Multiple sequence alignment - TraesCS1D01G239800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G239800 chr1D 100.000 3150 0 0 1 3150 329727271 329724122 0.000000e+00 5818.0
1 TraesCS1D01G239800 chr1D 84.848 66 9 1 3025 3089 478355135 478355200 7.290000e-07 65.8
2 TraesCS1D01G239800 chr1A 91.439 1647 72 25 556 2162 426882862 426881245 0.000000e+00 2196.0
3 TraesCS1D01G239800 chr1A 83.756 591 65 27 2295 2876 426880740 426880172 5.980000e-147 531.0
4 TraesCS1D01G239800 chr1A 88.462 78 7 2 2202 2278 426881222 426881146 3.350000e-15 93.5
5 TraesCS1D01G239800 chr1B 90.862 1346 48 29 570 1872 444683373 444682060 0.000000e+00 1735.0
6 TraesCS1D01G239800 chr1B 85.225 1022 79 28 1870 2874 444681976 444681010 0.000000e+00 985.0
7 TraesCS1D01G239800 chr1B 89.796 147 12 3 2879 3022 334894506 334894652 5.370000e-43 185.0
8 TraesCS1D01G239800 chr4D 78.788 396 73 9 1159 1544 450148258 450147864 4.030000e-64 255.0
9 TraesCS1D01G239800 chr4B 81.752 274 45 4 1275 1544 562927781 562927509 1.140000e-54 224.0
10 TraesCS1D01G239800 chr4A 81.752 274 45 4 1275 1544 16506158 16506430 1.140000e-54 224.0
11 TraesCS1D01G239800 chr7B 91.724 145 8 4 2881 3022 428829378 428829521 6.890000e-47 198.0
12 TraesCS1D01G239800 chr5A 90.476 147 11 2 2879 3022 653299441 653299587 1.150000e-44 191.0
13 TraesCS1D01G239800 chr5A 88.710 62 5 2 3033 3093 29169043 29169103 1.210000e-09 75.0
14 TraesCS1D01G239800 chr7A 89.726 146 11 4 2881 3022 476915652 476915797 1.930000e-42 183.0
15 TraesCS1D01G239800 chr7A 87.273 55 4 3 3025 3078 132291417 132291469 3.390000e-05 60.2
16 TraesCS1D01G239800 chr7A 100.000 29 0 0 3033 3061 63515014 63514986 2.000000e-03 54.7
17 TraesCS1D01G239800 chr3D 89.796 147 10 4 2879 3022 563861320 563861176 1.930000e-42 183.0
18 TraesCS1D01G239800 chr3D 87.342 158 15 5 2868 3022 91710936 91710781 3.230000e-40 176.0
19 TraesCS1D01G239800 chr2A 89.796 147 10 4 2879 3022 7921049 7920905 1.930000e-42 183.0
20 TraesCS1D01G239800 chr6A 89.116 147 13 2 2879 3022 383964820 383964674 2.500000e-41 180.0
21 TraesCS1D01G239800 chr5D 86.957 161 16 4 2866 3022 150835741 150835582 3.230000e-40 176.0
22 TraesCS1D01G239800 chr5D 86.207 58 7 1 3032 3088 472622087 472622030 9.430000e-06 62.1
23 TraesCS1D01G239800 chr5D 100.000 28 0 0 515 542 170258541 170258568 6.000000e-03 52.8
24 TraesCS1D01G239800 chr6B 79.141 163 20 9 1 155 173575412 173575568 2.000000e-17 100.0
25 TraesCS1D01G239800 chr5B 89.062 64 3 4 3032 3093 34778340 34778401 3.370000e-10 76.8
26 TraesCS1D01G239800 chr5B 79.570 93 12 6 3033 3120 546089090 546089180 3.390000e-05 60.2
27 TraesCS1D01G239800 chr5B 84.483 58 8 1 3032 3088 579600618 579600561 4.390000e-04 56.5
28 TraesCS1D01G239800 chr2D 90.385 52 3 2 3032 3081 28912774 28912723 2.030000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G239800 chr1D 329724122 329727271 3149 True 5818.000000 5818 100.000000 1 3150 1 chr1D.!!$R1 3149
1 TraesCS1D01G239800 chr1A 426880172 426882862 2690 True 940.166667 2196 87.885667 556 2876 3 chr1A.!!$R1 2320
2 TraesCS1D01G239800 chr1B 444681010 444683373 2363 True 1360.000000 1735 88.043500 570 2874 2 chr1B.!!$R1 2304

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
429 430 0.179029 GGTATACGGGCTTGCCACAT 60.179 55.0 14.04 5.68 0.0 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2177 2321 0.320697 AAGAAGAAGACGAACCCCCG 59.679 55.0 0.0 0.0 0.0 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
104 105 9.883142 TTCTCAATAAACTTGGTCAAATTTTGT 57.117 25.926 8.89 0.00 0.00 2.83
105 106 9.311916 TCTCAATAAACTTGGTCAAATTTTGTG 57.688 29.630 8.89 0.00 0.00 3.33
106 107 9.311916 CTCAATAAACTTGGTCAAATTTTGTGA 57.688 29.630 8.89 0.97 0.00 3.58
107 108 9.829507 TCAATAAACTTGGTCAAATTTTGTGAT 57.170 25.926 8.89 0.00 0.00 3.06
108 109 9.866936 CAATAAACTTGGTCAAATTTTGTGATG 57.133 29.630 8.89 1.15 0.00 3.07
109 110 9.612066 AATAAACTTGGTCAAATTTTGTGATGT 57.388 25.926 8.89 1.67 0.00 3.06
110 111 7.920160 AAACTTGGTCAAATTTTGTGATGTT 57.080 28.000 8.89 6.71 0.00 2.71
111 112 7.920160 AACTTGGTCAAATTTTGTGATGTTT 57.080 28.000 8.89 0.00 0.00 2.83
112 113 7.306205 ACTTGGTCAAATTTTGTGATGTTTG 57.694 32.000 8.89 0.00 33.91 2.93
113 114 7.102346 ACTTGGTCAAATTTTGTGATGTTTGA 58.898 30.769 8.89 0.00 38.01 2.69
146 147 5.388225 AAAACTTTGCGCACTAAATTGTG 57.612 34.783 11.12 0.00 40.62 3.33
147 148 3.011949 ACTTTGCGCACTAAATTGTGG 57.988 42.857 11.12 0.00 38.31 4.17
148 149 2.621055 ACTTTGCGCACTAAATTGTGGA 59.379 40.909 11.12 0.00 38.31 4.02
149 150 3.067461 ACTTTGCGCACTAAATTGTGGAA 59.933 39.130 11.12 0.00 38.31 3.53
150 151 3.932545 TTGCGCACTAAATTGTGGAAT 57.067 38.095 11.12 0.00 38.31 3.01
151 152 3.214697 TGCGCACTAAATTGTGGAATG 57.785 42.857 5.66 0.00 38.31 2.67
152 153 2.094803 TGCGCACTAAATTGTGGAATGG 60.095 45.455 5.66 0.00 38.31 3.16
153 154 2.163412 GCGCACTAAATTGTGGAATGGA 59.837 45.455 0.30 0.00 38.31 3.41
154 155 3.731867 GCGCACTAAATTGTGGAATGGAG 60.732 47.826 0.30 0.00 38.31 3.86
155 156 3.181497 CGCACTAAATTGTGGAATGGAGG 60.181 47.826 0.00 0.00 38.31 4.30
156 157 3.131046 GCACTAAATTGTGGAATGGAGGG 59.869 47.826 0.00 0.00 38.31 4.30
157 158 4.599041 CACTAAATTGTGGAATGGAGGGA 58.401 43.478 0.00 0.00 34.56 4.20
158 159 4.641989 CACTAAATTGTGGAATGGAGGGAG 59.358 45.833 0.00 0.00 34.56 4.30
159 160 3.833559 AAATTGTGGAATGGAGGGAGT 57.166 42.857 0.00 0.00 0.00 3.85
160 161 4.946160 AAATTGTGGAATGGAGGGAGTA 57.054 40.909 0.00 0.00 0.00 2.59
161 162 4.946160 AATTGTGGAATGGAGGGAGTAA 57.054 40.909 0.00 0.00 0.00 2.24
162 163 3.713826 TTGTGGAATGGAGGGAGTAAC 57.286 47.619 0.00 0.00 0.00 2.50
163 164 2.626785 TGTGGAATGGAGGGAGTAACA 58.373 47.619 0.00 0.00 0.00 2.41
164 165 2.304761 TGTGGAATGGAGGGAGTAACAC 59.695 50.000 0.00 0.00 0.00 3.32
165 166 2.304761 GTGGAATGGAGGGAGTAACACA 59.695 50.000 0.00 0.00 0.00 3.72
166 167 3.054361 GTGGAATGGAGGGAGTAACACAT 60.054 47.826 0.00 0.00 0.00 3.21
167 168 3.591527 TGGAATGGAGGGAGTAACACATT 59.408 43.478 0.00 0.00 0.00 2.71
168 169 3.947834 GGAATGGAGGGAGTAACACATTG 59.052 47.826 0.00 0.00 0.00 2.82
169 170 4.567747 GGAATGGAGGGAGTAACACATTGT 60.568 45.833 0.00 0.00 0.00 2.71
170 171 5.338871 GGAATGGAGGGAGTAACACATTGTA 60.339 44.000 0.00 0.00 0.00 2.41
171 172 5.975988 ATGGAGGGAGTAACACATTGTAT 57.024 39.130 0.00 0.00 0.00 2.29
172 173 7.419750 GGAATGGAGGGAGTAACACATTGTATA 60.420 40.741 0.00 0.00 0.00 1.47
173 174 7.633018 ATGGAGGGAGTAACACATTGTATAT 57.367 36.000 0.00 0.00 0.00 0.86
174 175 7.446106 TGGAGGGAGTAACACATTGTATATT 57.554 36.000 0.00 0.00 0.00 1.28
175 176 8.555896 TGGAGGGAGTAACACATTGTATATTA 57.444 34.615 0.00 0.00 0.00 0.98
176 177 9.166222 TGGAGGGAGTAACACATTGTATATTAT 57.834 33.333 0.00 0.00 0.00 1.28
180 181 9.227777 GGGAGTAACACATTGTATATTATTCCC 57.772 37.037 20.53 20.53 41.66 3.97
181 182 9.227777 GGAGTAACACATTGTATATTATTCCCC 57.772 37.037 13.09 0.00 29.74 4.81
182 183 9.787435 GAGTAACACATTGTATATTATTCCCCA 57.213 33.333 0.00 0.00 0.00 4.96
183 184 9.569122 AGTAACACATTGTATATTATTCCCCAC 57.431 33.333 0.00 0.00 0.00 4.61
184 185 9.344772 GTAACACATTGTATATTATTCCCCACA 57.655 33.333 0.00 0.00 0.00 4.17
185 186 8.830915 AACACATTGTATATTATTCCCCACAA 57.169 30.769 0.00 0.00 0.00 3.33
186 187 8.830915 ACACATTGTATATTATTCCCCACAAA 57.169 30.769 0.00 0.00 30.48 2.83
187 188 8.912988 ACACATTGTATATTATTCCCCACAAAG 58.087 33.333 0.00 0.00 30.48 2.77
188 189 8.359642 CACATTGTATATTATTCCCCACAAAGG 58.640 37.037 0.00 0.00 30.48 3.11
189 190 8.285891 ACATTGTATATTATTCCCCACAAAGGA 58.714 33.333 0.00 0.00 41.22 3.36
191 192 9.722317 ATTGTATATTATTCCCCACAAAGGAAA 57.278 29.630 0.00 0.00 46.21 3.13
192 193 9.548631 TTGTATATTATTCCCCACAAAGGAAAA 57.451 29.630 0.00 0.00 46.21 2.29
193 194 9.548631 TGTATATTATTCCCCACAAAGGAAAAA 57.451 29.630 0.00 0.00 46.21 1.94
221 222 9.701098 ACACGTTTAGATCATTAGTTTGTTAGA 57.299 29.630 0.00 0.00 0.00 2.10
267 268 7.881775 ATATTGAGTGGATTCCAACTTTACC 57.118 36.000 7.05 0.00 34.18 2.85
268 269 4.028993 TGAGTGGATTCCAACTTTACCC 57.971 45.455 7.05 0.00 34.18 3.69
269 270 3.655777 TGAGTGGATTCCAACTTTACCCT 59.344 43.478 7.05 0.00 34.18 4.34
270 271 4.105697 TGAGTGGATTCCAACTTTACCCTT 59.894 41.667 7.05 0.00 34.18 3.95
271 272 4.407365 AGTGGATTCCAACTTTACCCTTG 58.593 43.478 7.05 0.00 34.18 3.61
272 273 4.105697 AGTGGATTCCAACTTTACCCTTGA 59.894 41.667 7.05 0.00 34.18 3.02
273 274 5.016831 GTGGATTCCAACTTTACCCTTGAT 58.983 41.667 7.05 0.00 34.18 2.57
274 275 5.480422 GTGGATTCCAACTTTACCCTTGATT 59.520 40.000 7.05 0.00 34.18 2.57
275 276 6.014584 GTGGATTCCAACTTTACCCTTGATTT 60.015 38.462 7.05 0.00 34.18 2.17
276 277 6.210584 TGGATTCCAACTTTACCCTTGATTTC 59.789 38.462 1.94 0.00 0.00 2.17
277 278 6.210584 GGATTCCAACTTTACCCTTGATTTCA 59.789 38.462 0.00 0.00 0.00 2.69
278 279 7.093333 GGATTCCAACTTTACCCTTGATTTCAT 60.093 37.037 0.00 0.00 0.00 2.57
279 280 8.893563 ATTCCAACTTTACCCTTGATTTCATA 57.106 30.769 0.00 0.00 0.00 2.15
280 281 8.893563 TTCCAACTTTACCCTTGATTTCATAT 57.106 30.769 0.00 0.00 0.00 1.78
281 282 8.893563 TCCAACTTTACCCTTGATTTCATATT 57.106 30.769 0.00 0.00 0.00 1.28
282 283 9.320295 TCCAACTTTACCCTTGATTTCATATTT 57.680 29.630 0.00 0.00 0.00 1.40
283 284 9.942850 CCAACTTTACCCTTGATTTCATATTTT 57.057 29.630 0.00 0.00 0.00 1.82
340 341 7.496346 TTGAGATTACCCATCTAGTGAAAGT 57.504 36.000 0.00 0.00 42.92 2.66
341 342 7.496346 TGAGATTACCCATCTAGTGAAAGTT 57.504 36.000 0.00 0.00 42.92 2.66
342 343 7.918076 TGAGATTACCCATCTAGTGAAAGTTT 58.082 34.615 0.00 0.00 42.92 2.66
343 344 8.383175 TGAGATTACCCATCTAGTGAAAGTTTT 58.617 33.333 0.00 0.00 42.92 2.43
344 345 8.567285 AGATTACCCATCTAGTGAAAGTTTTG 57.433 34.615 0.00 0.00 40.85 2.44
345 346 6.569179 TTACCCATCTAGTGAAAGTTTTGC 57.431 37.500 0.00 0.00 0.00 3.68
346 347 4.729868 ACCCATCTAGTGAAAGTTTTGCT 58.270 39.130 0.00 0.00 0.00 3.91
347 348 5.876357 ACCCATCTAGTGAAAGTTTTGCTA 58.124 37.500 0.00 0.00 0.00 3.49
348 349 5.940470 ACCCATCTAGTGAAAGTTTTGCTAG 59.060 40.000 15.55 15.55 0.00 3.42
349 350 5.940470 CCCATCTAGTGAAAGTTTTGCTAGT 59.060 40.000 18.58 9.68 33.08 2.57
350 351 6.431234 CCCATCTAGTGAAAGTTTTGCTAGTT 59.569 38.462 18.58 12.33 33.08 2.24
351 352 7.606456 CCCATCTAGTGAAAGTTTTGCTAGTTA 59.394 37.037 18.58 8.23 33.08 2.24
352 353 9.167311 CCATCTAGTGAAAGTTTTGCTAGTTAT 57.833 33.333 18.58 9.50 33.08 1.89
360 361 9.752961 TGAAAGTTTTGCTAGTTATTTTAACCC 57.247 29.630 0.00 0.00 0.00 4.11
361 362 9.976511 GAAAGTTTTGCTAGTTATTTTAACCCT 57.023 29.630 0.00 0.00 0.00 4.34
382 383 8.801882 ACCCTATTTAACGAAAGATTTCATCA 57.198 30.769 6.16 0.00 37.01 3.07
383 384 8.893727 ACCCTATTTAACGAAAGATTTCATCAG 58.106 33.333 6.16 0.00 37.01 2.90
384 385 8.893727 CCCTATTTAACGAAAGATTTCATCAGT 58.106 33.333 6.16 0.00 37.01 3.41
391 392 8.797266 AACGAAAGATTTCATCAGTTTTTACC 57.203 30.769 6.16 0.00 37.01 2.85
392 393 7.368059 ACGAAAGATTTCATCAGTTTTTACCC 58.632 34.615 6.16 0.00 37.01 3.69
393 394 6.806739 CGAAAGATTTCATCAGTTTTTACCCC 59.193 38.462 6.16 0.00 37.01 4.95
394 395 7.523052 CGAAAGATTTCATCAGTTTTTACCCCA 60.523 37.037 6.16 0.00 37.01 4.96
395 396 7.797121 AAGATTTCATCAGTTTTTACCCCAT 57.203 32.000 0.00 0.00 0.00 4.00
396 397 7.797121 AGATTTCATCAGTTTTTACCCCATT 57.203 32.000 0.00 0.00 0.00 3.16
397 398 8.206126 AGATTTCATCAGTTTTTACCCCATTT 57.794 30.769 0.00 0.00 0.00 2.32
398 399 9.320295 AGATTTCATCAGTTTTTACCCCATTTA 57.680 29.630 0.00 0.00 0.00 1.40
399 400 9.586435 GATTTCATCAGTTTTTACCCCATTTAG 57.414 33.333 0.00 0.00 0.00 1.85
400 401 7.475137 TTCATCAGTTTTTACCCCATTTAGG 57.525 36.000 0.00 0.00 37.03 2.69
418 419 8.639761 CCATTTAGGGATCTATTAGGTATACGG 58.360 40.741 0.00 0.00 0.00 4.02
419 420 8.639761 CATTTAGGGATCTATTAGGTATACGGG 58.360 40.741 0.00 0.00 0.00 5.28
420 421 4.544683 AGGGATCTATTAGGTATACGGGC 58.455 47.826 0.00 0.00 0.00 6.13
421 422 4.232354 AGGGATCTATTAGGTATACGGGCT 59.768 45.833 0.00 0.00 0.00 5.19
422 423 4.961099 GGGATCTATTAGGTATACGGGCTT 59.039 45.833 0.00 0.00 0.00 4.35
423 424 5.163437 GGGATCTATTAGGTATACGGGCTTG 60.163 48.000 0.00 0.00 0.00 4.01
424 425 4.796038 TCTATTAGGTATACGGGCTTGC 57.204 45.455 0.00 0.00 0.00 4.01
425 426 2.853235 ATTAGGTATACGGGCTTGCC 57.147 50.000 2.49 2.49 0.00 4.52
426 427 1.498264 TTAGGTATACGGGCTTGCCA 58.502 50.000 14.04 0.00 0.00 4.92
427 428 0.754472 TAGGTATACGGGCTTGCCAC 59.246 55.000 14.04 2.40 0.00 5.01
428 429 1.222387 GGTATACGGGCTTGCCACA 59.778 57.895 14.04 0.00 0.00 4.17
429 430 0.179029 GGTATACGGGCTTGCCACAT 60.179 55.000 14.04 5.68 0.00 3.21
430 431 1.226746 GTATACGGGCTTGCCACATC 58.773 55.000 14.04 0.00 0.00 3.06
431 432 0.249699 TATACGGGCTTGCCACATCG 60.250 55.000 14.04 9.86 0.00 3.84
434 435 3.372730 GGGCTTGCCACATCGCAA 61.373 61.111 14.04 0.00 46.23 4.85
441 442 3.383620 TTGCCACATCGCAAATTTTCT 57.616 38.095 0.00 0.00 45.46 2.52
442 443 2.945278 TGCCACATCGCAAATTTTCTC 58.055 42.857 0.00 0.00 35.32 2.87
443 444 2.557924 TGCCACATCGCAAATTTTCTCT 59.442 40.909 0.00 0.00 35.32 3.10
444 445 3.174375 GCCACATCGCAAATTTTCTCTC 58.826 45.455 0.00 0.00 0.00 3.20
445 446 3.419915 CCACATCGCAAATTTTCTCTCG 58.580 45.455 0.00 0.00 0.00 4.04
446 447 3.419915 CACATCGCAAATTTTCTCTCGG 58.580 45.455 0.00 0.00 0.00 4.63
447 448 3.074412 ACATCGCAAATTTTCTCTCGGT 58.926 40.909 0.00 0.00 0.00 4.69
448 449 4.092821 CACATCGCAAATTTTCTCTCGGTA 59.907 41.667 0.00 0.00 0.00 4.02
449 450 4.876107 ACATCGCAAATTTTCTCTCGGTAT 59.124 37.500 0.00 0.00 0.00 2.73
450 451 5.354234 ACATCGCAAATTTTCTCTCGGTATT 59.646 36.000 0.00 0.00 0.00 1.89
451 452 5.873179 TCGCAAATTTTCTCTCGGTATTT 57.127 34.783 0.00 0.00 0.00 1.40
452 453 6.249035 TCGCAAATTTTCTCTCGGTATTTT 57.751 33.333 0.00 0.00 0.00 1.82
453 454 6.674066 TCGCAAATTTTCTCTCGGTATTTTT 58.326 32.000 0.00 0.00 0.00 1.94
477 478 8.825667 TTTTTCCATGCACCTAAAATACTTTC 57.174 30.769 0.00 0.00 0.00 2.62
478 479 7.531857 TTTCCATGCACCTAAAATACTTTCA 57.468 32.000 0.00 0.00 0.00 2.69
479 480 7.716799 TTCCATGCACCTAAAATACTTTCAT 57.283 32.000 0.00 0.00 0.00 2.57
480 481 7.716799 TCCATGCACCTAAAATACTTTCATT 57.283 32.000 0.00 0.00 0.00 2.57
481 482 8.133024 TCCATGCACCTAAAATACTTTCATTT 57.867 30.769 0.00 0.00 0.00 2.32
482 483 8.592809 TCCATGCACCTAAAATACTTTCATTTT 58.407 29.630 0.00 0.00 40.37 1.82
483 484 9.218440 CCATGCACCTAAAATACTTTCATTTTT 57.782 29.630 0.00 0.00 38.65 1.94
513 514 7.892609 GGGACCTAAAATACTTTCAAATGTGT 58.107 34.615 0.00 0.00 0.00 3.72
514 515 9.016438 GGGACCTAAAATACTTTCAAATGTGTA 57.984 33.333 0.00 0.00 0.00 2.90
523 524 9.553064 AATACTTTCAAATGTGTAAAAATGGCA 57.447 25.926 0.00 0.00 0.00 4.92
524 525 7.856145 ACTTTCAAATGTGTAAAAATGGCAA 57.144 28.000 0.00 0.00 0.00 4.52
525 526 8.449251 ACTTTCAAATGTGTAAAAATGGCAAT 57.551 26.923 0.00 0.00 0.00 3.56
526 527 8.901793 ACTTTCAAATGTGTAAAAATGGCAATT 58.098 25.926 0.00 0.00 0.00 2.32
527 528 9.733219 CTTTCAAATGTGTAAAAATGGCAATTT 57.267 25.926 0.00 0.00 37.61 1.82
548 549 4.674281 TTTTGTGAAATGGGGTAACACC 57.326 40.909 0.00 0.00 42.17 4.16
549 550 3.603965 TTGTGAAATGGGGTAACACCT 57.396 42.857 0.00 0.00 42.17 4.00
550 551 2.870175 TGTGAAATGGGGTAACACCTG 58.130 47.619 0.00 0.00 42.17 4.00
551 552 2.443632 TGTGAAATGGGGTAACACCTGA 59.556 45.455 0.00 0.00 42.17 3.86
552 553 3.075283 TGTGAAATGGGGTAACACCTGAT 59.925 43.478 0.00 0.00 42.17 2.90
553 554 3.443681 GTGAAATGGGGTAACACCTGATG 59.556 47.826 0.00 0.00 42.17 3.07
554 555 3.332187 TGAAATGGGGTAACACCTGATGA 59.668 43.478 0.00 0.00 42.17 2.92
560 561 3.016736 GGGTAACACCTGATGACCATTG 58.983 50.000 0.00 0.00 38.64 2.82
564 565 5.527582 GGTAACACCTGATGACCATTGTATC 59.472 44.000 0.00 0.00 34.73 2.24
566 567 3.782523 ACACCTGATGACCATTGTATCCT 59.217 43.478 0.00 0.00 0.00 3.24
567 568 4.132336 CACCTGATGACCATTGTATCCTG 58.868 47.826 0.00 0.00 0.00 3.86
573 574 6.434302 TGATGACCATTGTATCCTGGAAAAT 58.566 36.000 0.00 0.00 36.35 1.82
580 581 9.881773 ACCATTGTATCCTGGAAAATAATGTAT 57.118 29.630 20.38 11.77 36.35 2.29
633 634 1.335810 TGATAAGGGCGTAGTACAGCG 59.664 52.381 0.38 0.00 0.00 5.18
653 654 2.542205 CGGACAATTATAGCGGTCGTCA 60.542 50.000 0.00 0.00 0.00 4.35
715 718 4.429212 CCACCCATCGCGTCGTGA 62.429 66.667 11.45 11.45 0.00 4.35
722 725 1.796355 ATCGCGTCGTGAGTTGTCG 60.796 57.895 14.58 0.00 0.00 4.35
765 768 3.812203 TGCATACGCAGATGTGGC 58.188 55.556 0.00 0.00 45.36 5.01
821 824 9.042008 TCTTCGATTAGCTGTGAAAATTATACC 57.958 33.333 0.00 0.00 0.00 2.73
822 825 7.724305 TCGATTAGCTGTGAAAATTATACCC 57.276 36.000 0.00 0.00 0.00 3.69
823 826 6.708949 TCGATTAGCTGTGAAAATTATACCCC 59.291 38.462 0.00 0.00 0.00 4.95
824 827 6.072673 CGATTAGCTGTGAAAATTATACCCCC 60.073 42.308 0.00 0.00 0.00 5.40
825 828 4.601406 AGCTGTGAAAATTATACCCCCA 57.399 40.909 0.00 0.00 0.00 4.96
826 829 4.941713 AGCTGTGAAAATTATACCCCCAA 58.058 39.130 0.00 0.00 0.00 4.12
827 830 5.528337 AGCTGTGAAAATTATACCCCCAAT 58.472 37.500 0.00 0.00 0.00 3.16
828 831 5.963865 AGCTGTGAAAATTATACCCCCAATT 59.036 36.000 0.00 0.00 0.00 2.32
829 832 6.048509 GCTGTGAAAATTATACCCCCAATTG 58.951 40.000 0.00 0.00 0.00 2.32
830 833 6.127196 GCTGTGAAAATTATACCCCCAATTGA 60.127 38.462 7.12 0.00 0.00 2.57
831 834 7.580495 GCTGTGAAAATTATACCCCCAATTGAA 60.580 37.037 7.12 0.00 0.00 2.69
832 835 8.386012 TGTGAAAATTATACCCCCAATTGAAT 57.614 30.769 7.12 0.00 0.00 2.57
833 836 8.830741 TGTGAAAATTATACCCCCAATTGAATT 58.169 29.630 7.12 0.14 0.00 2.17
834 837 9.108284 GTGAAAATTATACCCCCAATTGAATTG 57.892 33.333 10.84 10.84 39.94 2.32
835 838 9.051259 TGAAAATTATACCCCCAATTGAATTGA 57.949 29.630 18.82 0.00 42.83 2.57
836 839 9.898152 GAAAATTATACCCCCAATTGAATTGAA 57.102 29.630 18.82 4.20 42.83 2.69
838 841 9.679661 AAATTATACCCCCAATTGAATTGAAAC 57.320 29.630 18.82 0.00 42.83 2.78
937 940 1.875813 AGCGAATTCAGCGAGCGAG 60.876 57.895 6.22 0.00 40.04 5.03
939 942 2.617762 GAATTCAGCGAGCGAGCG 59.382 61.111 0.00 0.00 43.00 5.03
940 943 1.874019 GAATTCAGCGAGCGAGCGA 60.874 57.895 0.00 0.05 43.00 4.93
941 944 2.072038 GAATTCAGCGAGCGAGCGAC 62.072 60.000 0.00 0.00 43.00 5.19
942 945 4.778415 TTCAGCGAGCGAGCGACC 62.778 66.667 1.41 0.00 43.00 4.79
947 950 4.883300 CGAGCGAGCGACCCGTAC 62.883 72.222 0.00 0.00 0.00 3.67
959 962 3.151710 CCGTACCCATCGCCTCCA 61.152 66.667 0.00 0.00 0.00 3.86
1047 1051 3.486383 CAAGGCCTTCTCAGGTTTGTTA 58.514 45.455 17.29 0.00 43.18 2.41
1056 1060 6.255887 CCTTCTCAGGTTTGTTACATCGATAC 59.744 42.308 0.00 0.00 35.06 2.24
1083 1090 4.494484 TGACTCCTACGACATTGTTCATG 58.506 43.478 0.00 0.00 39.07 3.07
1084 1091 4.219725 TGACTCCTACGACATTGTTCATGA 59.780 41.667 0.00 0.00 36.24 3.07
1087 1094 5.582269 ACTCCTACGACATTGTTCATGATTG 59.418 40.000 0.00 0.00 36.24 2.67
1091 1098 8.150296 TCCTACGACATTGTTCATGATTGATAT 58.850 33.333 0.00 0.00 36.24 1.63
1092 1099 8.225777 CCTACGACATTGTTCATGATTGATATG 58.774 37.037 0.00 0.00 36.24 1.78
1138 1165 9.318041 CGATATGGATTTTCGTTGTGATTATTC 57.682 33.333 0.00 0.00 0.00 1.75
1258 1291 2.663196 CGAAAGAGCTTCCCGGGT 59.337 61.111 22.86 0.00 0.00 5.28
1276 1309 0.951040 GTCTGTTCAAGGAGCACGGG 60.951 60.000 0.00 0.00 0.00 5.28
1345 1378 0.321671 TCTCCCGCTTCAAGAACCTG 59.678 55.000 0.00 0.00 0.00 4.00
1414 1447 3.625897 CACGTCCTCCACCAGGCA 61.626 66.667 0.00 0.00 43.08 4.75
1876 2017 1.786937 AGCACATCGAGGAGGATCTT 58.213 50.000 3.06 0.00 33.73 2.40
2177 2321 0.804544 TACAGTATTGCAGACGCGGC 60.805 55.000 12.47 7.86 42.97 6.53
2195 2339 1.972978 CGGGGGTTCGTCTTCTTCT 59.027 57.895 0.00 0.00 0.00 2.85
2204 2348 1.067776 TCGTCTTCTTCTTCTTCCGGC 60.068 52.381 0.00 0.00 0.00 6.13
2341 2877 3.888930 GGCTGATCGGGGATCAAATAAAA 59.111 43.478 9.36 0.00 46.51 1.52
2375 2912 4.518249 GATCTTTCTCTTCCATTCCGGTT 58.482 43.478 0.00 0.00 35.57 4.44
2376 2913 3.939066 TCTTTCTCTTCCATTCCGGTTC 58.061 45.455 0.00 0.00 35.57 3.62
2412 2949 4.357947 GCTCCGTGTCAGTGCCGA 62.358 66.667 0.00 0.00 0.00 5.54
2437 2974 1.142748 GCTGCGGATAGTGTCAGCT 59.857 57.895 12.72 0.00 46.53 4.24
2455 2992 0.462581 CTAAGCGCTGCCCAAGATCA 60.463 55.000 12.58 0.00 0.00 2.92
2550 3087 7.360946 CCTTTCCCTAGAAATTTGTAACTGACG 60.361 40.741 0.00 0.00 41.12 4.35
2592 3129 6.992715 ACTTTAGCTATGTATAAGTTGCCTGG 59.007 38.462 0.00 0.00 0.00 4.45
2595 3132 5.126067 AGCTATGTATAAGTTGCCTGGTTG 58.874 41.667 0.00 0.00 0.00 3.77
2605 3142 5.606348 AGTTGCCTGGTTGTTAAATTTGA 57.394 34.783 0.00 0.00 0.00 2.69
2634 3185 6.664816 AGCCAATTTTCTGACCATTGATTCTA 59.335 34.615 8.80 0.00 30.66 2.10
2665 3229 5.782893 ATTCGTGTTGAATTCCCTCAAAA 57.217 34.783 2.27 0.00 45.06 2.44
2666 3230 5.584253 TTCGTGTTGAATTCCCTCAAAAA 57.416 34.783 2.27 0.00 37.08 1.94
2725 3289 7.117523 TGTTGAATTTTTGACTTGTCCTTGTTG 59.882 33.333 0.00 0.00 0.00 3.33
2775 3340 0.798776 CCCGTTGCTCATTGTCTGTC 59.201 55.000 0.00 0.00 0.00 3.51
2781 3346 4.672413 CGTTGCTCATTGTCTGTCTTTTTC 59.328 41.667 0.00 0.00 0.00 2.29
2784 3360 6.064846 TGCTCATTGTCTGTCTTTTTCTTC 57.935 37.500 0.00 0.00 0.00 2.87
2794 3370 8.397906 TGTCTGTCTTTTTCTTCTATTTGTGTG 58.602 33.333 0.00 0.00 0.00 3.82
2796 3372 7.066887 TCTGTCTTTTTCTTCTATTTGTGTGCA 59.933 33.333 0.00 0.00 0.00 4.57
2809 3385 8.939929 TCTATTTGTGTGCATTTTTGTTTTTCA 58.060 25.926 0.00 0.00 0.00 2.69
2818 3394 9.766277 GTGCATTTTTGTTTTTCATTTTAGTCA 57.234 25.926 0.00 0.00 0.00 3.41
2877 3458 8.816894 AGATGGGTGAGTGTAAATGTATATAGG 58.183 37.037 0.00 0.00 0.00 2.57
2878 3459 8.736097 ATGGGTGAGTGTAAATGTATATAGGA 57.264 34.615 0.00 0.00 0.00 2.94
2879 3460 7.959175 TGGGTGAGTGTAAATGTATATAGGAC 58.041 38.462 0.00 0.00 0.00 3.85
2880 3461 7.787904 TGGGTGAGTGTAAATGTATATAGGACT 59.212 37.037 0.00 0.00 0.00 3.85
2881 3462 8.305317 GGGTGAGTGTAAATGTATATAGGACTC 58.695 40.741 0.00 0.00 0.00 3.36
2882 3463 8.305317 GGTGAGTGTAAATGTATATAGGACTCC 58.695 40.741 0.00 0.00 0.00 3.85
2883 3464 8.305317 GTGAGTGTAAATGTATATAGGACTCCC 58.695 40.741 0.00 0.00 0.00 4.30
2884 3465 8.232412 TGAGTGTAAATGTATATAGGACTCCCT 58.768 37.037 0.00 0.00 46.62 4.20
2885 3466 9.091220 GAGTGTAAATGTATATAGGACTCCCTT 57.909 37.037 0.00 0.00 40.78 3.95
2886 3467 9.091220 AGTGTAAATGTATATAGGACTCCCTTC 57.909 37.037 0.00 0.00 40.78 3.46
2887 3468 8.027771 GTGTAAATGTATATAGGACTCCCTTCG 58.972 40.741 0.00 0.00 40.78 3.79
2888 3469 7.727186 TGTAAATGTATATAGGACTCCCTTCGT 59.273 37.037 0.00 0.00 40.78 3.85
2889 3470 7.613551 AAATGTATATAGGACTCCCTTCGTT 57.386 36.000 0.00 0.00 40.78 3.85
2890 3471 7.613551 AATGTATATAGGACTCCCTTCGTTT 57.386 36.000 0.00 0.00 40.78 3.60
2891 3472 6.645790 TGTATATAGGACTCCCTTCGTTTC 57.354 41.667 0.00 0.00 40.78 2.78
2892 3473 6.371278 TGTATATAGGACTCCCTTCGTTTCT 58.629 40.000 0.00 0.00 40.78 2.52
2893 3474 7.520798 TGTATATAGGACTCCCTTCGTTTCTA 58.479 38.462 0.00 0.00 40.78 2.10
2894 3475 8.000709 TGTATATAGGACTCCCTTCGTTTCTAA 58.999 37.037 0.00 0.00 40.78 2.10
2895 3476 7.909485 ATATAGGACTCCCTTCGTTTCTAAA 57.091 36.000 0.00 0.00 40.78 1.85
2896 3477 6.809976 ATAGGACTCCCTTCGTTTCTAAAT 57.190 37.500 0.00 0.00 40.78 1.40
2897 3478 7.909485 ATAGGACTCCCTTCGTTTCTAAATA 57.091 36.000 0.00 0.00 40.78 1.40
2898 3479 5.975282 AGGACTCCCTTCGTTTCTAAATAC 58.025 41.667 0.00 0.00 40.78 1.89
2899 3480 5.482878 AGGACTCCCTTCGTTTCTAAATACA 59.517 40.000 0.00 0.00 40.78 2.29
2900 3481 6.013984 AGGACTCCCTTCGTTTCTAAATACAA 60.014 38.462 0.00 0.00 40.78 2.41
2901 3482 6.313164 GGACTCCCTTCGTTTCTAAATACAAG 59.687 42.308 0.00 0.00 0.00 3.16
2902 3483 6.766429 ACTCCCTTCGTTTCTAAATACAAGT 58.234 36.000 0.00 0.00 0.00 3.16
2903 3484 6.872547 ACTCCCTTCGTTTCTAAATACAAGTC 59.127 38.462 0.00 0.00 0.00 3.01
2904 3485 6.168389 TCCCTTCGTTTCTAAATACAAGTCC 58.832 40.000 0.00 0.00 0.00 3.85
2905 3486 6.013984 TCCCTTCGTTTCTAAATACAAGTCCT 60.014 38.462 0.00 0.00 0.00 3.85
2906 3487 6.653740 CCCTTCGTTTCTAAATACAAGTCCTT 59.346 38.462 0.00 0.00 0.00 3.36
2907 3488 7.174426 CCCTTCGTTTCTAAATACAAGTCCTTT 59.826 37.037 0.00 0.00 0.00 3.11
2908 3489 8.565416 CCTTCGTTTCTAAATACAAGTCCTTTT 58.435 33.333 0.00 0.00 0.00 2.27
2911 3492 9.985730 TCGTTTCTAAATACAAGTCCTTTTAGA 57.014 29.630 0.00 0.00 38.33 2.10
2923 3504 8.936864 ACAAGTCCTTTTAGAGATTTCAATACG 58.063 33.333 0.00 0.00 0.00 3.06
2924 3505 8.391106 CAAGTCCTTTTAGAGATTTCAATACGG 58.609 37.037 0.00 0.00 0.00 4.02
2925 3506 7.848128 AGTCCTTTTAGAGATTTCAATACGGA 58.152 34.615 0.00 0.00 0.00 4.69
2926 3507 7.764901 AGTCCTTTTAGAGATTTCAATACGGAC 59.235 37.037 0.00 0.00 35.99 4.79
2927 3508 7.764901 GTCCTTTTAGAGATTTCAATACGGACT 59.235 37.037 0.00 0.00 33.70 3.85
2928 3509 8.974238 TCCTTTTAGAGATTTCAATACGGACTA 58.026 33.333 0.00 0.00 0.00 2.59
2929 3510 9.032420 CCTTTTAGAGATTTCAATACGGACTAC 57.968 37.037 0.00 0.00 0.00 2.73
2930 3511 9.582431 CTTTTAGAGATTTCAATACGGACTACA 57.418 33.333 0.00 0.00 0.00 2.74
2935 3516 9.078990 AGAGATTTCAATACGGACTACATATGA 57.921 33.333 10.38 0.00 0.00 2.15
2936 3517 9.692749 GAGATTTCAATACGGACTACATATGAA 57.307 33.333 10.38 0.00 0.00 2.57
2979 3560 7.976734 AGAGTGTAGATTCACTTATTTTCTCCG 59.023 37.037 0.98 0.00 46.81 4.63
2980 3561 7.612677 AGTGTAGATTCACTTATTTTCTCCGT 58.387 34.615 0.00 0.00 44.92 4.69
2981 3562 8.746530 AGTGTAGATTCACTTATTTTCTCCGTA 58.253 33.333 0.00 0.00 44.92 4.02
2982 3563 9.530633 GTGTAGATTCACTTATTTTCTCCGTAT 57.469 33.333 0.00 0.00 35.68 3.06
2983 3564 9.529325 TGTAGATTCACTTATTTTCTCCGTATG 57.471 33.333 0.00 0.00 0.00 2.39
2984 3565 9.745880 GTAGATTCACTTATTTTCTCCGTATGA 57.254 33.333 0.00 0.00 0.00 2.15
2986 3567 9.319143 AGATTCACTTATTTTCTCCGTATGAAG 57.681 33.333 0.00 0.00 0.00 3.02
2987 3568 9.099454 GATTCACTTATTTTCTCCGTATGAAGT 57.901 33.333 0.00 0.00 0.00 3.01
2988 3569 8.475331 TTCACTTATTTTCTCCGTATGAAGTC 57.525 34.615 0.00 0.00 0.00 3.01
2989 3570 7.039882 TCACTTATTTTCTCCGTATGAAGTCC 58.960 38.462 0.00 0.00 0.00 3.85
2990 3571 6.019801 CACTTATTTTCTCCGTATGAAGTCCG 60.020 42.308 0.00 0.00 0.00 4.79
2991 3572 2.288961 TTTCTCCGTATGAAGTCCGC 57.711 50.000 0.00 0.00 0.00 5.54
2992 3573 1.179152 TTCTCCGTATGAAGTCCGCA 58.821 50.000 0.00 0.00 0.00 5.69
2993 3574 1.399714 TCTCCGTATGAAGTCCGCAT 58.600 50.000 0.00 0.00 0.00 4.73
2994 3575 1.754803 TCTCCGTATGAAGTCCGCATT 59.245 47.619 0.00 0.00 0.00 3.56
2995 3576 1.860950 CTCCGTATGAAGTCCGCATTG 59.139 52.381 0.00 0.00 0.00 2.82
2996 3577 1.478916 TCCGTATGAAGTCCGCATTGA 59.521 47.619 0.00 0.00 0.00 2.57
2997 3578 2.093921 TCCGTATGAAGTCCGCATTGAA 60.094 45.455 0.00 0.00 0.00 2.69
2998 3579 2.675844 CCGTATGAAGTCCGCATTGAAA 59.324 45.455 0.00 0.00 0.00 2.69
2999 3580 3.312421 CCGTATGAAGTCCGCATTGAAAT 59.688 43.478 0.00 0.00 0.00 2.17
3000 3581 4.518217 CGTATGAAGTCCGCATTGAAATC 58.482 43.478 0.00 0.00 0.00 2.17
3001 3582 4.271049 CGTATGAAGTCCGCATTGAAATCT 59.729 41.667 0.00 0.00 0.00 2.40
3002 3583 4.889832 ATGAAGTCCGCATTGAAATCTC 57.110 40.909 0.00 0.00 0.00 2.75
3003 3584 3.942829 TGAAGTCCGCATTGAAATCTCT 58.057 40.909 0.00 0.00 0.00 3.10
3004 3585 5.084818 TGAAGTCCGCATTGAAATCTCTA 57.915 39.130 0.00 0.00 0.00 2.43
3005 3586 5.487433 TGAAGTCCGCATTGAAATCTCTAA 58.513 37.500 0.00 0.00 0.00 2.10
3006 3587 5.937540 TGAAGTCCGCATTGAAATCTCTAAA 59.062 36.000 0.00 0.00 0.00 1.85
3007 3588 6.429692 TGAAGTCCGCATTGAAATCTCTAAAA 59.570 34.615 0.00 0.00 0.00 1.52
3008 3589 6.817765 AGTCCGCATTGAAATCTCTAAAAA 57.182 33.333 0.00 0.00 0.00 1.94
3009 3590 6.846350 AGTCCGCATTGAAATCTCTAAAAAG 58.154 36.000 0.00 0.00 0.00 2.27
3010 3591 5.513141 GTCCGCATTGAAATCTCTAAAAAGC 59.487 40.000 0.00 0.00 0.00 3.51
3011 3592 4.800471 CCGCATTGAAATCTCTAAAAAGCC 59.200 41.667 0.00 0.00 0.00 4.35
3012 3593 5.393461 CCGCATTGAAATCTCTAAAAAGCCT 60.393 40.000 0.00 0.00 0.00 4.58
3013 3594 6.095377 CGCATTGAAATCTCTAAAAAGCCTT 58.905 36.000 0.00 0.00 0.00 4.35
3014 3595 7.250569 CGCATTGAAATCTCTAAAAAGCCTTA 58.749 34.615 0.00 0.00 0.00 2.69
3015 3596 7.917505 CGCATTGAAATCTCTAAAAAGCCTTAT 59.082 33.333 0.00 0.00 0.00 1.73
3030 3611 7.454260 AAAGCCTTATATTTAGCCATACTGC 57.546 36.000 0.00 0.00 0.00 4.40
3031 3612 6.126863 AGCCTTATATTTAGCCATACTGCA 57.873 37.500 0.00 0.00 0.00 4.41
3032 3613 6.176183 AGCCTTATATTTAGCCATACTGCAG 58.824 40.000 13.48 13.48 0.00 4.41
3033 3614 5.940470 GCCTTATATTTAGCCATACTGCAGT 59.060 40.000 25.12 25.12 0.00 4.40
3034 3615 6.128172 GCCTTATATTTAGCCATACTGCAGTG 60.128 42.308 29.57 13.91 0.00 3.66
3035 3616 6.936900 CCTTATATTTAGCCATACTGCAGTGT 59.063 38.462 29.57 20.69 0.00 3.55
3036 3617 7.095060 CCTTATATTTAGCCATACTGCAGTGTG 60.095 40.741 30.51 30.51 36.98 3.82
3037 3618 3.694043 TTTAGCCATACTGCAGTGTGA 57.306 42.857 36.53 19.60 39.15 3.58
3038 3619 3.694043 TTAGCCATACTGCAGTGTGAA 57.306 42.857 36.53 23.53 39.15 3.18
3039 3620 2.566833 AGCCATACTGCAGTGTGAAA 57.433 45.000 36.53 16.30 39.15 2.69
3040 3621 2.862541 AGCCATACTGCAGTGTGAAAA 58.137 42.857 36.53 15.56 39.15 2.29
3041 3622 3.424703 AGCCATACTGCAGTGTGAAAAT 58.575 40.909 36.53 19.98 39.15 1.82
3042 3623 3.828451 AGCCATACTGCAGTGTGAAAATT 59.172 39.130 36.53 18.13 39.15 1.82
3043 3624 3.922240 GCCATACTGCAGTGTGAAAATTG 59.078 43.478 36.53 22.74 39.15 2.32
3044 3625 3.922240 CCATACTGCAGTGTGAAAATTGC 59.078 43.478 36.53 0.00 39.15 3.56
3045 3626 4.548494 CATACTGCAGTGTGAAAATTGCA 58.452 39.130 32.96 8.81 43.62 4.08
3046 3627 2.813061 ACTGCAGTGTGAAAATTGCAC 58.187 42.857 20.97 0.00 41.23 4.57
3047 3628 2.428171 ACTGCAGTGTGAAAATTGCACT 59.572 40.909 20.97 0.00 41.23 4.40
3048 3629 3.631686 ACTGCAGTGTGAAAATTGCACTA 59.368 39.130 20.97 0.00 41.23 2.74
3049 3630 4.279169 ACTGCAGTGTGAAAATTGCACTAT 59.721 37.500 20.97 0.00 41.23 2.12
3050 3631 5.199024 TGCAGTGTGAAAATTGCACTATT 57.801 34.783 5.60 0.00 41.23 1.73
3051 3632 6.016360 ACTGCAGTGTGAAAATTGCACTATTA 60.016 34.615 20.97 0.00 41.23 0.98
3052 3633 6.923012 TGCAGTGTGAAAATTGCACTATTAT 58.077 32.000 5.60 0.00 41.23 1.28
3053 3634 8.049655 TGCAGTGTGAAAATTGCACTATTATA 57.950 30.769 5.60 0.00 41.23 0.98
3054 3635 8.685427 TGCAGTGTGAAAATTGCACTATTATAT 58.315 29.630 5.60 0.00 41.23 0.86
3055 3636 8.961092 GCAGTGTGAAAATTGCACTATTATATG 58.039 33.333 5.60 0.00 40.99 1.78
3067 3648 9.796120 TTGCACTATTATATGTTTACCTTTTGC 57.204 29.630 0.00 0.00 0.00 3.68
3068 3649 8.961634 TGCACTATTATATGTTTACCTTTTGCA 58.038 29.630 0.00 0.00 0.00 4.08
3069 3650 9.796120 GCACTATTATATGTTTACCTTTTGCAA 57.204 29.630 0.00 0.00 0.00 4.08
3080 3661 9.220767 TGTTTACCTTTTGCAATTACAAAAAGT 57.779 25.926 17.87 17.87 45.96 2.66
3081 3662 9.484326 GTTTACCTTTTGCAATTACAAAAAGTG 57.516 29.630 20.95 13.51 45.96 3.16
3082 3663 6.117911 ACCTTTTGCAATTACAAAAAGTGC 57.882 33.333 14.56 3.43 45.96 4.40
3083 3664 5.645497 ACCTTTTGCAATTACAAAAAGTGCA 59.355 32.000 14.56 8.59 45.96 4.57
3090 3671 8.430801 TGCAATTACAAAAAGTGCAATTTACT 57.569 26.923 13.16 0.29 41.95 2.24
3091 3672 8.333908 TGCAATTACAAAAAGTGCAATTTACTG 58.666 29.630 13.16 14.87 41.95 2.74
3092 3673 7.321034 GCAATTACAAAAAGTGCAATTTACTGC 59.679 33.333 13.16 4.84 42.95 4.40
3102 3683 3.628017 GCAATTTACTGCAAAGTCGTGT 58.372 40.909 0.00 0.00 42.17 4.49
3103 3684 4.778904 GCAATTTACTGCAAAGTCGTGTA 58.221 39.130 0.00 0.00 42.17 2.90
3104 3685 4.611366 GCAATTTACTGCAAAGTCGTGTAC 59.389 41.667 0.00 0.00 42.17 2.90
3105 3686 5.743467 CAATTTACTGCAAAGTCGTGTACA 58.257 37.500 0.00 0.00 0.00 2.90
3106 3687 5.994887 ATTTACTGCAAAGTCGTGTACAA 57.005 34.783 0.00 0.00 0.00 2.41
3107 3688 5.398176 TTTACTGCAAAGTCGTGTACAAG 57.602 39.130 0.00 0.00 0.00 3.16
3108 3689 3.173668 ACTGCAAAGTCGTGTACAAGA 57.826 42.857 7.45 7.45 0.00 3.02
3109 3690 3.728845 ACTGCAAAGTCGTGTACAAGAT 58.271 40.909 14.65 0.00 0.00 2.40
3110 3691 4.127171 ACTGCAAAGTCGTGTACAAGATT 58.873 39.130 14.65 7.87 0.00 2.40
3111 3692 5.294356 ACTGCAAAGTCGTGTACAAGATTA 58.706 37.500 14.65 0.00 0.00 1.75
3112 3693 5.932303 ACTGCAAAGTCGTGTACAAGATTAT 59.068 36.000 14.65 2.01 0.00 1.28
3113 3694 6.426937 ACTGCAAAGTCGTGTACAAGATTATT 59.573 34.615 14.65 7.69 0.00 1.40
3114 3695 7.041372 ACTGCAAAGTCGTGTACAAGATTATTT 60.041 33.333 14.65 12.53 0.00 1.40
3115 3696 7.644490 TGCAAAGTCGTGTACAAGATTATTTT 58.356 30.769 14.65 10.13 0.00 1.82
3116 3697 8.132362 TGCAAAGTCGTGTACAAGATTATTTTT 58.868 29.630 14.65 8.09 0.00 1.94
3117 3698 9.601971 GCAAAGTCGTGTACAAGATTATTTTTA 57.398 29.630 14.65 0.00 0.00 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 9.883142 ACAAAATTTGACCAAGTTTATTGAGAA 57.117 25.926 13.19 0.00 31.37 2.87
79 80 9.311916 CACAAAATTTGACCAAGTTTATTGAGA 57.688 29.630 13.19 0.00 31.37 3.27
80 81 9.311916 TCACAAAATTTGACCAAGTTTATTGAG 57.688 29.630 13.19 0.80 31.37 3.02
81 82 9.829507 ATCACAAAATTTGACCAAGTTTATTGA 57.170 25.926 13.19 12.30 31.37 2.57
82 83 9.866936 CATCACAAAATTTGACCAAGTTTATTG 57.133 29.630 13.19 3.38 31.37 1.90
83 84 9.612066 ACATCACAAAATTTGACCAAGTTTATT 57.388 25.926 13.19 0.00 31.37 1.40
84 85 9.612066 AACATCACAAAATTTGACCAAGTTTAT 57.388 25.926 13.19 0.00 31.37 1.40
85 86 9.442047 AAACATCACAAAATTTGACCAAGTTTA 57.558 25.926 13.19 0.00 31.37 2.01
86 87 7.920160 AACATCACAAAATTTGACCAAGTTT 57.080 28.000 13.19 0.00 32.66 2.66
87 88 7.605691 TCAAACATCACAAAATTTGACCAAGTT 59.394 29.630 13.19 7.43 36.42 2.66
88 89 7.102346 TCAAACATCACAAAATTTGACCAAGT 58.898 30.769 13.19 1.83 36.42 3.16
89 90 7.536895 TCAAACATCACAAAATTTGACCAAG 57.463 32.000 13.19 1.24 36.42 3.61
123 124 5.220567 CCACAATTTAGTGCGCAAAGTTTTT 60.221 36.000 14.00 0.00 38.18 1.94
124 125 4.269844 CCACAATTTAGTGCGCAAAGTTTT 59.730 37.500 14.00 0.22 38.18 2.43
125 126 3.801594 CCACAATTTAGTGCGCAAAGTTT 59.198 39.130 14.00 0.00 38.18 2.66
126 127 3.067461 TCCACAATTTAGTGCGCAAAGTT 59.933 39.130 14.00 3.87 38.18 2.66
127 128 2.621055 TCCACAATTTAGTGCGCAAAGT 59.379 40.909 14.00 0.00 38.18 2.66
128 129 3.281341 TCCACAATTTAGTGCGCAAAG 57.719 42.857 14.00 0.00 38.18 2.77
129 130 3.717400 TTCCACAATTTAGTGCGCAAA 57.283 38.095 14.00 2.71 38.18 3.68
130 131 3.573598 CATTCCACAATTTAGTGCGCAA 58.426 40.909 14.00 0.00 38.18 4.85
131 132 2.094803 CCATTCCACAATTTAGTGCGCA 60.095 45.455 5.66 5.66 38.18 6.09
132 133 2.163412 TCCATTCCACAATTTAGTGCGC 59.837 45.455 0.00 0.00 38.18 6.09
133 134 3.181497 CCTCCATTCCACAATTTAGTGCG 60.181 47.826 0.00 0.00 38.18 5.34
134 135 3.131046 CCCTCCATTCCACAATTTAGTGC 59.869 47.826 0.00 0.00 38.18 4.40
135 136 4.599041 TCCCTCCATTCCACAATTTAGTG 58.401 43.478 0.00 0.00 39.21 2.74
136 137 4.292306 ACTCCCTCCATTCCACAATTTAGT 59.708 41.667 0.00 0.00 0.00 2.24
137 138 4.860022 ACTCCCTCCATTCCACAATTTAG 58.140 43.478 0.00 0.00 0.00 1.85
138 139 4.946160 ACTCCCTCCATTCCACAATTTA 57.054 40.909 0.00 0.00 0.00 1.40
139 140 3.833559 ACTCCCTCCATTCCACAATTT 57.166 42.857 0.00 0.00 0.00 1.82
140 141 4.044065 TGTTACTCCCTCCATTCCACAATT 59.956 41.667 0.00 0.00 0.00 2.32
141 142 3.591527 TGTTACTCCCTCCATTCCACAAT 59.408 43.478 0.00 0.00 0.00 2.71
142 143 2.983192 TGTTACTCCCTCCATTCCACAA 59.017 45.455 0.00 0.00 0.00 3.33
143 144 2.304761 GTGTTACTCCCTCCATTCCACA 59.695 50.000 0.00 0.00 0.00 4.17
144 145 2.304761 TGTGTTACTCCCTCCATTCCAC 59.695 50.000 0.00 0.00 0.00 4.02
145 146 2.626785 TGTGTTACTCCCTCCATTCCA 58.373 47.619 0.00 0.00 0.00 3.53
146 147 3.933861 ATGTGTTACTCCCTCCATTCC 57.066 47.619 0.00 0.00 0.00 3.01
147 148 4.589908 ACAATGTGTTACTCCCTCCATTC 58.410 43.478 0.00 0.00 0.00 2.67
148 149 4.657814 ACAATGTGTTACTCCCTCCATT 57.342 40.909 0.00 0.00 0.00 3.16
149 150 5.975988 ATACAATGTGTTACTCCCTCCAT 57.024 39.130 0.00 0.00 0.00 3.41
150 151 7.446106 AATATACAATGTGTTACTCCCTCCA 57.554 36.000 0.00 0.00 0.00 3.86
154 155 9.227777 GGGAATAATATACAATGTGTTACTCCC 57.772 37.037 14.16 14.16 0.00 4.30
155 156 9.227777 GGGGAATAATATACAATGTGTTACTCC 57.772 37.037 0.00 2.08 0.00 3.85
156 157 9.787435 TGGGGAATAATATACAATGTGTTACTC 57.213 33.333 0.00 0.00 0.00 2.59
157 158 9.569122 GTGGGGAATAATATACAATGTGTTACT 57.431 33.333 0.00 0.00 0.00 2.24
158 159 9.344772 TGTGGGGAATAATATACAATGTGTTAC 57.655 33.333 0.00 0.00 0.00 2.50
159 160 9.922477 TTGTGGGGAATAATATACAATGTGTTA 57.078 29.630 0.00 0.00 0.00 2.41
160 161 8.830915 TTGTGGGGAATAATATACAATGTGTT 57.169 30.769 0.00 0.00 0.00 3.32
161 162 8.830915 TTTGTGGGGAATAATATACAATGTGT 57.169 30.769 0.00 0.00 0.00 3.72
162 163 8.359642 CCTTTGTGGGGAATAATATACAATGTG 58.640 37.037 0.00 0.00 0.00 3.21
163 164 8.285891 TCCTTTGTGGGGAATAATATACAATGT 58.714 33.333 0.00 0.00 36.20 2.71
164 165 8.704849 TCCTTTGTGGGGAATAATATACAATG 57.295 34.615 0.00 0.00 36.20 2.82
165 166 9.722317 TTTCCTTTGTGGGGAATAATATACAAT 57.278 29.630 0.00 0.00 41.72 2.71
166 167 9.548631 TTTTCCTTTGTGGGGAATAATATACAA 57.451 29.630 0.00 0.00 41.72 2.41
167 168 9.548631 TTTTTCCTTTGTGGGGAATAATATACA 57.451 29.630 0.00 0.00 41.72 2.29
195 196 9.701098 TCTAACAAACTAATGATCTAAACGTGT 57.299 29.630 0.00 0.00 0.00 4.49
241 242 9.403583 GGTAAAGTTGGAATCCACTCAATATTA 57.596 33.333 0.00 0.00 30.78 0.98
242 243 7.342026 GGGTAAAGTTGGAATCCACTCAATATT 59.658 37.037 0.00 0.00 30.78 1.28
243 244 6.833933 GGGTAAAGTTGGAATCCACTCAATAT 59.166 38.462 0.00 0.00 30.78 1.28
244 245 6.011981 AGGGTAAAGTTGGAATCCACTCAATA 60.012 38.462 0.00 0.00 30.78 1.90
245 246 5.016831 GGGTAAAGTTGGAATCCACTCAAT 58.983 41.667 0.00 0.00 30.78 2.57
246 247 4.105697 AGGGTAAAGTTGGAATCCACTCAA 59.894 41.667 0.00 0.00 30.78 3.02
247 248 3.655777 AGGGTAAAGTTGGAATCCACTCA 59.344 43.478 0.00 0.00 30.78 3.41
248 249 4.302559 AGGGTAAAGTTGGAATCCACTC 57.697 45.455 0.00 0.00 30.78 3.51
249 250 4.105697 TCAAGGGTAAAGTTGGAATCCACT 59.894 41.667 0.00 0.00 30.78 4.00
250 251 4.403734 TCAAGGGTAAAGTTGGAATCCAC 58.596 43.478 0.00 0.00 30.78 4.02
251 252 4.733077 TCAAGGGTAAAGTTGGAATCCA 57.267 40.909 0.00 0.00 0.00 3.41
252 253 6.210584 TGAAATCAAGGGTAAAGTTGGAATCC 59.789 38.462 0.00 0.00 0.00 3.01
253 254 7.227049 TGAAATCAAGGGTAAAGTTGGAATC 57.773 36.000 0.00 0.00 0.00 2.52
254 255 7.797121 ATGAAATCAAGGGTAAAGTTGGAAT 57.203 32.000 0.00 0.00 0.00 3.01
255 256 8.893563 ATATGAAATCAAGGGTAAAGTTGGAA 57.106 30.769 0.00 0.00 0.00 3.53
256 257 8.893563 AATATGAAATCAAGGGTAAAGTTGGA 57.106 30.769 0.00 0.00 0.00 3.53
257 258 9.942850 AAAATATGAAATCAAGGGTAAAGTTGG 57.057 29.630 0.00 0.00 0.00 3.77
314 315 9.213777 ACTTTCACTAGATGGGTAATCTCAATA 57.786 33.333 0.00 0.00 42.27 1.90
315 316 8.095452 ACTTTCACTAGATGGGTAATCTCAAT 57.905 34.615 0.00 0.00 42.27 2.57
316 317 7.496346 ACTTTCACTAGATGGGTAATCTCAA 57.504 36.000 0.00 0.00 42.27 3.02
317 318 7.496346 AACTTTCACTAGATGGGTAATCTCA 57.504 36.000 0.00 0.00 42.27 3.27
318 319 8.669243 CAAAACTTTCACTAGATGGGTAATCTC 58.331 37.037 0.00 0.00 42.27 2.75
320 321 7.121315 AGCAAAACTTTCACTAGATGGGTAATC 59.879 37.037 0.00 0.00 35.29 1.75
321 322 6.948309 AGCAAAACTTTCACTAGATGGGTAAT 59.052 34.615 0.00 0.00 0.00 1.89
322 323 6.303839 AGCAAAACTTTCACTAGATGGGTAA 58.696 36.000 0.00 0.00 0.00 2.85
323 324 5.876357 AGCAAAACTTTCACTAGATGGGTA 58.124 37.500 0.00 0.00 0.00 3.69
324 325 4.729868 AGCAAAACTTTCACTAGATGGGT 58.270 39.130 0.00 0.00 0.00 4.51
325 326 5.940470 ACTAGCAAAACTTTCACTAGATGGG 59.060 40.000 13.77 0.00 35.42 4.00
326 327 7.440523 AACTAGCAAAACTTTCACTAGATGG 57.559 36.000 13.77 0.00 35.42 3.51
334 335 9.752961 GGGTTAAAATAACTAGCAAAACTTTCA 57.247 29.630 0.00 0.00 0.00 2.69
335 336 9.976511 AGGGTTAAAATAACTAGCAAAACTTTC 57.023 29.630 0.00 0.00 0.00 2.62
356 357 9.238368 TGATGAAATCTTTCGTTAAATAGGGTT 57.762 29.630 0.00 0.00 45.81 4.11
357 358 8.801882 TGATGAAATCTTTCGTTAAATAGGGT 57.198 30.769 0.00 0.00 45.81 4.34
358 359 8.893727 ACTGATGAAATCTTTCGTTAAATAGGG 58.106 33.333 0.00 0.00 45.81 3.53
365 366 9.887406 GGTAAAAACTGATGAAATCTTTCGTTA 57.113 29.630 0.00 0.00 45.81 3.18
366 367 7.865889 GGGTAAAAACTGATGAAATCTTTCGTT 59.134 33.333 0.00 0.00 45.81 3.85
367 368 7.368059 GGGTAAAAACTGATGAAATCTTTCGT 58.632 34.615 0.00 0.00 45.81 3.85
368 369 6.806739 GGGGTAAAAACTGATGAAATCTTTCG 59.193 38.462 0.00 0.00 45.81 3.46
369 370 7.666623 TGGGGTAAAAACTGATGAAATCTTTC 58.333 34.615 0.00 0.00 45.81 2.62
370 371 7.610580 TGGGGTAAAAACTGATGAAATCTTT 57.389 32.000 0.00 0.00 45.81 2.52
371 372 7.797121 ATGGGGTAAAAACTGATGAAATCTT 57.203 32.000 0.00 0.00 45.81 2.40
372 373 7.797121 AATGGGGTAAAAACTGATGAAATCT 57.203 32.000 0.00 0.00 45.81 2.40
373 374 9.586435 CTAAATGGGGTAAAAACTGATGAAATC 57.414 33.333 0.00 0.00 45.83 2.17
374 375 8.539544 CCTAAATGGGGTAAAAACTGATGAAAT 58.460 33.333 0.00 0.00 0.00 2.17
375 376 7.902087 CCTAAATGGGGTAAAAACTGATGAAA 58.098 34.615 0.00 0.00 0.00 2.69
376 377 7.475137 CCTAAATGGGGTAAAAACTGATGAA 57.525 36.000 0.00 0.00 0.00 2.57
392 393 8.639761 CCGTATACCTAATAGATCCCTAAATGG 58.360 40.741 0.00 0.00 0.00 3.16
393 394 8.639761 CCCGTATACCTAATAGATCCCTAAATG 58.360 40.741 0.00 0.00 0.00 2.32
394 395 7.289549 GCCCGTATACCTAATAGATCCCTAAAT 59.710 40.741 0.00 0.00 0.00 1.40
395 396 6.608808 GCCCGTATACCTAATAGATCCCTAAA 59.391 42.308 0.00 0.00 0.00 1.85
396 397 6.068616 AGCCCGTATACCTAATAGATCCCTAA 60.069 42.308 0.00 0.00 0.00 2.69
397 398 5.434376 AGCCCGTATACCTAATAGATCCCTA 59.566 44.000 0.00 0.00 0.00 3.53
398 399 4.232354 AGCCCGTATACCTAATAGATCCCT 59.768 45.833 0.00 0.00 0.00 4.20
399 400 4.544683 AGCCCGTATACCTAATAGATCCC 58.455 47.826 0.00 0.00 0.00 3.85
400 401 5.681695 GCAAGCCCGTATACCTAATAGATCC 60.682 48.000 0.00 0.00 0.00 3.36
401 402 5.349809 GCAAGCCCGTATACCTAATAGATC 58.650 45.833 0.00 0.00 0.00 2.75
402 403 4.161754 GGCAAGCCCGTATACCTAATAGAT 59.838 45.833 0.00 0.00 0.00 1.98
403 404 3.512724 GGCAAGCCCGTATACCTAATAGA 59.487 47.826 0.00 0.00 0.00 1.98
404 405 3.259876 TGGCAAGCCCGTATACCTAATAG 59.740 47.826 8.89 0.00 35.87 1.73
405 406 3.007182 GTGGCAAGCCCGTATACCTAATA 59.993 47.826 8.89 0.00 35.87 0.98
406 407 2.051692 TGGCAAGCCCGTATACCTAAT 58.948 47.619 8.89 0.00 35.87 1.73
407 408 1.139455 GTGGCAAGCCCGTATACCTAA 59.861 52.381 8.89 0.00 35.87 2.69
408 409 0.754472 GTGGCAAGCCCGTATACCTA 59.246 55.000 8.89 0.00 35.87 3.08
409 410 1.268992 TGTGGCAAGCCCGTATACCT 61.269 55.000 8.89 0.00 35.87 3.08
410 411 0.179029 ATGTGGCAAGCCCGTATACC 60.179 55.000 8.89 0.00 35.87 2.73
411 412 1.226746 GATGTGGCAAGCCCGTATAC 58.773 55.000 8.89 0.00 35.87 1.47
412 413 0.249699 CGATGTGGCAAGCCCGTATA 60.250 55.000 8.89 0.00 35.87 1.47
413 414 1.523711 CGATGTGGCAAGCCCGTAT 60.524 57.895 8.89 0.10 35.87 3.06
414 415 2.125310 CGATGTGGCAAGCCCGTA 60.125 61.111 8.89 0.00 35.87 4.02
422 423 2.557924 AGAGAAAATTTGCGATGTGGCA 59.442 40.909 0.00 0.00 42.12 4.92
423 424 3.174375 GAGAGAAAATTTGCGATGTGGC 58.826 45.455 0.00 0.00 0.00 5.01
424 425 3.419915 CGAGAGAAAATTTGCGATGTGG 58.580 45.455 0.00 0.00 0.00 4.17
425 426 3.120199 ACCGAGAGAAAATTTGCGATGTG 60.120 43.478 0.00 0.00 0.00 3.21
426 427 3.074412 ACCGAGAGAAAATTTGCGATGT 58.926 40.909 0.00 0.00 0.00 3.06
427 428 3.747099 ACCGAGAGAAAATTTGCGATG 57.253 42.857 0.00 0.00 0.00 3.84
428 429 6.436843 AAATACCGAGAGAAAATTTGCGAT 57.563 33.333 0.00 0.00 0.00 4.58
429 430 5.873179 AAATACCGAGAGAAAATTTGCGA 57.127 34.783 0.00 0.00 0.00 5.10
430 431 6.927933 AAAAATACCGAGAGAAAATTTGCG 57.072 33.333 0.00 0.00 0.00 4.85
452 453 8.424918 TGAAAGTATTTTAGGTGCATGGAAAAA 58.575 29.630 0.00 0.00 39.27 1.94
453 454 7.957002 TGAAAGTATTTTAGGTGCATGGAAAA 58.043 30.769 0.00 0.00 39.27 2.29
454 455 7.531857 TGAAAGTATTTTAGGTGCATGGAAA 57.468 32.000 0.00 0.00 39.27 3.13
455 456 7.716799 ATGAAAGTATTTTAGGTGCATGGAA 57.283 32.000 0.00 0.00 39.27 3.53
456 457 7.716799 AATGAAAGTATTTTAGGTGCATGGA 57.283 32.000 0.00 0.00 39.27 3.41
457 458 8.776376 AAAATGAAAGTATTTTAGGTGCATGG 57.224 30.769 0.00 0.00 39.27 3.66
484 485 9.250246 CATTTGAAAGTATTTTAGGTCCCCTAA 57.750 33.333 0.00 0.00 43.47 2.69
485 486 8.395605 ACATTTGAAAGTATTTTAGGTCCCCTA 58.604 33.333 0.00 0.00 39.27 3.53
486 487 7.178451 CACATTTGAAAGTATTTTAGGTCCCCT 59.822 37.037 0.00 0.00 39.27 4.79
487 488 7.039293 ACACATTTGAAAGTATTTTAGGTCCCC 60.039 37.037 0.00 0.00 39.27 4.81
488 489 7.892609 ACACATTTGAAAGTATTTTAGGTCCC 58.107 34.615 0.00 0.00 39.27 4.46
497 498 9.553064 TGCCATTTTTACACATTTGAAAGTATT 57.447 25.926 0.00 0.00 0.00 1.89
498 499 9.553064 TTGCCATTTTTACACATTTGAAAGTAT 57.447 25.926 0.00 0.00 0.00 2.12
499 500 8.948631 TTGCCATTTTTACACATTTGAAAGTA 57.051 26.923 0.00 0.00 0.00 2.24
500 501 7.856145 TTGCCATTTTTACACATTTGAAAGT 57.144 28.000 0.00 0.00 0.00 2.66
501 502 9.733219 AAATTGCCATTTTTACACATTTGAAAG 57.267 25.926 0.00 0.00 0.00 2.62
526 527 4.717280 AGGTGTTACCCCATTTCACAAAAA 59.283 37.500 0.00 0.00 39.75 1.94
527 528 4.100189 CAGGTGTTACCCCATTTCACAAAA 59.900 41.667 0.00 0.00 39.75 2.44
528 529 3.639094 CAGGTGTTACCCCATTTCACAAA 59.361 43.478 0.00 0.00 39.75 2.83
529 530 3.117474 TCAGGTGTTACCCCATTTCACAA 60.117 43.478 0.00 0.00 39.75 3.33
530 531 2.443632 TCAGGTGTTACCCCATTTCACA 59.556 45.455 0.00 0.00 39.75 3.58
531 532 3.149005 TCAGGTGTTACCCCATTTCAC 57.851 47.619 0.00 0.00 39.75 3.18
532 533 3.332187 TCATCAGGTGTTACCCCATTTCA 59.668 43.478 0.00 0.00 39.75 2.69
533 534 3.694566 GTCATCAGGTGTTACCCCATTTC 59.305 47.826 0.00 0.00 39.75 2.17
534 535 3.563479 GGTCATCAGGTGTTACCCCATTT 60.563 47.826 0.00 0.00 39.75 2.32
535 536 2.025321 GGTCATCAGGTGTTACCCCATT 60.025 50.000 0.00 0.00 39.75 3.16
536 537 1.564348 GGTCATCAGGTGTTACCCCAT 59.436 52.381 0.00 0.00 39.75 4.00
537 538 0.988832 GGTCATCAGGTGTTACCCCA 59.011 55.000 0.00 0.00 39.75 4.96
538 539 0.988832 TGGTCATCAGGTGTTACCCC 59.011 55.000 0.00 0.00 39.75 4.95
539 540 3.016736 CAATGGTCATCAGGTGTTACCC 58.983 50.000 0.00 0.00 39.75 3.69
540 541 3.686016 ACAATGGTCATCAGGTGTTACC 58.314 45.455 0.00 0.00 38.99 2.85
541 542 5.527582 GGATACAATGGTCATCAGGTGTTAC 59.472 44.000 0.00 0.00 32.14 2.50
542 543 5.428457 AGGATACAATGGTCATCAGGTGTTA 59.572 40.000 0.00 0.00 41.41 2.41
543 544 4.228210 AGGATACAATGGTCATCAGGTGTT 59.772 41.667 0.00 0.00 41.41 3.32
544 545 3.782523 AGGATACAATGGTCATCAGGTGT 59.217 43.478 0.00 0.00 41.41 4.16
545 546 4.132336 CAGGATACAATGGTCATCAGGTG 58.868 47.826 0.00 0.00 41.41 4.00
546 547 3.137176 CCAGGATACAATGGTCATCAGGT 59.863 47.826 0.00 0.00 41.41 4.00
547 548 3.392285 TCCAGGATACAATGGTCATCAGG 59.608 47.826 0.00 0.00 37.84 3.86
548 549 4.694760 TCCAGGATACAATGGTCATCAG 57.305 45.455 0.00 0.00 37.84 2.90
549 550 5.449297 TTTCCAGGATACAATGGTCATCA 57.551 39.130 0.00 0.00 37.84 3.07
550 551 6.966534 ATTTTCCAGGATACAATGGTCATC 57.033 37.500 0.00 0.00 37.84 2.92
551 552 8.863086 CATTATTTTCCAGGATACAATGGTCAT 58.137 33.333 0.00 0.00 37.84 3.06
552 553 7.838696 ACATTATTTTCCAGGATACAATGGTCA 59.161 33.333 13.65 0.00 37.84 4.02
553 554 8.237811 ACATTATTTTCCAGGATACAATGGTC 57.762 34.615 13.65 0.00 37.84 4.02
554 555 9.881773 ATACATTATTTTCCAGGATACAATGGT 57.118 29.630 13.65 3.14 37.84 3.55
560 561 8.842358 TTCGGATACATTATTTTCCAGGATAC 57.158 34.615 0.00 0.00 0.00 2.24
564 565 7.801716 TTCTTCGGATACATTATTTTCCAGG 57.198 36.000 0.00 0.00 0.00 4.45
580 581 6.984474 GTCACACCAGATATAATTTCTTCGGA 59.016 38.462 0.00 0.00 0.00 4.55
599 600 1.011968 TTATCACGCTGCGGTCACAC 61.012 55.000 26.95 0.00 0.00 3.82
633 634 3.088194 TGACGACCGCTATAATTGTCC 57.912 47.619 0.00 0.00 0.00 4.02
653 654 2.930950 CAACACGGGGTGATTATGGAT 58.069 47.619 0.00 0.00 36.96 3.41
715 718 6.260936 CCCATCTAATTAATGAAGCGACAACT 59.739 38.462 8.38 0.00 0.00 3.16
722 725 5.940470 ACCGATCCCATCTAATTAATGAAGC 59.060 40.000 8.38 0.00 0.00 3.86
757 760 4.749323 CACATGGGTGCCACATCT 57.251 55.556 0.00 0.00 38.37 2.90
819 822 3.072330 GGTGTTTCAATTCAATTGGGGGT 59.928 43.478 10.30 0.00 40.61 4.95
820 823 3.072184 TGGTGTTTCAATTCAATTGGGGG 59.928 43.478 10.30 0.00 40.61 5.40
821 824 4.317488 CTGGTGTTTCAATTCAATTGGGG 58.683 43.478 10.30 0.00 40.61 4.96
822 825 3.747529 GCTGGTGTTTCAATTCAATTGGG 59.252 43.478 10.30 0.00 40.61 4.12
823 826 3.429543 CGCTGGTGTTTCAATTCAATTGG 59.570 43.478 10.30 0.00 40.61 3.16
824 827 3.120923 GCGCTGGTGTTTCAATTCAATTG 60.121 43.478 3.46 3.46 41.57 2.32
825 828 3.059166 GCGCTGGTGTTTCAATTCAATT 58.941 40.909 0.00 0.00 0.00 2.32
826 829 2.297033 AGCGCTGGTGTTTCAATTCAAT 59.703 40.909 10.39 0.00 0.00 2.57
827 830 1.680735 AGCGCTGGTGTTTCAATTCAA 59.319 42.857 10.39 0.00 0.00 2.69
828 831 1.001487 CAGCGCTGGTGTTTCAATTCA 60.001 47.619 29.88 0.00 0.00 2.57
829 832 1.689959 CAGCGCTGGTGTTTCAATTC 58.310 50.000 29.88 0.00 0.00 2.17
830 833 0.318955 GCAGCGCTGGTGTTTCAATT 60.319 50.000 36.47 0.00 33.19 2.32
831 834 1.286880 GCAGCGCTGGTGTTTCAAT 59.713 52.632 36.47 0.00 33.19 2.57
832 835 2.721231 GCAGCGCTGGTGTTTCAA 59.279 55.556 36.47 0.00 33.19 2.69
833 836 3.286751 GGCAGCGCTGGTGTTTCA 61.287 61.111 36.47 0.00 33.19 2.69
834 837 4.043200 GGGCAGCGCTGGTGTTTC 62.043 66.667 36.47 19.52 33.19 2.78
835 838 2.762969 TATGGGCAGCGCTGGTGTTT 62.763 55.000 36.47 0.00 33.19 2.83
836 839 2.762969 TTATGGGCAGCGCTGGTGTT 62.763 55.000 36.47 0.00 33.19 3.32
837 840 2.556840 ATTATGGGCAGCGCTGGTGT 62.557 55.000 36.47 0.00 33.19 4.16
838 841 1.386525 AATTATGGGCAGCGCTGGTG 61.387 55.000 36.47 15.33 0.00 4.17
939 942 3.148031 GAGGCGATGGGTACGGGTC 62.148 68.421 0.00 0.00 0.00 4.46
940 943 3.152400 GAGGCGATGGGTACGGGT 61.152 66.667 0.00 0.00 0.00 5.28
941 944 3.925090 GGAGGCGATGGGTACGGG 61.925 72.222 0.00 0.00 0.00 5.28
942 945 2.436087 GATGGAGGCGATGGGTACGG 62.436 65.000 0.00 0.00 0.00 4.02
943 946 1.006102 GATGGAGGCGATGGGTACG 60.006 63.158 0.00 0.00 0.00 3.67
947 950 1.825281 GAGGAGATGGAGGCGATGGG 61.825 65.000 0.00 0.00 0.00 4.00
959 962 4.080129 TGCTAGCCAAAGATTTGAGGAGAT 60.080 41.667 13.29 0.00 40.55 2.75
1083 1090 9.482627 AACTCTAAGAAACGATCCATATCAATC 57.517 33.333 0.00 0.00 31.93 2.67
1087 1094 9.279904 CGATAACTCTAAGAAACGATCCATATC 57.720 37.037 0.00 0.00 0.00 1.63
1091 1098 6.688637 TCGATAACTCTAAGAAACGATCCA 57.311 37.500 0.00 0.00 0.00 3.41
1092 1099 9.279904 CATATCGATAACTCTAAGAAACGATCC 57.720 37.037 9.61 0.00 39.36 3.36
1138 1165 3.983988 CCAGACCTACATCATCGATTTCG 59.016 47.826 0.00 0.00 41.45 3.46
1152 1185 1.704082 CCCAGACCTCCCAGACCTA 59.296 63.158 0.00 0.00 0.00 3.08
1243 1276 1.128188 ACAGACCCGGGAAGCTCTTT 61.128 55.000 32.02 9.88 0.00 2.52
1258 1291 1.371183 CCCGTGCTCCTTGAACAGA 59.629 57.895 0.00 0.00 0.00 3.41
1276 1309 4.492160 TCGCACCGCTCGATCACC 62.492 66.667 0.00 0.00 0.00 4.02
1345 1378 2.124570 ATCGCCCACAGCACCATC 60.125 61.111 0.00 0.00 44.04 3.51
1603 1658 0.626382 TCAGACTCGACCTCCTCCAT 59.374 55.000 0.00 0.00 0.00 3.41
1604 1659 0.626382 ATCAGACTCGACCTCCTCCA 59.374 55.000 0.00 0.00 0.00 3.86
1605 1660 1.028905 CATCAGACTCGACCTCCTCC 58.971 60.000 0.00 0.00 0.00 4.30
1606 1661 1.757682 ACATCAGACTCGACCTCCTC 58.242 55.000 0.00 0.00 0.00 3.71
1607 1662 2.645802 GTACATCAGACTCGACCTCCT 58.354 52.381 0.00 0.00 0.00 3.69
1608 1663 1.331138 CGTACATCAGACTCGACCTCC 59.669 57.143 0.00 0.00 0.00 4.30
1876 2017 2.038007 AGAGCCTCCTCGCTTCCA 59.962 61.111 0.00 0.00 43.05 3.53
2177 2321 0.320697 AAGAAGAAGACGAACCCCCG 59.679 55.000 0.00 0.00 0.00 5.73
2180 2324 3.327626 GGAAGAAGAAGAAGACGAACCC 58.672 50.000 0.00 0.00 0.00 4.11
2181 2325 2.987821 CGGAAGAAGAAGAAGACGAACC 59.012 50.000 0.00 0.00 0.00 3.62
2182 2326 2.987821 CCGGAAGAAGAAGAAGACGAAC 59.012 50.000 0.00 0.00 0.00 3.95
2183 2327 2.609737 GCCGGAAGAAGAAGAAGACGAA 60.610 50.000 5.05 0.00 0.00 3.85
2184 2328 1.067776 GCCGGAAGAAGAAGAAGACGA 60.068 52.381 5.05 0.00 0.00 4.20
2185 2329 1.351153 GCCGGAAGAAGAAGAAGACG 58.649 55.000 5.05 0.00 0.00 4.18
2186 2330 1.351153 CGCCGGAAGAAGAAGAAGAC 58.649 55.000 5.05 0.00 0.00 3.01
2195 2339 4.830765 CCATCGCCGCCGGAAGAA 62.831 66.667 7.68 0.00 34.56 2.52
2222 2366 2.088423 AGGAAGAAAAACACACGCACA 58.912 42.857 0.00 0.00 0.00 4.57
2341 2877 9.312904 TGGAAGAGAAAGATCCAAATGTTTAAT 57.687 29.630 0.00 0.00 40.19 1.40
2419 2956 3.711348 GCTGACACTATCCGCAGC 58.289 61.111 0.00 0.00 45.64 5.25
2437 2974 0.035534 TTGATCTTGGGCAGCGCTTA 60.036 50.000 7.50 0.00 0.00 3.09
2455 2992 2.034879 CGATGGGCTTGTCGCTGTT 61.035 57.895 0.00 0.00 39.13 3.16
2534 3071 9.445786 TTCAATCTTTCGTCAGTTACAAATTTC 57.554 29.630 0.00 0.00 0.00 2.17
2605 3142 5.774690 TCAATGGTCAGAAAATTGGCTTACT 59.225 36.000 6.51 0.00 33.14 2.24
2634 3185 6.381801 GGAATTCAACACGAATCTTGACAAT 58.618 36.000 7.93 0.00 43.83 2.71
2767 3332 8.956426 ACACAAATAGAAGAAAAAGACAGACAA 58.044 29.630 0.00 0.00 0.00 3.18
2781 3346 9.771915 AAAAACAAAAATGCACACAAATAGAAG 57.228 25.926 0.00 0.00 0.00 2.85
2784 3360 9.719279 ATGAAAAACAAAAATGCACACAAATAG 57.281 25.926 0.00 0.00 0.00 1.73
2828 3409 8.338072 TCTTGAAAACGCCCATATAGTAAAAA 57.662 30.769 0.00 0.00 0.00 1.94
2829 3410 7.925043 TCTTGAAAACGCCCATATAGTAAAA 57.075 32.000 0.00 0.00 0.00 1.52
2830 3411 7.012894 CCATCTTGAAAACGCCCATATAGTAAA 59.987 37.037 0.00 0.00 0.00 2.01
2831 3412 6.485313 CCATCTTGAAAACGCCCATATAGTAA 59.515 38.462 0.00 0.00 0.00 2.24
2832 3413 5.995282 CCATCTTGAAAACGCCCATATAGTA 59.005 40.000 0.00 0.00 0.00 1.82
2833 3414 4.821805 CCATCTTGAAAACGCCCATATAGT 59.178 41.667 0.00 0.00 0.00 2.12
2834 3415 4.216257 CCCATCTTGAAAACGCCCATATAG 59.784 45.833 0.00 0.00 0.00 1.31
2843 3424 2.878406 ACACTCACCCATCTTGAAAACG 59.122 45.455 0.00 0.00 0.00 3.60
2844 3425 6.385649 TTTACACTCACCCATCTTGAAAAC 57.614 37.500 0.00 0.00 0.00 2.43
2876 3457 5.727434 TGTATTTAGAAACGAAGGGAGTCC 58.273 41.667 0.00 0.00 0.00 3.85
2877 3458 6.872547 ACTTGTATTTAGAAACGAAGGGAGTC 59.127 38.462 0.00 0.00 0.00 3.36
2878 3459 6.766429 ACTTGTATTTAGAAACGAAGGGAGT 58.234 36.000 0.00 0.00 0.00 3.85
2879 3460 6.313164 GGACTTGTATTTAGAAACGAAGGGAG 59.687 42.308 0.00 0.00 0.00 4.30
2880 3461 6.013984 AGGACTTGTATTTAGAAACGAAGGGA 60.014 38.462 0.00 0.00 0.00 4.20
2881 3462 6.171213 AGGACTTGTATTTAGAAACGAAGGG 58.829 40.000 0.00 0.00 0.00 3.95
2882 3463 7.668525 AAGGACTTGTATTTAGAAACGAAGG 57.331 36.000 0.00 0.00 0.00 3.46
2885 3466 9.985730 TCTAAAAGGACTTGTATTTAGAAACGA 57.014 29.630 4.78 0.00 39.89 3.85
2897 3478 8.936864 CGTATTGAAATCTCTAAAAGGACTTGT 58.063 33.333 0.00 0.00 0.00 3.16
2898 3479 8.391106 CCGTATTGAAATCTCTAAAAGGACTTG 58.609 37.037 0.00 0.00 0.00 3.16
2899 3480 8.319146 TCCGTATTGAAATCTCTAAAAGGACTT 58.681 33.333 0.00 0.00 0.00 3.01
2900 3481 7.764901 GTCCGTATTGAAATCTCTAAAAGGACT 59.235 37.037 0.00 0.00 38.90 3.85
2901 3482 7.764901 AGTCCGTATTGAAATCTCTAAAAGGAC 59.235 37.037 0.00 0.00 41.35 3.85
2902 3483 7.848128 AGTCCGTATTGAAATCTCTAAAAGGA 58.152 34.615 0.00 0.00 0.00 3.36
2903 3484 9.032420 GTAGTCCGTATTGAAATCTCTAAAAGG 57.968 37.037 0.00 0.00 0.00 3.11
2904 3485 9.582431 TGTAGTCCGTATTGAAATCTCTAAAAG 57.418 33.333 0.00 0.00 0.00 2.27
2909 3490 9.078990 TCATATGTAGTCCGTATTGAAATCTCT 57.921 33.333 1.90 0.00 0.00 3.10
2910 3491 9.692749 TTCATATGTAGTCCGTATTGAAATCTC 57.307 33.333 1.90 0.00 0.00 2.75
2942 3523 9.469097 AGTGAATCTACACTCTAAACTATGTCT 57.531 33.333 0.00 0.00 46.36 3.41
2956 3537 7.829378 ACGGAGAAAATAAGTGAATCTACAC 57.171 36.000 0.00 0.00 40.60 2.90
2957 3538 9.529325 CATACGGAGAAAATAAGTGAATCTACA 57.471 33.333 0.00 0.00 0.00 2.74
2958 3539 9.745880 TCATACGGAGAAAATAAGTGAATCTAC 57.254 33.333 0.00 0.00 0.00 2.59
2960 3541 9.319143 CTTCATACGGAGAAAATAAGTGAATCT 57.681 33.333 0.00 0.00 0.00 2.40
2961 3542 9.099454 ACTTCATACGGAGAAAATAAGTGAATC 57.901 33.333 0.00 0.00 0.00 2.52
2962 3543 9.099454 GACTTCATACGGAGAAAATAAGTGAAT 57.901 33.333 0.00 0.00 0.00 2.57
2963 3544 7.548075 GGACTTCATACGGAGAAAATAAGTGAA 59.452 37.037 0.00 0.00 0.00 3.18
2964 3545 7.039882 GGACTTCATACGGAGAAAATAAGTGA 58.960 38.462 0.00 0.00 0.00 3.41
2965 3546 6.019801 CGGACTTCATACGGAGAAAATAAGTG 60.020 42.308 0.00 0.00 0.00 3.16
2966 3547 6.040878 CGGACTTCATACGGAGAAAATAAGT 58.959 40.000 0.00 0.00 0.00 2.24
2967 3548 5.050972 GCGGACTTCATACGGAGAAAATAAG 60.051 44.000 0.00 0.00 0.00 1.73
2968 3549 4.807304 GCGGACTTCATACGGAGAAAATAA 59.193 41.667 0.00 0.00 0.00 1.40
2969 3550 4.142116 TGCGGACTTCATACGGAGAAAATA 60.142 41.667 0.00 0.00 0.00 1.40
2970 3551 3.195661 GCGGACTTCATACGGAGAAAAT 58.804 45.455 0.00 0.00 0.00 1.82
2971 3552 2.028839 TGCGGACTTCATACGGAGAAAA 60.029 45.455 0.00 0.00 0.00 2.29
2972 3553 1.546923 TGCGGACTTCATACGGAGAAA 59.453 47.619 0.00 0.00 0.00 2.52
2973 3554 1.179152 TGCGGACTTCATACGGAGAA 58.821 50.000 0.00 0.00 0.00 2.87
2974 3555 1.399714 ATGCGGACTTCATACGGAGA 58.600 50.000 0.00 0.00 0.00 3.71
2975 3556 1.860950 CAATGCGGACTTCATACGGAG 59.139 52.381 0.00 0.00 0.00 4.63
2976 3557 1.478916 TCAATGCGGACTTCATACGGA 59.521 47.619 0.00 0.00 0.00 4.69
2977 3558 1.934589 TCAATGCGGACTTCATACGG 58.065 50.000 0.00 0.00 0.00 4.02
2978 3559 4.271049 AGATTTCAATGCGGACTTCATACG 59.729 41.667 0.00 0.00 0.00 3.06
2979 3560 5.525378 AGAGATTTCAATGCGGACTTCATAC 59.475 40.000 0.00 0.00 0.00 2.39
2980 3561 5.674525 AGAGATTTCAATGCGGACTTCATA 58.325 37.500 0.00 0.00 0.00 2.15
2981 3562 4.521146 AGAGATTTCAATGCGGACTTCAT 58.479 39.130 0.00 0.00 0.00 2.57
2982 3563 3.942829 AGAGATTTCAATGCGGACTTCA 58.057 40.909 0.00 0.00 0.00 3.02
2983 3564 6.422776 TTTAGAGATTTCAATGCGGACTTC 57.577 37.500 0.00 0.00 0.00 3.01
2984 3565 6.817765 TTTTAGAGATTTCAATGCGGACTT 57.182 33.333 0.00 0.00 0.00 3.01
2985 3566 6.623767 GCTTTTTAGAGATTTCAATGCGGACT 60.624 38.462 0.00 0.00 0.00 3.85
2986 3567 5.513141 GCTTTTTAGAGATTTCAATGCGGAC 59.487 40.000 0.00 0.00 0.00 4.79
2987 3568 5.393027 GGCTTTTTAGAGATTTCAATGCGGA 60.393 40.000 0.00 0.00 0.00 5.54
2988 3569 4.800471 GGCTTTTTAGAGATTTCAATGCGG 59.200 41.667 0.00 0.00 0.00 5.69
2989 3570 5.644644 AGGCTTTTTAGAGATTTCAATGCG 58.355 37.500 0.00 0.00 0.00 4.73
3004 3585 8.360390 GCAGTATGGCTAAATATAAGGCTTTTT 58.640 33.333 4.45 2.60 40.07 1.94
3005 3586 7.505585 TGCAGTATGGCTAAATATAAGGCTTTT 59.494 33.333 4.45 0.00 40.07 2.27
3006 3587 7.004086 TGCAGTATGGCTAAATATAAGGCTTT 58.996 34.615 4.45 0.00 40.07 3.51
3007 3588 6.542821 TGCAGTATGGCTAAATATAAGGCTT 58.457 36.000 4.58 4.58 40.07 4.35
3008 3589 6.126863 TGCAGTATGGCTAAATATAAGGCT 57.873 37.500 11.40 0.00 40.07 4.58
3009 3590 5.940470 ACTGCAGTATGGCTAAATATAAGGC 59.060 40.000 20.16 4.98 39.83 4.35
3010 3591 6.936900 ACACTGCAGTATGGCTAAATATAAGG 59.063 38.462 21.20 3.08 35.86 2.69
3011 3592 7.657354 TCACACTGCAGTATGGCTAAATATAAG 59.343 37.037 24.23 6.70 35.86 1.73
3012 3593 7.505258 TCACACTGCAGTATGGCTAAATATAA 58.495 34.615 24.23 0.00 35.86 0.98
3013 3594 7.061566 TCACACTGCAGTATGGCTAAATATA 57.938 36.000 24.23 0.00 35.86 0.86
3014 3595 5.928976 TCACACTGCAGTATGGCTAAATAT 58.071 37.500 24.23 0.00 35.86 1.28
3015 3596 5.351948 TCACACTGCAGTATGGCTAAATA 57.648 39.130 24.23 0.57 35.86 1.40
3016 3597 4.220693 TCACACTGCAGTATGGCTAAAT 57.779 40.909 24.23 0.00 35.86 1.40
3017 3598 3.694043 TCACACTGCAGTATGGCTAAA 57.306 42.857 24.23 2.13 35.86 1.85
3018 3599 3.694043 TTCACACTGCAGTATGGCTAA 57.306 42.857 24.23 9.33 35.86 3.09
3019 3600 3.694043 TTTCACACTGCAGTATGGCTA 57.306 42.857 24.23 8.19 35.86 3.93
3020 3601 2.566833 TTTCACACTGCAGTATGGCT 57.433 45.000 24.23 0.00 35.86 4.75
3021 3602 3.855689 ATTTTCACACTGCAGTATGGC 57.144 42.857 24.23 0.00 35.86 4.40
3022 3603 3.922240 GCAATTTTCACACTGCAGTATGG 59.078 43.478 24.23 12.90 35.86 2.74
3023 3604 4.383649 GTGCAATTTTCACACTGCAGTATG 59.616 41.667 21.20 20.15 44.93 2.39
3024 3605 4.279169 AGTGCAATTTTCACACTGCAGTAT 59.721 37.500 21.20 5.00 44.53 2.12
3025 3606 3.631686 AGTGCAATTTTCACACTGCAGTA 59.368 39.130 21.20 2.52 44.53 2.74
3026 3607 2.428171 AGTGCAATTTTCACACTGCAGT 59.572 40.909 15.25 15.25 44.93 4.40
3027 3608 3.088194 AGTGCAATTTTCACACTGCAG 57.912 42.857 13.48 13.48 44.93 4.41
3028 3609 4.852134 ATAGTGCAATTTTCACACTGCA 57.148 36.364 5.19 0.00 44.12 4.41
3029 3610 8.961092 CATATAATAGTGCAATTTTCACACTGC 58.039 33.333 5.19 0.00 44.12 4.40
3041 3622 9.796120 GCAAAAGGTAAACATATAATAGTGCAA 57.204 29.630 0.00 0.00 0.00 4.08
3042 3623 8.961634 TGCAAAAGGTAAACATATAATAGTGCA 58.038 29.630 0.00 0.00 32.78 4.57
3043 3624 9.796120 TTGCAAAAGGTAAACATATAATAGTGC 57.204 29.630 0.00 0.00 0.00 4.40
3060 3641 6.116680 TGCACTTTTTGTAATTGCAAAAGG 57.883 33.333 29.29 29.29 45.38 3.11
3065 3646 8.333908 CAGTAAATTGCACTTTTTGTAATTGCA 58.666 29.630 7.39 0.00 46.39 4.08
3066 3647 7.321034 GCAGTAAATTGCACTTTTTGTAATTGC 59.679 33.333 7.39 4.51 46.39 3.56
3067 3648 8.333908 TGCAGTAAATTGCACTTTTTGTAATTG 58.666 29.630 7.39 0.00 46.39 2.32
3081 3662 3.628017 ACACGACTTTGCAGTAAATTGC 58.372 40.909 0.00 0.00 44.33 3.56
3082 3663 5.743467 TGTACACGACTTTGCAGTAAATTG 58.257 37.500 0.00 0.00 31.22 2.32
3083 3664 5.994887 TGTACACGACTTTGCAGTAAATT 57.005 34.783 0.00 0.00 31.22 1.82
3084 3665 5.756347 TCTTGTACACGACTTTGCAGTAAAT 59.244 36.000 0.00 0.00 31.22 1.40
3085 3666 5.110598 TCTTGTACACGACTTTGCAGTAAA 58.889 37.500 0.00 0.00 31.22 2.01
3086 3667 4.684877 TCTTGTACACGACTTTGCAGTAA 58.315 39.130 0.00 0.00 31.22 2.24
3087 3668 4.310357 TCTTGTACACGACTTTGCAGTA 57.690 40.909 0.00 0.00 31.22 2.74
3088 3669 3.173668 TCTTGTACACGACTTTGCAGT 57.826 42.857 0.00 0.00 35.17 4.40
3089 3670 4.732285 AATCTTGTACACGACTTTGCAG 57.268 40.909 3.89 0.00 0.00 4.41
3090 3671 6.795098 AATAATCTTGTACACGACTTTGCA 57.205 33.333 3.89 0.00 0.00 4.08
3091 3672 8.502161 AAAAATAATCTTGTACACGACTTTGC 57.498 30.769 3.89 0.00 0.00 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.