAGCAACATTTG 59.088 41.667 0.00 0.00 0.00 2.32
3404 4734 8.724229 CCCTACTGTAACCAAGTTTAAATGTAC 58.276 37.037 0.00 0.00 0.00 2.90
3454 4784 8.052748 TGCACTTCTATTTTCACATAATAGGGT 58.947 33.333 0.00 0.00 36.61 4.34
3459 4789 7.701539 TGGTGCACTTCTATTTTCACATAAT 57.298 32.000 17.98 0.00 0.00 1.28
3471 4801 4.910195 ACAATGAGATTGGTGCACTTCTA 58.090 39.130 17.98 0.00 44.42 2.10
3525 4855 5.532557 AGTTTATGTTTCTCTTGGCAAAGC 58.467 37.500 0.00 0.00 33.06 3.51
3542 4872 4.405036 GGAGGACGGAGGAGTTAAGTTTAT 59.595 45.833 0.00 0.00 0.00 1.40
3544 4874 2.566279 GGAGGACGGAGGAGTTAAGTTT 59.434 50.000 0.00 0.00 0.00 2.66
3595 4925 0.041312 CCACGAAAAGAACCACGCAG 60.041 55.000 0.00 0.00 0.00 5.18
3617 4947 9.262358 CTAGACAGGGAGCAACTATATTTTTAC 57.738 37.037 0.00 0.00 0.00 2.01
3866 5197 6.208797 GGGGAGGCTTCAAATTATTATACCAC 59.791 42.308 0.00 0.00 0.00 4.16
3951 5282 9.552114 CAAGCTTCAAGTACAAAATGATAAGAG 57.448 33.333 0.00 0.00 0.00 2.85
3953 5284 8.025445 AGCAAGCTTCAAGTACAAAATGATAAG 58.975 33.333 0.00 0.00 0.00 1.73
3954 5285 7.885297 AGCAAGCTTCAAGTACAAAATGATAA 58.115 30.769 0.00 0.00 0.00 1.75
3956 5287 6.016024 TGAGCAAGCTTCAAGTACAAAATGAT 60.016 34.615 0.00 0.00 0.00 2.45
3957 5288 5.299028 TGAGCAAGCTTCAAGTACAAAATGA 59.701 36.000 0.00 0.00 0.00 2.57
3958 5289 5.522456 TGAGCAAGCTTCAAGTACAAAATG 58.478 37.500 0.00 0.00 0.00 2.32
3959 5290 5.300286 ACTGAGCAAGCTTCAAGTACAAAAT 59.700 36.000 0.00 0.00 0.00 1.82
4017 5356 6.691508 AGCATGAAAATCAAAACTAGAACCC 58.308 36.000 0.00 0.00 0.00 4.11
4102 5441 9.965824 AAGCATATATAAATGTAAGCAAACACC 57.034 29.630 0.00 0.00 30.75 4.16
4121 5460 9.439500 ACAAACTTTTTGCATATCAAAGCATAT 57.561 25.926 0.00 0.00 44.62 1.78
4326 5665 0.951040 CAAGCCACGAGTCAGGGAAC 60.951 60.000 1.33 0.00 0.00 3.62
4405 5744 5.727515 GCATCAGCAAACACAAAAGGAAAAC 60.728 40.000 0.00 0.00 41.58 2.43
4468 5807 3.611517 CTGCTGTTGACGTCTTTTCTTG 58.388 45.455 17.92 2.02 0.00 3.02
4535 5874 2.068821 GGGCATGAGGAGGCTGAGA 61.069 63.158 0.00 0.00 0.00 3.27
5014 6356 1.602311 CTACATGCCATGGCCTTCTC 58.398 55.000 33.44 6.02 41.09 2.87
5096 6450 7.003482 TGACATTAATTATATCAAGCCCAGCA 58.997 34.615 0.00 0.00 0.00 4.41
5126 6483 9.232882 ACTTCCCAAGTATAATTAACCCATAGA 57.767 33.333 0.00 0.00 40.69 1.98
5141 6498 7.120716 AGGACAAAACTAAAACTTCCCAAGTA 58.879 34.615 0.00 0.00 41.91 2.24
5142 6499 5.955959 AGGACAAAACTAAAACTTCCCAAGT 59.044 36.000 0.00 0.00 45.46 3.16
5200 6561 7.537306 GGTGTACTGTATGTTGCTGTATTTTTG 59.463 37.037 0.00 0.00 0.00 2.44
5364 6843 7.413446 TCAACCTAGAAATCCTGGAATTCAAT 58.587 34.615 22.87 8.87 0.00 2.57
5410 6889 4.803426 GGTCCAGCGACGAGGCAG 62.803 72.222 0.00 0.00 40.17 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.