Multiple sequence alignment - TraesCS1D01G239600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G239600 chr1D 100.000 3590 0 0 1 3590 329499138 329502727 0.000000e+00 6630.0
1 TraesCS1D01G239600 chr1A 94.482 2193 81 18 894 3081 426728748 426730905 0.000000e+00 3343.0
2 TraesCS1D01G239600 chr1A 85.379 383 50 6 144 523 426726980 426727359 3.360000e-105 392.0
3 TraesCS1D01G239600 chr1A 86.792 159 12 4 548 699 426727445 426727601 6.160000e-38 169.0
4 TraesCS1D01G239600 chr1A 90.698 86 8 0 49 134 426677443 426677528 8.140000e-22 115.0
5 TraesCS1D01G239600 chr1B 96.647 1849 53 1 832 2671 444344336 444346184 0.000000e+00 3062.0
6 TraesCS1D01G239600 chr1B 86.261 444 56 5 107 547 444324361 444324802 9.020000e-131 477.0
7 TraesCS1D01G239600 chr1B 90.000 300 26 2 2789 3084 444347151 444347450 5.620000e-103 385.0
8 TraesCS1D01G239600 chr1B 89.960 249 24 1 3122 3370 444348680 444348927 1.610000e-83 320.0
9 TraesCS1D01G239600 chr1B 90.187 214 19 2 3374 3586 444361266 444361478 9.820000e-71 278.0
10 TraesCS1D01G239600 chr1B 88.387 155 11 3 548 699 444344166 444344316 2.850000e-41 180.0
11 TraesCS1D01G239600 chr1B 97.436 39 0 1 3319 3357 2358360 2358323 8.320000e-07 65.8
12 TraesCS1D01G239600 chr7B 83.193 476 66 13 82 550 24122504 24122972 1.190000e-114 424.0
13 TraesCS1D01G239600 chr7B 82.493 377 66 0 1782 2158 5260709 5260333 7.430000e-87 331.0
14 TraesCS1D01G239600 chr7B 81.720 372 68 0 1782 2153 41290005 41289634 9.680000e-81 311.0
15 TraesCS1D01G239600 chr4D 82.664 473 69 10 82 550 54382489 54382026 1.200000e-109 407.0
16 TraesCS1D01G239600 chr4D 79.524 210 27 11 3312 3514 193516610 193516810 6.250000e-28 135.0
17 TraesCS1D01G239600 chr4D 77.124 153 24 9 2854 2997 464863821 464863971 1.070000e-10 78.7
18 TraesCS1D01G239600 chr3B 83.024 377 64 0 1782 2158 765862683 765863059 3.430000e-90 342.0
19 TraesCS1D01G239600 chr3B 82.228 377 67 0 1782 2158 66467499 66467123 3.460000e-85 326.0
20 TraesCS1D01G239600 chr3B 81.698 377 69 0 1782 2158 807677943 807677567 7.480000e-82 315.0
21 TraesCS1D01G239600 chr3B 80.976 205 29 7 3312 3515 32280533 32280728 1.730000e-33 154.0
22 TraesCS1D01G239600 chr3B 78.818 203 33 7 3313 3514 650362557 650362750 1.050000e-25 128.0
23 TraesCS1D01G239600 chr3B 82.432 148 15 9 3320 3466 794362331 794362194 6.300000e-23 119.0
24 TraesCS1D01G239600 chr4B 81.102 381 63 8 66 443 470723214 470722840 2.710000e-76 296.0
25 TraesCS1D01G239600 chr4B 88.333 240 26 2 3088 3325 183524986 183525225 1.630000e-73 287.0
26 TraesCS1D01G239600 chr4B 100.000 28 0 0 3060 3087 579333978 579333951 6.000000e-03 52.8
27 TraesCS1D01G239600 chr7D 87.200 250 28 4 3079 3325 627700294 627700542 7.590000e-72 281.0
28 TraesCS1D01G239600 chr7D 86.747 249 30 3 3079 3325 627814978 627815225 1.270000e-69 274.0
29 TraesCS1D01G239600 chr7D 86.454 251 29 5 3079 3325 627876165 627876414 1.640000e-68 270.0
30 TraesCS1D01G239600 chr7D 86.400 250 30 4 3079 3325 627965260 627965508 1.640000e-68 270.0
31 TraesCS1D01G239600 chr7D 86.056 251 30 4 3079 3325 627759793 627760042 7.640000e-67 265.0
32 TraesCS1D01G239600 chr7D 86.111 252 27 8 3079 3325 628050337 628050585 7.640000e-67 265.0
33 TraesCS1D01G239600 chr7D 81.046 153 19 5 3312 3463 92796430 92796573 2.930000e-21 113.0
34 TraesCS1D01G239600 chr2B 86.475 244 30 3 3088 3329 449827085 449826843 7.640000e-67 265.0
35 TraesCS1D01G239600 chr2B 100.000 31 0 0 2698 2728 546987541 546987571 1.390000e-04 58.4
36 TraesCS1D01G239600 chr2D 81.443 194 26 7 3320 3512 152029100 152028916 2.230000e-32 150.0
37 TraesCS1D01G239600 chr2D 78.443 167 23 9 3312 3476 245406372 245406527 2.950000e-16 97.1
38 TraesCS1D01G239600 chr2D 94.737 38 0 2 3060 3095 587208905 587208942 1.390000e-04 58.4
39 TraesCS1D01G239600 chr3A 79.902 204 31 7 3312 3514 630932461 630932655 1.340000e-29 141.0
40 TraesCS1D01G239600 chr5D 81.579 152 20 6 3312 3463 396819025 396819168 6.300000e-23 119.0
41 TraesCS1D01G239600 chr7A 76.652 227 38 9 2380 2595 106729519 106729741 1.050000e-20 111.0
42 TraesCS1D01G239600 chr7A 77.344 128 24 5 2854 2980 586930924 586931047 1.790000e-08 71.3
43 TraesCS1D01G239600 chr4A 94.545 55 3 0 563 617 157212375 157212429 6.390000e-13 86.1
44 TraesCS1D01G239600 chr6D 97.297 37 1 0 2699 2735 263008820 263008784 2.990000e-06 63.9
45 TraesCS1D01G239600 chr6A 97.297 37 1 0 2699 2735 358150981 358150945 2.990000e-06 63.9
46 TraesCS1D01G239600 chr6A 92.308 39 3 0 2654 2692 533468025 533468063 5.010000e-04 56.5
47 TraesCS1D01G239600 chr2A 100.000 31 0 0 2698 2728 608647328 608647358 1.390000e-04 58.4
48 TraesCS1D01G239600 chr5B 94.595 37 0 1 3055 3089 221899853 221899817 5.010000e-04 56.5
49 TraesCS1D01G239600 chr5A 100.000 30 0 0 2663 2692 1720880 1720851 5.010000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G239600 chr1D 329499138 329502727 3589 False 6630.000000 6630 100.000000 1 3590 1 chr1D.!!$F1 3589
1 TraesCS1D01G239600 chr1A 426726980 426730905 3925 False 1301.333333 3343 88.884333 144 3081 3 chr1A.!!$F2 2937
2 TraesCS1D01G239600 chr1B 444344166 444348927 4761 False 986.750000 3062 91.248500 548 3370 4 chr1B.!!$F3 2822

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
664 730 0.033796 ATCCCTTGTCACAGGCCATG 60.034 55.0 5.01 2.37 31.69 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2627 3790 0.17899 ACAAACCCAGAAGTCCAGCC 60.179 55.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.907866 AAGGGTTCGTTTGAAAGAGAAAA 57.092 34.783 0.00 0.00 35.46 2.29
23 24 5.907866 AGGGTTCGTTTGAAAGAGAAAAA 57.092 34.783 0.00 0.00 35.46 1.94
41 42 3.434940 AAAACTCGCAGGATTACCCTT 57.565 42.857 0.00 0.00 44.85 3.95
42 43 3.434940 AAACTCGCAGGATTACCCTTT 57.565 42.857 0.00 0.00 44.85 3.11
43 44 3.434940 AACTCGCAGGATTACCCTTTT 57.565 42.857 0.00 0.00 44.85 2.27
44 45 3.434940 ACTCGCAGGATTACCCTTTTT 57.565 42.857 0.00 0.00 44.85 1.94
77 78 8.537728 AAGGGCACTTTATTGAATCATAATGA 57.462 30.769 0.00 0.00 31.39 2.57
78 79 8.537728 AGGGCACTTTATTGAATCATAATGAA 57.462 30.769 0.00 0.00 0.00 2.57
79 80 8.636213 AGGGCACTTTATTGAATCATAATGAAG 58.364 33.333 0.00 0.00 37.24 3.02
80 81 7.383300 GGGCACTTTATTGAATCATAATGAAGC 59.617 37.037 0.00 0.00 35.65 3.86
81 82 7.922278 GGCACTTTATTGAATCATAATGAAGCA 59.078 33.333 0.00 0.00 35.65 3.91
82 83 9.472361 GCACTTTATTGAATCATAATGAAGCAT 57.528 29.630 0.00 0.00 35.65 3.79
102 103 9.162793 GAAGCATACAATCATAATGAAGAAACG 57.837 33.333 0.00 0.00 0.00 3.60
103 104 7.134815 AGCATACAATCATAATGAAGAAACGC 58.865 34.615 0.00 0.00 0.00 4.84
104 105 7.012704 AGCATACAATCATAATGAAGAAACGCT 59.987 33.333 0.00 0.00 0.00 5.07
105 106 7.322222 GCATACAATCATAATGAAGAAACGCTC 59.678 37.037 0.00 0.00 0.00 5.03
106 107 5.799960 ACAATCATAATGAAGAAACGCTCG 58.200 37.500 0.00 0.00 0.00 5.03
107 108 5.580691 ACAATCATAATGAAGAAACGCTCGA 59.419 36.000 0.00 0.00 0.00 4.04
108 109 5.643339 ATCATAATGAAGAAACGCTCGAC 57.357 39.130 0.00 0.00 0.00 4.20
109 110 3.863424 TCATAATGAAGAAACGCTCGACC 59.137 43.478 0.00 0.00 0.00 4.79
110 111 2.457366 AATGAAGAAACGCTCGACCT 57.543 45.000 0.00 0.00 0.00 3.85
111 112 1.997669 ATGAAGAAACGCTCGACCTC 58.002 50.000 0.00 0.00 0.00 3.85
112 113 0.959553 TGAAGAAACGCTCGACCTCT 59.040 50.000 0.00 0.00 0.00 3.69
113 114 1.335964 TGAAGAAACGCTCGACCTCTG 60.336 52.381 0.00 0.00 0.00 3.35
114 115 0.959553 AAGAAACGCTCGACCTCTGA 59.040 50.000 0.00 0.00 0.00 3.27
115 116 0.959553 AGAAACGCTCGACCTCTGAA 59.040 50.000 0.00 0.00 0.00 3.02
116 117 1.546476 AGAAACGCTCGACCTCTGAAT 59.454 47.619 0.00 0.00 0.00 2.57
117 118 2.753452 AGAAACGCTCGACCTCTGAATA 59.247 45.455 0.00 0.00 0.00 1.75
118 119 2.853731 AACGCTCGACCTCTGAATAG 57.146 50.000 0.00 0.00 0.00 1.73
119 120 1.752683 ACGCTCGACCTCTGAATAGT 58.247 50.000 0.00 0.00 0.00 2.12
120 121 2.093106 ACGCTCGACCTCTGAATAGTT 58.907 47.619 0.00 0.00 0.00 2.24
121 122 3.276857 ACGCTCGACCTCTGAATAGTTA 58.723 45.455 0.00 0.00 0.00 2.24
122 123 3.693085 ACGCTCGACCTCTGAATAGTTAA 59.307 43.478 0.00 0.00 0.00 2.01
123 124 4.201930 ACGCTCGACCTCTGAATAGTTAAG 60.202 45.833 0.00 0.00 0.00 1.85
124 125 4.035324 CGCTCGACCTCTGAATAGTTAAGA 59.965 45.833 0.00 0.00 0.00 2.10
125 126 5.278071 CGCTCGACCTCTGAATAGTTAAGAT 60.278 44.000 0.00 0.00 0.00 2.40
126 127 6.073167 CGCTCGACCTCTGAATAGTTAAGATA 60.073 42.308 0.00 0.00 0.00 1.98
127 128 7.079475 GCTCGACCTCTGAATAGTTAAGATAC 58.921 42.308 0.00 0.00 0.00 2.24
128 129 7.255173 GCTCGACCTCTGAATAGTTAAGATACA 60.255 40.741 0.00 0.00 0.00 2.29
129 130 8.693120 TCGACCTCTGAATAGTTAAGATACAT 57.307 34.615 0.00 0.00 0.00 2.29
130 131 9.788889 TCGACCTCTGAATAGTTAAGATACATA 57.211 33.333 0.00 0.00 0.00 2.29
201 202 2.789409 AAAGACGGAAGCTATGCCTT 57.211 45.000 0.00 0.00 0.00 4.35
251 252 1.517276 GCGATCAAACACCGATAGACG 59.483 52.381 0.00 0.00 42.18 4.18
263 264 6.204359 ACACCGATAGACGATATACAACAAC 58.796 40.000 0.00 0.00 45.77 3.32
271 272 3.802139 ACGATATACAACAACGAGCATGG 59.198 43.478 0.00 0.00 0.00 3.66
301 302 7.064609 CCAACTATCACTTGACAACATAACGAT 59.935 37.037 0.00 0.00 0.00 3.73
302 303 7.757097 ACTATCACTTGACAACATAACGATC 57.243 36.000 0.00 0.00 0.00 3.69
314 315 7.234384 ACAACATAACGATCACGAAAAGATTC 58.766 34.615 0.00 0.00 42.66 2.52
331 332 5.757850 AGATTCTTCAAAAGCAACGTCTT 57.242 34.783 0.00 0.00 0.00 3.01
332 333 5.752712 AGATTCTTCAAAAGCAACGTCTTC 58.247 37.500 0.00 0.00 0.00 2.87
335 336 5.303747 TCTTCAAAAGCAACGTCTTCAAA 57.696 34.783 0.00 0.00 0.00 2.69
336 337 5.331902 TCTTCAAAAGCAACGTCTTCAAAG 58.668 37.500 0.00 0.00 0.00 2.77
340 341 5.799936 TCAAAAGCAACGTCTTCAAAGAAAG 59.200 36.000 0.00 0.00 36.68 2.62
358 359 2.512745 AACGACACACAAGCGCCA 60.513 55.556 2.29 0.00 0.00 5.69
360 361 3.268603 CGACACACAAGCGCCACA 61.269 61.111 2.29 0.00 0.00 4.17
365 366 1.891919 ACACAAGCGCCACAATCGT 60.892 52.632 2.29 0.00 0.00 3.73
366 367 1.154413 CACAAGCGCCACAATCGTC 60.154 57.895 2.29 0.00 0.00 4.20
380 381 3.007940 ACAATCGTCAGATCCAACCTTCA 59.992 43.478 0.00 0.00 35.74 3.02
384 385 4.065088 TCGTCAGATCCAACCTTCAAAAG 58.935 43.478 0.00 0.00 0.00 2.27
385 386 3.365364 CGTCAGATCCAACCTTCAAAAGC 60.365 47.826 0.00 0.00 0.00 3.51
407 408 3.944015 CCAGATCATGAGTTTTCACCCTC 59.056 47.826 0.09 0.00 35.83 4.30
409 410 5.005740 CAGATCATGAGTTTTCACCCTCAA 58.994 41.667 0.09 0.00 40.81 3.02
418 419 4.580580 AGTTTTCACCCTCAAGTTCATGTC 59.419 41.667 0.00 0.00 0.00 3.06
420 421 2.054021 TCACCCTCAAGTTCATGTCCA 58.946 47.619 0.00 0.00 0.00 4.02
423 424 1.815003 CCCTCAAGTTCATGTCCAAGC 59.185 52.381 0.00 0.00 0.00 4.01
429 430 4.402155 TCAAGTTCATGTCCAAGCAAACTT 59.598 37.500 0.00 0.00 37.41 2.66
446 447 7.444299 AGCAAACTTGAAACAATACCATCAAT 58.556 30.769 0.00 0.00 31.92 2.57
472 473 0.385473 ACAACGCAAAATCTTCGCCG 60.385 50.000 0.00 0.00 0.00 6.46
475 476 0.385473 ACGCAAAATCTTCGCCGTTG 60.385 50.000 0.00 0.00 0.00 4.10
480 481 0.240945 AAATCTTCGCCGTTGCAAGG 59.759 50.000 12.17 12.17 37.32 3.61
486 487 1.361793 TCGCCGTTGCAAGGTATAAC 58.638 50.000 17.23 0.00 37.32 1.89
489 490 1.813786 GCCGTTGCAAGGTATAACCAA 59.186 47.619 17.23 0.00 37.94 3.67
495 496 5.493809 GTTGCAAGGTATAACCAAGTAGGA 58.506 41.667 0.00 0.00 41.95 2.94
496 497 5.093849 TGCAAGGTATAACCAAGTAGGAC 57.906 43.478 0.00 0.00 41.95 3.85
499 500 5.572066 GCAAGGTATAACCAAGTAGGACCAA 60.572 44.000 0.00 0.00 41.95 3.67
505 506 1.423921 ACCAAGTAGGACCAAACCTGG 59.576 52.381 11.35 11.35 44.62 4.45
523 525 2.046217 GGTTTCACCCCGGAGCTC 60.046 66.667 0.73 4.71 30.04 4.09
524 526 2.747686 GTTTCACCCCGGAGCTCA 59.252 61.111 17.19 0.00 0.00 4.26
529 531 2.203788 ACCCCGGAGCTCAAGACA 60.204 61.111 17.19 0.00 0.00 3.41
530 532 1.841556 ACCCCGGAGCTCAAGACAA 60.842 57.895 17.19 0.00 0.00 3.18
531 533 1.376037 CCCCGGAGCTCAAGACAAC 60.376 63.158 17.19 0.00 0.00 3.32
532 534 1.738099 CCCGGAGCTCAAGACAACG 60.738 63.158 17.19 7.68 0.00 4.10
535 537 1.337821 CGGAGCTCAAGACAACGTAC 58.662 55.000 17.19 0.00 0.00 3.67
538 540 2.229302 GGAGCTCAAGACAACGTACTCT 59.771 50.000 17.19 0.00 0.00 3.24
546 548 4.422546 AGACAACGTACTCTAGAAGCAC 57.577 45.455 0.00 0.00 0.00 4.40
575 641 3.426836 ATCCCAGCAGCAGCCCAT 61.427 61.111 0.00 0.00 43.56 4.00
587 653 3.788766 GCCCATCGTCGCACACAC 61.789 66.667 0.00 0.00 0.00 3.82
618 684 3.281727 TTGATGAGGGAGGAATTTCCG 57.718 47.619 9.77 0.00 42.75 4.30
648 714 1.728971 CCGAGATATTTCAGCGCATCC 59.271 52.381 11.47 0.00 0.00 3.51
664 730 0.033796 ATCCCTTGTCACAGGCCATG 60.034 55.000 5.01 2.37 31.69 3.66
669 735 1.106351 TTGTCACAGGCCATGCGTTT 61.106 50.000 5.01 0.00 0.00 3.60
699 772 1.557371 TGAGAATTGTCACCGGCCATA 59.443 47.619 0.00 0.00 0.00 2.74
701 774 1.559682 AGAATTGTCACCGGCCATACT 59.440 47.619 0.00 0.00 0.00 2.12
702 775 2.026262 AGAATTGTCACCGGCCATACTT 60.026 45.455 0.00 0.00 0.00 2.24
703 776 2.507407 ATTGTCACCGGCCATACTTT 57.493 45.000 0.00 0.00 0.00 2.66
704 777 2.279935 TTGTCACCGGCCATACTTTT 57.720 45.000 0.00 0.00 0.00 2.27
705 778 2.279935 TGTCACCGGCCATACTTTTT 57.720 45.000 0.00 0.00 0.00 1.94
730 803 7.455641 TTTTGAACTTACTGACAAGGTTTGA 57.544 32.000 0.00 0.00 0.00 2.69
731 804 7.639113 TTTGAACTTACTGACAAGGTTTGAT 57.361 32.000 0.00 0.00 0.00 2.57
732 805 6.618287 TGAACTTACTGACAAGGTTTGATG 57.382 37.500 0.00 0.00 0.00 3.07
733 806 6.119536 TGAACTTACTGACAAGGTTTGATGT 58.880 36.000 0.00 0.00 0.00 3.06
734 807 6.260050 TGAACTTACTGACAAGGTTTGATGTC 59.740 38.462 0.00 0.00 44.84 3.06
735 808 4.750098 ACTTACTGACAAGGTTTGATGTCG 59.250 41.667 0.00 0.00 46.99 4.35
736 809 3.469008 ACTGACAAGGTTTGATGTCGA 57.531 42.857 0.00 0.00 46.99 4.20
737 810 3.131396 ACTGACAAGGTTTGATGTCGAC 58.869 45.455 9.11 9.11 46.99 4.20
738 811 3.181465 ACTGACAAGGTTTGATGTCGACT 60.181 43.478 17.92 1.84 46.99 4.18
739 812 3.130633 TGACAAGGTTTGATGTCGACTG 58.869 45.455 17.92 5.62 46.99 3.51
740 813 2.480419 GACAAGGTTTGATGTCGACTGG 59.520 50.000 17.92 0.00 36.89 4.00
741 814 2.104111 ACAAGGTTTGATGTCGACTGGA 59.896 45.455 17.92 0.00 0.00 3.86
742 815 3.138304 CAAGGTTTGATGTCGACTGGAA 58.862 45.455 17.92 3.43 0.00 3.53
743 816 3.485463 AGGTTTGATGTCGACTGGAAA 57.515 42.857 17.92 9.40 0.00 3.13
744 817 4.021102 AGGTTTGATGTCGACTGGAAAT 57.979 40.909 17.92 0.40 0.00 2.17
745 818 4.398319 AGGTTTGATGTCGACTGGAAATT 58.602 39.130 17.92 3.31 0.00 1.82
746 819 5.556915 AGGTTTGATGTCGACTGGAAATTA 58.443 37.500 17.92 0.00 0.00 1.40
747 820 6.001460 AGGTTTGATGTCGACTGGAAATTAA 58.999 36.000 17.92 1.60 0.00 1.40
748 821 6.072673 AGGTTTGATGTCGACTGGAAATTAAC 60.073 38.462 17.92 9.37 0.00 2.01
749 822 5.873179 TTGATGTCGACTGGAAATTAACC 57.127 39.130 17.92 0.00 0.00 2.85
750 823 5.160607 TGATGTCGACTGGAAATTAACCT 57.839 39.130 17.92 0.00 0.00 3.50
751 824 5.556915 TGATGTCGACTGGAAATTAACCTT 58.443 37.500 17.92 0.00 0.00 3.50
752 825 6.703319 TGATGTCGACTGGAAATTAACCTTA 58.297 36.000 17.92 0.00 0.00 2.69
753 826 7.162761 TGATGTCGACTGGAAATTAACCTTAA 58.837 34.615 17.92 0.00 0.00 1.85
754 827 6.790285 TGTCGACTGGAAATTAACCTTAAC 57.210 37.500 17.92 0.00 0.00 2.01
755 828 5.702209 TGTCGACTGGAAATTAACCTTAACC 59.298 40.000 17.92 0.00 0.00 2.85
756 829 5.702209 GTCGACTGGAAATTAACCTTAACCA 59.298 40.000 8.70 0.00 0.00 3.67
757 830 6.373495 GTCGACTGGAAATTAACCTTAACCAT 59.627 38.462 8.70 0.00 0.00 3.55
758 831 6.373216 TCGACTGGAAATTAACCTTAACCATG 59.627 38.462 0.00 0.00 0.00 3.66
759 832 6.404293 CGACTGGAAATTAACCTTAACCATGG 60.404 42.308 11.19 11.19 0.00 3.66
760 833 6.319715 ACTGGAAATTAACCTTAACCATGGT 58.680 36.000 13.00 13.00 38.35 3.55
761 834 7.471890 ACTGGAAATTAACCTTAACCATGGTA 58.528 34.615 20.12 1.72 35.17 3.25
762 835 8.119891 ACTGGAAATTAACCTTAACCATGGTAT 58.880 33.333 20.12 11.13 35.17 2.73
763 836 8.903059 TGGAAATTAACCTTAACCATGGTATT 57.097 30.769 20.12 8.65 35.17 1.89
764 837 9.327731 TGGAAATTAACCTTAACCATGGTATTT 57.672 29.630 20.12 16.84 35.17 1.40
771 844 6.801575 ACCTTAACCATGGTATTTAATTGCG 58.198 36.000 20.12 1.70 34.36 4.85
772 845 6.378848 ACCTTAACCATGGTATTTAATTGCGT 59.621 34.615 20.12 0.00 34.36 5.24
773 846 7.556996 ACCTTAACCATGGTATTTAATTGCGTA 59.443 33.333 20.12 0.00 34.36 4.42
774 847 8.573035 CCTTAACCATGGTATTTAATTGCGTAT 58.427 33.333 20.12 0.00 0.00 3.06
775 848 9.959749 CTTAACCATGGTATTTAATTGCGTATT 57.040 29.630 20.12 0.00 0.00 1.89
776 849 9.737427 TTAACCATGGTATTTAATTGCGTATTG 57.263 29.630 20.12 0.00 0.00 1.90
777 850 7.341445 ACCATGGTATTTAATTGCGTATTGT 57.659 32.000 18.10 0.00 0.00 2.71
778 851 7.199766 ACCATGGTATTTAATTGCGTATTGTG 58.800 34.615 18.10 0.00 0.00 3.33
779 852 6.143758 CCATGGTATTTAATTGCGTATTGTGC 59.856 38.462 2.57 0.00 0.00 4.57
780 853 6.196079 TGGTATTTAATTGCGTATTGTGCA 57.804 33.333 0.00 0.00 41.38 4.57
785 858 3.415237 TTGCGTATTGTGCAATGCC 57.585 47.368 1.53 0.00 46.62 4.40
786 859 0.455802 TTGCGTATTGTGCAATGCCG 60.456 50.000 1.53 10.00 46.62 5.69
787 860 2.223549 GCGTATTGTGCAATGCCGC 61.224 57.895 19.67 19.67 41.50 6.53
788 861 1.933997 CGTATTGTGCAATGCCGCG 60.934 57.895 1.53 0.00 30.99 6.46
789 862 2.101965 TATTGTGCAATGCCGCGC 59.898 55.556 1.53 0.00 42.81 6.86
793 866 3.249605 GTGCAATGCCGCGCAATC 61.250 61.111 8.75 0.00 43.62 2.67
794 867 4.495336 TGCAATGCCGCGCAATCC 62.495 61.111 8.75 0.00 43.62 3.01
796 869 4.178214 CAATGCCGCGCAATCCGT 62.178 61.111 8.75 0.00 43.62 4.69
797 870 3.876198 AATGCCGCGCAATCCGTC 61.876 61.111 8.75 0.00 43.62 4.79
803 876 4.299316 GCGCAATCCGTCGCCATC 62.299 66.667 0.30 0.00 45.01 3.51
804 877 2.586079 CGCAATCCGTCGCCATCT 60.586 61.111 0.00 0.00 0.00 2.90
805 878 2.173669 CGCAATCCGTCGCCATCTT 61.174 57.895 0.00 0.00 0.00 2.40
806 879 0.874175 CGCAATCCGTCGCCATCTTA 60.874 55.000 0.00 0.00 0.00 2.10
807 880 0.582005 GCAATCCGTCGCCATCTTAC 59.418 55.000 0.00 0.00 0.00 2.34
808 881 1.217882 CAATCCGTCGCCATCTTACC 58.782 55.000 0.00 0.00 0.00 2.85
809 882 0.106149 AATCCGTCGCCATCTTACCC 59.894 55.000 0.00 0.00 0.00 3.69
810 883 1.046472 ATCCGTCGCCATCTTACCCA 61.046 55.000 0.00 0.00 0.00 4.51
811 884 1.046472 TCCGTCGCCATCTTACCCAT 61.046 55.000 0.00 0.00 0.00 4.00
812 885 0.179056 CCGTCGCCATCTTACCCATT 60.179 55.000 0.00 0.00 0.00 3.16
813 886 0.937304 CGTCGCCATCTTACCCATTG 59.063 55.000 0.00 0.00 0.00 2.82
814 887 1.308998 GTCGCCATCTTACCCATTGG 58.691 55.000 0.00 0.00 37.80 3.16
877 2018 7.461026 GCGGCGAGAAAATAAAATAAAACAGTC 60.461 37.037 12.98 0.00 0.00 3.51
889 2043 7.867445 AAATAAAACAGTCGCACCATAAAAG 57.133 32.000 0.00 0.00 0.00 2.27
960 2114 3.756069 CGTAGCAGTAAAAGTAGCGACT 58.244 45.455 0.00 0.00 37.59 4.18
1014 2168 1.813092 GCAACCATGGAGATCTCGCAT 60.813 52.381 21.47 16.50 0.00 4.73
1461 2624 2.562912 GACGTCCTCGCCGTACAA 59.437 61.111 3.51 0.00 38.92 2.41
1780 2943 3.583276 GACGACCACGCCATGTCCA 62.583 63.158 0.00 0.00 43.96 4.02
1813 2976 0.390472 GGAGGTGAGCCAGAGAAACG 60.390 60.000 0.00 0.00 37.19 3.60
2562 3725 0.107410 ACAAGTCTTCGTTGGCCACA 60.107 50.000 3.88 0.00 0.00 4.17
2619 3782 3.317608 GCACATCAAATGCGACCAG 57.682 52.632 0.00 0.00 32.45 4.00
2627 3790 4.850859 TCAAATGCGACCAGTAATTACG 57.149 40.909 9.91 5.41 0.00 3.18
2724 4774 7.442656 ACGTCTTATATTTAGGAATGGAGGTG 58.557 38.462 0.00 0.00 0.00 4.00
2729 4779 6.704056 ATATTTAGGAATGGAGGTGGTAGG 57.296 41.667 0.00 0.00 0.00 3.18
2742 4792 4.290942 AGGTGGTAGGAGATTGAAGTAGG 58.709 47.826 0.00 0.00 0.00 3.18
2743 4793 4.031611 GGTGGTAGGAGATTGAAGTAGGT 58.968 47.826 0.00 0.00 0.00 3.08
2744 4794 4.099727 GGTGGTAGGAGATTGAAGTAGGTC 59.900 50.000 0.00 0.00 0.00 3.85
2745 4795 4.957327 GTGGTAGGAGATTGAAGTAGGTCT 59.043 45.833 0.00 0.00 0.00 3.85
2746 4796 5.422650 GTGGTAGGAGATTGAAGTAGGTCTT 59.577 44.000 0.00 0.00 39.32 3.01
2747 4797 5.422331 TGGTAGGAGATTGAAGTAGGTCTTG 59.578 44.000 0.00 0.00 36.40 3.02
2749 4799 3.198853 AGGAGATTGAAGTAGGTCTTGGC 59.801 47.826 0.00 0.00 36.40 4.52
2750 4800 3.055094 GGAGATTGAAGTAGGTCTTGGCA 60.055 47.826 0.00 0.00 36.40 4.92
2751 4801 4.384647 GGAGATTGAAGTAGGTCTTGGCAT 60.385 45.833 0.00 0.00 36.40 4.40
2752 4802 5.163301 GGAGATTGAAGTAGGTCTTGGCATA 60.163 44.000 0.00 0.00 36.40 3.14
2754 4804 7.256332 GGAGATTGAAGTAGGTCTTGGCATATA 60.256 40.741 0.00 0.00 36.40 0.86
2755 4805 8.034313 AGATTGAAGTAGGTCTTGGCATATAA 57.966 34.615 0.00 0.00 36.40 0.98
2756 4806 8.494433 AGATTGAAGTAGGTCTTGGCATATAAA 58.506 33.333 0.00 0.00 36.40 1.40
2757 4807 7.859325 TTGAAGTAGGTCTTGGCATATAAAC 57.141 36.000 0.00 0.00 36.40 2.01
2758 4808 7.195374 TGAAGTAGGTCTTGGCATATAAACT 57.805 36.000 0.00 0.00 36.40 2.66
2759 4809 7.630082 TGAAGTAGGTCTTGGCATATAAACTT 58.370 34.615 0.00 0.00 36.40 2.66
2760 4810 7.552687 TGAAGTAGGTCTTGGCATATAAACTTG 59.447 37.037 6.43 0.00 36.40 3.16
2761 4811 7.195374 AGTAGGTCTTGGCATATAAACTTGA 57.805 36.000 0.00 0.00 0.00 3.02
2762 4812 7.630082 AGTAGGTCTTGGCATATAAACTTGAA 58.370 34.615 0.00 0.00 0.00 2.69
2763 4813 8.275040 AGTAGGTCTTGGCATATAAACTTGAAT 58.725 33.333 0.00 0.00 0.00 2.57
2764 4814 7.961326 AGGTCTTGGCATATAAACTTGAATT 57.039 32.000 0.00 0.00 0.00 2.17
2766 4816 8.903820 AGGTCTTGGCATATAAACTTGAATTAC 58.096 33.333 0.00 0.00 0.00 1.89
2767 4817 8.903820 GGTCTTGGCATATAAACTTGAATTACT 58.096 33.333 0.00 0.00 0.00 2.24
2780 4830 8.443953 AACTTGAATTACTAGATGAATGCTCC 57.556 34.615 0.00 0.00 0.00 4.70
2781 4831 6.703607 ACTTGAATTACTAGATGAATGCTCCG 59.296 38.462 0.00 0.00 0.00 4.63
2782 4832 6.405278 TGAATTACTAGATGAATGCTCCGA 57.595 37.500 0.00 0.00 0.00 4.55
2783 4833 6.816136 TGAATTACTAGATGAATGCTCCGAA 58.184 36.000 0.00 0.00 0.00 4.30
2784 4834 6.701841 TGAATTACTAGATGAATGCTCCGAAC 59.298 38.462 0.00 0.00 0.00 3.95
2785 4835 3.085443 ACTAGATGAATGCTCCGAACG 57.915 47.619 0.00 0.00 0.00 3.95
2786 4836 2.427453 ACTAGATGAATGCTCCGAACGT 59.573 45.455 0.00 0.00 0.00 3.99
2787 4837 1.927895 AGATGAATGCTCCGAACGTC 58.072 50.000 0.00 0.00 0.00 4.34
2877 4928 3.067106 AGATGAATGCTTCGAACGTTGT 58.933 40.909 5.00 0.00 0.00 3.32
2885 4936 1.260561 CTTCGAACGTTGTTGTGGGAG 59.739 52.381 5.00 0.00 0.00 4.30
3068 5123 5.807520 GGTACATGCATCGGACTATTCATAG 59.192 44.000 0.00 0.00 36.46 2.23
3093 6352 8.331740 AGTGGGAGTAACATAAGTAGTACTACA 58.668 37.037 29.87 14.42 38.48 2.74
3103 6362 4.767578 AGTAGTACTACATCCGTCCTGA 57.232 45.455 29.87 0.00 38.48 3.86
3113 6372 7.659186 ACTACATCCGTCCTGATTTATTAGTC 58.341 38.462 0.00 0.00 0.00 2.59
3114 6373 5.855045 ACATCCGTCCTGATTTATTAGTCC 58.145 41.667 0.00 0.00 0.00 3.85
3115 6374 5.602978 ACATCCGTCCTGATTTATTAGTCCT 59.397 40.000 0.00 0.00 0.00 3.85
3116 6375 5.786264 TCCGTCCTGATTTATTAGTCCTC 57.214 43.478 0.00 0.00 0.00 3.71
3117 6376 4.587684 TCCGTCCTGATTTATTAGTCCTCC 59.412 45.833 0.00 0.00 0.00 4.30
3119 6378 5.070580 CCGTCCTGATTTATTAGTCCTCCTT 59.929 44.000 0.00 0.00 0.00 3.36
3120 6379 5.986135 CGTCCTGATTTATTAGTCCTCCTTG 59.014 44.000 0.00 0.00 0.00 3.61
3121 6380 6.407074 CGTCCTGATTTATTAGTCCTCCTTGT 60.407 42.308 0.00 0.00 0.00 3.16
3123 6382 8.145122 GTCCTGATTTATTAGTCCTCCTTGTAG 58.855 40.741 0.00 0.00 0.00 2.74
3124 6383 7.844779 TCCTGATTTATTAGTCCTCCTTGTAGT 59.155 37.037 0.00 0.00 0.00 2.73
3125 6384 8.487028 CCTGATTTATTAGTCCTCCTTGTAGTT 58.513 37.037 0.00 0.00 0.00 2.24
3126 6385 9.892130 CTGATTTATTAGTCCTCCTTGTAGTTT 57.108 33.333 0.00 0.00 0.00 2.66
3127 6386 9.667107 TGATTTATTAGTCCTCCTTGTAGTTTG 57.333 33.333 0.00 0.00 0.00 2.93
3128 6387 9.110502 GATTTATTAGTCCTCCTTGTAGTTTGG 57.889 37.037 0.00 0.00 0.00 3.28
3129 6388 4.903045 TTAGTCCTCCTTGTAGTTTGGG 57.097 45.455 0.00 0.00 0.00 4.12
3130 6389 2.702748 AGTCCTCCTTGTAGTTTGGGT 58.297 47.619 0.00 0.00 0.00 4.51
3131 6390 2.638363 AGTCCTCCTTGTAGTTTGGGTC 59.362 50.000 0.00 0.00 0.00 4.46
3132 6391 2.370849 GTCCTCCTTGTAGTTTGGGTCA 59.629 50.000 0.00 0.00 0.00 4.02
3133 6392 3.050089 TCCTCCTTGTAGTTTGGGTCAA 58.950 45.455 0.00 0.00 0.00 3.18
3134 6393 3.460340 TCCTCCTTGTAGTTTGGGTCAAA 59.540 43.478 0.00 0.00 0.00 2.69
3291 6550 5.285134 CGGTCAAATTTAGGCACAAAATACG 59.715 40.000 0.00 0.00 0.00 3.06
3296 6555 9.482627 TCAAATTTAGGCACAAAATACGAAATT 57.517 25.926 0.00 0.00 32.24 1.82
3311 6570 5.303747 ACGAAATTGACCAATAAATGCGA 57.696 34.783 0.00 0.00 0.00 5.10
3314 6573 5.570973 CGAAATTGACCAATAAATGCGAACA 59.429 36.000 0.00 0.00 0.00 3.18
3338 6597 2.951642 GGTAGTAACATGCATGCCACAT 59.048 45.455 26.53 14.77 0.00 3.21
3344 6603 1.826096 ACATGCATGCCACATAAGCAA 59.174 42.857 26.53 0.00 44.83 3.91
3347 6606 2.962125 TGCATGCCACATAAGCAAAAG 58.038 42.857 16.68 0.00 44.83 2.27
3355 6614 5.106197 TGCCACATAAGCAAAAGTAGTGATG 60.106 40.000 0.00 0.00 37.28 3.07
3356 6615 5.106157 GCCACATAAGCAAAAGTAGTGATGT 60.106 40.000 0.00 0.00 0.00 3.06
3357 6616 6.546395 CCACATAAGCAAAAGTAGTGATGTC 58.454 40.000 0.00 0.00 0.00 3.06
3359 6618 7.148188 CCACATAAGCAAAAGTAGTGATGTCAT 60.148 37.037 0.00 0.00 0.00 3.06
3390 6649 8.815565 ACTAATGAGTAATGAGAAGAGAGACA 57.184 34.615 0.00 0.00 32.65 3.41
3391 6650 9.249053 ACTAATGAGTAATGAGAAGAGAGACAA 57.751 33.333 0.00 0.00 32.65 3.18
3402 6661 8.581253 TGAGAAGAGAGACAAATATAGTGACA 57.419 34.615 0.00 0.00 0.00 3.58
3403 6662 9.194972 TGAGAAGAGAGACAAATATAGTGACAT 57.805 33.333 0.00 0.00 0.00 3.06
3427 6686 9.106286 CATAAATATGTTATCATCACACAACGC 57.894 33.333 0.00 0.00 35.70 4.84
3428 6687 6.925610 AATATGTTATCATCACACAACGCT 57.074 33.333 0.00 0.00 35.70 5.07
3429 6688 6.925610 ATATGTTATCATCACACAACGCTT 57.074 33.333 0.00 0.00 35.70 4.68
3430 6689 5.627499 ATGTTATCATCACACAACGCTTT 57.373 34.783 0.00 0.00 0.00 3.51
3431 6690 5.029650 TGTTATCATCACACAACGCTTTC 57.970 39.130 0.00 0.00 0.00 2.62
3432 6691 2.880822 ATCATCACACAACGCTTTCG 57.119 45.000 0.00 0.00 42.43 3.46
3433 6692 1.859383 TCATCACACAACGCTTTCGA 58.141 45.000 0.00 0.00 39.41 3.71
3434 6693 2.205911 TCATCACACAACGCTTTCGAA 58.794 42.857 0.00 0.00 39.41 3.71
3435 6694 2.805671 TCATCACACAACGCTTTCGAAT 59.194 40.909 0.00 0.00 39.41 3.34
3436 6695 2.661504 TCACACAACGCTTTCGAATG 57.338 45.000 0.00 2.02 39.41 2.67
3437 6696 1.044725 CACACAACGCTTTCGAATGC 58.955 50.000 22.38 22.38 39.41 3.56
3438 6697 0.660488 ACACAACGCTTTCGAATGCA 59.340 45.000 28.72 2.50 39.41 3.96
3439 6698 1.064803 ACACAACGCTTTCGAATGCAA 59.935 42.857 28.72 2.14 39.41 4.08
3440 6699 2.115595 CACAACGCTTTCGAATGCAAA 58.884 42.857 28.72 1.77 39.41 3.68
3441 6700 2.533535 CACAACGCTTTCGAATGCAAAA 59.466 40.909 28.72 1.05 39.41 2.44
3442 6701 3.182173 CACAACGCTTTCGAATGCAAAAT 59.818 39.130 28.72 13.26 39.41 1.82
3443 6702 3.182173 ACAACGCTTTCGAATGCAAAATG 59.818 39.130 28.72 22.58 39.41 2.32
3444 6703 3.281341 ACGCTTTCGAATGCAAAATGA 57.719 38.095 28.72 0.00 39.41 2.57
3445 6704 3.236816 ACGCTTTCGAATGCAAAATGAG 58.763 40.909 28.72 16.41 39.41 2.90
3446 6705 3.236816 CGCTTTCGAATGCAAAATGAGT 58.763 40.909 28.72 0.00 38.10 3.41
3447 6706 3.670055 CGCTTTCGAATGCAAAATGAGTT 59.330 39.130 28.72 0.00 38.10 3.01
3448 6707 4.148696 CGCTTTCGAATGCAAAATGAGTTT 59.851 37.500 28.72 0.00 38.10 2.66
3449 6708 5.341993 CGCTTTCGAATGCAAAATGAGTTTA 59.658 36.000 28.72 0.00 38.10 2.01
3450 6709 6.516739 GCTTTCGAATGCAAAATGAGTTTAC 58.483 36.000 25.99 0.00 0.00 2.01
3451 6710 6.143758 GCTTTCGAATGCAAAATGAGTTTACA 59.856 34.615 25.99 0.00 0.00 2.41
3452 6711 7.306515 GCTTTCGAATGCAAAATGAGTTTACAA 60.307 33.333 25.99 0.00 0.00 2.41
3453 6712 7.993821 TTCGAATGCAAAATGAGTTTACAAA 57.006 28.000 0.00 0.00 0.00 2.83
3454 6713 7.621832 TCGAATGCAAAATGAGTTTACAAAG 57.378 32.000 0.00 0.00 0.00 2.77
3455 6714 7.199766 TCGAATGCAAAATGAGTTTACAAAGT 58.800 30.769 0.00 0.00 0.00 2.66
3456 6715 8.346300 TCGAATGCAAAATGAGTTTACAAAGTA 58.654 29.630 0.00 0.00 0.00 2.24
3457 6716 8.963130 CGAATGCAAAATGAGTTTACAAAGTAA 58.037 29.630 0.00 0.00 0.00 2.24
3485 6744 7.807977 ATAAATGTCTGTATGTTGTCATCCC 57.192 36.000 0.00 0.00 35.70 3.85
3486 6745 3.627395 TGTCTGTATGTTGTCATCCCC 57.373 47.619 0.00 0.00 35.70 4.81
3487 6746 2.909662 TGTCTGTATGTTGTCATCCCCA 59.090 45.455 0.00 0.00 35.70 4.96
3488 6747 3.523157 TGTCTGTATGTTGTCATCCCCAT 59.477 43.478 0.00 0.00 35.70 4.00
3489 6748 3.879295 GTCTGTATGTTGTCATCCCCATG 59.121 47.826 0.00 0.00 35.70 3.66
3490 6749 3.779738 TCTGTATGTTGTCATCCCCATGA 59.220 43.478 0.00 0.00 36.62 3.07
3498 6757 1.507140 TCATCCCCATGACACTACCC 58.493 55.000 0.00 0.00 33.80 3.69
3499 6758 1.212375 CATCCCCATGACACTACCCA 58.788 55.000 0.00 0.00 30.57 4.51
3500 6759 1.134098 CATCCCCATGACACTACCCAC 60.134 57.143 0.00 0.00 30.57 4.61
3501 6760 0.118346 TCCCCATGACACTACCCACT 59.882 55.000 0.00 0.00 0.00 4.00
3502 6761 1.363280 TCCCCATGACACTACCCACTA 59.637 52.381 0.00 0.00 0.00 2.74
3503 6762 2.022428 TCCCCATGACACTACCCACTAT 60.022 50.000 0.00 0.00 0.00 2.12
3504 6763 2.104792 CCCCATGACACTACCCACTATG 59.895 54.545 0.00 0.00 0.00 2.23
3505 6764 3.038280 CCCATGACACTACCCACTATGA 58.962 50.000 0.00 0.00 0.00 2.15
3506 6765 3.454447 CCCATGACACTACCCACTATGAA 59.546 47.826 0.00 0.00 0.00 2.57
3507 6766 4.443457 CCCATGACACTACCCACTATGAAG 60.443 50.000 0.00 0.00 0.00 3.02
3508 6767 4.443457 CCATGACACTACCCACTATGAAGG 60.443 50.000 0.00 0.00 0.00 3.46
3509 6768 3.786553 TGACACTACCCACTATGAAGGT 58.213 45.455 0.00 0.00 37.69 3.50
3510 6769 4.938028 TGACACTACCCACTATGAAGGTA 58.062 43.478 0.00 0.00 35.02 3.08
3517 6776 7.598759 CTACCCACTATGAAGGTAGTATGTT 57.401 40.000 7.19 0.00 45.39 2.71
3518 6777 8.701908 CTACCCACTATGAAGGTAGTATGTTA 57.298 38.462 7.19 0.00 45.39 2.41
3519 6778 7.357429 ACCCACTATGAAGGTAGTATGTTAC 57.643 40.000 0.00 0.00 33.29 2.50
3520 6779 7.130775 ACCCACTATGAAGGTAGTATGTTACT 58.869 38.462 0.00 0.00 42.68 2.24
3521 6780 7.622479 ACCCACTATGAAGGTAGTATGTTACTT 59.378 37.037 0.00 0.00 40.14 2.24
3522 6781 8.142551 CCCACTATGAAGGTAGTATGTTACTTC 58.857 40.741 0.00 0.00 40.14 3.01
3523 6782 8.142551 CCACTATGAAGGTAGTATGTTACTTCC 58.857 40.741 0.00 2.99 44.02 3.46
3524 6783 8.142551 CACTATGAAGGTAGTATGTTACTTCCC 58.857 40.741 6.70 2.23 44.56 3.97
3525 6784 7.842743 ACTATGAAGGTAGTATGTTACTTCCCA 59.157 37.037 6.70 1.12 44.56 4.37
3526 6785 6.290294 TGAAGGTAGTATGTTACTTCCCAC 57.710 41.667 6.70 3.43 44.56 4.61
3527 6786 6.021030 TGAAGGTAGTATGTTACTTCCCACT 58.979 40.000 6.70 0.00 44.56 4.00
3528 6787 7.184161 TGAAGGTAGTATGTTACTTCCCACTA 58.816 38.462 6.70 0.00 44.56 2.74
3529 6788 7.842743 TGAAGGTAGTATGTTACTTCCCACTAT 59.157 37.037 6.70 0.00 44.56 2.12
3530 6789 7.598759 AGGTAGTATGTTACTTCCCACTATG 57.401 40.000 6.70 0.00 44.56 2.23
3531 6790 7.359849 AGGTAGTATGTTACTTCCCACTATGA 58.640 38.462 6.70 0.00 44.56 2.15
3532 6791 7.287235 AGGTAGTATGTTACTTCCCACTATGAC 59.713 40.741 6.70 0.00 44.56 3.06
3533 6792 7.287235 GGTAGTATGTTACTTCCCACTATGACT 59.713 40.741 0.26 0.00 39.52 3.41
3534 6793 9.347240 GTAGTATGTTACTTCCCACTATGACTA 57.653 37.037 0.00 0.00 40.14 2.59
3535 6794 8.466617 AGTATGTTACTTCCCACTATGACTAG 57.533 38.462 0.00 0.00 34.86 2.57
3536 6795 5.593679 TGTTACTTCCCACTATGACTAGC 57.406 43.478 0.00 0.00 0.00 3.42
3537 6796 4.404715 TGTTACTTCCCACTATGACTAGCC 59.595 45.833 0.00 0.00 0.00 3.93
3538 6797 3.406512 ACTTCCCACTATGACTAGCCT 57.593 47.619 0.00 0.00 0.00 4.58
3539 6798 3.725634 ACTTCCCACTATGACTAGCCTT 58.274 45.455 0.00 0.00 0.00 4.35
3540 6799 3.452627 ACTTCCCACTATGACTAGCCTTG 59.547 47.826 0.00 0.00 0.00 3.61
3541 6800 1.762957 TCCCACTATGACTAGCCTTGC 59.237 52.381 0.00 0.00 0.00 4.01
3542 6801 1.765314 CCCACTATGACTAGCCTTGCT 59.235 52.381 0.00 0.00 43.41 3.91
3543 6802 2.171448 CCCACTATGACTAGCCTTGCTT 59.829 50.000 0.00 0.00 40.44 3.91
3544 6803 3.370953 CCCACTATGACTAGCCTTGCTTT 60.371 47.826 0.00 0.00 40.44 3.51
3545 6804 3.873952 CCACTATGACTAGCCTTGCTTTC 59.126 47.826 0.00 0.00 40.44 2.62
3546 6805 4.383552 CCACTATGACTAGCCTTGCTTTCT 60.384 45.833 0.00 0.00 40.44 2.52
3547 6806 5.181748 CACTATGACTAGCCTTGCTTTCTT 58.818 41.667 0.00 0.00 40.44 2.52
3548 6807 5.645497 CACTATGACTAGCCTTGCTTTCTTT 59.355 40.000 0.00 0.00 40.44 2.52
3549 6808 5.877564 ACTATGACTAGCCTTGCTTTCTTTC 59.122 40.000 0.00 0.00 40.44 2.62
3550 6809 3.067106 TGACTAGCCTTGCTTTCTTTCG 58.933 45.455 0.00 0.00 40.44 3.46
3551 6810 3.067833 GACTAGCCTTGCTTTCTTTCGT 58.932 45.455 0.00 0.00 40.44 3.85
3552 6811 2.808543 ACTAGCCTTGCTTTCTTTCGTG 59.191 45.455 0.00 0.00 40.44 4.35
3553 6812 1.680338 AGCCTTGCTTTCTTTCGTGT 58.320 45.000 0.00 0.00 33.89 4.49
3554 6813 2.846193 AGCCTTGCTTTCTTTCGTGTA 58.154 42.857 0.00 0.00 33.89 2.90
3555 6814 3.412386 AGCCTTGCTTTCTTTCGTGTAT 58.588 40.909 0.00 0.00 33.89 2.29
3556 6815 3.189287 AGCCTTGCTTTCTTTCGTGTATG 59.811 43.478 0.00 0.00 33.89 2.39
3557 6816 3.058224 GCCTTGCTTTCTTTCGTGTATGT 60.058 43.478 0.00 0.00 0.00 2.29
3558 6817 4.556699 GCCTTGCTTTCTTTCGTGTATGTT 60.557 41.667 0.00 0.00 0.00 2.71
3559 6818 4.911610 CCTTGCTTTCTTTCGTGTATGTTG 59.088 41.667 0.00 0.00 0.00 3.33
3560 6819 3.884169 TGCTTTCTTTCGTGTATGTTGC 58.116 40.909 0.00 0.00 0.00 4.17
3561 6820 3.313803 TGCTTTCTTTCGTGTATGTTGCA 59.686 39.130 0.00 0.00 0.00 4.08
3562 6821 4.023279 TGCTTTCTTTCGTGTATGTTGCAT 60.023 37.500 0.00 0.00 0.00 3.96
3563 6822 4.917415 GCTTTCTTTCGTGTATGTTGCATT 59.083 37.500 0.00 0.00 0.00 3.56
3564 6823 6.083630 GCTTTCTTTCGTGTATGTTGCATTA 58.916 36.000 0.00 0.00 0.00 1.90
3565 6824 6.580791 GCTTTCTTTCGTGTATGTTGCATTAA 59.419 34.615 0.00 0.00 0.00 1.40
3566 6825 7.273381 GCTTTCTTTCGTGTATGTTGCATTAAT 59.727 33.333 0.00 0.00 0.00 1.40
3567 6826 8.446489 TTTCTTTCGTGTATGTTGCATTAATG 57.554 30.769 11.27 11.27 0.00 1.90
3583 6842 6.897259 CATTAATGCTTGCATGCTTTAGTT 57.103 33.333 23.31 15.25 35.19 2.24
3584 6843 7.298507 CATTAATGCTTGCATGCTTTAGTTT 57.701 32.000 23.31 13.34 35.19 2.66
3585 6844 7.745015 CATTAATGCTTGCATGCTTTAGTTTT 58.255 30.769 23.31 12.44 35.19 2.43
3586 6845 5.600908 AATGCTTGCATGCTTTAGTTTTG 57.399 34.783 23.31 0.00 0.00 2.44
3587 6846 4.319139 TGCTTGCATGCTTTAGTTTTGA 57.681 36.364 23.31 0.00 0.00 2.69
3588 6847 4.300803 TGCTTGCATGCTTTAGTTTTGAG 58.699 39.130 23.31 0.00 0.00 3.02
3589 6848 3.676646 GCTTGCATGCTTTAGTTTTGAGG 59.323 43.478 20.33 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.907866 TTTTCTCTTTCAAACGAACCCTT 57.092 34.783 0.00 0.00 0.00 3.95
1 2 5.907866 TTTTTCTCTTTCAAACGAACCCT 57.092 34.783 0.00 0.00 0.00 4.34
20 21 3.434940 AGGGTAATCCTGCGAGTTTTT 57.565 42.857 0.00 0.00 46.07 1.94
51 52 8.980596 TCATTATGATTCAATAAAGTGCCCTTT 58.019 29.630 0.00 0.00 43.30 3.11
52 53 8.537728 TCATTATGATTCAATAAAGTGCCCTT 57.462 30.769 0.00 0.00 0.00 3.95
53 54 8.537728 TTCATTATGATTCAATAAAGTGCCCT 57.462 30.769 0.00 0.00 0.00 5.19
54 55 7.383300 GCTTCATTATGATTCAATAAAGTGCCC 59.617 37.037 0.00 0.00 0.00 5.36
55 56 7.922278 TGCTTCATTATGATTCAATAAAGTGCC 59.078 33.333 0.00 0.00 0.00 5.01
56 57 8.861033 TGCTTCATTATGATTCAATAAAGTGC 57.139 30.769 0.00 0.00 0.00 4.40
76 77 9.162793 CGTTTCTTCATTATGATTGTATGCTTC 57.837 33.333 0.00 0.00 0.00 3.86
77 78 7.645340 GCGTTTCTTCATTATGATTGTATGCTT 59.355 33.333 0.00 0.00 0.00 3.91
78 79 7.012704 AGCGTTTCTTCATTATGATTGTATGCT 59.987 33.333 0.00 2.83 0.00 3.79
79 80 7.134815 AGCGTTTCTTCATTATGATTGTATGC 58.865 34.615 0.00 0.64 0.00 3.14
80 81 7.528516 CGAGCGTTTCTTCATTATGATTGTATG 59.471 37.037 0.00 0.00 0.00 2.39
81 82 7.438160 TCGAGCGTTTCTTCATTATGATTGTAT 59.562 33.333 0.00 0.00 0.00 2.29
82 83 6.754675 TCGAGCGTTTCTTCATTATGATTGTA 59.245 34.615 0.00 0.00 0.00 2.41
83 84 5.580691 TCGAGCGTTTCTTCATTATGATTGT 59.419 36.000 0.00 0.00 0.00 2.71
84 85 5.898606 GTCGAGCGTTTCTTCATTATGATTG 59.101 40.000 0.00 0.00 0.00 2.67
85 86 5.006746 GGTCGAGCGTTTCTTCATTATGATT 59.993 40.000 0.00 0.00 0.00 2.57
86 87 4.508124 GGTCGAGCGTTTCTTCATTATGAT 59.492 41.667 0.00 0.00 0.00 2.45
87 88 3.863424 GGTCGAGCGTTTCTTCATTATGA 59.137 43.478 0.00 0.00 0.00 2.15
88 89 3.865745 AGGTCGAGCGTTTCTTCATTATG 59.134 43.478 9.28 0.00 0.00 1.90
89 90 4.113354 GAGGTCGAGCGTTTCTTCATTAT 58.887 43.478 9.28 0.00 0.00 1.28
90 91 3.192844 AGAGGTCGAGCGTTTCTTCATTA 59.807 43.478 9.28 0.00 0.00 1.90
91 92 2.028930 AGAGGTCGAGCGTTTCTTCATT 60.029 45.455 9.28 0.00 0.00 2.57
92 93 1.546476 AGAGGTCGAGCGTTTCTTCAT 59.454 47.619 9.28 0.00 0.00 2.57
93 94 0.959553 AGAGGTCGAGCGTTTCTTCA 59.040 50.000 9.28 0.00 0.00 3.02
94 95 1.068472 TCAGAGGTCGAGCGTTTCTTC 60.068 52.381 9.28 0.00 0.00 2.87
95 96 0.959553 TCAGAGGTCGAGCGTTTCTT 59.040 50.000 9.28 0.00 0.00 2.52
96 97 0.959553 TTCAGAGGTCGAGCGTTTCT 59.040 50.000 9.28 3.93 0.00 2.52
97 98 1.997669 ATTCAGAGGTCGAGCGTTTC 58.002 50.000 9.28 1.35 0.00 2.78
98 99 2.492484 ACTATTCAGAGGTCGAGCGTTT 59.508 45.455 9.28 0.00 0.00 3.60
99 100 2.093106 ACTATTCAGAGGTCGAGCGTT 58.907 47.619 9.28 0.00 0.00 4.84
100 101 1.752683 ACTATTCAGAGGTCGAGCGT 58.247 50.000 9.28 0.00 0.00 5.07
101 102 2.853731 AACTATTCAGAGGTCGAGCG 57.146 50.000 9.28 0.00 0.00 5.03
102 103 5.502153 TCTTAACTATTCAGAGGTCGAGC 57.498 43.478 6.48 6.48 0.00 5.03
103 104 8.155821 TGTATCTTAACTATTCAGAGGTCGAG 57.844 38.462 0.00 0.00 0.00 4.04
104 105 8.693120 ATGTATCTTAACTATTCAGAGGTCGA 57.307 34.615 0.00 0.00 0.00 4.20
171 172 5.939457 AGCTTCCGTCTTTTATAACTTTGC 58.061 37.500 0.00 0.00 0.00 3.68
176 177 5.758784 AGGCATAGCTTCCGTCTTTTATAAC 59.241 40.000 0.00 0.00 0.00 1.89
178 179 5.546621 AGGCATAGCTTCCGTCTTTTATA 57.453 39.130 0.00 0.00 0.00 0.98
187 188 3.425422 GCCAAGGCATAGCTTCCG 58.575 61.111 6.14 0.00 41.49 4.30
225 226 0.443869 CGGTGTTTGATCGCTTCAGG 59.556 55.000 0.00 0.00 35.27 3.86
226 227 1.428448 TCGGTGTTTGATCGCTTCAG 58.572 50.000 0.00 0.00 35.27 3.02
234 235 7.210718 TGTATATCGTCTATCGGTGTTTGAT 57.789 36.000 0.00 0.00 40.32 2.57
251 252 4.808895 TGTCCATGCTCGTTGTTGTATATC 59.191 41.667 0.00 0.00 0.00 1.63
263 264 2.205074 GATAGTTGGTGTCCATGCTCG 58.795 52.381 0.00 0.00 31.53 5.03
271 272 4.814234 TGTTGTCAAGTGATAGTTGGTGTC 59.186 41.667 0.00 0.00 0.00 3.67
301 302 6.130298 TGCTTTTGAAGAATCTTTTCGTGA 57.870 33.333 0.00 0.00 36.93 4.35
302 303 6.558433 CGTTGCTTTTGAAGAATCTTTTCGTG 60.558 38.462 0.00 0.00 36.93 4.35
314 315 5.331902 TCTTTGAAGACGTTGCTTTTGAAG 58.668 37.500 0.00 0.00 0.00 3.02
331 332 4.436852 GCTTGTGTGTCGTTCTTTCTTTGA 60.437 41.667 0.00 0.00 0.00 2.69
332 333 3.786048 GCTTGTGTGTCGTTCTTTCTTTG 59.214 43.478 0.00 0.00 0.00 2.77
335 336 1.593006 CGCTTGTGTGTCGTTCTTTCT 59.407 47.619 0.00 0.00 0.00 2.52
336 337 1.915965 GCGCTTGTGTGTCGTTCTTTC 60.916 52.381 0.00 0.00 0.00 2.62
340 341 2.248431 GGCGCTTGTGTGTCGTTC 59.752 61.111 7.64 0.00 0.00 3.95
358 359 3.007940 TGAAGGTTGGATCTGACGATTGT 59.992 43.478 0.00 0.00 0.00 2.71
360 361 3.981071 TGAAGGTTGGATCTGACGATT 57.019 42.857 0.00 0.00 0.00 3.34
365 366 3.157087 GGCTTTTGAAGGTTGGATCTGA 58.843 45.455 0.00 0.00 0.00 3.27
366 367 2.892852 TGGCTTTTGAAGGTTGGATCTG 59.107 45.455 0.00 0.00 0.00 2.90
380 381 5.279156 GGTGAAAACTCATGATCTGGCTTTT 60.279 40.000 0.00 0.00 0.00 2.27
384 385 2.424956 GGGTGAAAACTCATGATCTGGC 59.575 50.000 0.00 0.00 0.00 4.85
385 386 3.944015 GAGGGTGAAAACTCATGATCTGG 59.056 47.826 0.00 0.00 33.95 3.86
407 408 4.311816 AGTTTGCTTGGACATGAACTTG 57.688 40.909 0.00 0.00 0.00 3.16
409 410 4.311816 CAAGTTTGCTTGGACATGAACT 57.688 40.909 0.00 0.00 46.17 3.01
420 421 6.815089 TGATGGTATTGTTTCAAGTTTGCTT 58.185 32.000 0.00 0.00 34.82 3.91
446 447 5.623335 CGAAGATTTTGCGTTGTTACCATA 58.377 37.500 0.00 0.00 0.00 2.74
456 457 0.385473 CAACGGCGAAGATTTTGCGT 60.385 50.000 16.62 0.00 41.10 5.24
457 458 1.664643 GCAACGGCGAAGATTTTGCG 61.665 55.000 16.62 0.00 41.10 4.85
462 463 0.889186 ACCTTGCAACGGCGAAGATT 60.889 50.000 16.62 0.00 45.35 2.40
466 467 1.733360 GTTATACCTTGCAACGGCGAA 59.267 47.619 16.62 0.00 45.35 4.70
472 473 5.353400 GTCCTACTTGGTTATACCTTGCAAC 59.647 44.000 0.00 0.00 39.58 4.17
475 476 4.080751 TGGTCCTACTTGGTTATACCTTGC 60.081 45.833 0.00 0.00 39.58 4.01
480 481 5.878669 CAGGTTTGGTCCTACTTGGTTATAC 59.121 44.000 0.00 0.00 35.87 1.47
486 487 1.271926 CCCAGGTTTGGTCCTACTTGG 60.272 57.143 14.87 14.87 43.40 3.61
489 490 0.104090 ACCCCAGGTTTGGTCCTACT 60.104 55.000 0.00 0.00 43.40 2.57
507 509 0.955919 CTTGAGCTCCGGGGTGAAAC 60.956 60.000 12.15 0.00 0.00 2.78
517 519 2.229302 AGAGTACGTTGTCTTGAGCTCC 59.771 50.000 12.15 0.00 0.00 4.70
523 525 4.617645 GTGCTTCTAGAGTACGTTGTCTTG 59.382 45.833 0.00 0.00 31.22 3.02
524 526 4.321082 GGTGCTTCTAGAGTACGTTGTCTT 60.321 45.833 0.00 0.00 41.39 3.01
529 531 3.155501 AGTGGTGCTTCTAGAGTACGTT 58.844 45.455 0.00 0.00 41.39 3.99
530 532 2.792878 AGTGGTGCTTCTAGAGTACGT 58.207 47.619 0.00 0.00 41.39 3.57
531 533 3.502920 CAAGTGGTGCTTCTAGAGTACG 58.497 50.000 0.00 0.00 41.39 3.67
546 548 1.077212 CTGGGATGGAGGCAAGTGG 60.077 63.158 0.00 0.00 0.00 4.00
557 620 3.733507 ATGGGCTGCTGCTGGGATG 62.734 63.158 15.64 0.00 39.59 3.51
587 653 4.514441 CCTCCCTCATCAAAGATTTCATCG 59.486 45.833 0.00 0.00 0.00 3.84
618 684 0.249911 AATATCTCGGGCGGTGCTTC 60.250 55.000 0.00 0.00 0.00 3.86
648 714 2.693762 CGCATGGCCTGTGACAAGG 61.694 63.158 3.32 0.00 37.57 3.61
677 750 0.521735 GGCCGGTGACAATTCTCAAC 59.478 55.000 1.90 0.00 0.00 3.18
705 778 7.887381 TCAAACCTTGTCAGTAAGTTCAAAAA 58.113 30.769 0.00 0.00 0.00 1.94
706 779 7.455641 TCAAACCTTGTCAGTAAGTTCAAAA 57.544 32.000 0.00 0.00 0.00 2.44
707 780 7.122055 ACATCAAACCTTGTCAGTAAGTTCAAA 59.878 33.333 0.00 0.00 0.00 2.69
708 781 6.601613 ACATCAAACCTTGTCAGTAAGTTCAA 59.398 34.615 0.00 0.00 0.00 2.69
709 782 6.119536 ACATCAAACCTTGTCAGTAAGTTCA 58.880 36.000 0.00 0.00 0.00 3.18
710 783 6.564125 CGACATCAAACCTTGTCAGTAAGTTC 60.564 42.308 4.20 0.00 41.85 3.01
711 784 5.236478 CGACATCAAACCTTGTCAGTAAGTT 59.764 40.000 4.20 0.00 41.85 2.66
712 785 4.750098 CGACATCAAACCTTGTCAGTAAGT 59.250 41.667 4.20 0.00 41.85 2.24
713 786 4.988540 TCGACATCAAACCTTGTCAGTAAG 59.011 41.667 4.20 0.00 41.85 2.34
714 787 4.748102 GTCGACATCAAACCTTGTCAGTAA 59.252 41.667 11.55 0.00 41.85 2.24
715 788 4.038763 AGTCGACATCAAACCTTGTCAGTA 59.961 41.667 19.50 0.00 41.85 2.74
716 789 3.131396 GTCGACATCAAACCTTGTCAGT 58.869 45.455 11.55 0.00 41.85 3.41
717 790 3.185188 CAGTCGACATCAAACCTTGTCAG 59.815 47.826 19.50 0.00 41.85 3.51
718 791 3.130633 CAGTCGACATCAAACCTTGTCA 58.869 45.455 19.50 0.00 41.85 3.58
719 792 2.480419 CCAGTCGACATCAAACCTTGTC 59.520 50.000 19.50 0.00 39.07 3.18
720 793 2.104111 TCCAGTCGACATCAAACCTTGT 59.896 45.455 19.50 0.00 0.00 3.16
721 794 2.766313 TCCAGTCGACATCAAACCTTG 58.234 47.619 19.50 3.44 0.00 3.61
722 795 3.485463 TTCCAGTCGACATCAAACCTT 57.515 42.857 19.50 0.00 0.00 3.50
723 796 3.485463 TTTCCAGTCGACATCAAACCT 57.515 42.857 19.50 0.00 0.00 3.50
724 797 4.766404 AATTTCCAGTCGACATCAAACC 57.234 40.909 19.50 0.00 0.00 3.27
725 798 6.072673 AGGTTAATTTCCAGTCGACATCAAAC 60.073 38.462 19.50 10.03 0.00 2.93
726 799 6.001460 AGGTTAATTTCCAGTCGACATCAAA 58.999 36.000 19.50 12.65 0.00 2.69
727 800 5.556915 AGGTTAATTTCCAGTCGACATCAA 58.443 37.500 19.50 5.16 0.00 2.57
728 801 5.160607 AGGTTAATTTCCAGTCGACATCA 57.839 39.130 19.50 0.00 0.00 3.07
729 802 7.413767 GGTTAAGGTTAATTTCCAGTCGACATC 60.414 40.741 19.50 0.00 0.00 3.06
730 803 6.373495 GGTTAAGGTTAATTTCCAGTCGACAT 59.627 38.462 19.50 0.00 0.00 3.06
731 804 5.702209 GGTTAAGGTTAATTTCCAGTCGACA 59.298 40.000 19.50 0.00 0.00 4.35
732 805 5.702209 TGGTTAAGGTTAATTTCCAGTCGAC 59.298 40.000 7.70 7.70 0.00 4.20
733 806 5.867330 TGGTTAAGGTTAATTTCCAGTCGA 58.133 37.500 2.93 0.00 0.00 4.20
734 807 6.404293 CCATGGTTAAGGTTAATTTCCAGTCG 60.404 42.308 2.57 0.00 0.00 4.18
735 808 6.436218 ACCATGGTTAAGGTTAATTTCCAGTC 59.564 38.462 13.00 0.00 33.39 3.51
736 809 6.319715 ACCATGGTTAAGGTTAATTTCCAGT 58.680 36.000 13.00 0.00 33.39 4.00
737 810 6.850752 ACCATGGTTAAGGTTAATTTCCAG 57.149 37.500 13.00 0.00 33.39 3.86
738 811 8.903059 AATACCATGGTTAAGGTTAATTTCCA 57.097 30.769 25.38 0.00 39.31 3.53
745 818 8.407064 CGCAATTAAATACCATGGTTAAGGTTA 58.593 33.333 25.38 11.34 39.31 2.85
746 819 7.093684 ACGCAATTAAATACCATGGTTAAGGTT 60.094 33.333 25.38 12.31 39.31 3.50
747 820 6.378848 ACGCAATTAAATACCATGGTTAAGGT 59.621 34.615 25.38 9.57 41.89 3.50
748 821 6.801575 ACGCAATTAAATACCATGGTTAAGG 58.198 36.000 25.38 12.61 0.00 2.69
749 822 9.959749 AATACGCAATTAAATACCATGGTTAAG 57.040 29.630 25.38 6.24 0.00 1.85
750 823 9.737427 CAATACGCAATTAAATACCATGGTTAA 57.263 29.630 25.38 16.10 0.00 2.01
751 824 8.904834 ACAATACGCAATTAAATACCATGGTTA 58.095 29.630 25.38 6.70 0.00 2.85
752 825 7.704472 CACAATACGCAATTAAATACCATGGTT 59.296 33.333 25.38 7.89 0.00 3.67
753 826 7.199766 CACAATACGCAATTAAATACCATGGT 58.800 34.615 23.55 23.55 0.00 3.55
754 827 6.143758 GCACAATACGCAATTAAATACCATGG 59.856 38.462 11.19 11.19 0.00 3.66
755 828 6.694844 TGCACAATACGCAATTAAATACCATG 59.305 34.615 0.00 0.00 36.17 3.66
756 829 6.800543 TGCACAATACGCAATTAAATACCAT 58.199 32.000 0.00 0.00 36.17 3.55
757 830 6.196079 TGCACAATACGCAATTAAATACCA 57.804 33.333 0.00 0.00 36.17 3.25
768 841 1.136356 CGGCATTGCACAATACGCA 59.864 52.632 11.39 0.00 37.68 5.24
769 842 2.223549 GCGGCATTGCACAATACGC 61.224 57.895 20.91 20.91 43.56 4.42
770 843 1.933997 CGCGGCATTGCACAATACG 60.934 57.895 11.39 12.53 35.13 3.06
771 844 2.223549 GCGCGGCATTGCACAATAC 61.224 57.895 8.83 0.00 34.15 1.89
772 845 2.101965 GCGCGGCATTGCACAATA 59.898 55.556 8.83 0.00 34.15 1.90
773 846 2.839043 ATTGCGCGGCATTGCACAAT 62.839 50.000 8.83 10.95 41.41 2.71
774 847 3.570621 ATTGCGCGGCATTGCACAA 62.571 52.632 8.83 9.18 41.57 3.33
775 848 3.967833 GATTGCGCGGCATTGCACA 62.968 57.895 8.83 0.00 41.57 4.57
776 849 3.249605 GATTGCGCGGCATTGCAC 61.250 61.111 8.83 0.73 41.57 4.57
777 850 4.495336 GGATTGCGCGGCATTGCA 62.495 61.111 8.83 0.00 38.76 4.08
779 852 4.178214 ACGGATTGCGCGGCATTG 62.178 61.111 8.83 0.00 38.76 2.82
780 853 3.876198 GACGGATTGCGCGGCATT 61.876 61.111 8.83 2.78 38.76 3.56
787 860 0.874175 TAAGATGGCGACGGATTGCG 60.874 55.000 0.00 0.00 35.86 4.85
788 861 0.582005 GTAAGATGGCGACGGATTGC 59.418 55.000 0.00 0.00 34.00 3.56
789 862 1.217882 GGTAAGATGGCGACGGATTG 58.782 55.000 0.00 0.00 0.00 2.67
790 863 0.106149 GGGTAAGATGGCGACGGATT 59.894 55.000 0.00 0.00 0.00 3.01
791 864 1.046472 TGGGTAAGATGGCGACGGAT 61.046 55.000 0.00 0.00 0.00 4.18
792 865 1.046472 ATGGGTAAGATGGCGACGGA 61.046 55.000 0.00 0.00 0.00 4.69
793 866 0.179056 AATGGGTAAGATGGCGACGG 60.179 55.000 0.00 0.00 0.00 4.79
794 867 0.937304 CAATGGGTAAGATGGCGACG 59.063 55.000 0.00 0.00 0.00 5.12
795 868 1.308998 CCAATGGGTAAGATGGCGAC 58.691 55.000 0.00 0.00 0.00 5.19
796 869 3.798794 CCAATGGGTAAGATGGCGA 57.201 52.632 0.00 0.00 0.00 5.54
798 871 5.696668 GTACACACCAATGGGTAAGATGGC 61.697 50.000 3.55 0.00 46.38 4.40
799 872 3.945285 GTACACACCAATGGGTAAGATGG 59.055 47.826 3.55 0.00 46.38 3.51
800 873 3.621268 CGTACACACCAATGGGTAAGATG 59.379 47.826 3.55 0.00 46.38 2.90
801 874 3.262405 ACGTACACACCAATGGGTAAGAT 59.738 43.478 3.55 0.00 46.38 2.40
802 875 2.633967 ACGTACACACCAATGGGTAAGA 59.366 45.455 3.55 0.00 46.38 2.10
803 876 3.048337 ACGTACACACCAATGGGTAAG 57.952 47.619 3.55 1.58 46.38 2.34
804 877 3.139850 CAACGTACACACCAATGGGTAA 58.860 45.455 3.55 0.00 46.38 2.85
807 880 1.600023 ACAACGTACACACCAATGGG 58.400 50.000 3.55 0.00 41.29 4.00
808 881 2.356382 ACAACAACGTACACACCAATGG 59.644 45.455 0.00 0.00 0.00 3.16
809 882 3.181505 ACACAACAACGTACACACCAATG 60.182 43.478 0.00 0.00 0.00 2.82
810 883 3.011119 ACACAACAACGTACACACCAAT 58.989 40.909 0.00 0.00 0.00 3.16
811 884 2.159824 CACACAACAACGTACACACCAA 59.840 45.455 0.00 0.00 0.00 3.67
812 885 1.732809 CACACAACAACGTACACACCA 59.267 47.619 0.00 0.00 0.00 4.17
813 886 1.733360 ACACACAACAACGTACACACC 59.267 47.619 0.00 0.00 0.00 4.16
814 887 2.222863 GGACACACAACAACGTACACAC 60.223 50.000 0.00 0.00 0.00 3.82
815 888 2.001159 GGACACACAACAACGTACACA 58.999 47.619 0.00 0.00 0.00 3.72
816 889 2.001159 TGGACACACAACAACGTACAC 58.999 47.619 0.00 0.00 0.00 2.90
817 890 2.381725 TGGACACACAACAACGTACA 57.618 45.000 0.00 0.00 0.00 2.90
818 891 3.955771 AATGGACACACAACAACGTAC 57.044 42.857 0.00 0.00 0.00 3.67
819 892 4.201930 GGAAAATGGACACACAACAACGTA 60.202 41.667 0.00 0.00 0.00 3.57
820 893 3.428316 GGAAAATGGACACACAACAACGT 60.428 43.478 0.00 0.00 0.00 3.99
821 894 3.112580 GGAAAATGGACACACAACAACG 58.887 45.455 0.00 0.00 0.00 4.10
822 895 4.116747 TGGAAAATGGACACACAACAAC 57.883 40.909 0.00 0.00 0.00 3.32
877 2018 5.273944 GCTATTTTCCTCTTTTATGGTGCG 58.726 41.667 0.00 0.00 0.00 5.34
889 2043 2.135933 CATCCCGTCGCTATTTTCCTC 58.864 52.381 0.00 0.00 0.00 3.71
960 2114 0.911769 ACTTGCGATCTGGGAATCCA 59.088 50.000 0.09 0.00 41.58 3.41
970 2124 1.329906 CTGCTCATGGAACTTGCGATC 59.670 52.381 0.00 0.00 0.00 3.69
1014 2168 2.745100 AGGAGCACGTACGCGAGA 60.745 61.111 15.93 0.00 42.00 4.04
1458 2621 4.295119 AAGCGACGGCCGAGTTGT 62.295 61.111 35.90 9.07 41.76 3.32
1780 2943 1.134280 CACCTCCTTGGCTTCGATGAT 60.134 52.381 1.89 0.00 40.22 2.45
2562 3725 1.556911 ACTTCTTGTCCAGATGCCGAT 59.443 47.619 0.00 0.00 31.03 4.18
2619 3782 3.195661 CCAGAAGTCCAGCCGTAATTAC 58.804 50.000 5.47 5.47 0.00 1.89
2627 3790 0.178990 ACAAACCCAGAAGTCCAGCC 60.179 55.000 0.00 0.00 0.00 4.85
2633 3796 3.714798 TGACTAAGGACAAACCCAGAAGT 59.285 43.478 0.00 0.00 40.05 3.01
2724 4774 5.163395 CCAAGACCTACTTCAATCTCCTACC 60.163 48.000 0.00 0.00 36.61 3.18
2729 4779 4.207891 TGCCAAGACCTACTTCAATCTC 57.792 45.455 0.00 0.00 36.61 2.75
2754 4804 8.897752 GGAGCATTCATCTAGTAATTCAAGTTT 58.102 33.333 0.00 0.00 0.00 2.66
2755 4805 7.225538 CGGAGCATTCATCTAGTAATTCAAGTT 59.774 37.037 0.00 0.00 0.00 2.66
2756 4806 6.703607 CGGAGCATTCATCTAGTAATTCAAGT 59.296 38.462 0.00 0.00 0.00 3.16
2757 4807 6.925718 TCGGAGCATTCATCTAGTAATTCAAG 59.074 38.462 0.00 0.00 0.00 3.02
2758 4808 6.816136 TCGGAGCATTCATCTAGTAATTCAA 58.184 36.000 0.00 0.00 0.00 2.69
2759 4809 6.405278 TCGGAGCATTCATCTAGTAATTCA 57.595 37.500 0.00 0.00 0.00 2.57
2760 4810 6.129062 CGTTCGGAGCATTCATCTAGTAATTC 60.129 42.308 0.00 0.00 0.00 2.17
2761 4811 5.692204 CGTTCGGAGCATTCATCTAGTAATT 59.308 40.000 0.00 0.00 0.00 1.40
2762 4812 5.221263 ACGTTCGGAGCATTCATCTAGTAAT 60.221 40.000 0.00 0.00 0.00 1.89
2763 4813 4.097437 ACGTTCGGAGCATTCATCTAGTAA 59.903 41.667 0.00 0.00 0.00 2.24
2764 4814 3.630769 ACGTTCGGAGCATTCATCTAGTA 59.369 43.478 0.00 0.00 0.00 1.82
2765 4815 2.427453 ACGTTCGGAGCATTCATCTAGT 59.573 45.455 0.00 0.00 0.00 2.57
2766 4816 3.046390 GACGTTCGGAGCATTCATCTAG 58.954 50.000 0.00 0.00 0.00 2.43
2767 4817 2.688446 AGACGTTCGGAGCATTCATCTA 59.312 45.455 0.00 0.00 0.00 1.98
2768 4818 1.478510 AGACGTTCGGAGCATTCATCT 59.521 47.619 0.00 0.00 0.00 2.90
2769 4819 1.927895 AGACGTTCGGAGCATTCATC 58.072 50.000 0.00 0.00 0.00 2.92
2770 4820 2.386661 AAGACGTTCGGAGCATTCAT 57.613 45.000 0.00 0.00 0.00 2.57
2771 4821 3.119280 TCATAAGACGTTCGGAGCATTCA 60.119 43.478 0.00 0.00 0.00 2.57
2772 4822 3.444916 TCATAAGACGTTCGGAGCATTC 58.555 45.455 0.00 0.00 0.00 2.67
2773 4823 3.520290 TCATAAGACGTTCGGAGCATT 57.480 42.857 0.00 0.00 0.00 3.56
2774 4824 3.520290 TTCATAAGACGTTCGGAGCAT 57.480 42.857 0.00 0.00 0.00 3.79
2775 4825 3.306917 TTTCATAAGACGTTCGGAGCA 57.693 42.857 0.00 0.00 0.00 4.26
2776 4826 7.813852 ATATATTTCATAAGACGTTCGGAGC 57.186 36.000 0.00 0.00 0.00 4.70
2778 4828 9.976511 AGAAATATATTTCATAAGACGTTCGGA 57.023 29.630 30.52 0.00 46.50 4.55
2867 4917 0.176219 ACTCCCACAACAACGTTCGA 59.824 50.000 0.00 0.00 0.00 3.71
2885 4936 8.987890 ACCAGCACAATTTTATTTCATACAAAC 58.012 29.630 0.00 0.00 0.00 2.93
3003 5056 8.984891 TGCTTCAATTTTCAACTTATACATGG 57.015 30.769 0.00 0.00 0.00 3.66
3032 5085 8.271458 TCCGATGCATGTACCCATATTATTATT 58.729 33.333 2.46 0.00 0.00 1.40
3034 5087 7.045416 GTCCGATGCATGTACCCATATTATTA 58.955 38.462 2.46 0.00 0.00 0.98
3041 5096 1.131638 AGTCCGATGCATGTACCCAT 58.868 50.000 2.46 0.00 0.00 4.00
3068 5123 8.511604 TGTAGTACTACTTATGTTACTCCCAC 57.488 38.462 28.56 4.35 37.00 4.61
3093 6352 5.246429 GGAGGACTAATAAATCAGGACGGAT 59.754 44.000 0.00 0.00 0.00 4.18
3103 6362 8.053355 CCCAAACTACAAGGAGGACTAATAAAT 58.947 37.037 0.00 0.00 0.00 1.40
3113 6372 3.502123 TTGACCCAAACTACAAGGAGG 57.498 47.619 0.00 0.00 0.00 4.30
3114 6373 4.830826 GTTTGACCCAAACTACAAGGAG 57.169 45.455 13.49 0.00 46.84 3.69
3257 6516 6.128117 TGCCTAAATTTGACCGTAGATTTGAC 60.128 38.462 0.00 0.00 0.00 3.18
3291 6550 6.806249 TCTGTTCGCATTTATTGGTCAATTTC 59.194 34.615 1.28 0.00 32.50 2.17
3296 6555 3.689161 CCTCTGTTCGCATTTATTGGTCA 59.311 43.478 0.00 0.00 0.00 4.02
3308 6567 2.603560 GCATGTTACTACCTCTGTTCGC 59.396 50.000 0.00 0.00 0.00 4.70
3311 6570 3.941483 GCATGCATGTTACTACCTCTGTT 59.059 43.478 26.79 0.00 0.00 3.16
3314 6573 2.505407 TGGCATGCATGTTACTACCTCT 59.495 45.455 26.79 0.00 0.00 3.69
3376 6635 9.194972 TGTCACTATATTTGTCTCTCTTCTCAT 57.805 33.333 0.00 0.00 0.00 2.90
3377 6636 8.581253 TGTCACTATATTTGTCTCTCTTCTCA 57.419 34.615 0.00 0.00 0.00 3.27
3401 6660 9.106286 GCGTTGTGTGATGATAACATATTTATG 57.894 33.333 0.00 0.00 36.82 1.90
3402 6661 9.056005 AGCGTTGTGTGATGATAACATATTTAT 57.944 29.630 0.00 0.00 36.82 1.40
3403 6662 8.432110 AGCGTTGTGTGATGATAACATATTTA 57.568 30.769 0.00 0.00 36.82 1.40
3404 6663 7.320443 AGCGTTGTGTGATGATAACATATTT 57.680 32.000 0.00 0.00 36.82 1.40
3405 6664 6.925610 AGCGTTGTGTGATGATAACATATT 57.074 33.333 0.00 0.00 36.82 1.28
3406 6665 6.925610 AAGCGTTGTGTGATGATAACATAT 57.074 33.333 0.00 0.00 36.82 1.78
3407 6666 6.454981 CGAAAGCGTTGTGTGATGATAACATA 60.455 38.462 0.00 0.00 36.82 2.29
3408 6667 5.627499 AAAGCGTTGTGTGATGATAACAT 57.373 34.783 0.00 0.00 39.67 2.71
3409 6668 4.376920 CGAAAGCGTTGTGTGATGATAACA 60.377 41.667 0.00 0.00 0.00 2.41
3410 6669 4.081761 CGAAAGCGTTGTGTGATGATAAC 58.918 43.478 0.00 0.00 0.00 1.89
3411 6670 3.991121 TCGAAAGCGTTGTGTGATGATAA 59.009 39.130 0.00 0.00 38.98 1.75
3412 6671 3.580731 TCGAAAGCGTTGTGTGATGATA 58.419 40.909 0.00 0.00 38.98 2.15
3413 6672 2.412870 TCGAAAGCGTTGTGTGATGAT 58.587 42.857 0.00 0.00 38.98 2.45
3414 6673 1.859383 TCGAAAGCGTTGTGTGATGA 58.141 45.000 0.00 0.00 38.98 2.92
3415 6674 2.661504 TTCGAAAGCGTTGTGTGATG 57.338 45.000 0.00 0.00 38.98 3.07
3416 6675 2.665519 GCATTCGAAAGCGTTGTGTGAT 60.666 45.455 9.87 0.00 38.98 3.06
3417 6676 1.333702 GCATTCGAAAGCGTTGTGTGA 60.334 47.619 9.87 0.00 38.98 3.58
3418 6677 1.044725 GCATTCGAAAGCGTTGTGTG 58.955 50.000 9.87 0.00 38.98 3.82
3419 6678 0.660488 TGCATTCGAAAGCGTTGTGT 59.340 45.000 19.27 0.00 38.98 3.72
3420 6679 1.752753 TTGCATTCGAAAGCGTTGTG 58.247 45.000 19.27 4.70 38.98 3.33
3421 6680 2.483583 TTTGCATTCGAAAGCGTTGT 57.516 40.000 19.27 0.00 38.98 3.32
3422 6681 3.424861 TCATTTTGCATTCGAAAGCGTTG 59.575 39.130 19.27 13.49 38.98 4.10
3423 6682 3.637432 TCATTTTGCATTCGAAAGCGTT 58.363 36.364 19.27 2.64 38.98 4.84
3424 6683 3.236816 CTCATTTTGCATTCGAAAGCGT 58.763 40.909 19.27 4.08 38.98 5.07
3425 6684 3.236816 ACTCATTTTGCATTCGAAAGCG 58.763 40.909 19.27 5.95 39.35 4.68
3426 6685 5.580911 AAACTCATTTTGCATTCGAAAGC 57.419 34.783 17.98 17.98 0.00 3.51
3427 6686 7.621832 TGTAAACTCATTTTGCATTCGAAAG 57.378 32.000 0.00 0.00 35.14 2.62
3428 6687 7.993821 TTGTAAACTCATTTTGCATTCGAAA 57.006 28.000 0.00 0.00 39.28 3.46
3429 6688 7.704472 ACTTTGTAAACTCATTTTGCATTCGAA 59.296 29.630 0.00 0.00 39.28 3.71
3430 6689 7.199766 ACTTTGTAAACTCATTTTGCATTCGA 58.800 30.769 0.00 0.00 39.28 3.71
3431 6690 7.393551 ACTTTGTAAACTCATTTTGCATTCG 57.606 32.000 0.00 0.00 39.28 3.34
3459 6718 8.686334 GGGATGACAACATACAGACATTTATTT 58.314 33.333 0.00 0.00 38.99 1.40
3460 6719 7.285401 GGGGATGACAACATACAGACATTTATT 59.715 37.037 0.00 0.00 38.99 1.40
3461 6720 6.772716 GGGGATGACAACATACAGACATTTAT 59.227 38.462 0.00 0.00 38.99 1.40
3462 6721 6.119536 GGGGATGACAACATACAGACATTTA 58.880 40.000 0.00 0.00 38.99 1.40
3463 6722 4.949856 GGGGATGACAACATACAGACATTT 59.050 41.667 0.00 0.00 38.99 2.32
3464 6723 4.018506 TGGGGATGACAACATACAGACATT 60.019 41.667 0.00 0.00 38.99 2.71
3465 6724 3.523157 TGGGGATGACAACATACAGACAT 59.477 43.478 0.00 0.00 38.99 3.06
3466 6725 2.909662 TGGGGATGACAACATACAGACA 59.090 45.455 0.00 0.00 38.99 3.41
3467 6726 3.627395 TGGGGATGACAACATACAGAC 57.373 47.619 0.00 0.00 38.99 3.51
3468 6727 3.779738 TCATGGGGATGACAACATACAGA 59.220 43.478 0.00 0.00 38.99 3.41
3469 6728 4.155063 TCATGGGGATGACAACATACAG 57.845 45.455 0.00 0.00 38.99 2.74
3479 6738 1.274126 TGGGTAGTGTCATGGGGATGA 60.274 52.381 0.00 0.00 0.00 2.92
3480 6739 1.134098 GTGGGTAGTGTCATGGGGATG 60.134 57.143 0.00 0.00 0.00 3.51
3481 6740 1.213296 GTGGGTAGTGTCATGGGGAT 58.787 55.000 0.00 0.00 0.00 3.85
3482 6741 0.118346 AGTGGGTAGTGTCATGGGGA 59.882 55.000 0.00 0.00 0.00 4.81
3483 6742 1.874129 TAGTGGGTAGTGTCATGGGG 58.126 55.000 0.00 0.00 0.00 4.96
3484 6743 3.038280 TCATAGTGGGTAGTGTCATGGG 58.962 50.000 0.00 0.00 0.00 4.00
3485 6744 4.443457 CCTTCATAGTGGGTAGTGTCATGG 60.443 50.000 0.00 0.00 0.00 3.66
3486 6745 4.162320 ACCTTCATAGTGGGTAGTGTCATG 59.838 45.833 0.00 0.00 0.00 3.07
3487 6746 4.362677 ACCTTCATAGTGGGTAGTGTCAT 58.637 43.478 0.00 0.00 0.00 3.06
3488 6747 3.786553 ACCTTCATAGTGGGTAGTGTCA 58.213 45.455 0.00 0.00 0.00 3.58
3489 6748 5.517322 CTACCTTCATAGTGGGTAGTGTC 57.483 47.826 9.46 0.00 44.30 3.67
3494 6753 8.284435 AGTAACATACTACCTTCATAGTGGGTA 58.716 37.037 0.00 0.00 37.23 3.69
3495 6754 7.130775 AGTAACATACTACCTTCATAGTGGGT 58.869 38.462 0.00 0.00 37.23 4.51
3496 6755 7.598759 AGTAACATACTACCTTCATAGTGGG 57.401 40.000 0.00 0.00 37.23 4.61
3497 6756 8.142551 GGAAGTAACATACTACCTTCATAGTGG 58.857 40.741 0.00 0.00 38.26 4.00
3498 6757 8.142551 GGGAAGTAACATACTACCTTCATAGTG 58.857 40.741 0.00 0.00 38.26 2.74
3499 6758 7.842743 TGGGAAGTAACATACTACCTTCATAGT 59.157 37.037 10.59 0.00 38.26 2.12
3500 6759 8.142551 GTGGGAAGTAACATACTACCTTCATAG 58.857 40.741 10.59 0.00 38.26 2.23
3501 6760 7.842743 AGTGGGAAGTAACATACTACCTTCATA 59.157 37.037 10.59 0.00 38.26 2.15
3502 6761 6.672657 AGTGGGAAGTAACATACTACCTTCAT 59.327 38.462 10.59 0.00 38.26 2.57
3503 6762 6.021030 AGTGGGAAGTAACATACTACCTTCA 58.979 40.000 10.59 0.00 38.26 3.02
3504 6763 6.541934 AGTGGGAAGTAACATACTACCTTC 57.458 41.667 10.59 0.00 38.26 3.46
3505 6764 7.842743 TCATAGTGGGAAGTAACATACTACCTT 59.157 37.037 10.59 0.00 38.26 3.50
3506 6765 7.287235 GTCATAGTGGGAAGTAACATACTACCT 59.713 40.741 10.59 0.00 38.26 3.08
3507 6766 7.287235 AGTCATAGTGGGAAGTAACATACTACC 59.713 40.741 0.00 4.93 38.26 3.18
3508 6767 8.235359 AGTCATAGTGGGAAGTAACATACTAC 57.765 38.462 0.00 0.00 38.26 2.73
3509 6768 9.570468 CTAGTCATAGTGGGAAGTAACATACTA 57.430 37.037 0.00 0.00 38.26 1.82
3510 6769 7.014422 GCTAGTCATAGTGGGAAGTAACATACT 59.986 40.741 0.00 0.00 41.73 2.12
3511 6770 7.146648 GCTAGTCATAGTGGGAAGTAACATAC 58.853 42.308 0.00 0.00 0.00 2.39
3512 6771 6.267014 GGCTAGTCATAGTGGGAAGTAACATA 59.733 42.308 0.00 0.00 0.00 2.29
3513 6772 5.070580 GGCTAGTCATAGTGGGAAGTAACAT 59.929 44.000 0.00 0.00 0.00 2.71
3514 6773 4.404715 GGCTAGTCATAGTGGGAAGTAACA 59.595 45.833 0.00 0.00 0.00 2.41
3515 6774 4.650131 AGGCTAGTCATAGTGGGAAGTAAC 59.350 45.833 0.00 0.00 0.00 2.50
3516 6775 4.880164 AGGCTAGTCATAGTGGGAAGTAA 58.120 43.478 0.00 0.00 0.00 2.24
3517 6776 4.537945 AGGCTAGTCATAGTGGGAAGTA 57.462 45.455 0.00 0.00 0.00 2.24
3518 6777 3.406512 AGGCTAGTCATAGTGGGAAGT 57.593 47.619 0.00 0.00 0.00 3.01
3519 6778 3.742640 GCAAGGCTAGTCATAGTGGGAAG 60.743 52.174 0.00 0.00 0.00 3.46
3520 6779 2.170607 GCAAGGCTAGTCATAGTGGGAA 59.829 50.000 0.00 0.00 0.00 3.97
3521 6780 1.762957 GCAAGGCTAGTCATAGTGGGA 59.237 52.381 0.00 0.00 0.00 4.37
3522 6781 1.765314 AGCAAGGCTAGTCATAGTGGG 59.235 52.381 0.00 0.00 36.99 4.61
3523 6782 3.550437 AAGCAAGGCTAGTCATAGTGG 57.450 47.619 0.00 0.00 38.25 4.00
3524 6783 4.764172 AGAAAGCAAGGCTAGTCATAGTG 58.236 43.478 0.00 0.00 38.25 2.74
3525 6784 5.428184 AAGAAAGCAAGGCTAGTCATAGT 57.572 39.130 0.00 0.00 38.25 2.12
3526 6785 5.006165 CGAAAGAAAGCAAGGCTAGTCATAG 59.994 44.000 0.00 0.00 38.25 2.23
3527 6786 4.870426 CGAAAGAAAGCAAGGCTAGTCATA 59.130 41.667 0.00 0.00 38.25 2.15
3528 6787 3.686726 CGAAAGAAAGCAAGGCTAGTCAT 59.313 43.478 0.00 0.00 38.25 3.06
3529 6788 3.067106 CGAAAGAAAGCAAGGCTAGTCA 58.933 45.455 0.00 0.00 38.25 3.41
3530 6789 3.067833 ACGAAAGAAAGCAAGGCTAGTC 58.932 45.455 0.00 0.00 38.25 2.59
3531 6790 2.808543 CACGAAAGAAAGCAAGGCTAGT 59.191 45.455 0.00 0.00 38.25 2.57
3532 6791 2.808543 ACACGAAAGAAAGCAAGGCTAG 59.191 45.455 0.00 0.00 38.25 3.42
3533 6792 2.846193 ACACGAAAGAAAGCAAGGCTA 58.154 42.857 0.00 0.00 38.25 3.93
3534 6793 1.680338 ACACGAAAGAAAGCAAGGCT 58.320 45.000 0.00 0.00 42.56 4.58
3535 6794 3.058224 ACATACACGAAAGAAAGCAAGGC 60.058 43.478 0.00 0.00 0.00 4.35
3536 6795 4.749245 ACATACACGAAAGAAAGCAAGG 57.251 40.909 0.00 0.00 0.00 3.61
3537 6796 4.379793 GCAACATACACGAAAGAAAGCAAG 59.620 41.667 0.00 0.00 0.00 4.01
3538 6797 4.201960 TGCAACATACACGAAAGAAAGCAA 60.202 37.500 0.00 0.00 0.00 3.91
3539 6798 3.313803 TGCAACATACACGAAAGAAAGCA 59.686 39.130 0.00 0.00 0.00 3.91
3540 6799 3.884169 TGCAACATACACGAAAGAAAGC 58.116 40.909 0.00 0.00 0.00 3.51
3541 6800 8.577939 CATTAATGCAACATACACGAAAGAAAG 58.422 33.333 1.74 0.00 0.00 2.62
3542 6801 8.446489 CATTAATGCAACATACACGAAAGAAA 57.554 30.769 1.74 0.00 0.00 2.52
3560 6819 6.897259 AACTAAAGCATGCAAGCATTAATG 57.103 33.333 21.98 11.27 36.85 1.90
3561 6820 7.603404 TCAAAACTAAAGCATGCAAGCATTAAT 59.397 29.630 21.98 1.50 36.85 1.40
3562 6821 6.927936 TCAAAACTAAAGCATGCAAGCATTAA 59.072 30.769 21.98 0.00 36.85 1.40
3563 6822 6.453943 TCAAAACTAAAGCATGCAAGCATTA 58.546 32.000 21.98 13.63 36.85 1.90
3564 6823 5.299148 TCAAAACTAAAGCATGCAAGCATT 58.701 33.333 21.98 13.17 36.85 3.56
3565 6824 4.885413 TCAAAACTAAAGCATGCAAGCAT 58.115 34.783 21.98 0.07 36.85 3.79
3566 6825 4.300803 CTCAAAACTAAAGCATGCAAGCA 58.699 39.130 21.98 0.00 36.85 3.91
3567 6826 3.676646 CCTCAAAACTAAAGCATGCAAGC 59.323 43.478 21.98 5.62 0.00 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.