Multiple sequence alignment - TraesCS1D01G242600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G242600 chr1D 100.000 7022 0 0 1 7022 332951795 332958816 0.000000e+00 12968.0
1 TraesCS1D01G242600 chr1D 77.229 628 65 38 6470 7022 402364670 402365294 5.330000e-76 296.0
2 TraesCS1D01G242600 chr1D 78.346 508 66 22 6557 7022 345408454 345408959 8.910000e-74 289.0
3 TraesCS1D01G242600 chr1D 85.944 249 33 2 6775 7022 430999783 430999536 1.500000e-66 265.0
4 TraesCS1D01G242600 chr1D 91.150 113 8 2 4638 4749 490538212 490538101 1.220000e-32 152.0
5 TraesCS1D01G242600 chr1D 94.872 39 2 0 2280 2318 97543602 97543640 2.110000e-05 62.1
6 TraesCS1D01G242600 chr1B 94.092 1608 70 15 4784 6377 448299012 448300608 0.000000e+00 2420.0
7 TraesCS1D01G242600 chr1B 91.048 1698 84 27 2515 4158 448296488 448298171 0.000000e+00 2231.0
8 TraesCS1D01G242600 chr1B 89.947 1701 57 30 664 2302 448293484 448295132 0.000000e+00 2089.0
9 TraesCS1D01G242600 chr1B 90.630 683 44 10 2320 3000 448295215 448295879 0.000000e+00 889.0
10 TraesCS1D01G242600 chr1B 90.852 481 37 3 4155 4633 448298197 448298672 7.680000e-179 638.0
11 TraesCS1D01G242600 chr1B 88.889 432 24 13 2039 2458 448295937 448296356 1.750000e-140 510.0
12 TraesCS1D01G242600 chr1B 89.274 317 25 5 219 529 448293115 448293428 8.540000e-104 388.0
13 TraesCS1D01G242600 chr1B 90.566 212 16 3 1 208 448270637 448270848 1.930000e-70 278.0
14 TraesCS1D01G242600 chr1B 82.258 310 29 19 6472 6759 510795596 510795291 1.960000e-60 244.0
15 TraesCS1D01G242600 chr1B 93.458 107 7 0 4627 4733 631231445 631231551 7.290000e-35 159.0
16 TraesCS1D01G242600 chr1B 96.721 61 2 0 3255 3315 15280765 15280825 1.250000e-17 102.0
17 TraesCS1D01G242600 chr1B 98.077 52 1 0 2468 2519 448296346 448296397 2.700000e-14 91.6
18 TraesCS1D01G242600 chr1B 95.652 46 2 0 6471 6516 664311239 664311284 2.720000e-09 75.0
19 TraesCS1D01G242600 chr1B 89.286 56 5 1 6473 6527 649310831 649310886 1.260000e-07 69.4
20 TraesCS1D01G242600 chr1B 95.000 40 1 1 2281 2320 646912500 646912538 2.110000e-05 62.1
21 TraesCS1D01G242600 chr1A 95.876 1261 41 9 5120 6377 430610313 430611565 0.000000e+00 2030.0
22 TraesCS1D01G242600 chr1A 90.285 1441 40 29 575 1961 430605108 430606502 0.000000e+00 1794.0
23 TraesCS1D01G242600 chr1A 91.590 868 41 8 3314 4158 430608435 430609293 0.000000e+00 1170.0
24 TraesCS1D01G242600 chr1A 95.008 621 24 5 2639 3257 430607821 430608436 0.000000e+00 968.0
25 TraesCS1D01G242600 chr1A 93.182 484 28 4 4155 4634 430609319 430609801 0.000000e+00 706.0
26 TraesCS1D01G242600 chr1A 89.157 581 37 11 1928 2484 430606495 430607073 0.000000e+00 701.0
27 TraesCS1D01G242600 chr1A 90.495 505 31 9 1 495 430604623 430605120 0.000000e+00 651.0
28 TraesCS1D01G242600 chr1A 93.909 394 17 2 4731 5123 430609801 430610188 7.850000e-164 588.0
29 TraesCS1D01G242600 chr1A 79.401 267 31 14 6778 7022 95395140 95395404 4.360000e-37 167.0
30 TraesCS1D01G242600 chr1A 98.485 66 1 0 5149 5214 554461313 554461248 4.450000e-22 117.0
31 TraesCS1D01G242600 chr1A 98.485 66 1 0 5149 5214 554461860 554461795 4.450000e-22 117.0
32 TraesCS1D01G242600 chr1A 95.000 60 3 0 3256 3315 547324321 547324262 2.090000e-15 95.3
33 TraesCS1D01G242600 chr3B 78.165 545 60 26 6536 7022 512796047 512795504 6.890000e-75 292.0
34 TraesCS1D01G242600 chr3B 80.192 313 51 11 1246 1554 793078844 793078539 2.550000e-54 224.0
35 TraesCS1D01G242600 chr3B 82.510 263 30 11 6474 6722 275337109 275336849 4.270000e-52 217.0
36 TraesCS1D01G242600 chr3B 93.548 62 2 2 3266 3325 815457892 815457953 2.700000e-14 91.6
37 TraesCS1D01G242600 chr7D 87.755 245 30 0 6778 7022 500816869 500816625 3.210000e-73 287.0
38 TraesCS1D01G242600 chr7D 93.458 107 5 2 4638 4744 51550638 51550742 2.620000e-34 158.0
39 TraesCS1D01G242600 chr7D 94.681 94 4 1 6533 6626 548622322 548622230 2.040000e-30 145.0
40 TraesCS1D01G242600 chr7D 84.043 94 13 2 6524 6616 502231051 502230959 9.700000e-14 89.8
41 TraesCS1D01G242600 chr7D 92.308 39 3 0 2280 2318 195654031 195654069 1.000000e-03 56.5
42 TraesCS1D01G242600 chr5B 87.755 245 30 0 6778 7022 82466948 82467192 3.210000e-73 287.0
43 TraesCS1D01G242600 chr2D 87.347 245 30 1 6778 7022 420744976 420744733 5.360000e-71 279.0
44 TraesCS1D01G242600 chr2D 86.111 180 21 3 6527 6703 106877286 106877464 2.590000e-44 191.0
45 TraesCS1D01G242600 chr2D 89.655 58 6 0 6472 6529 548603230 548603287 2.720000e-09 75.0
46 TraesCS1D01G242600 chr6D 86.056 251 29 4 6778 7022 457669801 457669551 1.500000e-66 265.0
47 TraesCS1D01G242600 chr6D 81.467 259 29 10 6473 6715 62620292 62620547 2.000000e-45 195.0
48 TraesCS1D01G242600 chr5D 86.307 241 31 2 6780 7019 373953863 373954102 1.940000e-65 261.0
49 TraesCS1D01G242600 chr5D 85.714 245 35 0 6778 7022 54096078 54095834 6.990000e-65 259.0
50 TraesCS1D01G242600 chr5D 79.430 316 55 9 1246 1559 378885976 378886283 1.530000e-51 215.0
51 TraesCS1D01G242600 chr5D 95.652 46 2 0 6474 6519 336378096 336378051 2.720000e-09 75.0
52 TraesCS1D01G242600 chr2A 85.772 246 33 2 6778 7022 765870570 765870814 6.990000e-65 259.0
53 TraesCS1D01G242600 chr2A 83.058 242 28 9 6476 6715 138526137 138526367 2.570000e-49 207.0
54 TraesCS1D01G242600 chr2A 88.372 172 18 2 6545 6715 138517333 138517503 9.230000e-49 206.0
55 TraesCS1D01G242600 chr2A 74.498 498 61 30 6473 6913 213411866 213411378 9.430000e-34 156.0
56 TraesCS1D01G242600 chr2A 95.312 64 3 0 3256 3319 778925490 778925427 1.250000e-17 102.0
57 TraesCS1D01G242600 chr2A 98.148 54 1 0 3266 3319 499175675 499175728 2.090000e-15 95.3
58 TraesCS1D01G242600 chr2A 94.915 59 1 2 3266 3324 427516545 427516601 2.700000e-14 91.6
59 TraesCS1D01G242600 chr2A 93.548 62 3 1 3256 3316 504548086 504548025 2.700000e-14 91.6
60 TraesCS1D01G242600 chr2A 94.444 54 3 0 6474 6527 738917048 738917101 4.510000e-12 84.2
61 TraesCS1D01G242600 chr3A 80.878 319 51 9 1246 1559 721650649 721650336 7.040000e-60 243.0
62 TraesCS1D01G242600 chr3A 95.349 43 2 0 6474 6516 616368610 616368652 1.260000e-07 69.4
63 TraesCS1D01G242600 chr3A 92.857 42 0 3 2280 2320 658327981 658327942 2.740000e-04 58.4
64 TraesCS1D01G242600 chr7A 76.400 500 66 31 6544 6998 545040664 545041156 9.170000e-54 222.0
65 TraesCS1D01G242600 chr7A 80.632 253 47 2 1311 1562 709692122 709691871 2.000000e-45 195.0
66 TraesCS1D01G242600 chr7A 80.392 255 44 6 1311 1562 186412415 186412164 9.300000e-44 189.0
67 TraesCS1D01G242600 chr7A 93.805 113 7 0 4628 4740 39313358 39313470 3.370000e-38 171.0
68 TraesCS1D01G242600 chr6A 83.607 244 26 7 6471 6706 604592936 604592699 4.270000e-52 217.0
69 TraesCS1D01G242600 chr6B 79.310 319 57 9 1246 1562 139453033 139452722 1.530000e-51 215.0
70 TraesCS1D01G242600 chr6B 94.286 105 6 0 4638 4742 424084092 424084196 2.030000e-35 161.0
71 TraesCS1D01G242600 chr6B 94.286 105 6 0 4638 4742 424306790 424306894 2.030000e-35 161.0
72 TraesCS1D01G242600 chr6B 93.878 49 3 0 6468 6516 640316641 640316689 2.720000e-09 75.0
73 TraesCS1D01G242600 chr3D 81.609 261 41 7 1297 1554 591378210 591378466 7.140000e-50 209.0
74 TraesCS1D01G242600 chr3D 82.377 244 31 6 6791 7022 407749935 407749692 1.190000e-47 202.0
75 TraesCS1D01G242600 chr3D 80.000 265 23 18 6476 6715 317058156 317057897 1.210000e-37 169.0
76 TraesCS1D01G242600 chr3D 89.313 131 14 0 6787 6917 462806961 462807091 1.570000e-36 165.0
77 TraesCS1D01G242600 chr3D 93.458 107 6 1 4632 4738 71512806 71512911 2.620000e-34 158.0
78 TraesCS1D01G242600 chr3D 98.485 66 1 0 5149 5214 602879533 602879598 4.450000e-22 117.0
79 TraesCS1D01G242600 chr3D 98.485 66 1 0 5149 5214 604112394 604112329 4.450000e-22 117.0
80 TraesCS1D01G242600 chr3D 95.000 60 3 0 3256 3315 49639449 49639390 2.090000e-15 95.3
81 TraesCS1D01G242600 chr2B 86.082 194 21 6 6525 6715 379146259 379146449 3.320000e-48 204.0
82 TraesCS1D01G242600 chr2B 92.661 109 8 0 4625 4733 601206956 601206848 2.620000e-34 158.0
83 TraesCS1D01G242600 chr2B 88.281 128 10 5 4621 4747 743697964 743698087 1.580000e-31 148.0
84 TraesCS1D01G242600 chr4A 83.645 214 23 3 6708 6911 59373185 59373396 2.590000e-44 191.0
85 TraesCS1D01G242600 chr4A 95.161 62 2 1 3255 3315 743919047 743919108 5.800000e-16 97.1
86 TraesCS1D01G242600 chr5A 74.109 533 58 43 6564 7022 227113766 227113240 5.680000e-31 147.0
87 TraesCS1D01G242600 chr5A 75.336 223 27 16 6559 6758 53241258 53241475 1.620000e-11 82.4
88 TraesCS1D01G242600 chr5A 100.000 28 0 0 2289 2316 69195498 69195471 1.300000e-02 52.8
89 TraesCS1D01G242600 chr5A 96.774 31 1 0 2288 2318 650146968 650146938 1.300000e-02 52.8
90 TraesCS1D01G242600 chrUn 98.485 66 1 0 5149 5214 396064274 396064209 4.450000e-22 117.0
91 TraesCS1D01G242600 chr4D 98.485 66 1 0 5149 5214 123539403 123539338 4.450000e-22 117.0
92 TraesCS1D01G242600 chr4B 98.485 66 1 0 5149 5214 308680941 308681006 4.450000e-22 117.0
93 TraesCS1D01G242600 chr4B 100.000 42 0 0 6478 6519 57805655 57805614 2.100000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G242600 chr1D 332951795 332958816 7021 False 12968.000 12968 100.000000 1 7022 1 chr1D.!!$F2 7021
1 TraesCS1D01G242600 chr1D 402364670 402365294 624 False 296.000 296 77.229000 6470 7022 1 chr1D.!!$F4 552
2 TraesCS1D01G242600 chr1D 345408454 345408959 505 False 289.000 289 78.346000 6557 7022 1 chr1D.!!$F3 465
3 TraesCS1D01G242600 chr1B 448293115 448300608 7493 False 1157.075 2420 91.601125 219 6377 8 chr1B.!!$F7 6158
4 TraesCS1D01G242600 chr1A 430604623 430611565 6942 False 1076.000 2030 92.437750 1 6377 8 chr1A.!!$F2 6376
5 TraesCS1D01G242600 chr3B 512795504 512796047 543 True 292.000 292 78.165000 6536 7022 1 chr3B.!!$R2 486

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
917 934 0.319900 CACCAACCACACTCCTCTCG 60.320 60.000 0.00 0.0 0.00 4.04 F
918 935 0.759436 ACCAACCACACTCCTCTCGT 60.759 55.000 0.00 0.0 0.00 4.18 F
2407 2607 0.320771 AGCTTAGCACAGGAACCACG 60.321 55.000 7.07 0.0 0.00 4.94 F
3237 4839 1.128692 GACTTCGCCTTCAATTCCGTG 59.871 52.381 0.00 0.0 0.00 4.94 F
4240 5922 0.829182 AGGTTGCTTTGGCTGGAAGG 60.829 55.000 0.00 0.0 39.59 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1831 1904 0.235926 GCAGAGAAATATTCCCGCGC 59.764 55.0 0.0 0.0 0.0 6.86 R
2854 4454 0.537143 AGCAAATGTTCTCCACGCCA 60.537 50.0 0.0 0.0 0.0 5.69 R
3298 4900 0.033796 ACATACTCCCTCCGTTCCGA 60.034 55.0 0.0 0.0 0.0 4.55 R
4717 6402 0.337082 TATGACTCCCTCCGTCCCAA 59.663 55.0 0.0 0.0 0.0 4.12 R
6080 8195 0.900421 AGGAAGCACGGTAAGGGTAC 59.100 55.0 0.0 0.0 0.0 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 4.012895 GCAACCGGTGCGTGACTG 62.013 66.667 8.52 0.75 45.10 3.51
75 77 2.172505 TGGCCATCGTGAATCATTAGGT 59.827 45.455 0.00 0.00 0.00 3.08
107 109 9.300681 GAATTCATTGGGATAAATCACTCCATA 57.699 33.333 0.00 0.00 32.90 2.74
108 110 8.874744 ATTCATTGGGATAAATCACTCCATAG 57.125 34.615 0.00 0.00 32.90 2.23
109 111 6.240894 TCATTGGGATAAATCACTCCATAGC 58.759 40.000 0.00 0.00 32.90 2.97
110 112 5.645056 TTGGGATAAATCACTCCATAGCA 57.355 39.130 0.00 0.00 32.90 3.49
111 113 4.973168 TGGGATAAATCACTCCATAGCAC 58.027 43.478 0.00 0.00 32.90 4.40
112 114 4.411869 TGGGATAAATCACTCCATAGCACA 59.588 41.667 0.00 0.00 32.90 4.57
114 116 6.006449 GGGATAAATCACTCCATAGCACAAT 58.994 40.000 0.00 0.00 32.90 2.71
115 117 6.150140 GGGATAAATCACTCCATAGCACAATC 59.850 42.308 0.00 0.00 32.90 2.67
116 118 6.712095 GGATAAATCACTCCATAGCACAATCA 59.288 38.462 0.00 0.00 0.00 2.57
117 119 7.392673 GGATAAATCACTCCATAGCACAATCAT 59.607 37.037 0.00 0.00 0.00 2.45
118 120 9.440773 GATAAATCACTCCATAGCACAATCATA 57.559 33.333 0.00 0.00 0.00 2.15
133 135 9.961265 AGCACAATCATAAACTCATATGAATTG 57.039 29.630 16.88 16.88 43.49 2.32
242 248 5.008613 AGAGAAGATCTGCTGACGTTCTATC 59.991 44.000 8.36 8.51 36.69 2.08
256 262 9.307121 CTGACGTTCTATCAAGATCTTTTGTAT 57.693 33.333 4.86 0.29 0.00 2.29
407 414 4.573201 TGCAGCGGGAATACAACTATTTAC 59.427 41.667 0.00 0.00 0.00 2.01
408 415 4.814771 GCAGCGGGAATACAACTATTTACT 59.185 41.667 0.00 0.00 0.00 2.24
409 416 5.987347 GCAGCGGGAATACAACTATTTACTA 59.013 40.000 0.00 0.00 0.00 1.82
435 445 4.735985 TGCAATCACTGTGATTTACATGC 58.264 39.130 28.39 27.07 44.03 4.06
486 496 9.221775 CACCGAAAATATATTTTAGCTGTCAAC 57.778 33.333 20.69 6.85 39.86 3.18
643 657 9.339492 GCATATGGAACTTTACGTATCTACTAC 57.661 37.037 4.56 0.00 0.00 2.73
647 661 7.253422 TGGAACTTTACGTATCTACTACTTGC 58.747 38.462 0.00 0.00 0.00 4.01
649 663 7.756722 GGAACTTTACGTATCTACTACTTGCAA 59.243 37.037 0.00 0.00 0.00 4.08
650 664 9.132521 GAACTTTACGTATCTACTACTTGCAAA 57.867 33.333 0.00 0.00 0.00 3.68
651 665 8.458212 ACTTTACGTATCTACTACTTGCAAAC 57.542 34.615 0.00 0.00 0.00 2.93
652 666 8.302438 ACTTTACGTATCTACTACTTGCAAACT 58.698 33.333 0.00 0.00 0.00 2.66
653 667 9.136952 CTTTACGTATCTACTACTTGCAAACTT 57.863 33.333 0.00 0.00 0.00 2.66
654 668 6.946229 ACGTATCTACTACTTGCAAACTTG 57.054 37.500 0.00 0.00 0.00 3.16
655 669 6.684686 ACGTATCTACTACTTGCAAACTTGA 58.315 36.000 0.00 0.00 0.00 3.02
656 670 7.149973 ACGTATCTACTACTTGCAAACTTGAA 58.850 34.615 0.00 0.00 0.00 2.69
657 671 7.654520 ACGTATCTACTACTTGCAAACTTGAAA 59.345 33.333 0.00 0.00 0.00 2.69
658 672 8.656849 CGTATCTACTACTTGCAAACTTGAAAT 58.343 33.333 0.00 0.00 0.00 2.17
661 675 8.677148 TCTACTACTTGCAAACTTGAAATTCT 57.323 30.769 0.00 0.00 0.00 2.40
662 676 9.120538 TCTACTACTTGCAAACTTGAAATTCTT 57.879 29.630 0.00 0.00 0.00 2.52
815 832 2.093288 TCATAGACTCGTCGTAGGTGGT 60.093 50.000 0.00 0.00 34.09 4.16
822 839 3.002791 CTCGTCGTAGGTGGTACAGTTA 58.997 50.000 0.00 0.00 41.80 2.24
892 909 4.394712 CGCGGGCTTCCACTCCTT 62.395 66.667 0.00 0.00 0.00 3.36
893 910 2.436824 GCGGGCTTCCACTCCTTC 60.437 66.667 0.00 0.00 0.00 3.46
894 911 3.068881 CGGGCTTCCACTCCTTCA 58.931 61.111 0.00 0.00 0.00 3.02
895 912 1.376037 CGGGCTTCCACTCCTTCAC 60.376 63.158 0.00 0.00 0.00 3.18
896 913 1.002011 GGGCTTCCACTCCTTCACC 60.002 63.158 0.00 0.00 0.00 4.02
917 934 0.319900 CACCAACCACACTCCTCTCG 60.320 60.000 0.00 0.00 0.00 4.04
918 935 0.759436 ACCAACCACACTCCTCTCGT 60.759 55.000 0.00 0.00 0.00 4.18
1271 1316 1.221293 GAGGAGACGAGGACGAGGA 59.779 63.158 0.00 0.00 42.66 3.71
1272 1317 1.078285 AGGAGACGAGGACGAGGAC 60.078 63.158 0.00 0.00 42.66 3.85
1273 1318 2.462782 GGAGACGAGGACGAGGACG 61.463 68.421 0.00 0.00 42.66 4.79
1274 1319 1.447489 GAGACGAGGACGAGGACGA 60.447 63.158 0.00 0.00 42.66 4.20
1275 1320 1.422950 GAGACGAGGACGAGGACGAG 61.423 65.000 0.00 0.00 42.66 4.18
1276 1321 2.436292 ACGAGGACGAGGACGAGG 60.436 66.667 0.00 0.00 42.66 4.63
1277 1322 3.203412 CGAGGACGAGGACGAGGG 61.203 72.222 0.00 0.00 42.66 4.30
1278 1323 3.519930 GAGGACGAGGACGAGGGC 61.520 72.222 0.00 0.00 42.66 5.19
1281 1326 3.878519 GACGAGGACGAGGGCGAG 61.879 72.222 0.00 0.00 42.66 5.03
1580 1628 2.039216 TGAAAATGAAGCCCACTCCGTA 59.961 45.455 0.00 0.00 0.00 4.02
1589 1637 2.105993 AGCCCACTCCGTATATTTTCCC 59.894 50.000 0.00 0.00 0.00 3.97
1590 1638 2.158726 GCCCACTCCGTATATTTTCCCA 60.159 50.000 0.00 0.00 0.00 4.37
1591 1639 3.473625 CCCACTCCGTATATTTTCCCAC 58.526 50.000 0.00 0.00 0.00 4.61
1592 1640 3.118186 CCCACTCCGTATATTTTCCCACA 60.118 47.826 0.00 0.00 0.00 4.17
1593 1641 3.875134 CCACTCCGTATATTTTCCCACAC 59.125 47.826 0.00 0.00 0.00 3.82
1605 1653 1.195115 TCCCACACAGTAGCATCTCC 58.805 55.000 0.00 0.00 0.00 3.71
1697 1769 1.003118 GGCCCAACTCTGATGTGTGTA 59.997 52.381 0.00 0.00 0.00 2.90
1711 1783 6.549061 TGATGTGTGTAGTAGATTGTCGTAC 58.451 40.000 0.00 0.00 0.00 3.67
1829 1902 1.032114 GCCTTCGGTGAGAAATGGGG 61.032 60.000 0.00 0.00 38.57 4.96
1830 1903 1.032114 CCTTCGGTGAGAAATGGGGC 61.032 60.000 0.00 0.00 38.57 5.80
1831 1904 1.369091 CTTCGGTGAGAAATGGGGCG 61.369 60.000 0.00 0.00 38.57 6.13
1832 1905 3.508840 CGGTGAGAAATGGGGCGC 61.509 66.667 0.00 0.00 0.00 6.53
1926 2006 5.925509 TGGACAGTCTACTAAGTGCTTTTT 58.074 37.500 0.00 0.00 0.00 1.94
2014 2127 3.248495 AGCCTTTCTACGGTCTAAAGC 57.752 47.619 8.76 5.91 0.00 3.51
2037 2150 2.034124 ACTCTGTTGCTGGCAAACAAT 58.966 42.857 9.67 0.00 37.70 2.71
2059 2192 3.533606 TGCCTTTCTCTGAGTAGCATC 57.466 47.619 4.32 0.00 0.00 3.91
2078 2211 1.003003 TCATTCGGTCACATCAGCCAA 59.997 47.619 0.00 0.00 0.00 4.52
2186 2319 2.954316 TGATTCAGCACAACGTACGAT 58.046 42.857 24.41 7.40 0.00 3.73
2221 2354 1.644509 TTCTCTCTTGCTGGCCTACA 58.355 50.000 3.32 0.00 0.00 2.74
2287 2422 4.550669 ACATGATGATAGACACTCCCTCA 58.449 43.478 0.00 0.00 0.00 3.86
2333 2533 4.712337 AGGTCACTTAGGGAGTACATCTTG 59.288 45.833 0.00 0.00 36.65 3.02
2345 2545 6.464465 GGGAGTACATCTTGTGGCAATACTAT 60.464 42.308 0.00 0.00 0.00 2.12
2383 2583 4.669318 TCTTTAGTAGTGCTATCGTGTGC 58.331 43.478 0.00 0.00 0.00 4.57
2407 2607 0.320771 AGCTTAGCACAGGAACCACG 60.321 55.000 7.07 0.00 0.00 4.94
2408 2608 1.298859 GCTTAGCACAGGAACCACGG 61.299 60.000 0.00 0.00 0.00 4.94
2414 2614 1.541670 GCACAGGAACCACGGAACTTA 60.542 52.381 0.00 0.00 0.00 2.24
2441 2641 4.201841 GGTAGCACTAGAACTTCTCTCGTC 60.202 50.000 0.00 0.00 35.41 4.20
2450 2650 5.177326 AGAACTTCTCTCGTCGTGTATACT 58.823 41.667 4.17 0.00 0.00 2.12
2514 3032 6.791303 TGCAGTAGTTTTTCCAGTAAAACAG 58.209 36.000 13.02 3.97 45.81 3.16
2553 3071 3.194005 TCAGTTGACTCTTTGTGGACC 57.806 47.619 0.00 0.00 0.00 4.46
2576 3094 5.474876 CCTATCCTTCAAATACAATCCCAGC 59.525 44.000 0.00 0.00 0.00 4.85
2602 3120 2.268298 CCGAATGGAAACTCTGTACCG 58.732 52.381 0.00 0.00 37.49 4.02
2628 3146 5.012148 AGGAATATGTACTCCTTCCAATCCG 59.988 44.000 17.45 0.00 39.08 4.18
2651 3169 6.149633 CGCAGTAAGTCCTTTTAGCATTTTT 58.850 36.000 0.00 0.00 0.00 1.94
2678 4278 7.136822 AGTTGAATATATACTCCCACTGCAA 57.863 36.000 0.00 0.00 0.00 4.08
2712 4312 6.650120 TGTTGTTCCTATTTAGTCCCTCATC 58.350 40.000 0.00 0.00 0.00 2.92
2715 4315 7.265599 TGTTCCTATTTAGTCCCTCATCAAA 57.734 36.000 0.00 0.00 0.00 2.69
2768 4368 4.156008 CGGGAGGGAAAACAGAAAGTTATG 59.844 45.833 0.00 0.00 40.26 1.90
2854 4454 5.456763 GGATTGGAGGGAGTAGTTAATGCAT 60.457 44.000 0.00 0.00 0.00 3.96
2929 4529 5.009510 TGCAATGCAACACAGTGTATACTTT 59.990 36.000 5.01 1.73 46.06 2.66
3000 4601 5.578727 GCCTGAAACCTATTCTATATCTGCG 59.421 44.000 0.00 0.00 0.00 5.18
3017 4618 3.253188 TCTGCGCTTGCTTTTATTTGAGT 59.747 39.130 9.73 0.00 40.12 3.41
3181 4783 1.832883 TTGCCGATGTGGTATGCTTT 58.167 45.000 0.00 0.00 41.21 3.51
3222 4824 3.186613 CCTTTACAAACTGGCGAGACTTC 59.813 47.826 1.44 0.00 0.00 3.01
3237 4839 1.128692 GACTTCGCCTTCAATTCCGTG 59.871 52.381 0.00 0.00 0.00 4.94
3269 4871 1.637553 ACTACCTACTCCCTCCGTTCA 59.362 52.381 0.00 0.00 0.00 3.18
3272 4874 2.547990 ACCTACTCCCTCCGTTCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
3273 4875 2.910977 ACCTACTCCCTCCGTTCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
3275 4877 3.689649 CCTACTCCCTCCGTTCAAATTTG 59.310 47.826 12.15 12.15 0.00 2.32
3276 4878 3.502123 ACTCCCTCCGTTCAAATTTGA 57.498 42.857 16.91 16.91 34.92 2.69
3290 4892 7.743520 TTCAAATTTGAACTAAAACCACGAC 57.256 32.000 26.01 0.00 41.88 4.34
3291 4893 6.853720 TCAAATTTGAACTAAAACCACGACA 58.146 32.000 18.45 0.00 33.55 4.35
3293 4895 7.486551 TCAAATTTGAACTAAAACCACGACAAG 59.513 33.333 18.45 0.00 33.55 3.16
3296 4898 6.981762 TTGAACTAAAACCACGACAAGTAA 57.018 33.333 0.00 0.00 0.00 2.24
3297 4899 6.981762 TGAACTAAAACCACGACAAGTAAA 57.018 33.333 0.00 0.00 0.00 2.01
3298 4900 7.556733 TGAACTAAAACCACGACAAGTAAAT 57.443 32.000 0.00 0.00 0.00 1.40
3327 4949 4.663334 GGAGGGAGTATGTTCCAAAAACT 58.337 43.478 0.47 0.00 39.09 2.66
3433 5055 5.533482 ACATTTGCAAACGCCAGTAAATTA 58.467 33.333 15.41 0.00 29.49 1.40
3459 5081 1.423921 CCGGCTTCATATTAGGGGGTT 59.576 52.381 0.00 0.00 0.00 4.11
3475 5097 6.544928 AGGGGGTTGAATAAAGCAATTTAG 57.455 37.500 0.00 0.00 38.05 1.85
3646 5275 8.674263 TGCCAAAACAAATAAACAGATTGATT 57.326 26.923 0.00 0.00 0.00 2.57
3720 5366 3.576982 CCCCCTTTCCTTTACAAAGTTCC 59.423 47.826 1.32 0.00 34.20 3.62
3801 5454 3.550233 CGCGCTGCTCTAATTTAGTAGGA 60.550 47.826 5.56 1.46 0.00 2.94
3836 5489 4.344865 GGGGTGGGCGAGCTTGAA 62.345 66.667 4.70 0.00 0.00 2.69
3881 5534 2.223203 CGCTTTCATGCAGGTGATCTTC 60.223 50.000 0.00 0.00 0.00 2.87
4240 5922 0.829182 AGGTTGCTTTGGCTGGAAGG 60.829 55.000 0.00 0.00 39.59 3.46
4246 5928 2.025037 TGCTTTGGCTGGAAGGTCATAT 60.025 45.455 0.00 0.00 39.59 1.78
4255 5937 7.350382 TGGCTGGAAGGTCATATACATTTTTA 58.650 34.615 0.00 0.00 30.81 1.52
4298 5980 7.715265 ATGGTAAAGATTAACTATCTGTGCG 57.285 36.000 0.00 0.00 42.90 5.34
4301 5983 6.921857 GGTAAAGATTAACTATCTGTGCGCTA 59.078 38.462 9.73 0.00 42.90 4.26
4364 6046 3.578716 TCGTCTTCTTTCAGAGGAATGGT 59.421 43.478 0.00 0.00 35.29 3.55
4494 6176 6.720112 AATTGTATTGCCTTGATGCTATGT 57.280 33.333 0.00 0.00 0.00 2.29
4500 6182 2.158856 TGCCTTGATGCTATGTGAGGAG 60.159 50.000 0.00 0.00 0.00 3.69
4515 6198 2.750166 TGAGGAGTCGTAGAAGCTTCTG 59.250 50.000 34.26 20.94 39.69 3.02
4520 6203 4.381079 GGAGTCGTAGAAGCTTCTGTCATT 60.381 45.833 34.26 18.86 39.69 2.57
4562 6246 8.442632 TGAAATAGCATGAGGAGAACAATTAG 57.557 34.615 0.00 0.00 0.00 1.73
4572 6256 8.533569 TGAGGAGAACAATTAGTTTCCTTTTT 57.466 30.769 16.11 5.03 42.53 1.94
4603 6287 7.399245 ACTCTGTTCTCATAGGAAGAAGTAC 57.601 40.000 0.00 0.00 0.00 2.73
4633 6318 5.971763 AGTACTCCACAAAAACATGCAAAA 58.028 33.333 0.00 0.00 0.00 2.44
4634 6319 6.402222 AGTACTCCACAAAAACATGCAAAAA 58.598 32.000 0.00 0.00 0.00 1.94
4653 6338 5.888982 AAAAAGTACTCTCTCTGTCCCAA 57.111 39.130 0.00 0.00 0.00 4.12
4654 6339 5.888982 AAAAGTACTCTCTCTGTCCCAAA 57.111 39.130 0.00 0.00 0.00 3.28
4655 6340 5.888982 AAAGTACTCTCTCTGTCCCAAAA 57.111 39.130 0.00 0.00 0.00 2.44
4656 6341 6.441088 AAAGTACTCTCTCTGTCCCAAAAT 57.559 37.500 0.00 0.00 0.00 1.82
4657 6342 7.554959 AAAGTACTCTCTCTGTCCCAAAATA 57.445 36.000 0.00 0.00 0.00 1.40
4658 6343 7.554959 AAGTACTCTCTCTGTCCCAAAATAA 57.445 36.000 0.00 0.00 0.00 1.40
4659 6344 7.176589 AGTACTCTCTCTGTCCCAAAATAAG 57.823 40.000 0.00 0.00 0.00 1.73
4660 6345 6.726764 AGTACTCTCTCTGTCCCAAAATAAGT 59.273 38.462 0.00 0.00 0.00 2.24
4661 6346 5.799213 ACTCTCTCTGTCCCAAAATAAGTG 58.201 41.667 0.00 0.00 0.00 3.16
4662 6347 5.308237 ACTCTCTCTGTCCCAAAATAAGTGT 59.692 40.000 0.00 0.00 0.00 3.55
4663 6348 5.794894 TCTCTCTGTCCCAAAATAAGTGTC 58.205 41.667 0.00 0.00 0.00 3.67
4664 6349 5.544176 TCTCTCTGTCCCAAAATAAGTGTCT 59.456 40.000 0.00 0.00 0.00 3.41
4665 6350 5.794894 TCTCTGTCCCAAAATAAGTGTCTC 58.205 41.667 0.00 0.00 0.00 3.36
4666 6351 5.306937 TCTCTGTCCCAAAATAAGTGTCTCA 59.693 40.000 0.00 0.00 0.00 3.27
4667 6352 5.935945 TCTGTCCCAAAATAAGTGTCTCAA 58.064 37.500 0.00 0.00 0.00 3.02
4668 6353 5.763204 TCTGTCCCAAAATAAGTGTCTCAAC 59.237 40.000 0.00 0.00 0.00 3.18
4669 6354 5.690865 TGTCCCAAAATAAGTGTCTCAACT 58.309 37.500 0.00 0.00 0.00 3.16
4670 6355 6.126409 TGTCCCAAAATAAGTGTCTCAACTT 58.874 36.000 0.00 0.00 42.89 2.66
4671 6356 6.605594 TGTCCCAAAATAAGTGTCTCAACTTT 59.394 34.615 0.00 0.00 40.77 2.66
4672 6357 7.776030 TGTCCCAAAATAAGTGTCTCAACTTTA 59.224 33.333 0.00 0.00 40.77 1.85
4673 6358 8.290325 GTCCCAAAATAAGTGTCTCAACTTTAG 58.710 37.037 0.00 0.00 40.77 1.85
4674 6359 7.996644 TCCCAAAATAAGTGTCTCAACTTTAGT 59.003 33.333 0.00 0.00 40.77 2.24
4675 6360 9.280174 CCCAAAATAAGTGTCTCAACTTTAGTA 57.720 33.333 0.00 0.00 40.77 1.82
4711 6396 9.310716 ACTAAAGTTAGTACAAAGTTGAGACAC 57.689 33.333 1.81 0.00 41.92 3.67
4712 6397 9.530633 CTAAAGTTAGTACAAAGTTGAGACACT 57.469 33.333 0.00 0.00 0.00 3.55
4713 6398 8.788325 AAAGTTAGTACAAAGTTGAGACACTT 57.212 30.769 0.00 0.98 38.74 3.16
4714 6399 9.880157 AAAGTTAGTACAAAGTTGAGACACTTA 57.120 29.630 0.00 0.00 35.87 2.24
4720 6405 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
4721 6406 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
4722 6407 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
4723 6408 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
4724 6409 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
4725 6410 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
4726 6411 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
4727 6412 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
4728 6413 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4729 6414 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
4733 6418 0.618981 ATTTTGGGACGGAGGGAGTC 59.381 55.000 0.00 0.00 37.86 3.36
4764 6449 6.234177 AGAAGAGGTTTGATGAGGTTGTTAG 58.766 40.000 0.00 0.00 0.00 2.34
4837 6817 0.622136 TCTCGAGGCCTGGTAGTGTA 59.378 55.000 12.00 0.00 0.00 2.90
4926 6906 4.701651 TGAAGCCTCAATCAGATATGCT 57.298 40.909 0.00 0.00 0.00 3.79
4969 6949 3.998156 CATGCCTTGCAGAGTGCT 58.002 55.556 0.00 0.00 45.31 4.40
4971 6951 1.676746 CATGCCTTGCAGAGTGCTAT 58.323 50.000 0.00 0.00 45.31 2.97
5138 7249 6.055588 TCAAATACTACTCAAGCCCTTATGC 58.944 40.000 0.00 0.00 0.00 3.14
5196 7307 5.183904 AGCAGTGACCATTGAATAAGTTTCC 59.816 40.000 0.00 0.00 0.00 3.13
5217 7328 1.202806 TCAGCTTGAGTTGGGTTCCAG 60.203 52.381 0.00 0.00 33.81 3.86
5226 7337 4.597507 TGAGTTGGGTTCCAGATTCTTACT 59.402 41.667 0.00 0.00 33.81 2.24
5234 7345 9.170890 TGGGTTCCAGATTCTTACTAATATCAT 57.829 33.333 0.00 0.00 0.00 2.45
5263 7374 1.093159 TGTACCCAAAACAAACGCGT 58.907 45.000 5.58 5.58 0.00 6.01
5290 7403 1.737838 CTGCGCTACATCCCTTTTCA 58.262 50.000 9.73 0.00 0.00 2.69
5318 7431 4.463891 CACAGCTTGGGGAACTTCAATATT 59.536 41.667 0.00 0.00 0.00 1.28
5450 7564 5.893824 AGTTGAGGATATCCCAATTGTTTCC 59.106 40.000 18.56 8.27 37.41 3.13
5505 7619 7.341256 CAGTTTCTAGTAACCTCAGGTACCATA 59.659 40.741 15.94 0.00 33.12 2.74
5718 7833 4.751767 TGGAAACCTGAAAATTTGTGCT 57.248 36.364 0.00 0.00 0.00 4.40
5741 7856 9.015577 TGCTGACAAAAATTAACGAAAACTAAG 57.984 29.630 0.00 0.00 0.00 2.18
6054 8169 6.094603 ACAGACCTAGAATTGCACAAATCATC 59.905 38.462 1.60 0.00 0.00 2.92
6067 8182 2.502213 AATCATCCGCAACGTCGATA 57.498 45.000 0.00 0.00 0.00 2.92
6122 8244 2.842496 TCCTGACTCATCTGCCTTCATT 59.158 45.455 0.00 0.00 0.00 2.57
6308 8430 1.259507 TCGTTTCTGTTGCGCAAGTAC 59.740 47.619 25.78 13.97 41.68 2.73
6313 8435 0.579630 CTGTTGCGCAAGTACGTTCA 59.420 50.000 25.78 14.89 41.68 3.18
6320 8442 1.194547 CGCAAGTACGTTCATGTGCTT 59.805 47.619 0.00 0.00 44.15 3.91
6324 8446 2.846193 AGTACGTTCATGTGCTTTGGT 58.154 42.857 0.00 0.00 30.04 3.67
6328 8450 2.126467 CGTTCATGTGCTTTGGTTTGG 58.874 47.619 0.00 0.00 0.00 3.28
6340 8462 6.315144 GTGCTTTGGTTTGGTTCTGTTTAAAT 59.685 34.615 0.00 0.00 0.00 1.40
6343 8465 7.696035 GCTTTGGTTTGGTTCTGTTTAAATTTG 59.304 33.333 0.00 0.00 0.00 2.32
6344 8466 6.670077 TGGTTTGGTTCTGTTTAAATTTGC 57.330 33.333 0.00 0.00 0.00 3.68
6345 8467 5.292101 TGGTTTGGTTCTGTTTAAATTTGCG 59.708 36.000 0.00 0.00 0.00 4.85
6349 8471 3.183574 GGTTCTGTTTAAATTTGCGGCAC 59.816 43.478 0.05 0.00 0.00 5.01
6356 8478 5.403766 TGTTTAAATTTGCGGCACATAACAG 59.596 36.000 0.05 0.00 0.00 3.16
6357 8479 3.932545 AAATTTGCGGCACATAACAGA 57.067 38.095 0.05 0.00 0.00 3.41
6358 8480 3.492421 AATTTGCGGCACATAACAGAG 57.508 42.857 0.05 0.00 0.00 3.35
6369 8491 5.244851 GGCACATAACAGAGGAGATCATCTA 59.755 44.000 0.00 0.00 34.97 1.98
6377 8499 5.139727 CAGAGGAGATCATCTAGGTTCTGT 58.860 45.833 0.00 0.00 34.97 3.41
6378 8500 6.126332 ACAGAGGAGATCATCTAGGTTCTGTA 60.126 42.308 15.79 0.00 34.97 2.74
6379 8501 6.947733 CAGAGGAGATCATCTAGGTTCTGTAT 59.052 42.308 0.00 0.00 34.97 2.29
6380 8502 8.106462 CAGAGGAGATCATCTAGGTTCTGTATA 58.894 40.741 0.00 0.00 34.97 1.47
6381 8503 8.674173 AGAGGAGATCATCTAGGTTCTGTATAA 58.326 37.037 0.00 0.00 34.97 0.98
6382 8504 8.877864 AGGAGATCATCTAGGTTCTGTATAAG 57.122 38.462 0.00 0.00 0.00 1.73
6383 8505 8.674173 AGGAGATCATCTAGGTTCTGTATAAGA 58.326 37.037 0.00 0.00 0.00 2.10
6384 8506 8.956426 GGAGATCATCTAGGTTCTGTATAAGAG 58.044 40.741 0.00 0.00 35.91 2.85
6385 8507 8.348285 AGATCATCTAGGTTCTGTATAAGAGC 57.652 38.462 0.00 0.00 35.91 4.09
6386 8508 7.947332 AGATCATCTAGGTTCTGTATAAGAGCA 59.053 37.037 0.00 0.00 37.85 4.26
6387 8509 8.663209 ATCATCTAGGTTCTGTATAAGAGCAT 57.337 34.615 0.00 0.00 37.85 3.79
6388 8510 8.116651 TCATCTAGGTTCTGTATAAGAGCATC 57.883 38.462 0.00 0.00 37.85 3.91
6401 8523 2.077413 GAGCATCTCCATCGGATGAC 57.923 55.000 19.30 2.03 42.02 3.06
6402 8524 0.316522 AGCATCTCCATCGGATGACG 59.683 55.000 19.30 9.42 42.02 4.35
6403 8525 0.032678 GCATCTCCATCGGATGACGT 59.967 55.000 19.30 0.00 42.02 4.34
6404 8526 1.269723 GCATCTCCATCGGATGACGTA 59.730 52.381 19.30 2.58 42.02 3.57
6405 8527 2.094494 GCATCTCCATCGGATGACGTAT 60.094 50.000 19.30 4.72 42.02 3.06
6406 8528 3.128764 GCATCTCCATCGGATGACGTATA 59.871 47.826 19.30 0.00 42.02 1.47
6407 8529 4.380550 GCATCTCCATCGGATGACGTATAA 60.381 45.833 19.30 0.00 42.02 0.98
6408 8530 5.335935 CATCTCCATCGGATGACGTATAAG 58.664 45.833 19.30 0.25 42.02 1.73
6409 8531 4.648651 TCTCCATCGGATGACGTATAAGA 58.351 43.478 19.30 4.60 44.69 2.10
6410 8532 4.695928 TCTCCATCGGATGACGTATAAGAG 59.304 45.833 19.30 13.31 44.69 2.85
6411 8533 3.190744 TCCATCGGATGACGTATAAGAGC 59.809 47.826 19.30 0.00 44.69 4.09
6412 8534 3.057526 CCATCGGATGACGTATAAGAGCA 60.058 47.826 19.30 0.00 44.69 4.26
6413 8535 4.380973 CCATCGGATGACGTATAAGAGCAT 60.381 45.833 19.30 0.00 44.69 3.79
6414 8536 4.421033 TCGGATGACGTATAAGAGCATC 57.579 45.455 13.40 13.40 44.69 3.91
6415 8537 4.427096 CGGATGACGTATAAGAGCATCT 57.573 45.455 17.73 0.00 43.25 2.90
6416 8538 4.154375 TCGGATGACGTATAAGAGCATCTC 59.846 45.833 17.73 11.40 45.29 2.75
6417 8539 4.155099 CGGATGACGTATAAGAGCATCTCT 59.845 45.833 17.73 0.00 41.22 3.10
6418 8540 5.351740 CGGATGACGTATAAGAGCATCTCTA 59.648 44.000 17.73 0.00 41.22 2.43
6419 8541 6.456315 CGGATGACGTATAAGAGCATCTCTAG 60.456 46.154 17.73 0.00 41.22 2.43
6420 8542 9.718414 CGGATGACGTATAAGAGCATCTCTAGC 62.718 48.148 17.73 0.00 41.22 3.42
6428 8550 3.699411 GAGCATCTCTAGCCAATCCAT 57.301 47.619 0.00 0.00 0.00 3.41
6429 8551 3.598299 GAGCATCTCTAGCCAATCCATC 58.402 50.000 0.00 0.00 0.00 3.51
6430 8552 2.977580 AGCATCTCTAGCCAATCCATCA 59.022 45.455 0.00 0.00 0.00 3.07
6431 8553 3.393609 AGCATCTCTAGCCAATCCATCAA 59.606 43.478 0.00 0.00 0.00 2.57
6432 8554 4.139786 GCATCTCTAGCCAATCCATCAAA 58.860 43.478 0.00 0.00 0.00 2.69
6433 8555 4.581824 GCATCTCTAGCCAATCCATCAAAA 59.418 41.667 0.00 0.00 0.00 2.44
6434 8556 5.243283 GCATCTCTAGCCAATCCATCAAAAT 59.757 40.000 0.00 0.00 0.00 1.82
6435 8557 6.239232 GCATCTCTAGCCAATCCATCAAAATT 60.239 38.462 0.00 0.00 0.00 1.82
6436 8558 7.686127 GCATCTCTAGCCAATCCATCAAAATTT 60.686 37.037 0.00 0.00 0.00 1.82
6437 8559 8.853126 CATCTCTAGCCAATCCATCAAAATTTA 58.147 33.333 0.00 0.00 0.00 1.40
6438 8560 8.455903 TCTCTAGCCAATCCATCAAAATTTAG 57.544 34.615 0.00 0.00 0.00 1.85
6439 8561 7.503566 TCTCTAGCCAATCCATCAAAATTTAGG 59.496 37.037 0.00 0.00 0.00 2.69
6440 8562 5.027293 AGCCAATCCATCAAAATTTAGGC 57.973 39.130 0.00 0.00 38.65 3.93
6441 8563 4.129380 GCCAATCCATCAAAATTTAGGCC 58.871 43.478 0.00 0.00 32.50 5.19
6442 8564 4.707105 CCAATCCATCAAAATTTAGGCCC 58.293 43.478 0.00 0.00 0.00 5.80
6443 8565 4.409901 CCAATCCATCAAAATTTAGGCCCT 59.590 41.667 0.00 0.00 0.00 5.19
6444 8566 5.104402 CCAATCCATCAAAATTTAGGCCCTT 60.104 40.000 0.00 0.00 0.00 3.95
6445 8567 6.099557 CCAATCCATCAAAATTTAGGCCCTTA 59.900 38.462 0.00 0.00 0.00 2.69
6446 8568 7.365473 CCAATCCATCAAAATTTAGGCCCTTAA 60.365 37.037 0.00 0.00 0.00 1.85
6447 8569 7.936026 ATCCATCAAAATTTAGGCCCTTAAT 57.064 32.000 0.00 0.00 0.00 1.40
6448 8570 9.445973 AATCCATCAAAATTTAGGCCCTTAATA 57.554 29.630 0.00 0.00 0.00 0.98
6449 8571 9.619842 ATCCATCAAAATTTAGGCCCTTAATAT 57.380 29.630 0.00 0.00 0.00 1.28
6454 8576 8.811994 TCAAAATTTAGGCCCTTAATATATGCC 58.188 33.333 0.00 3.36 42.48 4.40
6455 8577 7.733773 AAATTTAGGCCCTTAATATATGCCC 57.266 36.000 0.00 0.00 43.18 5.36
6456 8578 4.873724 TTAGGCCCTTAATATATGCCCC 57.126 45.455 0.00 0.00 43.18 5.80
6457 8579 1.930204 AGGCCCTTAATATATGCCCCC 59.070 52.381 0.00 0.00 43.18 5.40
6473 8595 1.670059 CCCCCTTTACCTCAACTCCT 58.330 55.000 0.00 0.00 0.00 3.69
6474 8596 1.993301 CCCCCTTTACCTCAACTCCTT 59.007 52.381 0.00 0.00 0.00 3.36
6503 8625 1.408969 ACAACCGGACTTGGCAAATT 58.591 45.000 9.46 0.00 0.00 1.82
6505 8627 1.339610 CAACCGGACTTGGCAAATTCA 59.660 47.619 9.46 0.00 0.00 2.57
6519 8641 0.596082 AATTCAACCCCTCAAACGCG 59.404 50.000 3.53 3.53 0.00 6.01
6521 8643 4.038080 CAACCCCTCAAACGCGCC 62.038 66.667 5.73 0.00 0.00 6.53
6522 8644 4.265056 AACCCCTCAAACGCGCCT 62.265 61.111 5.73 0.00 0.00 5.52
6531 8667 4.988598 AACGCGCCTGGACACTGG 62.989 66.667 5.73 0.00 38.63 4.00
6550 8686 0.109132 GCCGGTCAAGCCTCAAATTG 60.109 55.000 1.90 0.00 34.25 2.32
6553 8689 1.879380 CGGTCAAGCCTCAAATTGTCA 59.121 47.619 0.00 0.00 34.25 3.58
6592 8728 8.757982 ACACCTCAATTAGCATATCTCAAATT 57.242 30.769 0.00 0.00 0.00 1.82
6620 8756 3.128852 ACCCATGCAACTACGTAAACA 57.871 42.857 0.00 0.00 0.00 2.83
6630 8773 5.684850 CAACTACGTAAACAATGCACATCA 58.315 37.500 0.00 0.00 0.00 3.07
6633 8776 5.874810 ACTACGTAAACAATGCACATCATCT 59.125 36.000 0.00 0.00 33.40 2.90
6634 8777 7.039270 ACTACGTAAACAATGCACATCATCTA 58.961 34.615 0.00 0.00 33.40 1.98
6636 8779 5.294306 ACGTAAACAATGCACATCATCTAGG 59.706 40.000 0.00 0.00 33.40 3.02
6659 8808 3.603532 ACTACAACATGCCATCAGACTG 58.396 45.455 0.00 0.00 0.00 3.51
6660 8809 2.574006 ACAACATGCCATCAGACTGT 57.426 45.000 1.59 0.00 0.00 3.55
6670 8819 5.782047 TGCCATCAGACTGTAAAAATTTGG 58.218 37.500 1.59 0.49 0.00 3.28
6672 8821 5.567423 GCCATCAGACTGTAAAAATTTGGCT 60.567 40.000 1.59 0.00 41.97 4.75
6706 8855 1.866015 TGGAGAAGATCATCCACGGT 58.134 50.000 9.56 0.00 40.70 4.83
6715 8882 1.603455 CATCCACGGTTGCCCTTGT 60.603 57.895 0.00 0.00 0.00 3.16
6729 8896 1.209383 CTTGTCGTCCTTCTCGCGA 59.791 57.895 9.26 9.26 0.00 5.87
6753 8920 4.005650 AGTACCGATCGAAGACACAGTAA 58.994 43.478 18.66 0.00 42.51 2.24
6897 9097 2.825264 GGATGGCTTCCTCCTCCG 59.175 66.667 11.96 0.00 41.78 4.63
6899 9099 2.688666 ATGGCTTCCTCCTCCGCA 60.689 61.111 0.00 0.00 0.00 5.69
6900 9100 2.049627 GATGGCTTCCTCCTCCGCAT 62.050 60.000 0.00 0.00 0.00 4.73
6977 9203 3.925630 CTTCCCACGGCAGGCACAT 62.926 63.158 0.00 0.00 0.00 3.21
6978 9204 3.505790 TTCCCACGGCAGGCACATT 62.506 57.895 0.00 0.00 0.00 2.71
7001 9227 2.820454 TCCCGGTGGGACTCATAGTCT 61.820 57.143 0.00 0.00 46.17 3.24
7005 9231 0.466124 GTGGGACTCATAGTCTGCCC 59.534 60.000 6.99 0.00 44.46 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 59 6.316140 TCAGAAAACCTAATGATTCACGATGG 59.684 38.462 0.00 0.00 0.00 3.51
75 77 9.874205 GTGATTTATCCCAATGAATTCAGAAAA 57.126 29.630 14.54 8.91 0.00 2.29
107 109 9.961265 CAATTCATATGAGTTTATGATTGTGCT 57.039 29.630 10.52 0.00 38.16 4.40
108 110 9.740239 ACAATTCATATGAGTTTATGATTGTGC 57.260 29.630 20.81 0.00 37.96 4.57
194 198 5.959512 ACCTTCTAGGCATCTACACTATCT 58.040 41.667 0.00 0.00 39.63 1.98
195 199 7.169591 TCTACCTTCTAGGCATCTACACTATC 58.830 42.308 0.00 0.00 39.63 2.08
208 214 5.241506 CAGCAGATCTTCTCTACCTTCTAGG 59.758 48.000 0.00 0.00 34.72 3.02
214 220 2.948979 CGTCAGCAGATCTTCTCTACCT 59.051 50.000 0.00 0.00 31.13 3.08
215 221 2.685897 ACGTCAGCAGATCTTCTCTACC 59.314 50.000 0.00 0.00 31.13 3.18
242 248 9.170734 TGAGATCCTTTCATACAAAAGATCTTG 57.829 33.333 9.17 0.09 38.30 3.02
256 262 7.231317 GCCACCATATATTTTGAGATCCTTTCA 59.769 37.037 0.00 0.00 0.00 2.69
357 363 6.367969 CGGACCGATAATTATTAGTGGGAAAG 59.632 42.308 8.64 0.00 0.00 2.62
362 368 5.107220 GCAACGGACCGATAATTATTAGTGG 60.107 44.000 23.38 2.96 0.00 4.00
407 414 4.895224 AATCACAGTGATTGCATGCTAG 57.105 40.909 25.24 1.34 44.68 3.42
408 415 5.647225 TGTAAATCACAGTGATTGCATGCTA 59.353 36.000 26.29 12.49 45.57 3.49
409 416 4.460034 TGTAAATCACAGTGATTGCATGCT 59.540 37.500 26.29 13.78 45.57 3.79
435 445 8.412456 TGCATAATTACACCAACAATAAGATGG 58.588 33.333 0.00 0.00 45.18 3.51
583 596 8.454570 AGAAACGAAAAGTTCCATTTACCTTA 57.545 30.769 0.00 0.00 43.37 2.69
615 628 8.639761 AGTAGATACGTAAAGTTCCATATGCTT 58.360 33.333 0.00 0.00 0.00 3.91
643 657 9.090692 CCCATATAAGAATTTCAAGTTTGCAAG 57.909 33.333 0.00 0.00 0.00 4.01
645 659 7.398618 TCCCCATATAAGAATTTCAAGTTTGCA 59.601 33.333 0.00 0.00 0.00 4.08
646 660 7.781056 TCCCCATATAAGAATTTCAAGTTTGC 58.219 34.615 0.00 0.00 0.00 3.68
647 661 9.189156 TCTCCCCATATAAGAATTTCAAGTTTG 57.811 33.333 0.00 0.00 0.00 2.93
649 663 9.359653 CATCTCCCCATATAAGAATTTCAAGTT 57.640 33.333 0.00 0.00 0.00 2.66
650 664 7.449704 GCATCTCCCCATATAAGAATTTCAAGT 59.550 37.037 0.00 0.00 0.00 3.16
651 665 7.668886 AGCATCTCCCCATATAAGAATTTCAAG 59.331 37.037 0.00 0.00 0.00 3.02
652 666 7.529555 AGCATCTCCCCATATAAGAATTTCAA 58.470 34.615 0.00 0.00 0.00 2.69
653 667 7.095183 AGCATCTCCCCATATAAGAATTTCA 57.905 36.000 0.00 0.00 0.00 2.69
654 668 7.576477 GCAAGCATCTCCCCATATAAGAATTTC 60.576 40.741 0.00 0.00 0.00 2.17
655 669 6.210185 GCAAGCATCTCCCCATATAAGAATTT 59.790 38.462 0.00 0.00 0.00 1.82
656 670 5.713861 GCAAGCATCTCCCCATATAAGAATT 59.286 40.000 0.00 0.00 0.00 2.17
657 671 5.222192 TGCAAGCATCTCCCCATATAAGAAT 60.222 40.000 0.00 0.00 0.00 2.40
658 672 4.104579 TGCAAGCATCTCCCCATATAAGAA 59.895 41.667 0.00 0.00 0.00 2.52
659 673 3.652387 TGCAAGCATCTCCCCATATAAGA 59.348 43.478 0.00 0.00 0.00 2.10
660 674 4.025040 TGCAAGCATCTCCCCATATAAG 57.975 45.455 0.00 0.00 0.00 1.73
661 675 4.451891 TTGCAAGCATCTCCCCATATAA 57.548 40.909 0.00 0.00 0.00 0.98
662 676 4.141181 AGTTTGCAAGCATCTCCCCATATA 60.141 41.667 16.04 0.00 0.00 0.86
665 679 1.188863 GTTTGCAAGCATCTCCCCAT 58.811 50.000 8.58 0.00 0.00 4.00
710 724 2.206576 ACATCCTTGTCTTGGGCTTC 57.793 50.000 0.00 0.00 0.00 3.86
815 832 4.209703 GCAACGGCGCTTTATATAACTGTA 59.790 41.667 6.90 0.00 0.00 2.74
892 909 0.468226 GAGTGTGGTTGGTGAGGTGA 59.532 55.000 0.00 0.00 0.00 4.02
893 910 0.535102 GGAGTGTGGTTGGTGAGGTG 60.535 60.000 0.00 0.00 0.00 4.00
894 911 0.694444 AGGAGTGTGGTTGGTGAGGT 60.694 55.000 0.00 0.00 0.00 3.85
895 912 0.035458 GAGGAGTGTGGTTGGTGAGG 59.965 60.000 0.00 0.00 0.00 3.86
896 913 1.001406 GAGAGGAGTGTGGTTGGTGAG 59.999 57.143 0.00 0.00 0.00 3.51
1224 1263 4.570663 GGGAGGTCGTCATCGCCG 62.571 72.222 0.20 0.00 37.94 6.46
1297 1342 2.266055 CTCCCTCCTGTTGACCGC 59.734 66.667 0.00 0.00 0.00 5.68
1299 1344 2.671682 GCCTCCCTCCTGTTGACC 59.328 66.667 0.00 0.00 0.00 4.02
1580 1628 6.006275 AGATGCTACTGTGTGGGAAAATAT 57.994 37.500 0.00 0.00 0.00 1.28
1589 1637 3.931468 CAGAAAGGAGATGCTACTGTGTG 59.069 47.826 0.00 0.00 0.00 3.82
1590 1638 3.580458 ACAGAAAGGAGATGCTACTGTGT 59.420 43.478 11.19 0.00 36.11 3.72
1591 1639 3.931468 CACAGAAAGGAGATGCTACTGTG 59.069 47.826 18.79 18.79 44.27 3.66
1592 1640 3.055530 CCACAGAAAGGAGATGCTACTGT 60.056 47.826 0.00 0.00 37.56 3.55
1593 1641 3.055530 ACCACAGAAAGGAGATGCTACTG 60.056 47.826 0.00 0.00 0.00 2.74
1605 1653 1.065401 TGAAGCGCAAACCACAGAAAG 59.935 47.619 11.47 0.00 0.00 2.62
1697 1769 2.606725 CCGACTCGTACGACAATCTACT 59.393 50.000 15.28 0.00 0.00 2.57
1711 1783 2.815647 GAGCCAAAGCCCGACTCG 60.816 66.667 0.00 0.00 41.25 4.18
1757 1829 1.337817 CCTGAAGCGACGTCGACAAG 61.338 60.000 39.74 27.00 43.02 3.16
1812 1885 1.369091 CGCCCCATTTCTCACCGAAG 61.369 60.000 0.00 0.00 32.21 3.79
1813 1886 1.376683 CGCCCCATTTCTCACCGAA 60.377 57.895 0.00 0.00 0.00 4.30
1814 1887 2.267642 CGCCCCATTTCTCACCGA 59.732 61.111 0.00 0.00 0.00 4.69
1815 1888 3.508840 GCGCCCCATTTCTCACCG 61.509 66.667 0.00 0.00 0.00 4.94
1816 1889 3.508840 CGCGCCCCATTTCTCACC 61.509 66.667 0.00 0.00 0.00 4.02
1817 1890 4.179579 GCGCGCCCCATTTCTCAC 62.180 66.667 23.24 0.00 0.00 3.51
1829 1902 1.204312 GAGAAATATTCCCGCGCGC 59.796 57.895 27.36 23.91 0.00 6.86
1830 1903 0.508641 CAGAGAAATATTCCCGCGCG 59.491 55.000 25.67 25.67 0.00 6.86
1831 1904 0.235926 GCAGAGAAATATTCCCGCGC 59.764 55.000 0.00 0.00 0.00 6.86
1832 1905 1.528586 CAGCAGAGAAATATTCCCGCG 59.471 52.381 0.00 0.00 0.00 6.46
1898 1977 6.631962 AGCACTTAGTAGACTGTCCAATTAC 58.368 40.000 3.76 0.67 0.00 1.89
2014 2127 2.553602 TGTTTGCCAGCAACAGAGTATG 59.446 45.455 4.18 0.00 35.46 2.39
2037 2150 3.769739 TGCTACTCAGAGAAAGGCAAA 57.230 42.857 3.79 0.00 0.00 3.68
2059 2192 1.452110 TTGGCTGATGTGACCGAATG 58.548 50.000 0.00 0.00 0.00 2.67
2096 2229 1.912371 GCTACGGCACCACAAAGCTC 61.912 60.000 0.00 0.00 38.54 4.09
2306 2441 6.958192 AGATGTACTCCCTAAGTGACCTAAAA 59.042 38.462 0.00 0.00 39.11 1.52
2312 2447 5.411781 CACAAGATGTACTCCCTAAGTGAC 58.588 45.833 0.00 0.00 39.11 3.67
2360 2560 5.100259 GCACACGATAGCACTACTAAAGAA 58.900 41.667 0.00 0.00 42.67 2.52
2383 2583 2.622436 GTTCCTGTGCTAAGCTACCAG 58.378 52.381 0.00 0.00 0.00 4.00
2397 2597 3.190535 CCAAATAAGTTCCGTGGTTCCTG 59.809 47.826 0.00 0.00 0.00 3.86
2407 2607 7.104290 AGTTCTAGTGCTACCAAATAAGTTCC 58.896 38.462 0.00 0.00 0.00 3.62
2408 2608 8.549338 AAGTTCTAGTGCTACCAAATAAGTTC 57.451 34.615 0.00 0.00 0.00 3.01
2414 2614 6.613153 AGAGAAGTTCTAGTGCTACCAAAT 57.387 37.500 5.09 0.00 33.23 2.32
2441 2641 7.007697 GCACTAGTCAAACAAAAGTATACACG 58.992 38.462 5.50 0.00 0.00 4.49
2450 2650 7.767261 ACAAAGTATGCACTAGTCAAACAAAA 58.233 30.769 0.00 0.00 33.48 2.44
2514 3032 4.158764 ACTGAAGGTGACTAGTGCATACTC 59.841 45.833 0.00 0.00 42.68 2.59
2553 3071 5.180117 CGCTGGGATTGTATTTGAAGGATAG 59.820 44.000 0.00 0.00 0.00 2.08
2590 3108 6.786967 ACATATTCCTACGGTACAGAGTTT 57.213 37.500 0.00 0.00 0.00 2.66
2602 3120 7.387643 GGATTGGAAGGAGTACATATTCCTAC 58.612 42.308 18.27 9.28 41.02 3.18
2619 3137 1.906574 AGGACTTACTGCGGATTGGAA 59.093 47.619 0.00 0.00 0.00 3.53
2623 3141 3.939592 GCTAAAAGGACTTACTGCGGATT 59.060 43.478 0.00 0.00 0.00 3.01
2651 3169 8.710239 TGCAGTGGGAGTATATATTCAACTAAA 58.290 33.333 7.47 1.00 0.00 1.85
2678 4278 8.806146 ACTAAATAGGAACAACATGAGCAAAAT 58.194 29.630 0.00 0.00 0.00 1.82
2712 4312 5.640189 AGGCTCAGTTCTCAATGAATTTG 57.360 39.130 0.00 0.00 36.99 2.32
2715 4315 7.800092 AGTTATAGGCTCAGTTCTCAATGAAT 58.200 34.615 0.00 0.00 36.99 2.57
2768 4368 3.658757 TGCTACCCTTCAATTGTTTGC 57.341 42.857 5.13 2.98 32.61 3.68
2854 4454 0.537143 AGCAAATGTTCTCCACGCCA 60.537 50.000 0.00 0.00 0.00 5.69
2929 4529 4.991153 TGTTTCTAACAACAATGCACCA 57.009 36.364 0.00 0.00 38.72 4.17
2962 4562 4.702131 GGTTTCAGGCATACAACTTGAGAT 59.298 41.667 0.00 0.00 0.00 2.75
3000 4601 5.614760 CATTGCACTCAAATAAAAGCAAGC 58.385 37.500 0.00 0.00 43.99 4.01
3017 4618 7.718525 ACTGAATCACATAATAATGCATTGCA 58.281 30.769 22.27 14.72 44.86 4.08
3222 4824 1.659098 GAGTACACGGAATTGAAGGCG 59.341 52.381 0.00 0.00 0.00 5.52
3237 4839 5.471797 GGGAGTAGGTAGTAATTCCGAGTAC 59.528 48.000 0.00 0.00 0.00 2.73
3269 4871 7.317390 ACTTGTCGTGGTTTTAGTTCAAATTT 58.683 30.769 0.00 0.00 0.00 1.82
3272 4874 5.883503 ACTTGTCGTGGTTTTAGTTCAAA 57.116 34.783 0.00 0.00 0.00 2.69
3273 4875 6.981762 TTACTTGTCGTGGTTTTAGTTCAA 57.018 33.333 0.00 0.00 0.00 2.69
3275 4877 6.788930 CGATTTACTTGTCGTGGTTTTAGTTC 59.211 38.462 0.00 0.00 33.42 3.01
3276 4878 6.293027 CCGATTTACTTGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 36.17 2.24
3278 4880 5.406175 TCCGATTTACTTGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 36.17 1.85
3279 4881 5.295950 TCCGATTTACTTGTCGTGGTTTTA 58.704 37.500 0.00 0.00 36.17 1.52
3281 4883 3.731089 TCCGATTTACTTGTCGTGGTTT 58.269 40.909 0.00 0.00 36.17 3.27
3282 4884 3.389925 TCCGATTTACTTGTCGTGGTT 57.610 42.857 0.00 0.00 36.17 3.67
3283 4885 3.062042 GTTCCGATTTACTTGTCGTGGT 58.938 45.455 0.00 0.00 36.17 4.16
3284 4886 2.091588 CGTTCCGATTTACTTGTCGTGG 59.908 50.000 0.00 0.00 36.17 4.94
3285 4887 2.091588 CCGTTCCGATTTACTTGTCGTG 59.908 50.000 0.00 0.00 36.17 4.35
3286 4888 2.030007 TCCGTTCCGATTTACTTGTCGT 60.030 45.455 0.00 0.00 36.17 4.34
3287 4889 2.597305 CTCCGTTCCGATTTACTTGTCG 59.403 50.000 0.00 0.00 37.58 4.35
3288 4890 2.928116 CCTCCGTTCCGATTTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3289 4891 2.354403 CCCTCCGTTCCGATTTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3290 4892 2.093869 TCCCTCCGTTCCGATTTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
3291 4893 2.167900 CTCCCTCCGTTCCGATTTACTT 59.832 50.000 0.00 0.00 0.00 2.24
3293 4895 1.479730 ACTCCCTCCGTTCCGATTTAC 59.520 52.381 0.00 0.00 0.00 2.01
3296 4898 1.687123 CATACTCCCTCCGTTCCGATT 59.313 52.381 0.00 0.00 0.00 3.34
3297 4899 1.329256 CATACTCCCTCCGTTCCGAT 58.671 55.000 0.00 0.00 0.00 4.18
3298 4900 0.033796 ACATACTCCCTCCGTTCCGA 60.034 55.000 0.00 0.00 0.00 4.55
3327 4949 7.774134 AGTGCATGCTTTTATTAACATCATCA 58.226 30.769 20.33 0.00 0.00 3.07
3422 5044 3.078594 CCGGTTGCATAATTTACTGGC 57.921 47.619 0.00 0.00 30.86 4.85
3433 5055 3.149196 CCTAATATGAAGCCGGTTGCAT 58.851 45.455 16.89 16.89 44.83 3.96
3522 5145 8.963130 CAAAAGTGCGTATTAATTCTTTGTTCA 58.037 29.630 0.00 0.00 0.00 3.18
3619 5248 8.498054 TCAATCTGTTTATTTGTTTTGGCAAA 57.502 26.923 8.93 8.93 41.77 3.68
3662 5291 3.806949 AGGACTGGGTCTAAAATGCAA 57.193 42.857 0.00 0.00 32.47 4.08
3744 5391 1.476007 AAGCGGCAGAACACCTCTCT 61.476 55.000 1.45 0.00 29.07 3.10
3771 5424 4.581648 GAGCAGCGCGATTTCGGC 62.582 66.667 12.10 2.35 40.23 5.54
3773 5426 0.855349 ATTAGAGCAGCGCGATTTCG 59.145 50.000 12.10 0.00 43.27 3.46
3801 5454 7.507956 GCCCACCCCTATATTTTAAACACTAAT 59.492 37.037 0.00 0.00 0.00 1.73
3836 5489 3.004734 GCATGCAAGTGGTTACTCAGTTT 59.995 43.478 14.21 0.00 35.69 2.66
4255 5937 8.958060 TTACCATAATAGCTCCTAATCTCTGT 57.042 34.615 0.00 0.00 0.00 3.41
4298 5980 4.389077 ACGCTCTAAACAAGTCACAATAGC 59.611 41.667 0.00 0.00 0.00 2.97
4301 5983 4.127171 ACACGCTCTAAACAAGTCACAAT 58.873 39.130 0.00 0.00 0.00 2.71
4476 6158 4.102996 TCCTCACATAGCATCAAGGCAATA 59.897 41.667 0.00 0.00 35.83 1.90
4494 6176 2.750166 CAGAAGCTTCTACGACTCCTCA 59.250 50.000 28.02 0.00 35.34 3.86
4500 6182 5.847670 AAAATGACAGAAGCTTCTACGAC 57.152 39.130 28.02 17.00 35.34 4.34
4536 6220 7.893124 AATTGTTCTCCTCATGCTATTTCAT 57.107 32.000 0.00 0.00 0.00 2.57
4572 6256 7.670140 TCTTCCTATGAGAACAGAGTACTTGAA 59.330 37.037 0.00 0.00 34.02 2.69
4603 6287 6.642707 TGTTTTTGTGGAGTACTAAATGGG 57.357 37.500 0.00 0.00 34.75 4.00
4633 6318 5.888982 TTTTGGGACAGAGAGAGTACTTT 57.111 39.130 0.00 0.00 42.39 2.66
4634 6319 7.235812 ACTTATTTTGGGACAGAGAGAGTACTT 59.764 37.037 0.00 0.00 42.39 2.24
4635 6320 6.726764 ACTTATTTTGGGACAGAGAGAGTACT 59.273 38.462 0.00 0.00 42.39 2.73
4636 6321 6.814146 CACTTATTTTGGGACAGAGAGAGTAC 59.186 42.308 0.00 0.00 42.39 2.73
4637 6322 6.497259 ACACTTATTTTGGGACAGAGAGAGTA 59.503 38.462 0.00 0.00 42.39 2.59
4639 6324 5.799213 ACACTTATTTTGGGACAGAGAGAG 58.201 41.667 0.00 0.00 42.39 3.20
4640 6325 5.544176 AGACACTTATTTTGGGACAGAGAGA 59.456 40.000 0.00 0.00 42.39 3.10
4641 6326 5.799213 AGACACTTATTTTGGGACAGAGAG 58.201 41.667 0.00 0.00 42.39 3.20
4642 6327 5.306937 TGAGACACTTATTTTGGGACAGAGA 59.693 40.000 0.00 0.00 42.39 3.10
4643 6328 5.551233 TGAGACACTTATTTTGGGACAGAG 58.449 41.667 0.00 0.00 42.39 3.35
4644 6329 5.560722 TGAGACACTTATTTTGGGACAGA 57.439 39.130 0.00 0.00 42.39 3.41
4645 6330 5.765182 AGTTGAGACACTTATTTTGGGACAG 59.235 40.000 0.00 0.00 42.39 3.51
4646 6331 5.690865 AGTTGAGACACTTATTTTGGGACA 58.309 37.500 0.00 0.00 0.00 4.02
4647 6332 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
4648 6333 7.996644 ACTAAAGTTGAGACACTTATTTTGGGA 59.003 33.333 0.00 0.00 35.87 4.37
4649 6334 8.166422 ACTAAAGTTGAGACACTTATTTTGGG 57.834 34.615 0.00 0.00 35.87 4.12
4685 6370 9.310716 GTGTCTCAACTTTGTACTAACTTTAGT 57.689 33.333 6.85 6.85 45.39 2.24
4686 6371 9.530633 AGTGTCTCAACTTTGTACTAACTTTAG 57.469 33.333 0.00 0.00 36.82 1.85
4687 6372 9.880157 AAGTGTCTCAACTTTGTACTAACTTTA 57.120 29.630 0.00 0.00 37.05 1.85
4688 6373 8.788325 AAGTGTCTCAACTTTGTACTAACTTT 57.212 30.769 0.00 0.00 37.05 2.66
4694 6379 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
4695 6380 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
4696 6381 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
4697 6382 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
4698 6383 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
4699 6384 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
4700 6385 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
4701 6386 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
4702 6387 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
4703 6388 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
4704 6389 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
4705 6390 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
4706 6391 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
4707 6392 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
4708 6393 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
4709 6394 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
4710 6395 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
4711 6396 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
4712 6397 2.237893 GACTCCCTCCGTCCCAAAATAA 59.762 50.000 0.00 0.00 0.00 1.40
4713 6398 1.835531 GACTCCCTCCGTCCCAAAATA 59.164 52.381 0.00 0.00 0.00 1.40
4714 6399 0.618981 GACTCCCTCCGTCCCAAAAT 59.381 55.000 0.00 0.00 0.00 1.82
4715 6400 0.765135 TGACTCCCTCCGTCCCAAAA 60.765 55.000 0.00 0.00 0.00 2.44
4716 6401 0.546747 ATGACTCCCTCCGTCCCAAA 60.547 55.000 0.00 0.00 0.00 3.28
4717 6402 0.337082 TATGACTCCCTCCGTCCCAA 59.663 55.000 0.00 0.00 0.00 4.12
4718 6403 0.561184 ATATGACTCCCTCCGTCCCA 59.439 55.000 0.00 0.00 0.00 4.37
4719 6404 1.718280 AATATGACTCCCTCCGTCCC 58.282 55.000 0.00 0.00 0.00 4.46
4720 6405 4.150359 TCTAAATATGACTCCCTCCGTCC 58.850 47.826 0.00 0.00 0.00 4.79
4721 6406 5.535406 TCTTCTAAATATGACTCCCTCCGTC 59.465 44.000 0.00 0.00 0.00 4.79
4722 6407 5.455872 TCTTCTAAATATGACTCCCTCCGT 58.544 41.667 0.00 0.00 0.00 4.69
4723 6408 5.047660 CCTCTTCTAAATATGACTCCCTCCG 60.048 48.000 0.00 0.00 0.00 4.63
4724 6409 5.841783 ACCTCTTCTAAATATGACTCCCTCC 59.158 44.000 0.00 0.00 0.00 4.30
4725 6410 6.987403 ACCTCTTCTAAATATGACTCCCTC 57.013 41.667 0.00 0.00 0.00 4.30
4726 6411 7.403231 TCAAACCTCTTCTAAATATGACTCCCT 59.597 37.037 0.00 0.00 0.00 4.20
4727 6412 7.565680 TCAAACCTCTTCTAAATATGACTCCC 58.434 38.462 0.00 0.00 0.00 4.30
4728 6413 9.050601 CATCAAACCTCTTCTAAATATGACTCC 57.949 37.037 0.00 0.00 0.00 3.85
4729 6414 9.823647 TCATCAAACCTCTTCTAAATATGACTC 57.176 33.333 0.00 0.00 0.00 3.36
4733 6418 8.970859 ACCTCATCAAACCTCTTCTAAATATG 57.029 34.615 0.00 0.00 0.00 1.78
4764 6449 6.599437 ACATAACGAGTGCTTACATGAAAAC 58.401 36.000 0.00 0.00 0.00 2.43
4870 6850 3.618594 ACAGTTGCAGTGCTAACATATCG 59.381 43.478 23.31 13.15 0.00 2.92
4969 6949 8.561536 TCCCTTCACCTAATACAAGATCAATA 57.438 34.615 0.00 0.00 0.00 1.90
4971 6951 6.884472 TCCCTTCACCTAATACAAGATCAA 57.116 37.500 0.00 0.00 0.00 2.57
5095 7078 5.452078 TTGAAGAGTAAAAATGGCACTGG 57.548 39.130 0.00 0.00 0.00 4.00
5130 7241 8.445493 CAAATCTTTTTAAGCTTTGCATAAGGG 58.555 33.333 3.20 0.00 37.66 3.95
5138 7249 6.287525 TGGTCCCAAATCTTTTTAAGCTTTG 58.712 36.000 3.20 8.15 41.73 2.77
5354 7467 2.672996 ACACCCGTGCCAATCTGC 60.673 61.111 0.00 0.00 0.00 4.26
5450 7564 7.892609 TGTATACACCATAGGCAATACTAGTG 58.107 38.462 5.39 0.00 0.00 2.74
5718 7833 7.974501 TGCCTTAGTTTTCGTTAATTTTTGTCA 59.025 29.630 0.00 0.00 0.00 3.58
5728 7843 5.818857 AGTTCAGTTGCCTTAGTTTTCGTTA 59.181 36.000 0.00 0.00 0.00 3.18
5741 7856 6.092807 CCTGTTATAGAAGAAGTTCAGTTGCC 59.907 42.308 5.50 0.00 34.82 4.52
6080 8195 0.900421 AGGAAGCACGGTAAGGGTAC 59.100 55.000 0.00 0.00 0.00 3.34
6122 8244 3.764434 GACCTCTGTCATTAGTGTCTCCA 59.236 47.826 0.00 0.00 41.37 3.86
6172 8294 5.391312 ACAAATTACCATTTCTCTGCACC 57.609 39.130 0.00 0.00 29.41 5.01
6308 8430 2.126467 CCAAACCAAAGCACATGAACG 58.874 47.619 0.00 0.00 0.00 3.95
6313 8435 2.765699 ACAGAACCAAACCAAAGCACAT 59.234 40.909 0.00 0.00 0.00 3.21
6320 8442 6.183360 CGCAAATTTAAACAGAACCAAACCAA 60.183 34.615 0.00 0.00 0.00 3.67
6324 8446 4.271291 GCCGCAAATTTAAACAGAACCAAA 59.729 37.500 0.00 0.00 0.00 3.28
6328 8450 3.799420 TGTGCCGCAAATTTAAACAGAAC 59.201 39.130 0.00 0.00 0.00 3.01
6340 8462 1.164411 CCTCTGTTATGTGCCGCAAA 58.836 50.000 0.00 0.00 0.00 3.68
6343 8465 0.175760 TCTCCTCTGTTATGTGCCGC 59.824 55.000 0.00 0.00 0.00 6.53
6344 8466 2.101415 TGATCTCCTCTGTTATGTGCCG 59.899 50.000 0.00 0.00 0.00 5.69
6345 8467 3.827008 TGATCTCCTCTGTTATGTGCC 57.173 47.619 0.00 0.00 0.00 5.01
6349 8471 7.451255 AGAACCTAGATGATCTCCTCTGTTATG 59.549 40.741 0.00 0.00 0.00 1.90
6356 8478 8.871629 TTATACAGAACCTAGATGATCTCCTC 57.128 38.462 0.00 0.00 0.00 3.71
6357 8479 8.674173 TCTTATACAGAACCTAGATGATCTCCT 58.326 37.037 0.00 0.00 0.00 3.69
6358 8480 8.871629 TCTTATACAGAACCTAGATGATCTCC 57.128 38.462 0.00 0.00 0.00 3.71
6369 8491 5.211973 TGGAGATGCTCTTATACAGAACCT 58.788 41.667 0.00 0.00 0.00 3.50
6377 8499 5.126222 GTCATCCGATGGAGATGCTCTTATA 59.874 44.000 8.54 0.00 40.79 0.98
6378 8500 4.081752 GTCATCCGATGGAGATGCTCTTAT 60.082 45.833 8.54 0.00 40.79 1.73
6379 8501 3.256879 GTCATCCGATGGAGATGCTCTTA 59.743 47.826 8.54 0.00 40.79 2.10
6380 8502 2.036992 GTCATCCGATGGAGATGCTCTT 59.963 50.000 8.54 0.00 40.79 2.85
6381 8503 1.617850 GTCATCCGATGGAGATGCTCT 59.382 52.381 8.54 0.00 40.79 4.09
6382 8504 1.668337 CGTCATCCGATGGAGATGCTC 60.668 57.143 8.54 0.00 40.79 4.26
6383 8505 0.316522 CGTCATCCGATGGAGATGCT 59.683 55.000 8.54 0.00 40.79 3.79
6384 8506 0.032678 ACGTCATCCGATGGAGATGC 59.967 55.000 8.54 0.00 40.79 3.91
6385 8507 3.857549 ATACGTCATCCGATGGAGATG 57.142 47.619 8.54 0.00 42.08 2.90
6386 8508 5.254115 TCTTATACGTCATCCGATGGAGAT 58.746 41.667 8.54 1.03 40.70 2.75
6387 8509 4.648651 TCTTATACGTCATCCGATGGAGA 58.351 43.478 8.54 0.00 40.70 3.71
6388 8510 4.673061 GCTCTTATACGTCATCCGATGGAG 60.673 50.000 8.54 5.77 40.70 3.86
6389 8511 3.190744 GCTCTTATACGTCATCCGATGGA 59.809 47.826 8.54 0.00 40.70 3.41
6390 8512 3.057526 TGCTCTTATACGTCATCCGATGG 60.058 47.826 8.54 0.00 40.70 3.51
6391 8513 4.160736 TGCTCTTATACGTCATCCGATG 57.839 45.455 1.55 1.55 40.70 3.84
6392 8514 4.702612 AGATGCTCTTATACGTCATCCGAT 59.297 41.667 0.00 0.00 40.70 4.18
6393 8515 4.072839 AGATGCTCTTATACGTCATCCGA 58.927 43.478 0.00 0.00 40.70 4.55
6394 8516 4.155099 AGAGATGCTCTTATACGTCATCCG 59.845 45.833 0.00 0.00 37.60 4.18
6395 8517 5.637006 AGAGATGCTCTTATACGTCATCC 57.363 43.478 0.00 0.00 37.60 3.51
6396 8518 6.255215 GCTAGAGATGCTCTTATACGTCATC 58.745 44.000 1.88 0.00 41.50 2.92
6397 8519 5.124776 GGCTAGAGATGCTCTTATACGTCAT 59.875 44.000 1.88 0.00 41.50 3.06
6398 8520 4.456222 GGCTAGAGATGCTCTTATACGTCA 59.544 45.833 1.88 0.00 41.50 4.35
6399 8521 4.456222 TGGCTAGAGATGCTCTTATACGTC 59.544 45.833 1.88 0.00 41.50 4.34
6400 8522 4.399219 TGGCTAGAGATGCTCTTATACGT 58.601 43.478 1.88 0.00 41.50 3.57
6401 8523 5.378292 TTGGCTAGAGATGCTCTTATACG 57.622 43.478 1.88 0.00 41.50 3.06
6402 8524 6.071108 TGGATTGGCTAGAGATGCTCTTATAC 60.071 42.308 1.88 0.00 41.50 1.47
6403 8525 6.019108 TGGATTGGCTAGAGATGCTCTTATA 58.981 40.000 1.88 0.00 41.50 0.98
6404 8526 4.842948 TGGATTGGCTAGAGATGCTCTTAT 59.157 41.667 1.88 0.00 41.50 1.73
6405 8527 4.226384 TGGATTGGCTAGAGATGCTCTTA 58.774 43.478 1.88 0.00 41.50 2.10
6406 8528 3.044156 TGGATTGGCTAGAGATGCTCTT 58.956 45.455 1.88 0.00 41.50 2.85
6407 8529 2.687297 TGGATTGGCTAGAGATGCTCT 58.313 47.619 0.00 2.22 43.83 4.09
6408 8530 3.007723 TGATGGATTGGCTAGAGATGCTC 59.992 47.826 0.00 0.00 0.00 4.26
6409 8531 2.977580 TGATGGATTGGCTAGAGATGCT 59.022 45.455 0.00 0.00 0.00 3.79
6410 8532 3.413846 TGATGGATTGGCTAGAGATGC 57.586 47.619 0.00 0.00 0.00 3.91
6411 8533 6.896021 ATTTTGATGGATTGGCTAGAGATG 57.104 37.500 0.00 0.00 0.00 2.90
6412 8534 7.909485 AAATTTTGATGGATTGGCTAGAGAT 57.091 32.000 0.00 0.00 0.00 2.75
6413 8535 7.503566 CCTAAATTTTGATGGATTGGCTAGAGA 59.496 37.037 0.00 0.00 0.00 3.10
6414 8536 7.655490 CCTAAATTTTGATGGATTGGCTAGAG 58.345 38.462 0.00 0.00 0.00 2.43
6415 8537 6.040842 GCCTAAATTTTGATGGATTGGCTAGA 59.959 38.462 0.00 0.00 34.42 2.43
6416 8538 6.218746 GCCTAAATTTTGATGGATTGGCTAG 58.781 40.000 0.00 0.00 34.42 3.42
6417 8539 5.070313 GGCCTAAATTTTGATGGATTGGCTA 59.930 40.000 0.00 0.00 37.09 3.93
6418 8540 4.141642 GGCCTAAATTTTGATGGATTGGCT 60.142 41.667 0.00 0.00 37.09 4.75
6419 8541 4.129380 GGCCTAAATTTTGATGGATTGGC 58.871 43.478 0.00 0.00 36.27 4.52
6420 8542 4.409901 AGGGCCTAAATTTTGATGGATTGG 59.590 41.667 2.82 0.00 0.00 3.16
6421 8543 5.619132 AGGGCCTAAATTTTGATGGATTG 57.381 39.130 2.82 0.00 0.00 2.67
6422 8544 7.747809 TTAAGGGCCTAAATTTTGATGGATT 57.252 32.000 6.41 0.00 0.00 3.01
6423 8545 7.936026 ATTAAGGGCCTAAATTTTGATGGAT 57.064 32.000 6.41 0.00 0.00 3.41
6428 8550 8.811994 GGCATATATTAAGGGCCTAAATTTTGA 58.188 33.333 6.41 0.00 41.39 2.69
6429 8551 8.040727 GGGCATATATTAAGGGCCTAAATTTTG 58.959 37.037 6.41 0.93 44.04 2.44
6430 8552 7.182026 GGGGCATATATTAAGGGCCTAAATTTT 59.818 37.037 6.41 0.00 44.69 1.82
6431 8553 6.672218 GGGGCATATATTAAGGGCCTAAATTT 59.328 38.462 6.41 0.00 44.69 1.82
6432 8554 6.202331 GGGGCATATATTAAGGGCCTAAATT 58.798 40.000 6.41 0.00 44.69 1.82
6433 8555 5.341708 GGGGGCATATATTAAGGGCCTAAAT 60.342 44.000 6.41 2.76 44.69 1.40
6434 8556 4.016944 GGGGGCATATATTAAGGGCCTAAA 60.017 45.833 6.41 0.00 44.69 1.85
6435 8557 3.530149 GGGGGCATATATTAAGGGCCTAA 59.470 47.826 6.41 1.79 44.69 2.69
6436 8558 3.128049 GGGGGCATATATTAAGGGCCTA 58.872 50.000 6.41 0.00 44.69 3.93
6437 8559 1.930204 GGGGGCATATATTAAGGGCCT 59.070 52.381 0.00 0.00 44.69 5.19
6438 8560 2.454336 GGGGGCATATATTAAGGGCC 57.546 55.000 0.00 0.00 44.58 5.80
6454 8576 1.670059 AGGAGTTGAGGTAAAGGGGG 58.330 55.000 0.00 0.00 0.00 5.40
6455 8577 4.101856 TCTAAGGAGTTGAGGTAAAGGGG 58.898 47.826 0.00 0.00 0.00 4.79
6456 8578 4.383226 GCTCTAAGGAGTTGAGGTAAAGGG 60.383 50.000 0.00 0.00 41.38 3.95
6457 8579 4.223032 TGCTCTAAGGAGTTGAGGTAAAGG 59.777 45.833 0.00 0.00 41.38 3.11
6458 8580 5.407407 TGCTCTAAGGAGTTGAGGTAAAG 57.593 43.478 0.00 0.00 41.38 1.85
6459 8581 5.721960 AGATGCTCTAAGGAGTTGAGGTAAA 59.278 40.000 0.00 0.00 41.38 2.01
6460 8582 5.273208 AGATGCTCTAAGGAGTTGAGGTAA 58.727 41.667 0.00 0.00 41.38 2.85
6461 8583 4.873010 AGATGCTCTAAGGAGTTGAGGTA 58.127 43.478 0.00 0.00 41.38 3.08
6462 8584 3.718723 AGATGCTCTAAGGAGTTGAGGT 58.281 45.455 0.00 0.00 41.38 3.85
6463 8585 4.646945 TGTAGATGCTCTAAGGAGTTGAGG 59.353 45.833 0.00 0.00 41.38 3.86
6464 8586 5.843673 TGTAGATGCTCTAAGGAGTTGAG 57.156 43.478 0.00 0.00 41.38 3.02
6465 8587 5.105310 GGTTGTAGATGCTCTAAGGAGTTGA 60.105 44.000 0.00 0.00 41.38 3.18
6466 8588 5.112686 GGTTGTAGATGCTCTAAGGAGTTG 58.887 45.833 0.00 0.00 41.38 3.16
6467 8589 4.142138 CGGTTGTAGATGCTCTAAGGAGTT 60.142 45.833 0.00 0.00 41.38 3.01
6468 8590 3.381908 CGGTTGTAGATGCTCTAAGGAGT 59.618 47.826 0.00 0.00 41.38 3.85
6469 8591 3.243569 CCGGTTGTAGATGCTCTAAGGAG 60.244 52.174 0.00 0.00 42.18 3.69
6470 8592 2.693591 CCGGTTGTAGATGCTCTAAGGA 59.306 50.000 0.00 0.00 29.58 3.36
6471 8593 2.693591 TCCGGTTGTAGATGCTCTAAGG 59.306 50.000 0.00 0.00 29.58 2.69
6472 8594 3.381908 AGTCCGGTTGTAGATGCTCTAAG 59.618 47.826 0.00 0.00 29.58 2.18
6473 8595 3.362706 AGTCCGGTTGTAGATGCTCTAA 58.637 45.455 0.00 0.00 29.58 2.10
6474 8596 3.014304 AGTCCGGTTGTAGATGCTCTA 57.986 47.619 0.00 0.00 0.00 2.43
6503 8625 2.975799 GCGCGTTTGAGGGGTTGA 60.976 61.111 8.43 0.00 0.00 3.18
6505 8627 4.265056 AGGCGCGTTTGAGGGGTT 62.265 61.111 8.43 0.00 0.00 4.11
6521 8643 3.177194 TTGACCGGCCAGTGTCCAG 62.177 63.158 0.00 0.00 0.00 3.86
6522 8644 3.164977 TTGACCGGCCAGTGTCCA 61.165 61.111 0.00 0.00 0.00 4.02
6531 8667 0.109132 CAATTTGAGGCTTGACCGGC 60.109 55.000 0.00 0.00 46.52 6.13
6533 8669 1.879380 TGACAATTTGAGGCTTGACCG 59.121 47.619 2.79 0.00 46.52 4.79
6550 8686 1.798813 GTGTCCGGTTGTGAGAATGAC 59.201 52.381 0.00 0.00 0.00 3.06
6553 8689 1.002087 GAGGTGTCCGGTTGTGAGAAT 59.998 52.381 0.00 0.00 0.00 2.40
6592 8728 3.687212 CGTAGTTGCATGGGTTTGTATGA 59.313 43.478 0.00 0.00 0.00 2.15
6602 8738 3.851403 GCATTGTTTACGTAGTTGCATGG 59.149 43.478 0.00 0.00 37.78 3.66
6620 8756 6.731292 TGTAGTACCTAGATGATGTGCATT 57.269 37.500 0.00 0.00 37.34 3.56
6630 8773 5.602561 TGATGGCATGTTGTAGTACCTAGAT 59.397 40.000 3.81 0.00 0.00 1.98
6633 8776 4.959839 TCTGATGGCATGTTGTAGTACCTA 59.040 41.667 3.81 0.00 0.00 3.08
6634 8777 3.774766 TCTGATGGCATGTTGTAGTACCT 59.225 43.478 3.81 0.00 0.00 3.08
6636 8779 4.568359 CAGTCTGATGGCATGTTGTAGTAC 59.432 45.833 3.81 0.00 0.00 2.73
6659 8808 8.603181 CATAGCCAAACATAGCCAAATTTTTAC 58.397 33.333 0.00 0.00 0.00 2.01
6660 8809 7.768120 CCATAGCCAAACATAGCCAAATTTTTA 59.232 33.333 0.00 0.00 0.00 1.52
6670 8819 2.880890 CTCCACCATAGCCAAACATAGC 59.119 50.000 0.00 0.00 0.00 2.97
6672 8821 4.473196 TCTTCTCCACCATAGCCAAACATA 59.527 41.667 0.00 0.00 0.00 2.29
6706 8855 0.034896 GAGAAGGACGACAAGGGCAA 59.965 55.000 0.00 0.00 0.00 4.52
6729 8896 3.255149 ACTGTGTCTTCGATCGGTACTTT 59.745 43.478 16.41 0.00 0.00 2.66
6774 8951 0.607489 CTGCCACCAAAGGAGGACAG 60.607 60.000 3.57 6.63 35.40 3.51
6838 9038 2.279918 AACGGAAGAACACGCGCT 60.280 55.556 5.73 0.00 0.00 5.92
6941 9167 2.744377 GAGAGGATAAGGGCCGCC 59.256 66.667 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.