Multiple sequence alignment - TraesCS1D01G238600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G238600 chr1D 100.000 6814 0 0 1 6814 328103959 328097146 0.000000e+00 12584.0
1 TraesCS1D01G238600 chr1D 85.714 203 27 2 6613 6814 321505919 321506120 5.350000e-51 213.0
2 TraesCS1D01G238600 chr1D 80.800 125 22 2 4529 4651 480394073 480394197 5.630000e-16 97.1
3 TraesCS1D01G238600 chr1B 96.833 4137 101 20 2252 6368 442180052 442175926 0.000000e+00 6887.0
4 TraesCS1D01G238600 chr1B 94.545 1540 61 6 682 2214 442181575 442180052 0.000000e+00 2357.0
5 TraesCS1D01G238600 chr1B 89.004 482 40 6 222 695 442189843 442189367 9.850000e-163 584.0
6 TraesCS1D01G238600 chr1B 86.937 222 23 4 6597 6814 652046505 652046724 1.900000e-60 244.0
7 TraesCS1D01G238600 chr1B 84.018 219 32 3 6597 6814 670728230 670728014 2.490000e-49 207.0
8 TraesCS1D01G238600 chr1B 86.131 137 17 2 3611 3746 80778770 80778635 5.510000e-31 147.0
9 TraesCS1D01G238600 chr1A 96.094 2688 85 9 743 3411 407329257 407326571 0.000000e+00 4364.0
10 TraesCS1D01G238600 chr1A 96.499 2428 74 8 3948 6368 407325830 407323407 0.000000e+00 4002.0
11 TraesCS1D01G238600 chr1A 96.455 536 18 1 3406 3941 407326531 407325997 0.000000e+00 883.0
12 TraesCS1D01G238600 chr1A 85.502 538 36 13 212 727 407330005 407329488 2.180000e-144 523.0
13 TraesCS1D01G238600 chr1A 80.259 309 27 10 6508 6814 407323408 407323132 1.160000e-47 202.0
14 TraesCS1D01G238600 chr1A 85.542 83 11 1 4589 4671 538407231 538407312 1.220000e-12 86.1
15 TraesCS1D01G238600 chr6A 88.557 201 21 2 6597 6796 542196790 542196591 6.830000e-60 243.0
16 TraesCS1D01G238600 chr2B 87.374 198 24 1 6597 6793 696676476 696676673 6.880000e-55 226.0
17 TraesCS1D01G238600 chrUn 85.388 219 29 2 6597 6814 68802074 68802290 2.470000e-54 224.0
18 TraesCS1D01G238600 chrUn 89.231 130 13 1 3617 3746 433818964 433818836 1.970000e-35 161.0
19 TraesCS1D01G238600 chr7D 92.617 149 10 1 5030 5177 436961945 436961797 5.350000e-51 213.0
20 TraesCS1D01G238600 chr7D 81.757 148 25 1 6364 6509 546753932 546753785 9.280000e-24 122.0
21 TraesCS1D01G238600 chr7B 92.617 149 10 1 5030 5177 453623440 453623292 5.350000e-51 213.0
22 TraesCS1D01G238600 chr7A 91.613 155 12 1 5024 5177 462978743 462978589 5.350000e-51 213.0
23 TraesCS1D01G238600 chr7A 82.629 213 29 6 6597 6803 173642121 173641911 1.510000e-41 182.0
24 TraesCS1D01G238600 chr7A 80.986 142 25 2 6364 6503 630035200 630035059 2.010000e-20 111.0
25 TraesCS1D01G238600 chr5B 92.053 151 12 0 5027 5177 98663178 98663328 5.350000e-51 213.0
26 TraesCS1D01G238600 chr5B 78.981 157 31 2 4530 4685 21728255 21728410 9.350000e-19 106.0
27 TraesCS1D01G238600 chr5A 91.026 156 13 1 5023 5177 86662014 86662169 6.920000e-50 209.0
28 TraesCS1D01G238600 chr5A 88.235 136 15 1 3611 3746 706872272 706872138 1.970000e-35 161.0
29 TraesCS1D01G238600 chr5D 91.333 150 13 0 5027 5176 277561454 277561603 8.960000e-49 206.0
30 TraesCS1D01G238600 chr5D 79.605 152 24 7 4538 4685 539145787 539145639 1.210000e-17 102.0
31 TraesCS1D01G238600 chr2D 90.909 154 13 1 5025 5177 88290210 88290057 8.960000e-49 206.0
32 TraesCS1D01G238600 chr2D 81.735 219 31 8 6597 6814 42732518 42732728 2.530000e-39 174.0
33 TraesCS1D01G238600 chr2D 78.912 147 28 3 4530 4674 157035415 157035560 5.630000e-16 97.1
34 TraesCS1D01G238600 chr2A 83.178 214 33 3 6597 6808 733147403 733147615 6.970000e-45 193.0
35 TraesCS1D01G238600 chr4A 80.556 144 26 2 6360 6502 612051459 612051317 7.230000e-20 110.0
36 TraesCS1D01G238600 chr4B 80.000 135 23 4 4539 4672 644241745 644241614 5.630000e-16 97.1
37 TraesCS1D01G238600 chr3A 77.358 159 29 6 4531 4685 690435870 690435715 3.390000e-13 87.9
38 TraesCS1D01G238600 chr3B 81.188 101 13 4 4530 4625 817063773 817063674 7.330000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G238600 chr1D 328097146 328103959 6813 True 12584.0 12584 100.0000 1 6814 1 chr1D.!!$R1 6813
1 TraesCS1D01G238600 chr1B 442175926 442181575 5649 True 4622.0 6887 95.6890 682 6368 2 chr1B.!!$R4 5686
2 TraesCS1D01G238600 chr1A 407323132 407330005 6873 True 1994.8 4364 90.9618 212 6814 5 chr1A.!!$R1 6602

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
206 207 0.179207 GCTTTTACCACGCTTACCGC 60.179 55.0 0.00 0.00 41.76 5.68 F
982 1235 0.252103 ACGCTGAGGAAGGGGAAGTA 60.252 55.0 0.00 0.00 43.07 2.24 F
1978 2231 0.879090 GTAGGCTTTGGTGGTTTCCG 59.121 55.0 0.00 0.00 0.00 4.30 F
3178 3434 0.810823 TCGGTTGAACACGGACCAAC 60.811 55.0 0.00 0.00 39.38 3.77 F
3879 4192 0.534873 AAACAGTTTGGGTGTGGCAC 59.465 50.0 11.55 11.55 0.00 5.01 F
5178 5654 0.460311 AATAGTGAACGGAGGGAGCG 59.540 55.0 0.00 0.00 0.00 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1647 1900 0.367887 GATTGACGCCGTTCGGTAAC 59.632 55.000 12.81 5.23 43.86 2.50 R
1981 2234 0.819259 GCTTGAAGTGAGTGCCACCA 60.819 55.000 0.00 0.00 46.87 4.17 R
3195 3451 1.371558 GCGTTCAGGTCTGGAAGGT 59.628 57.895 0.00 0.00 33.81 3.50 R
4706 5179 1.238625 TTTGACCGTCGATTTGGCCC 61.239 55.000 0.00 0.00 0.00 5.80 R
5337 5813 3.211045 TCAATCAGTATTTAAGCGGCCC 58.789 45.455 0.00 0.00 0.00 5.80 R
6474 6957 0.032017 AGGACCTCCGCTCCATAACT 60.032 55.000 0.00 0.00 42.08 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.768957 AATGACATCATCGAGTCTAATAATGG 57.231 34.615 4.43 0.00 35.10 3.16
28 29 6.691508 TGACATCATCGAGTCTAATAATGGG 58.308 40.000 4.43 0.00 35.81 4.00
29 30 6.042638 ACATCATCGAGTCTAATAATGGGG 57.957 41.667 0.00 0.00 0.00 4.96
30 31 5.046304 ACATCATCGAGTCTAATAATGGGGG 60.046 44.000 0.00 0.00 0.00 5.40
31 32 4.489737 TCATCGAGTCTAATAATGGGGGT 58.510 43.478 0.00 0.00 0.00 4.95
32 33 5.647230 TCATCGAGTCTAATAATGGGGGTA 58.353 41.667 0.00 0.00 0.00 3.69
33 34 6.079336 TCATCGAGTCTAATAATGGGGGTAA 58.921 40.000 0.00 0.00 0.00 2.85
34 35 5.796424 TCGAGTCTAATAATGGGGGTAAC 57.204 43.478 0.00 0.00 0.00 2.50
35 36 5.461327 TCGAGTCTAATAATGGGGGTAACT 58.539 41.667 0.00 0.00 0.00 2.24
36 37 5.303589 TCGAGTCTAATAATGGGGGTAACTG 59.696 44.000 0.00 0.00 0.00 3.16
37 38 5.303589 CGAGTCTAATAATGGGGGTAACTGA 59.696 44.000 0.00 0.00 0.00 3.41
38 39 6.183360 CGAGTCTAATAATGGGGGTAACTGAA 60.183 42.308 0.00 0.00 0.00 3.02
39 40 6.896883 AGTCTAATAATGGGGGTAACTGAAC 58.103 40.000 0.00 0.00 0.00 3.18
40 41 6.060136 GTCTAATAATGGGGGTAACTGAACC 58.940 44.000 0.00 0.00 38.94 3.62
41 42 4.957606 AATAATGGGGGTAACTGAACCA 57.042 40.909 6.35 0.00 41.67 3.67
42 43 2.597578 AATGGGGGTAACTGAACCAC 57.402 50.000 6.35 2.71 42.69 4.16
43 44 1.451449 ATGGGGGTAACTGAACCACA 58.549 50.000 8.13 0.00 45.47 4.17
44 45 1.451449 TGGGGGTAACTGAACCACAT 58.549 50.000 8.13 0.00 45.47 3.21
45 46 2.633692 TGGGGGTAACTGAACCACATA 58.366 47.619 8.13 0.00 45.47 2.29
46 47 2.306512 TGGGGGTAACTGAACCACATAC 59.693 50.000 8.13 0.00 45.47 2.39
47 48 2.306512 GGGGGTAACTGAACCACATACA 59.693 50.000 8.13 0.00 45.47 2.29
48 49 3.340928 GGGGTAACTGAACCACATACAC 58.659 50.000 6.35 0.00 42.96 2.90
49 50 3.244630 GGGGTAACTGAACCACATACACA 60.245 47.826 6.35 0.00 42.96 3.72
50 51 4.391155 GGGTAACTGAACCACATACACAA 58.609 43.478 6.35 0.00 41.67 3.33
51 52 4.822896 GGGTAACTGAACCACATACACAAA 59.177 41.667 6.35 0.00 41.67 2.83
52 53 5.299782 GGGTAACTGAACCACATACACAAAA 59.700 40.000 6.35 0.00 41.67 2.44
53 54 6.183360 GGGTAACTGAACCACATACACAAAAA 60.183 38.462 6.35 0.00 41.67 1.94
54 55 6.693978 GGTAACTGAACCACATACACAAAAAC 59.306 38.462 0.00 0.00 39.50 2.43
55 56 5.906113 ACTGAACCACATACACAAAAACA 57.094 34.783 0.00 0.00 0.00 2.83
56 57 6.274157 ACTGAACCACATACACAAAAACAA 57.726 33.333 0.00 0.00 0.00 2.83
57 58 6.096695 ACTGAACCACATACACAAAAACAAC 58.903 36.000 0.00 0.00 0.00 3.32
58 59 5.411781 TGAACCACATACACAAAAACAACC 58.588 37.500 0.00 0.00 0.00 3.77
59 60 5.047306 TGAACCACATACACAAAAACAACCA 60.047 36.000 0.00 0.00 0.00 3.67
60 61 5.606348 ACCACATACACAAAAACAACCAT 57.394 34.783 0.00 0.00 0.00 3.55
61 62 6.716934 ACCACATACACAAAAACAACCATA 57.283 33.333 0.00 0.00 0.00 2.74
62 63 7.113658 ACCACATACACAAAAACAACCATAA 57.886 32.000 0.00 0.00 0.00 1.90
63 64 7.556844 ACCACATACACAAAAACAACCATAAA 58.443 30.769 0.00 0.00 0.00 1.40
64 65 7.492994 ACCACATACACAAAAACAACCATAAAC 59.507 33.333 0.00 0.00 0.00 2.01
65 66 7.492669 CCACATACACAAAAACAACCATAAACA 59.507 33.333 0.00 0.00 0.00 2.83
66 67 8.873830 CACATACACAAAAACAACCATAAACAA 58.126 29.630 0.00 0.00 0.00 2.83
67 68 9.436957 ACATACACAAAAACAACCATAAACAAA 57.563 25.926 0.00 0.00 0.00 2.83
70 71 8.329203 ACACAAAAACAACCATAAACAAATGT 57.671 26.923 0.00 0.00 0.00 2.71
71 72 8.233190 ACACAAAAACAACCATAAACAAATGTG 58.767 29.630 0.00 0.00 38.23 3.21
72 73 8.446273 CACAAAAACAACCATAAACAAATGTGA 58.554 29.630 0.00 0.00 35.23 3.58
73 74 8.663911 ACAAAAACAACCATAAACAAATGTGAG 58.336 29.630 0.00 0.00 0.00 3.51
74 75 8.877779 CAAAAACAACCATAAACAAATGTGAGA 58.122 29.630 0.00 0.00 0.00 3.27
75 76 8.419076 AAAACAACCATAAACAAATGTGAGAC 57.581 30.769 0.00 0.00 0.00 3.36
76 77 6.959639 ACAACCATAAACAAATGTGAGACT 57.040 33.333 0.00 0.00 0.00 3.24
77 78 8.458573 AACAACCATAAACAAATGTGAGACTA 57.541 30.769 0.00 0.00 0.00 2.59
78 79 7.871853 ACAACCATAAACAAATGTGAGACTAC 58.128 34.615 0.00 0.00 0.00 2.73
79 80 7.500892 ACAACCATAAACAAATGTGAGACTACA 59.499 33.333 0.00 0.00 34.63 2.74
80 81 8.349245 CAACCATAAACAAATGTGAGACTACAA 58.651 33.333 0.00 0.00 33.69 2.41
81 82 7.871853 ACCATAAACAAATGTGAGACTACAAC 58.128 34.615 0.00 0.00 33.69 3.32
82 83 7.040686 ACCATAAACAAATGTGAGACTACAACC 60.041 37.037 0.00 0.00 33.69 3.77
83 84 7.040755 CCATAAACAAATGTGAGACTACAACCA 60.041 37.037 0.00 0.00 33.69 3.67
84 85 5.751243 AACAAATGTGAGACTACAACCAC 57.249 39.130 0.00 0.00 33.69 4.16
85 86 3.807622 ACAAATGTGAGACTACAACCACG 59.192 43.478 0.00 0.00 33.69 4.94
86 87 4.055360 CAAATGTGAGACTACAACCACGA 58.945 43.478 0.00 0.00 33.69 4.35
87 88 4.330944 AATGTGAGACTACAACCACGAA 57.669 40.909 0.00 0.00 33.69 3.85
88 89 3.088194 TGTGAGACTACAACCACGAAC 57.912 47.619 0.00 0.00 32.58 3.95
89 90 2.049228 GTGAGACTACAACCACGAACG 58.951 52.381 0.00 0.00 0.00 3.95
90 91 1.058404 GAGACTACAACCACGAACGC 58.942 55.000 0.00 0.00 0.00 4.84
91 92 0.662374 AGACTACAACCACGAACGCG 60.662 55.000 3.53 3.53 44.79 6.01
101 102 2.733218 CGAACGCGTGCCTCAAGA 60.733 61.111 14.98 0.00 0.00 3.02
102 103 2.307309 CGAACGCGTGCCTCAAGAA 61.307 57.895 14.98 0.00 0.00 2.52
103 104 1.626654 CGAACGCGTGCCTCAAGAAT 61.627 55.000 14.98 0.00 0.00 2.40
104 105 0.517316 GAACGCGTGCCTCAAGAATT 59.483 50.000 14.98 0.00 0.00 2.17
105 106 0.517316 AACGCGTGCCTCAAGAATTC 59.483 50.000 14.98 0.00 0.00 2.17
106 107 1.298859 ACGCGTGCCTCAAGAATTCC 61.299 55.000 12.93 0.00 0.00 3.01
107 108 1.425428 GCGTGCCTCAAGAATTCCG 59.575 57.895 0.65 0.00 0.00 4.30
108 109 1.298859 GCGTGCCTCAAGAATTCCGT 61.299 55.000 0.65 0.00 0.00 4.69
109 110 0.721718 CGTGCCTCAAGAATTCCGTC 59.278 55.000 0.65 0.00 0.00 4.79
110 111 1.808411 GTGCCTCAAGAATTCCGTCA 58.192 50.000 0.65 0.00 0.00 4.35
111 112 2.151202 GTGCCTCAAGAATTCCGTCAA 58.849 47.619 0.65 0.00 0.00 3.18
112 113 2.552315 GTGCCTCAAGAATTCCGTCAAA 59.448 45.455 0.65 0.00 0.00 2.69
113 114 3.004315 GTGCCTCAAGAATTCCGTCAAAA 59.996 43.478 0.65 0.00 0.00 2.44
114 115 3.004315 TGCCTCAAGAATTCCGTCAAAAC 59.996 43.478 0.65 0.00 0.00 2.43
115 116 3.253432 GCCTCAAGAATTCCGTCAAAACT 59.747 43.478 0.65 0.00 0.00 2.66
116 117 4.787598 CCTCAAGAATTCCGTCAAAACTG 58.212 43.478 0.65 0.00 0.00 3.16
117 118 4.222114 CTCAAGAATTCCGTCAAAACTGC 58.778 43.478 0.65 0.00 0.00 4.40
118 119 3.629855 TCAAGAATTCCGTCAAAACTGCA 59.370 39.130 0.65 0.00 0.00 4.41
119 120 4.278170 TCAAGAATTCCGTCAAAACTGCAT 59.722 37.500 0.65 0.00 0.00 3.96
120 121 4.425577 AGAATTCCGTCAAAACTGCATC 57.574 40.909 0.65 0.00 0.00 3.91
121 122 3.191371 AGAATTCCGTCAAAACTGCATCC 59.809 43.478 0.65 0.00 0.00 3.51
122 123 2.270352 TTCCGTCAAAACTGCATCCT 57.730 45.000 0.00 0.00 0.00 3.24
123 124 3.410631 TTCCGTCAAAACTGCATCCTA 57.589 42.857 0.00 0.00 0.00 2.94
124 125 3.410631 TCCGTCAAAACTGCATCCTAA 57.589 42.857 0.00 0.00 0.00 2.69
125 126 3.071479 TCCGTCAAAACTGCATCCTAAC 58.929 45.455 0.00 0.00 0.00 2.34
126 127 3.074412 CCGTCAAAACTGCATCCTAACT 58.926 45.455 0.00 0.00 0.00 2.24
127 128 3.502211 CCGTCAAAACTGCATCCTAACTT 59.498 43.478 0.00 0.00 0.00 2.66
128 129 4.693566 CCGTCAAAACTGCATCCTAACTTA 59.306 41.667 0.00 0.00 0.00 2.24
129 130 5.354234 CCGTCAAAACTGCATCCTAACTTAT 59.646 40.000 0.00 0.00 0.00 1.73
130 131 6.456988 CCGTCAAAACTGCATCCTAACTTATC 60.457 42.308 0.00 0.00 0.00 1.75
131 132 6.092122 CGTCAAAACTGCATCCTAACTTATCA 59.908 38.462 0.00 0.00 0.00 2.15
132 133 7.201644 CGTCAAAACTGCATCCTAACTTATCAT 60.202 37.037 0.00 0.00 0.00 2.45
133 134 8.125448 GTCAAAACTGCATCCTAACTTATCATC 58.875 37.037 0.00 0.00 0.00 2.92
134 135 6.851222 AAACTGCATCCTAACTTATCATCG 57.149 37.500 0.00 0.00 0.00 3.84
135 136 5.537300 ACTGCATCCTAACTTATCATCGT 57.463 39.130 0.00 0.00 0.00 3.73
136 137 5.918608 ACTGCATCCTAACTTATCATCGTT 58.081 37.500 0.00 0.00 0.00 3.85
137 138 5.755375 ACTGCATCCTAACTTATCATCGTTG 59.245 40.000 0.00 0.00 0.00 4.10
138 139 5.056480 TGCATCCTAACTTATCATCGTTGG 58.944 41.667 0.00 0.00 0.00 3.77
139 140 5.057149 GCATCCTAACTTATCATCGTTGGT 58.943 41.667 0.00 0.00 0.00 3.67
140 141 5.177696 GCATCCTAACTTATCATCGTTGGTC 59.822 44.000 0.00 0.00 0.00 4.02
141 142 5.925506 TCCTAACTTATCATCGTTGGTCA 57.074 39.130 0.00 0.00 0.00 4.02
142 143 5.657474 TCCTAACTTATCATCGTTGGTCAC 58.343 41.667 0.00 0.00 0.00 3.67
143 144 4.809426 CCTAACTTATCATCGTTGGTCACC 59.191 45.833 0.00 0.00 0.00 4.02
144 145 3.973206 ACTTATCATCGTTGGTCACCA 57.027 42.857 0.00 0.00 0.00 4.17
145 146 4.487714 ACTTATCATCGTTGGTCACCAT 57.512 40.909 0.00 0.00 31.53 3.55
146 147 5.607939 ACTTATCATCGTTGGTCACCATA 57.392 39.130 0.00 0.00 31.53 2.74
147 148 5.601662 ACTTATCATCGTTGGTCACCATAG 58.398 41.667 0.00 0.00 31.53 2.23
148 149 5.128827 ACTTATCATCGTTGGTCACCATAGT 59.871 40.000 0.00 0.00 31.53 2.12
149 150 3.973206 TCATCGTTGGTCACCATAGTT 57.027 42.857 0.00 0.00 31.53 2.24
150 151 3.857052 TCATCGTTGGTCACCATAGTTC 58.143 45.455 0.00 0.00 31.53 3.01
151 152 3.513912 TCATCGTTGGTCACCATAGTTCT 59.486 43.478 0.00 0.00 31.53 3.01
152 153 3.313012 TCGTTGGTCACCATAGTTCTG 57.687 47.619 0.00 0.00 31.53 3.02
153 154 1.732259 CGTTGGTCACCATAGTTCTGC 59.268 52.381 0.00 0.00 31.53 4.26
154 155 2.612972 CGTTGGTCACCATAGTTCTGCT 60.613 50.000 0.00 0.00 31.53 4.24
155 156 2.744202 GTTGGTCACCATAGTTCTGCTG 59.256 50.000 0.00 0.00 31.53 4.41
156 157 1.278985 TGGTCACCATAGTTCTGCTGG 59.721 52.381 0.00 0.00 36.09 4.85
157 158 1.279271 GGTCACCATAGTTCTGCTGGT 59.721 52.381 0.00 3.98 44.02 4.00
162 163 4.679373 ACCATAGTTCTGCTGGTGATAG 57.321 45.455 7.69 0.00 41.65 2.08
163 164 4.290093 ACCATAGTTCTGCTGGTGATAGA 58.710 43.478 7.69 0.00 41.65 1.98
164 165 4.100189 ACCATAGTTCTGCTGGTGATAGAC 59.900 45.833 7.69 0.00 41.65 2.59
165 166 4.343526 CCATAGTTCTGCTGGTGATAGACT 59.656 45.833 0.00 0.00 0.00 3.24
166 167 5.163364 CCATAGTTCTGCTGGTGATAGACTT 60.163 44.000 0.00 0.00 0.00 3.01
167 168 4.899352 AGTTCTGCTGGTGATAGACTTT 57.101 40.909 0.00 0.00 0.00 2.66
168 169 5.234466 AGTTCTGCTGGTGATAGACTTTT 57.766 39.130 0.00 0.00 0.00 2.27
169 170 5.625150 AGTTCTGCTGGTGATAGACTTTTT 58.375 37.500 0.00 0.00 0.00 1.94
195 196 7.945033 TTGTCAAATTGAGATTGCTTTTACC 57.055 32.000 0.00 0.00 0.00 2.85
196 197 7.048629 TGTCAAATTGAGATTGCTTTTACCA 57.951 32.000 0.00 0.00 0.00 3.25
197 198 6.922957 TGTCAAATTGAGATTGCTTTTACCAC 59.077 34.615 0.00 0.00 0.00 4.16
198 199 6.088085 GTCAAATTGAGATTGCTTTTACCACG 59.912 38.462 0.00 0.00 0.00 4.94
199 200 3.552604 TTGAGATTGCTTTTACCACGC 57.447 42.857 0.00 0.00 0.00 5.34
200 201 2.778299 TGAGATTGCTTTTACCACGCT 58.222 42.857 0.00 0.00 0.00 5.07
201 202 3.146066 TGAGATTGCTTTTACCACGCTT 58.854 40.909 0.00 0.00 0.00 4.68
202 203 4.320023 TGAGATTGCTTTTACCACGCTTA 58.680 39.130 0.00 0.00 0.00 3.09
203 204 4.153475 TGAGATTGCTTTTACCACGCTTAC 59.847 41.667 0.00 0.00 0.00 2.34
204 205 3.439129 AGATTGCTTTTACCACGCTTACC 59.561 43.478 0.00 0.00 0.00 2.85
205 206 1.149987 TGCTTTTACCACGCTTACCG 58.850 50.000 0.00 0.00 44.21 4.02
206 207 0.179207 GCTTTTACCACGCTTACCGC 60.179 55.000 0.00 0.00 41.76 5.68
243 244 9.904198 TGGTGATAGATAACATCAAGAAATTCA 57.096 29.630 0.00 0.00 34.32 2.57
265 266 8.498054 TTCAACCATTGAAATACTTGCAAAAA 57.502 26.923 0.00 0.00 45.94 1.94
268 269 6.591001 ACCATTGAAATACTTGCAAAAACCT 58.409 32.000 0.00 0.00 0.00 3.50
306 307 6.683715 TCTTCGTTGAGTCATGTGTATAACA 58.316 36.000 0.00 0.00 44.79 2.41
329 330 7.409697 ACAAGATTGACAATCGCACATTATAC 58.590 34.615 19.87 0.00 42.75 1.47
331 332 8.764287 CAAGATTGACAATCGCACATTATACTA 58.236 33.333 19.87 0.00 42.75 1.82
337 338 5.012664 ACAATCGCACATTATACTATGGGGA 59.987 40.000 0.00 0.00 29.40 4.81
356 357 2.041216 GGACACCACCCTGATTTAGGTT 59.959 50.000 0.00 0.00 45.80 3.50
358 359 2.714250 ACACCACCCTGATTTAGGTTGA 59.286 45.455 0.00 0.00 41.27 3.18
378 379 1.000163 ACAGTCGACAAGTAGCACCAG 60.000 52.381 19.50 0.00 0.00 4.00
385 386 1.072331 ACAAGTAGCACCAGTCAAGGG 59.928 52.381 0.00 0.00 0.00 3.95
400 401 1.067295 AAGGGTGATGACCTTGCTCA 58.933 50.000 0.00 0.00 46.21 4.26
421 422 3.633986 CACAAAGGCTTGAAAGAAGGAGT 59.366 43.478 0.00 0.00 36.33 3.85
424 425 5.891551 ACAAAGGCTTGAAAGAAGGAGTTAA 59.108 36.000 0.00 0.00 36.33 2.01
443 444 6.750148 AGTTAATGAAGGTGACGAGGATATC 58.250 40.000 0.00 0.00 0.00 1.63
467 468 2.714250 GGATAATACCCATGGACCCACA 59.286 50.000 15.22 0.00 0.00 4.17
519 520 2.367567 TCTAAACTCCTCAACAACGCCT 59.632 45.455 0.00 0.00 0.00 5.52
522 523 0.687354 ACTCCTCAACAACGCCTGAT 59.313 50.000 0.00 0.00 0.00 2.90
530 531 1.133253 CAACGCCTGATCAAGTGCG 59.867 57.895 24.10 24.10 45.45 5.34
531 532 2.343758 ACGCCTGATCAAGTGCGT 59.656 55.556 25.13 25.13 46.87 5.24
532 533 2.780643 CGCCTGATCAAGTGCGTG 59.219 61.111 19.92 0.00 39.37 5.34
533 534 1.737735 CGCCTGATCAAGTGCGTGA 60.738 57.895 19.92 0.00 39.37 4.35
534 535 1.291184 CGCCTGATCAAGTGCGTGAA 61.291 55.000 19.92 0.00 39.37 3.18
536 537 1.135859 GCCTGATCAAGTGCGTGAAAG 60.136 52.381 0.00 0.00 0.00 2.62
537 538 2.146342 CCTGATCAAGTGCGTGAAAGT 58.854 47.619 0.00 0.00 0.00 2.66
539 540 3.548587 CTGATCAAGTGCGTGAAAGTTG 58.451 45.455 0.00 0.00 0.00 3.16
540 541 3.202097 TGATCAAGTGCGTGAAAGTTGA 58.798 40.909 0.00 0.00 40.34 3.18
541 542 3.248363 TGATCAAGTGCGTGAAAGTTGAG 59.752 43.478 0.00 0.00 39.63 3.02
542 543 2.627945 TCAAGTGCGTGAAAGTTGAGT 58.372 42.857 0.00 0.00 33.17 3.41
552 563 4.332819 CGTGAAAGTTGAGTTGAGGACTTT 59.667 41.667 0.44 0.44 43.00 2.66
565 576 0.317854 GGACTTTGAAGCAACACCGC 60.318 55.000 0.00 0.00 0.00 5.68
574 585 4.101790 CAACACCGCCATCACCGC 62.102 66.667 0.00 0.00 0.00 5.68
576 587 2.949909 AACACCGCCATCACCGCTA 61.950 57.895 0.00 0.00 0.00 4.26
581 592 2.501128 GCCATCACCGCTAGAGCA 59.499 61.111 1.89 0.00 42.21 4.26
586 597 1.863454 CATCACCGCTAGAGCAATGTC 59.137 52.381 1.89 0.00 42.21 3.06
587 598 0.894835 TCACCGCTAGAGCAATGTCA 59.105 50.000 1.89 0.00 42.21 3.58
591 602 1.002366 CGCTAGAGCAATGTCACCAC 58.998 55.000 1.89 0.00 42.21 4.16
602 613 1.647084 GTCACCACGACACCAAAGC 59.353 57.895 0.00 0.00 44.69 3.51
603 614 1.525077 TCACCACGACACCAAAGCC 60.525 57.895 0.00 0.00 0.00 4.35
604 615 2.590575 ACCACGACACCAAAGCCG 60.591 61.111 0.00 0.00 0.00 5.52
605 616 2.280524 CCACGACACCAAAGCCGA 60.281 61.111 0.00 0.00 0.00 5.54
606 617 1.890041 CCACGACACCAAAGCCGAA 60.890 57.895 0.00 0.00 0.00 4.30
607 618 1.278637 CACGACACCAAAGCCGAAC 59.721 57.895 0.00 0.00 0.00 3.95
608 619 1.153329 ACGACACCAAAGCCGAACA 60.153 52.632 0.00 0.00 0.00 3.18
609 620 0.745128 ACGACACCAAAGCCGAACAA 60.745 50.000 0.00 0.00 0.00 2.83
610 621 0.378962 CGACACCAAAGCCGAACAAA 59.621 50.000 0.00 0.00 0.00 2.83
611 622 1.202200 CGACACCAAAGCCGAACAAAA 60.202 47.619 0.00 0.00 0.00 2.44
612 623 2.732597 CGACACCAAAGCCGAACAAAAA 60.733 45.455 0.00 0.00 0.00 1.94
637 648 8.608844 AAGATCTTACTACACAACAAAAGAGG 57.391 34.615 6.06 0.00 0.00 3.69
690 713 7.402650 AGGGGAGATTGATCTGGAATATAAGAG 59.597 40.741 0.00 0.00 37.25 2.85
810 1050 8.887036 TGCCACATAAAGTAGATACACTAATG 57.113 34.615 0.00 0.00 32.49 1.90
913 1160 5.281558 GGAAAAAGAAATAGAGGAAGGGGGA 60.282 44.000 0.00 0.00 0.00 4.81
952 1205 1.530771 CCCATCTCCTCCAAGCAGG 59.469 63.158 0.00 0.00 39.47 4.85
953 1206 0.984961 CCCATCTCCTCCAAGCAGGA 60.985 60.000 0.00 0.00 46.75 3.86
982 1235 0.252103 ACGCTGAGGAAGGGGAAGTA 60.252 55.000 0.00 0.00 43.07 2.24
1272 1525 6.575162 ATTTGTTCAGTTCTGTCCAATACC 57.425 37.500 0.00 0.00 0.00 2.73
1273 1526 4.974645 TGTTCAGTTCTGTCCAATACCT 57.025 40.909 0.00 0.00 0.00 3.08
1334 1587 2.089980 TCCTACGTTGTCACTAGAGGC 58.910 52.381 0.00 0.00 0.00 4.70
1368 1621 5.006386 AGAAATTCACTCTCCGAAATTGCT 58.994 37.500 0.00 0.00 0.00 3.91
1410 1663 3.585289 TGTAAATCTACTGGGCCTTGACA 59.415 43.478 4.53 0.00 0.00 3.58
1444 1697 7.520119 TCAGTTCATACGCAAAGTTATACTG 57.480 36.000 0.00 0.00 32.78 2.74
1467 1720 3.128589 TCAGTTTGGTCTTGACAGTTTGC 59.871 43.478 3.08 0.00 0.00 3.68
1491 1744 6.570571 GCCCTGGTTCTAGATTTGTTTTTCTC 60.571 42.308 0.00 0.00 0.00 2.87
1524 1777 1.466360 GCAGCTTACGCCAGAAATGTG 60.466 52.381 0.00 0.00 36.60 3.21
1529 1782 2.700722 TACGCCAGAAATGTGCCATA 57.299 45.000 0.00 0.00 0.00 2.74
1531 1784 1.949525 ACGCCAGAAATGTGCCATATC 59.050 47.619 0.00 0.00 0.00 1.63
1564 1817 4.023980 CCTGAACTCCTAGTGTACCATGA 58.976 47.826 0.00 0.00 0.00 3.07
1630 1883 1.392853 GCAGATGCTTCAGAGTTCACG 59.607 52.381 2.07 0.00 38.21 4.35
1647 1900 4.868450 TCACGAACAAAGTTGGTGTTAG 57.132 40.909 19.49 4.24 39.29 2.34
1651 1904 5.961263 CACGAACAAAGTTGGTGTTAGTTAC 59.039 40.000 14.33 0.00 41.15 2.50
1777 2030 6.226272 AGGAACCTGGATAGATCTAGACAT 57.774 41.667 8.70 0.00 37.57 3.06
1962 2215 2.715749 TGGGTGCATGAGAATGGTAG 57.284 50.000 0.00 0.00 0.00 3.18
1978 2231 0.879090 GTAGGCTTTGGTGGTTTCCG 59.121 55.000 0.00 0.00 0.00 4.30
1981 2234 1.830847 GCTTTGGTGGTTTCCGGGT 60.831 57.895 0.00 0.00 0.00 5.28
2110 2364 8.727100 TGGTCTGATCCTTGTATATCTTGTAT 57.273 34.615 0.00 0.00 0.00 2.29
2176 2430 7.043590 GCATTGTCAACTTTGATCTGATATTGC 60.044 37.037 8.61 8.61 39.73 3.56
2180 2434 5.824624 TCAACTTTGATCTGATATTGCTCCC 59.175 40.000 0.00 0.00 31.01 4.30
2230 2484 7.857885 GCATAAACACCAAATAATAGCAGTCTC 59.142 37.037 0.00 0.00 0.00 3.36
3085 3341 5.452078 TGAATCTTGCCGACAGAAAAATT 57.548 34.783 0.00 0.00 0.00 1.82
3139 3395 3.504906 CAGTGACACTTCTTCATGGCAAT 59.495 43.478 5.04 0.00 35.02 3.56
3178 3434 0.810823 TCGGTTGAACACGGACCAAC 60.811 55.000 0.00 0.00 39.38 3.77
3195 3451 6.460399 CGGACCAACCAAAAATTCAGAAACTA 60.460 38.462 0.00 0.00 38.90 2.24
3465 3777 4.390264 GGCTTACTGGAGTTTTTCTGAGT 58.610 43.478 0.00 0.00 0.00 3.41
3532 3845 7.833285 TTAAGGTTTTTAAAGAGCTGACCAT 57.167 32.000 10.81 0.00 0.00 3.55
3660 3973 2.340328 GGTTGGGATGTGGCGGTTC 61.340 63.158 0.00 0.00 0.00 3.62
3727 4040 7.708752 CGAGAAGAGTTATCTTTTCTGCCTAAT 59.291 37.037 10.47 0.00 45.98 1.73
3879 4192 0.534873 AAACAGTTTGGGTGTGGCAC 59.465 50.000 11.55 11.55 0.00 5.01
4418 4891 8.045507 ACATATCCTAGGTCATATGATTTGCTG 58.954 37.037 26.22 8.71 36.73 4.41
4904 5377 8.549548 GTGATTCATGTTCATCTCACAATAGAG 58.450 37.037 4.78 0.00 34.57 2.43
5132 5608 5.106038 ACTCGTTTCAATCCGTATGTAGTCA 60.106 40.000 0.00 0.00 0.00 3.41
5136 5612 7.433131 TCGTTTCAATCCGTATGTAGTCAATAC 59.567 37.037 0.00 0.00 34.72 1.89
5178 5654 0.460311 AATAGTGAACGGAGGGAGCG 59.540 55.000 0.00 0.00 0.00 5.03
5337 5813 2.668279 GCCTTATGACGGTTTTGTGCAG 60.668 50.000 0.00 0.00 0.00 4.41
5342 5818 4.341502 CGGTTTTGTGCAGGGCCG 62.342 66.667 0.00 0.00 0.00 6.13
5348 5824 1.109920 TTTGTGCAGGGCCGCTTAAA 61.110 50.000 18.47 15.67 0.00 1.52
5393 5869 5.472148 TGGTCATGTGCAAGAAATGATTTC 58.528 37.500 9.82 9.82 39.96 2.17
5535 6011 7.041030 TCGCCACTTAGAAATATTTTTGTGTCA 60.041 33.333 1.43 0.00 0.00 3.58
5633 6109 8.557592 TCATAGACAATAATCCATTCTGCATC 57.442 34.615 0.00 0.00 0.00 3.91
5883 6359 5.046663 TCCTGTATCTTGCTGACACAACATA 60.047 40.000 0.00 0.00 31.01 2.29
5886 6362 5.643348 TGTATCTTGCTGACACAACATAAGG 59.357 40.000 0.00 0.00 27.85 2.69
5981 6457 1.812922 CAGCTGAGGTCACCGCATC 60.813 63.158 8.42 0.00 31.99 3.91
6369 6852 7.979444 AATCTTCGATTTGGTGAAACTAAGA 57.021 32.000 0.00 0.00 38.96 2.10
6370 6853 7.602517 ATCTTCGATTTGGTGAAACTAAGAG 57.397 36.000 0.00 0.00 38.96 2.85
6371 6854 5.408604 TCTTCGATTTGGTGAAACTAAGAGC 59.591 40.000 0.00 0.00 38.96 4.09
6372 6855 4.000988 TCGATTTGGTGAAACTAAGAGCC 58.999 43.478 0.00 0.00 38.96 4.70
6373 6856 4.003648 CGATTTGGTGAAACTAAGAGCCT 58.996 43.478 0.00 0.00 38.96 4.58
6374 6857 4.142816 CGATTTGGTGAAACTAAGAGCCTG 60.143 45.833 0.00 0.00 38.96 4.85
6375 6858 3.857157 TTGGTGAAACTAAGAGCCTGT 57.143 42.857 0.00 0.00 29.95 4.00
6376 6859 3.857157 TGGTGAAACTAAGAGCCTGTT 57.143 42.857 0.00 0.00 36.74 3.16
6377 6860 3.740115 TGGTGAAACTAAGAGCCTGTTC 58.260 45.455 0.00 0.00 36.74 3.18
6378 6861 3.135712 TGGTGAAACTAAGAGCCTGTTCA 59.864 43.478 0.00 0.00 36.74 3.18
6379 6862 3.498777 GGTGAAACTAAGAGCCTGTTCAC 59.501 47.826 5.92 5.92 36.74 3.18
6380 6863 4.127171 GTGAAACTAAGAGCCTGTTCACA 58.873 43.478 8.95 0.00 0.00 3.58
6381 6864 4.574828 GTGAAACTAAGAGCCTGTTCACAA 59.425 41.667 8.95 0.00 0.00 3.33
6382 6865 5.239525 GTGAAACTAAGAGCCTGTTCACAAT 59.760 40.000 8.95 0.00 0.00 2.71
6383 6866 5.827797 TGAAACTAAGAGCCTGTTCACAATT 59.172 36.000 0.00 0.00 0.00 2.32
6384 6867 5.948992 AACTAAGAGCCTGTTCACAATTC 57.051 39.130 0.00 0.00 0.00 2.17
6385 6868 4.327680 ACTAAGAGCCTGTTCACAATTCC 58.672 43.478 0.00 0.00 0.00 3.01
6386 6869 1.813513 AGAGCCTGTTCACAATTCCG 58.186 50.000 0.00 0.00 0.00 4.30
6387 6870 0.804989 GAGCCTGTTCACAATTCCGG 59.195 55.000 0.00 0.00 0.00 5.14
6388 6871 1.212751 GCCTGTTCACAATTCCGGC 59.787 57.895 0.00 0.00 0.00 6.13
6389 6872 1.523154 GCCTGTTCACAATTCCGGCA 61.523 55.000 0.00 0.00 33.80 5.69
6390 6873 0.523072 CCTGTTCACAATTCCGGCAG 59.477 55.000 0.00 0.00 0.00 4.85
6391 6874 0.109597 CTGTTCACAATTCCGGCAGC 60.110 55.000 0.00 0.00 0.00 5.25
6392 6875 0.537143 TGTTCACAATTCCGGCAGCT 60.537 50.000 0.00 0.00 0.00 4.24
6393 6876 0.169009 GTTCACAATTCCGGCAGCTC 59.831 55.000 0.00 0.00 0.00 4.09
6394 6877 0.960364 TTCACAATTCCGGCAGCTCC 60.960 55.000 0.00 0.00 0.00 4.70
6403 6886 3.577313 GGCAGCTCCGCGAAATCC 61.577 66.667 8.23 0.00 0.00 3.01
6404 6887 3.577313 GCAGCTCCGCGAAATCCC 61.577 66.667 8.23 0.00 0.00 3.85
6405 6888 3.264897 CAGCTCCGCGAAATCCCG 61.265 66.667 8.23 0.00 0.00 5.14
6406 6889 4.530857 AGCTCCGCGAAATCCCGG 62.531 66.667 8.23 0.00 45.64 5.73
6408 6891 3.845259 CTCCGCGAAATCCCGGGA 61.845 66.667 29.18 29.18 44.45 5.14
6409 6892 3.792053 CTCCGCGAAATCCCGGGAG 62.792 68.421 30.42 16.49 44.45 4.30
6411 6894 4.530857 CGCGAAATCCCGGGAGCT 62.531 66.667 30.42 18.46 43.85 4.09
6412 6895 2.897350 GCGAAATCCCGGGAGCTG 60.897 66.667 30.42 18.81 0.00 4.24
6413 6896 2.897350 CGAAATCCCGGGAGCTGC 60.897 66.667 30.42 16.17 0.00 5.25
6414 6897 2.897350 GAAATCCCGGGAGCTGCG 60.897 66.667 30.42 0.00 0.00 5.18
6415 6898 4.489771 AAATCCCGGGAGCTGCGG 62.490 66.667 30.42 5.77 0.00 5.69
6430 6913 4.697756 CGGAGCCGGGAAACAGCA 62.698 66.667 2.18 0.00 33.87 4.41
6431 6914 2.747855 GGAGCCGGGAAACAGCAG 60.748 66.667 2.18 0.00 33.87 4.24
6432 6915 3.435186 GAGCCGGGAAACAGCAGC 61.435 66.667 2.18 0.00 33.87 5.25
6433 6916 3.909086 GAGCCGGGAAACAGCAGCT 62.909 63.158 2.18 0.00 33.87 4.24
6434 6917 2.985847 GCCGGGAAACAGCAGCTT 60.986 61.111 2.18 0.00 0.00 3.74
6435 6918 2.982744 GCCGGGAAACAGCAGCTTC 61.983 63.158 2.18 0.00 0.00 3.86
6436 6919 1.600636 CCGGGAAACAGCAGCTTCA 60.601 57.895 0.00 0.00 0.00 3.02
6437 6920 1.576421 CGGGAAACAGCAGCTTCAC 59.424 57.895 0.00 0.00 0.00 3.18
6438 6921 1.576421 GGGAAACAGCAGCTTCACG 59.424 57.895 0.00 0.00 0.00 4.35
6439 6922 0.884704 GGGAAACAGCAGCTTCACGA 60.885 55.000 0.00 0.00 0.00 4.35
6440 6923 1.160137 GGAAACAGCAGCTTCACGAT 58.840 50.000 0.00 0.00 0.00 3.73
6441 6924 1.537202 GGAAACAGCAGCTTCACGATT 59.463 47.619 0.00 0.00 0.00 3.34
6442 6925 2.030805 GGAAACAGCAGCTTCACGATTT 60.031 45.455 0.00 0.00 0.00 2.17
6443 6926 3.550842 GGAAACAGCAGCTTCACGATTTT 60.551 43.478 0.00 0.00 0.00 1.82
6444 6927 3.715628 AACAGCAGCTTCACGATTTTT 57.284 38.095 0.00 0.00 0.00 1.94
6445 6928 4.829064 AACAGCAGCTTCACGATTTTTA 57.171 36.364 0.00 0.00 0.00 1.52
6446 6929 4.829064 ACAGCAGCTTCACGATTTTTAA 57.171 36.364 0.00 0.00 0.00 1.52
6447 6930 4.537015 ACAGCAGCTTCACGATTTTTAAC 58.463 39.130 0.00 0.00 0.00 2.01
6448 6931 4.036262 ACAGCAGCTTCACGATTTTTAACA 59.964 37.500 0.00 0.00 0.00 2.41
6449 6932 4.614284 CAGCAGCTTCACGATTTTTAACAG 59.386 41.667 0.00 0.00 0.00 3.16
6450 6933 4.275936 AGCAGCTTCACGATTTTTAACAGT 59.724 37.500 0.00 0.00 0.00 3.55
6451 6934 5.468746 AGCAGCTTCACGATTTTTAACAGTA 59.531 36.000 0.00 0.00 0.00 2.74
6452 6935 6.017440 AGCAGCTTCACGATTTTTAACAGTAA 60.017 34.615 0.00 0.00 0.00 2.24
6453 6936 6.086371 GCAGCTTCACGATTTTTAACAGTAAC 59.914 38.462 0.00 0.00 0.00 2.50
6454 6937 6.577427 CAGCTTCACGATTTTTAACAGTAACC 59.423 38.462 0.00 0.00 0.00 2.85
6455 6938 5.854866 GCTTCACGATTTTTAACAGTAACCC 59.145 40.000 0.00 0.00 0.00 4.11
6456 6939 5.945466 TCACGATTTTTAACAGTAACCCC 57.055 39.130 0.00 0.00 0.00 4.95
6457 6940 5.374921 TCACGATTTTTAACAGTAACCCCA 58.625 37.500 0.00 0.00 0.00 4.96
6458 6941 5.239087 TCACGATTTTTAACAGTAACCCCAC 59.761 40.000 0.00 0.00 0.00 4.61
6459 6942 4.520111 ACGATTTTTAACAGTAACCCCACC 59.480 41.667 0.00 0.00 0.00 4.61
6460 6943 4.082625 CGATTTTTAACAGTAACCCCACCC 60.083 45.833 0.00 0.00 0.00 4.61
6461 6944 2.565046 TTTAACAGTAACCCCACCCG 57.435 50.000 0.00 0.00 0.00 5.28
6462 6945 0.036590 TTAACAGTAACCCCACCCGC 59.963 55.000 0.00 0.00 0.00 6.13
6463 6946 0.837260 TAACAGTAACCCCACCCGCT 60.837 55.000 0.00 0.00 0.00 5.52
6464 6947 2.120737 AACAGTAACCCCACCCGCTC 62.121 60.000 0.00 0.00 0.00 5.03
6465 6948 2.122056 AGTAACCCCACCCGCTCT 59.878 61.111 0.00 0.00 0.00 4.09
6466 6949 2.267961 GTAACCCCACCCGCTCTG 59.732 66.667 0.00 0.00 0.00 3.35
6467 6950 3.006728 TAACCCCACCCGCTCTGG 61.007 66.667 0.00 0.00 37.55 3.86
6477 6960 3.382111 CGCTCTGGGAGTGGAGTT 58.618 61.111 0.68 0.00 36.63 3.01
6478 6961 2.579878 CGCTCTGGGAGTGGAGTTA 58.420 57.895 0.68 0.00 36.63 2.24
6479 6962 1.115467 CGCTCTGGGAGTGGAGTTAT 58.885 55.000 0.68 0.00 36.63 1.89
6480 6963 1.202463 CGCTCTGGGAGTGGAGTTATG 60.202 57.143 0.68 0.00 36.63 1.90
6481 6964 1.139853 GCTCTGGGAGTGGAGTTATGG 59.860 57.143 0.00 0.00 31.39 2.74
6482 6965 2.752030 CTCTGGGAGTGGAGTTATGGA 58.248 52.381 0.00 0.00 0.00 3.41
6483 6966 2.697751 CTCTGGGAGTGGAGTTATGGAG 59.302 54.545 0.00 0.00 0.00 3.86
6484 6967 1.139853 CTGGGAGTGGAGTTATGGAGC 59.860 57.143 0.00 0.00 0.00 4.70
6485 6968 0.105039 GGGAGTGGAGTTATGGAGCG 59.895 60.000 0.00 0.00 0.00 5.03
6486 6969 0.105039 GGAGTGGAGTTATGGAGCGG 59.895 60.000 0.00 0.00 0.00 5.52
6487 6970 1.112113 GAGTGGAGTTATGGAGCGGA 58.888 55.000 0.00 0.00 0.00 5.54
6488 6971 1.067821 GAGTGGAGTTATGGAGCGGAG 59.932 57.143 0.00 0.00 0.00 4.63
6489 6972 0.105039 GTGGAGTTATGGAGCGGAGG 59.895 60.000 0.00 0.00 0.00 4.30
6490 6973 0.325296 TGGAGTTATGGAGCGGAGGT 60.325 55.000 0.00 0.00 46.54 3.85
6505 6988 2.186532 GAGGTCCTCCAAACAGGTTC 57.813 55.000 7.78 0.00 39.02 3.62
6506 6989 1.700186 GAGGTCCTCCAAACAGGTTCT 59.300 52.381 7.78 0.00 39.02 3.01
6556 7039 2.234300 AACAAACATCACGAGTCGGT 57.766 45.000 18.30 1.54 0.00 4.69
6572 7055 3.453559 GGTACGTCCTGAACCCATG 57.546 57.895 0.00 0.00 0.00 3.66
6580 7063 1.858910 TCCTGAACCCATGGGCATATT 59.141 47.619 31.73 17.62 39.32 1.28
6582 7065 3.040477 CCTGAACCCATGGGCATATTTT 58.960 45.455 31.73 16.41 39.32 1.82
6609 7092 4.187694 TGTTGAAAAATGCACCCACTTTC 58.812 39.130 0.00 0.00 31.51 2.62
6624 7107 6.038492 CACCCACTTTCTGAAAAATGCATTTT 59.962 34.615 27.73 27.73 43.85 1.82
6630 7113 9.986833 ACTTTCTGAAAAATGCATTTTAAACAC 57.013 25.926 31.87 21.17 41.27 3.32
6631 7114 9.985318 CTTTCTGAAAAATGCATTTTAAACACA 57.015 25.926 31.87 23.58 41.27 3.72
6702 7185 1.581727 AATGTGTGTGCGCGGCATAA 61.582 50.000 8.83 0.00 41.91 1.90
6720 7205 7.625553 CGGCATAAAGTTTTGTGAAAAATGAA 58.374 30.769 5.66 0.00 31.84 2.57
6743 7228 6.917217 ATTTTCATTTTGTCTCCGCAAAAA 57.083 29.167 7.84 0.00 46.91 1.94
6771 7256 8.293114 ACAAATTTTGGTGCTTCTAAATAACG 57.707 30.769 13.42 0.00 34.12 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.860898 CCATTATTAGACTCGATGATGTCATTA 57.139 33.333 5.46 0.00 36.57 1.90
2 3 7.821359 CCCATTATTAGACTCGATGATGTCATT 59.179 37.037 5.46 0.00 36.57 2.57
3 4 7.326454 CCCATTATTAGACTCGATGATGTCAT 58.674 38.462 5.46 0.00 39.70 3.06
4 5 6.295292 CCCCATTATTAGACTCGATGATGTCA 60.295 42.308 5.46 0.00 35.81 3.58
5 6 6.102663 CCCCATTATTAGACTCGATGATGTC 58.897 44.000 0.00 0.00 0.00 3.06
6 7 5.046304 CCCCCATTATTAGACTCGATGATGT 60.046 44.000 0.00 0.00 0.00 3.06
7 8 5.046304 ACCCCCATTATTAGACTCGATGATG 60.046 44.000 0.00 0.00 0.00 3.07
8 9 5.094387 ACCCCCATTATTAGACTCGATGAT 58.906 41.667 0.00 0.00 0.00 2.45
9 10 4.489737 ACCCCCATTATTAGACTCGATGA 58.510 43.478 0.00 0.00 0.00 2.92
10 11 4.891992 ACCCCCATTATTAGACTCGATG 57.108 45.455 0.00 0.00 0.00 3.84
11 12 6.014499 CAGTTACCCCCATTATTAGACTCGAT 60.014 42.308 0.00 0.00 0.00 3.59
12 13 5.303589 CAGTTACCCCCATTATTAGACTCGA 59.696 44.000 0.00 0.00 0.00 4.04
13 14 5.303589 TCAGTTACCCCCATTATTAGACTCG 59.696 44.000 0.00 0.00 0.00 4.18
14 15 6.742559 TCAGTTACCCCCATTATTAGACTC 57.257 41.667 0.00 0.00 0.00 3.36
15 16 6.126565 GGTTCAGTTACCCCCATTATTAGACT 60.127 42.308 0.00 0.00 31.71 3.24
16 17 6.060136 GGTTCAGTTACCCCCATTATTAGAC 58.940 44.000 0.00 0.00 31.71 2.59
17 18 5.732170 TGGTTCAGTTACCCCCATTATTAGA 59.268 40.000 0.00 0.00 37.39 2.10
18 19 5.826208 GTGGTTCAGTTACCCCCATTATTAG 59.174 44.000 0.00 0.00 37.39 1.73
19 20 5.253330 TGTGGTTCAGTTACCCCCATTATTA 59.747 40.000 0.00 0.00 37.39 0.98
20 21 4.044825 TGTGGTTCAGTTACCCCCATTATT 59.955 41.667 0.00 0.00 37.39 1.40
21 22 3.594232 TGTGGTTCAGTTACCCCCATTAT 59.406 43.478 0.00 0.00 37.39 1.28
22 23 2.987437 TGTGGTTCAGTTACCCCCATTA 59.013 45.455 0.00 0.00 37.39 1.90
23 24 1.783979 TGTGGTTCAGTTACCCCCATT 59.216 47.619 0.00 0.00 37.39 3.16
24 25 1.451449 TGTGGTTCAGTTACCCCCAT 58.549 50.000 0.00 0.00 37.39 4.00
25 26 1.451449 ATGTGGTTCAGTTACCCCCA 58.549 50.000 0.00 0.00 37.39 4.96
26 27 2.306512 TGTATGTGGTTCAGTTACCCCC 59.693 50.000 0.00 0.00 37.39 5.40
27 28 3.244630 TGTGTATGTGGTTCAGTTACCCC 60.245 47.826 0.00 0.00 37.39 4.95
28 29 4.010667 TGTGTATGTGGTTCAGTTACCC 57.989 45.455 0.00 0.00 37.39 3.69
29 30 6.380095 TTTTGTGTATGTGGTTCAGTTACC 57.620 37.500 0.00 0.00 38.73 2.85
30 31 7.251994 TGTTTTTGTGTATGTGGTTCAGTTAC 58.748 34.615 0.00 0.00 0.00 2.50
31 32 7.392494 TGTTTTTGTGTATGTGGTTCAGTTA 57.608 32.000 0.00 0.00 0.00 2.24
32 33 6.274157 TGTTTTTGTGTATGTGGTTCAGTT 57.726 33.333 0.00 0.00 0.00 3.16
33 34 5.906113 TGTTTTTGTGTATGTGGTTCAGT 57.094 34.783 0.00 0.00 0.00 3.41
34 35 5.518487 GGTTGTTTTTGTGTATGTGGTTCAG 59.482 40.000 0.00 0.00 0.00 3.02
35 36 5.047306 TGGTTGTTTTTGTGTATGTGGTTCA 60.047 36.000 0.00 0.00 0.00 3.18
36 37 5.411781 TGGTTGTTTTTGTGTATGTGGTTC 58.588 37.500 0.00 0.00 0.00 3.62
37 38 5.407407 TGGTTGTTTTTGTGTATGTGGTT 57.593 34.783 0.00 0.00 0.00 3.67
38 39 5.606348 ATGGTTGTTTTTGTGTATGTGGT 57.394 34.783 0.00 0.00 0.00 4.16
39 40 7.492669 TGTTTATGGTTGTTTTTGTGTATGTGG 59.507 33.333 0.00 0.00 0.00 4.17
40 41 8.412608 TGTTTATGGTTGTTTTTGTGTATGTG 57.587 30.769 0.00 0.00 0.00 3.21
41 42 9.436957 TTTGTTTATGGTTGTTTTTGTGTATGT 57.563 25.926 0.00 0.00 0.00 2.29
44 45 9.436957 ACATTTGTTTATGGTTGTTTTTGTGTA 57.563 25.926 0.00 0.00 0.00 2.90
45 46 8.233190 CACATTTGTTTATGGTTGTTTTTGTGT 58.767 29.630 0.00 0.00 0.00 3.72
46 47 8.446273 TCACATTTGTTTATGGTTGTTTTTGTG 58.554 29.630 0.00 0.00 0.00 3.33
47 48 8.553459 TCACATTTGTTTATGGTTGTTTTTGT 57.447 26.923 0.00 0.00 0.00 2.83
48 49 8.877779 TCTCACATTTGTTTATGGTTGTTTTTG 58.122 29.630 0.00 0.00 0.00 2.44
49 50 8.878769 GTCTCACATTTGTTTATGGTTGTTTTT 58.121 29.630 0.00 0.00 0.00 1.94
50 51 8.257306 AGTCTCACATTTGTTTATGGTTGTTTT 58.743 29.630 0.00 0.00 0.00 2.43
51 52 7.781056 AGTCTCACATTTGTTTATGGTTGTTT 58.219 30.769 0.00 0.00 0.00 2.83
52 53 7.346751 AGTCTCACATTTGTTTATGGTTGTT 57.653 32.000 0.00 0.00 0.00 2.83
53 54 6.959639 AGTCTCACATTTGTTTATGGTTGT 57.040 33.333 0.00 0.00 0.00 3.32
54 55 7.870826 TGTAGTCTCACATTTGTTTATGGTTG 58.129 34.615 0.00 0.00 0.00 3.77
55 56 8.349983 GTTGTAGTCTCACATTTGTTTATGGTT 58.650 33.333 0.00 0.00 0.00 3.67
56 57 7.040686 GGTTGTAGTCTCACATTTGTTTATGGT 60.041 37.037 0.00 0.00 0.00 3.55
57 58 7.040755 TGGTTGTAGTCTCACATTTGTTTATGG 60.041 37.037 0.00 0.00 0.00 2.74
58 59 7.803189 GTGGTTGTAGTCTCACATTTGTTTATG 59.197 37.037 0.00 0.00 0.00 1.90
59 60 7.307751 CGTGGTTGTAGTCTCACATTTGTTTAT 60.308 37.037 0.00 0.00 0.00 1.40
60 61 6.018588 CGTGGTTGTAGTCTCACATTTGTTTA 60.019 38.462 0.00 0.00 0.00 2.01
61 62 5.220777 CGTGGTTGTAGTCTCACATTTGTTT 60.221 40.000 0.00 0.00 0.00 2.83
62 63 4.272504 CGTGGTTGTAGTCTCACATTTGTT 59.727 41.667 0.00 0.00 0.00 2.83
63 64 3.807622 CGTGGTTGTAGTCTCACATTTGT 59.192 43.478 0.00 0.00 0.00 2.83
64 65 4.055360 TCGTGGTTGTAGTCTCACATTTG 58.945 43.478 0.00 0.00 0.00 2.32
65 66 4.330944 TCGTGGTTGTAGTCTCACATTT 57.669 40.909 0.00 0.00 0.00 2.32
66 67 4.056050 GTTCGTGGTTGTAGTCTCACATT 58.944 43.478 0.00 0.00 0.00 2.71
67 68 3.650139 GTTCGTGGTTGTAGTCTCACAT 58.350 45.455 0.00 0.00 0.00 3.21
68 69 2.542205 CGTTCGTGGTTGTAGTCTCACA 60.542 50.000 0.00 0.00 0.00 3.58
69 70 2.049228 CGTTCGTGGTTGTAGTCTCAC 58.951 52.381 0.00 0.00 0.00 3.51
70 71 1.601162 GCGTTCGTGGTTGTAGTCTCA 60.601 52.381 0.00 0.00 0.00 3.27
71 72 1.058404 GCGTTCGTGGTTGTAGTCTC 58.942 55.000 0.00 0.00 0.00 3.36
72 73 0.662374 CGCGTTCGTGGTTGTAGTCT 60.662 55.000 0.00 0.00 0.00 3.24
73 74 1.771044 CGCGTTCGTGGTTGTAGTC 59.229 57.895 0.00 0.00 0.00 2.59
74 75 3.926497 CGCGTTCGTGGTTGTAGT 58.074 55.556 0.00 0.00 0.00 2.73
84 85 1.626654 ATTCTTGAGGCACGCGTTCG 61.627 55.000 10.22 0.00 42.43 3.95
85 86 0.517316 AATTCTTGAGGCACGCGTTC 59.483 50.000 10.22 3.91 0.00 3.95
86 87 0.517316 GAATTCTTGAGGCACGCGTT 59.483 50.000 10.22 0.00 0.00 4.84
87 88 1.298859 GGAATTCTTGAGGCACGCGT 61.299 55.000 5.58 5.58 0.00 6.01
88 89 1.425428 GGAATTCTTGAGGCACGCG 59.575 57.895 3.53 3.53 0.00 6.01
89 90 1.298859 ACGGAATTCTTGAGGCACGC 61.299 55.000 5.23 0.00 0.00 5.34
90 91 0.721718 GACGGAATTCTTGAGGCACG 59.278 55.000 5.23 0.23 0.00 5.34
91 92 1.808411 TGACGGAATTCTTGAGGCAC 58.192 50.000 5.23 0.00 0.00 5.01
92 93 2.559698 TTGACGGAATTCTTGAGGCA 57.440 45.000 5.23 0.56 0.00 4.75
93 94 3.253432 AGTTTTGACGGAATTCTTGAGGC 59.747 43.478 5.23 0.00 0.00 4.70
94 95 4.787598 CAGTTTTGACGGAATTCTTGAGG 58.212 43.478 5.23 0.00 0.00 3.86
95 96 4.222114 GCAGTTTTGACGGAATTCTTGAG 58.778 43.478 5.23 0.00 0.00 3.02
96 97 3.629855 TGCAGTTTTGACGGAATTCTTGA 59.370 39.130 5.23 0.00 0.00 3.02
97 98 3.963665 TGCAGTTTTGACGGAATTCTTG 58.036 40.909 5.23 1.07 0.00 3.02
98 99 4.321230 GGATGCAGTTTTGACGGAATTCTT 60.321 41.667 5.23 0.00 0.00 2.52
99 100 3.191371 GGATGCAGTTTTGACGGAATTCT 59.809 43.478 5.23 0.00 0.00 2.40
100 101 3.191371 AGGATGCAGTTTTGACGGAATTC 59.809 43.478 0.00 0.00 0.00 2.17
101 102 3.157087 AGGATGCAGTTTTGACGGAATT 58.843 40.909 0.00 0.00 0.00 2.17
102 103 2.795329 AGGATGCAGTTTTGACGGAAT 58.205 42.857 0.00 0.00 0.00 3.01
103 104 2.270352 AGGATGCAGTTTTGACGGAA 57.730 45.000 0.00 0.00 0.00 4.30
104 105 3.071479 GTTAGGATGCAGTTTTGACGGA 58.929 45.455 0.00 0.00 0.00 4.69
105 106 3.074412 AGTTAGGATGCAGTTTTGACGG 58.926 45.455 0.00 0.00 0.00 4.79
106 107 4.749245 AAGTTAGGATGCAGTTTTGACG 57.251 40.909 0.00 0.00 0.00 4.35
107 108 7.377766 TGATAAGTTAGGATGCAGTTTTGAC 57.622 36.000 0.00 0.00 0.00 3.18
108 109 7.011389 CGATGATAAGTTAGGATGCAGTTTTGA 59.989 37.037 0.00 0.00 0.00 2.69
109 110 7.128331 CGATGATAAGTTAGGATGCAGTTTTG 58.872 38.462 0.00 0.00 0.00 2.44
110 111 6.823689 ACGATGATAAGTTAGGATGCAGTTTT 59.176 34.615 0.00 0.00 0.00 2.43
111 112 6.349300 ACGATGATAAGTTAGGATGCAGTTT 58.651 36.000 0.00 0.00 0.00 2.66
112 113 5.918608 ACGATGATAAGTTAGGATGCAGTT 58.081 37.500 0.00 0.00 0.00 3.16
113 114 5.537300 ACGATGATAAGTTAGGATGCAGT 57.463 39.130 0.00 0.00 0.00 4.40
114 115 5.178252 CCAACGATGATAAGTTAGGATGCAG 59.822 44.000 0.00 0.00 0.00 4.41
115 116 5.056480 CCAACGATGATAAGTTAGGATGCA 58.944 41.667 0.00 0.00 0.00 3.96
116 117 5.057149 ACCAACGATGATAAGTTAGGATGC 58.943 41.667 0.00 0.00 0.00 3.91
117 118 6.201044 GTGACCAACGATGATAAGTTAGGATG 59.799 42.308 0.00 0.00 0.00 3.51
118 119 6.281405 GTGACCAACGATGATAAGTTAGGAT 58.719 40.000 0.00 0.00 0.00 3.24
119 120 5.394883 GGTGACCAACGATGATAAGTTAGGA 60.395 44.000 0.00 0.00 0.00 2.94
120 121 4.809426 GGTGACCAACGATGATAAGTTAGG 59.191 45.833 0.00 0.00 0.00 2.69
121 122 5.416083 TGGTGACCAACGATGATAAGTTAG 58.584 41.667 0.00 0.00 0.00 2.34
122 123 5.408880 TGGTGACCAACGATGATAAGTTA 57.591 39.130 0.00 0.00 0.00 2.24
123 124 4.280436 TGGTGACCAACGATGATAAGTT 57.720 40.909 0.00 0.00 0.00 2.66
124 125 3.973206 TGGTGACCAACGATGATAAGT 57.027 42.857 0.00 0.00 0.00 2.24
125 126 5.601662 ACTATGGTGACCAACGATGATAAG 58.398 41.667 9.06 0.00 36.95 1.73
126 127 5.607939 ACTATGGTGACCAACGATGATAA 57.392 39.130 9.06 0.00 36.95 1.75
127 128 5.362717 AGAACTATGGTGACCAACGATGATA 59.637 40.000 9.06 0.00 36.95 2.15
128 129 4.162320 AGAACTATGGTGACCAACGATGAT 59.838 41.667 9.06 0.00 36.95 2.45
129 130 3.513912 AGAACTATGGTGACCAACGATGA 59.486 43.478 9.06 0.00 36.95 2.92
130 131 3.618594 CAGAACTATGGTGACCAACGATG 59.381 47.826 9.06 0.00 36.95 3.84
131 132 3.861840 CAGAACTATGGTGACCAACGAT 58.138 45.455 9.06 0.00 36.95 3.73
132 133 2.611971 GCAGAACTATGGTGACCAACGA 60.612 50.000 9.06 0.00 36.95 3.85
133 134 1.732259 GCAGAACTATGGTGACCAACG 59.268 52.381 9.06 5.08 36.95 4.10
134 135 3.059352 AGCAGAACTATGGTGACCAAC 57.941 47.619 9.06 0.00 36.95 3.77
142 143 4.343526 AGTCTATCACCAGCAGAACTATGG 59.656 45.833 0.00 0.00 40.10 2.74
143 144 5.528043 AGTCTATCACCAGCAGAACTATG 57.472 43.478 0.00 0.00 0.00 2.23
144 145 6.552445 AAAGTCTATCACCAGCAGAACTAT 57.448 37.500 0.00 0.00 0.00 2.12
145 146 6.360370 AAAAGTCTATCACCAGCAGAACTA 57.640 37.500 0.00 0.00 0.00 2.24
146 147 4.899352 AAAGTCTATCACCAGCAGAACT 57.101 40.909 0.00 0.00 0.00 3.01
147 148 5.948992 AAAAAGTCTATCACCAGCAGAAC 57.051 39.130 0.00 0.00 0.00 3.01
169 170 8.825745 GGTAAAAGCAATCTCAATTTGACAAAA 58.174 29.630 4.41 0.00 0.00 2.44
170 171 7.984050 TGGTAAAAGCAATCTCAATTTGACAAA 59.016 29.630 2.48 2.48 0.00 2.83
171 172 7.437862 GTGGTAAAAGCAATCTCAATTTGACAA 59.562 33.333 0.00 0.00 0.00 3.18
172 173 6.922957 GTGGTAAAAGCAATCTCAATTTGACA 59.077 34.615 0.00 0.00 0.00 3.58
173 174 6.088085 CGTGGTAAAAGCAATCTCAATTTGAC 59.912 38.462 0.00 0.00 0.00 3.18
174 175 6.148948 CGTGGTAAAAGCAATCTCAATTTGA 58.851 36.000 0.00 0.00 0.00 2.69
175 176 5.164061 GCGTGGTAAAAGCAATCTCAATTTG 60.164 40.000 0.00 0.00 32.90 2.32
176 177 4.923281 GCGTGGTAAAAGCAATCTCAATTT 59.077 37.500 0.00 0.00 32.90 1.82
177 178 4.218417 AGCGTGGTAAAAGCAATCTCAATT 59.782 37.500 0.00 0.00 35.46 2.32
178 179 3.758554 AGCGTGGTAAAAGCAATCTCAAT 59.241 39.130 0.00 0.00 35.46 2.57
179 180 3.146066 AGCGTGGTAAAAGCAATCTCAA 58.854 40.909 0.00 0.00 35.46 3.02
180 181 2.778299 AGCGTGGTAAAAGCAATCTCA 58.222 42.857 0.00 0.00 35.46 3.27
181 182 3.831715 AAGCGTGGTAAAAGCAATCTC 57.168 42.857 0.00 0.00 35.46 2.75
182 183 3.439129 GGTAAGCGTGGTAAAAGCAATCT 59.561 43.478 0.00 0.00 35.46 2.40
183 184 3.726782 CGGTAAGCGTGGTAAAAGCAATC 60.727 47.826 0.00 0.00 35.46 2.67
184 185 2.160813 CGGTAAGCGTGGTAAAAGCAAT 59.839 45.455 0.00 0.00 35.46 3.56
185 186 1.532007 CGGTAAGCGTGGTAAAAGCAA 59.468 47.619 0.00 0.00 35.46 3.91
186 187 1.149987 CGGTAAGCGTGGTAAAAGCA 58.850 50.000 0.00 0.00 35.46 3.91
187 188 0.179207 GCGGTAAGCGTGGTAAAAGC 60.179 55.000 0.00 0.00 35.41 3.51
188 189 3.961570 GCGGTAAGCGTGGTAAAAG 57.038 52.632 0.00 0.00 35.41 2.27
206 207 0.248661 CTATCACCAGCGAGACCACG 60.249 60.000 0.00 0.00 0.00 4.94
207 208 1.103803 TCTATCACCAGCGAGACCAC 58.896 55.000 0.00 0.00 0.00 4.16
208 209 2.073252 ATCTATCACCAGCGAGACCA 57.927 50.000 0.00 0.00 0.00 4.02
209 210 3.318275 TGTTATCTATCACCAGCGAGACC 59.682 47.826 0.00 0.00 0.00 3.85
210 211 4.569761 TGTTATCTATCACCAGCGAGAC 57.430 45.455 0.00 0.00 0.00 3.36
243 244 7.053498 AGGTTTTTGCAAGTATTTCAATGGTT 58.947 30.769 0.00 0.00 0.00 3.67
245 246 8.776376 ATAGGTTTTTGCAAGTATTTCAATGG 57.224 30.769 0.00 0.00 0.00 3.16
265 266 7.287927 TCAACGAAGATTTGATCCTCTATAGGT 59.712 37.037 0.00 0.00 44.09 3.08
268 269 8.239038 ACTCAACGAAGATTTGATCCTCTATA 57.761 34.615 0.00 0.00 32.57 1.31
274 275 5.352569 ACATGACTCAACGAAGATTTGATCC 59.647 40.000 0.00 0.00 32.57 3.36
306 307 7.792374 AGTATAATGTGCGATTGTCAATCTT 57.208 32.000 20.59 11.61 35.73 2.40
356 357 1.000607 GGTGCTACTTGTCGACTGTCA 60.001 52.381 17.92 8.07 0.00 3.58
358 359 1.000163 CTGGTGCTACTTGTCGACTGT 60.000 52.381 17.92 16.97 0.00 3.55
385 386 2.227388 CCTTTGTGAGCAAGGTCATCAC 59.773 50.000 5.17 0.00 42.90 3.06
398 399 3.885297 CTCCTTCTTTCAAGCCTTTGTGA 59.115 43.478 0.00 0.00 35.73 3.58
400 401 3.903467 ACTCCTTCTTTCAAGCCTTTGT 58.097 40.909 0.00 0.00 35.73 2.83
421 422 5.769367 CGATATCCTCGTCACCTTCATTAA 58.231 41.667 0.00 0.00 42.56 1.40
424 425 3.924918 CGATATCCTCGTCACCTTCAT 57.075 47.619 0.00 0.00 42.56 2.57
443 444 1.674817 GGTCCATGGGTATTATCCGCG 60.675 57.143 13.02 0.00 0.00 6.46
467 468 1.086696 CCGCCATGTTCTTTGTCGAT 58.913 50.000 0.00 0.00 0.00 3.59
519 520 3.202097 TCAACTTTCACGCACTTGATCA 58.798 40.909 0.00 0.00 0.00 2.92
522 523 2.627945 ACTCAACTTTCACGCACTTGA 58.372 42.857 0.00 0.00 0.00 3.02
530 531 5.354234 TCAAAGTCCTCAACTCAACTTTCAC 59.646 40.000 0.00 0.00 39.31 3.18
531 532 5.496556 TCAAAGTCCTCAACTCAACTTTCA 58.503 37.500 0.00 0.00 39.31 2.69
532 533 6.436843 TTCAAAGTCCTCAACTCAACTTTC 57.563 37.500 0.00 0.00 39.31 2.62
533 534 5.163612 GCTTCAAAGTCCTCAACTCAACTTT 60.164 40.000 0.00 0.00 41.36 2.66
534 535 4.336713 GCTTCAAAGTCCTCAACTCAACTT 59.663 41.667 0.00 0.00 37.17 2.66
536 537 3.627577 TGCTTCAAAGTCCTCAACTCAAC 59.372 43.478 0.00 0.00 37.17 3.18
537 538 3.884895 TGCTTCAAAGTCCTCAACTCAA 58.115 40.909 0.00 0.00 37.17 3.02
539 540 3.627577 TGTTGCTTCAAAGTCCTCAACTC 59.372 43.478 10.33 0.00 37.17 3.01
540 541 3.378427 GTGTTGCTTCAAAGTCCTCAACT 59.622 43.478 10.33 0.00 41.10 3.16
541 542 3.489229 GGTGTTGCTTCAAAGTCCTCAAC 60.489 47.826 0.00 0.00 35.64 3.18
542 543 2.687935 GGTGTTGCTTCAAAGTCCTCAA 59.312 45.455 0.00 0.00 0.00 3.02
552 563 1.228094 TGATGGCGGTGTTGCTTCA 60.228 52.632 0.00 0.00 34.52 3.02
565 576 1.224075 CATTGCTCTAGCGGTGATGG 58.776 55.000 0.00 0.00 45.83 3.51
574 585 2.654749 TCGTGGTGACATTGCTCTAG 57.345 50.000 0.00 0.00 46.14 2.43
586 597 2.892334 CGGCTTTGGTGTCGTGGTG 61.892 63.158 0.00 0.00 0.00 4.17
587 598 2.590575 CGGCTTTGGTGTCGTGGT 60.591 61.111 0.00 0.00 0.00 4.16
591 602 0.378962 TTTGTTCGGCTTTGGTGTCG 59.621 50.000 0.00 0.00 0.00 4.35
611 622 9.057089 CCTCTTTTGTTGTGTAGTAAGATCTTT 57.943 33.333 14.36 0.00 0.00 2.52
612 623 7.661847 CCCTCTTTTGTTGTGTAGTAAGATCTT 59.338 37.037 13.56 13.56 0.00 2.40
613 624 7.016268 TCCCTCTTTTGTTGTGTAGTAAGATCT 59.984 37.037 0.00 0.00 0.00 2.75
614 625 7.117956 GTCCCTCTTTTGTTGTGTAGTAAGATC 59.882 40.741 0.00 0.00 0.00 2.75
637 648 1.597663 CGAACGCTGGGATTATTGTCC 59.402 52.381 0.00 0.00 37.56 4.02
654 665 0.976073 AATCTCCCCTTCGGCTCGAA 60.976 55.000 9.22 9.22 43.75 3.71
712 735 8.947055 ACGTTTTAGTTTTAGTTTACAGAGGA 57.053 30.769 0.00 0.00 0.00 3.71
867 1113 9.998752 TTTCCATTAAAAATACTTCCTCCCATA 57.001 29.630 0.00 0.00 0.00 2.74
869 1115 8.728596 TTTTCCATTAAAAATACTTCCTCCCA 57.271 30.769 0.00 0.00 34.11 4.37
913 1160 2.040412 GGAGTTGGGGACTGAGTTCATT 59.960 50.000 0.00 0.00 39.19 2.57
982 1235 3.433314 CCCATTATGCTGCTCTCACTCTT 60.433 47.826 0.00 0.00 0.00 2.85
1165 1418 1.901648 TAGGTACCTTGGGGATTGGG 58.098 55.000 22.11 0.00 36.25 4.12
1334 1587 6.414408 AGAGTGAATTTCTCAAGCATTACG 57.586 37.500 12.05 0.00 35.22 3.18
1410 1663 6.795098 TGCGTATGAACTGAAACAAACTAT 57.205 33.333 0.00 0.00 0.00 2.12
1444 1697 4.662145 CAAACTGTCAAGACCAAACTGAC 58.338 43.478 0.00 0.00 0.00 3.51
1467 1720 6.717084 AGAGAAAAACAAATCTAGAACCAGGG 59.283 38.462 0.00 0.00 0.00 4.45
1491 1744 3.122613 CGTAAGCTGCAACTCAGAGAAAG 59.877 47.826 3.79 0.00 45.72 2.62
1524 1777 1.202463 AGGATAGATGCGCGATATGGC 60.202 52.381 12.10 0.00 0.00 4.40
1529 1782 1.615883 AGTTCAGGATAGATGCGCGAT 59.384 47.619 12.10 0.00 0.00 4.58
1531 1784 1.413382 GAGTTCAGGATAGATGCGCG 58.587 55.000 0.00 0.00 0.00 6.86
1564 1817 2.554032 CTCTTTGGCATGGAAACGTTCT 59.446 45.455 0.00 0.00 0.00 3.01
1630 1883 5.294060 TCGGTAACTAACACCAACTTTGTTC 59.706 40.000 0.00 0.00 38.21 3.18
1647 1900 0.367887 GATTGACGCCGTTCGGTAAC 59.632 55.000 12.81 5.23 43.86 2.50
1651 1904 1.413767 CTGAGATTGACGCCGTTCGG 61.414 60.000 6.90 6.90 43.86 4.30
1777 2030 4.202441 GGCATTTAGCTTCAAGATCCTCA 58.798 43.478 0.00 0.00 44.79 3.86
1813 2066 1.536709 GGCACCAAACAGAACAAGCTG 60.537 52.381 0.00 0.00 41.63 4.24
1962 2215 2.570284 CCCGGAAACCACCAAAGCC 61.570 63.158 0.73 0.00 0.00 4.35
1978 2231 1.600916 GAAGTGAGTGCCACCACCC 60.601 63.158 11.32 3.11 46.87 4.61
1981 2234 0.819259 GCTTGAAGTGAGTGCCACCA 60.819 55.000 0.00 0.00 46.87 4.17
2082 2335 9.159254 ACAAGATATACAAGGATCAGACCATTA 57.841 33.333 0.00 0.00 0.00 1.90
2110 2364 5.620206 AGGCGTCACATCCAAATATTGATA 58.380 37.500 0.00 0.00 0.00 2.15
2113 2367 4.816385 ACTAGGCGTCACATCCAAATATTG 59.184 41.667 0.00 0.00 0.00 1.90
2123 2377 3.328382 TTTTGCTACTAGGCGTCACAT 57.672 42.857 0.00 0.00 34.52 3.21
2129 2383 3.001736 GCTCAGAATTTTGCTACTAGGCG 59.998 47.826 0.00 0.00 34.52 5.52
2176 2430 3.372440 AGGATGTTTGCTAAAGGGGAG 57.628 47.619 0.00 0.00 0.00 4.30
2180 2434 6.623767 GCTTCAAGTAGGATGTTTGCTAAAGG 60.624 42.308 0.00 0.00 0.00 3.11
2230 2484 1.825090 TACAAGAGGGCAGCAACATG 58.175 50.000 0.00 0.00 0.00 3.21
2981 3237 8.906636 CATTGCTGATGTGATATTAATTAGCC 57.093 34.615 0.00 0.00 33.32 3.93
3085 3341 2.767644 TTCAGGATCCCCGTATCAGA 57.232 50.000 8.55 0.00 37.58 3.27
3139 3395 4.935205 CCGAACACAGTTCATTAATGGAGA 59.065 41.667 15.36 0.00 0.00 3.71
3178 3434 7.014230 TCTGGAAGGTAGTTTCTGAATTTTTGG 59.986 37.037 0.00 0.00 0.00 3.28
3195 3451 1.371558 GCGTTCAGGTCTGGAAGGT 59.628 57.895 0.00 0.00 33.81 3.50
3398 3654 3.652057 ACCACAGCCAATAAGCATACT 57.348 42.857 0.00 0.00 34.23 2.12
3442 3754 3.399330 TCAGAAAAACTCCAGTAAGCCG 58.601 45.455 0.00 0.00 0.00 5.52
3465 3777 3.827722 AGCTTTAAACAACAGGCCTACA 58.172 40.909 3.98 0.00 0.00 2.74
3532 3845 4.441356 GGTTGATGTTCAGTGCTCCAAAAA 60.441 41.667 0.00 0.00 0.00 1.94
3660 3973 2.056577 GGACTTCCTAACGTCGTTGTG 58.943 52.381 20.62 12.45 0.00 3.33
3727 4040 2.067932 CTTCCAGGGTTGACAGGCCA 62.068 60.000 5.01 0.00 0.00 5.36
3734 4047 3.138283 ACAAGAATGACTTCCAGGGTTGA 59.862 43.478 0.00 0.00 36.61 3.18
3853 4166 4.343814 CCACACCCAAACTGTTTTCCTATT 59.656 41.667 2.41 0.00 0.00 1.73
4418 4891 2.297033 TGAAAAGAGGTGGAAAGCATGC 59.703 45.455 10.51 10.51 0.00 4.06
4685 5158 9.523168 TGGCCCTTAAAACATATGTTATATACC 57.477 33.333 21.07 15.84 37.25 2.73
4706 5179 1.238625 TTTGACCGTCGATTTGGCCC 61.239 55.000 0.00 0.00 0.00 5.80
5026 5499 8.945195 TCTTATAATAGTGAACGGAGGGATTA 57.055 34.615 0.00 0.00 0.00 1.75
5028 5501 7.455008 ACATCTTATAATAGTGAACGGAGGGAT 59.545 37.037 0.00 0.00 0.00 3.85
5337 5813 3.211045 TCAATCAGTATTTAAGCGGCCC 58.789 45.455 0.00 0.00 0.00 5.80
5393 5869 6.390721 CACATACTATCGTATTTCCCTGGAG 58.609 44.000 0.00 0.00 34.14 3.86
5422 5898 7.280876 TGTTATACATTGAGAAACAGGCTGATC 59.719 37.037 23.66 18.05 0.00 2.92
5633 6109 4.871557 CCCTGCATGTCCAAAATTATTGTG 59.128 41.667 0.00 0.00 0.00 3.33
5854 6330 4.030216 TGTCAGCAAGATACAGGATGGTA 58.970 43.478 0.00 0.00 43.62 3.25
5883 6359 4.360951 TGTACACCCGAAAATCTTCCTT 57.639 40.909 0.00 0.00 0.00 3.36
5911 6387 5.591877 GCATACTGGAGGAACATCTTGAAAT 59.408 40.000 0.00 0.00 0.00 2.17
5993 6471 0.835941 ATCCCAGTCATGTCCTCTGC 59.164 55.000 0.00 0.00 0.00 4.26
6257 6738 2.829720 ACTTACTGGATCCGCAACAGTA 59.170 45.455 7.39 6.04 43.13 2.74
6368 6851 0.804989 CCGGAATTGTGAACAGGCTC 59.195 55.000 0.00 0.00 0.00 4.70
6369 6852 1.244019 GCCGGAATTGTGAACAGGCT 61.244 55.000 5.05 0.00 40.57 4.58
6370 6853 1.212751 GCCGGAATTGTGAACAGGC 59.787 57.895 5.05 0.00 37.66 4.85
6371 6854 0.523072 CTGCCGGAATTGTGAACAGG 59.477 55.000 5.05 0.00 0.00 4.00
6372 6855 0.109597 GCTGCCGGAATTGTGAACAG 60.110 55.000 5.05 0.00 0.00 3.16
6373 6856 0.537143 AGCTGCCGGAATTGTGAACA 60.537 50.000 5.05 0.00 0.00 3.18
6374 6857 0.169009 GAGCTGCCGGAATTGTGAAC 59.831 55.000 5.05 0.00 0.00 3.18
6375 6858 0.960364 GGAGCTGCCGGAATTGTGAA 60.960 55.000 5.05 0.00 0.00 3.18
6376 6859 1.377202 GGAGCTGCCGGAATTGTGA 60.377 57.895 5.05 0.00 0.00 3.58
6377 6860 3.190878 GGAGCTGCCGGAATTGTG 58.809 61.111 5.05 0.00 0.00 3.33
6395 6878 2.897350 CAGCTCCCGGGATTTCGC 60.897 66.667 27.07 23.98 0.00 4.70
6396 6879 2.897350 GCAGCTCCCGGGATTTCG 60.897 66.667 27.07 14.03 0.00 3.46
6397 6880 2.897350 CGCAGCTCCCGGGATTTC 60.897 66.667 27.07 16.33 0.00 2.17
6398 6881 4.489771 CCGCAGCTCCCGGGATTT 62.490 66.667 27.07 12.84 41.99 2.17
6410 6893 4.697756 TGTTTCCCGGCTCCGCAG 62.698 66.667 0.00 0.00 38.24 5.18
6411 6894 4.697756 CTGTTTCCCGGCTCCGCA 62.698 66.667 0.00 0.00 38.24 5.69
6413 6896 4.697756 TGCTGTTTCCCGGCTCCG 62.698 66.667 0.00 0.48 46.27 4.63
6414 6897 2.747855 CTGCTGTTTCCCGGCTCC 60.748 66.667 0.00 0.00 46.27 4.70
6415 6898 3.435186 GCTGCTGTTTCCCGGCTC 61.435 66.667 0.00 0.00 46.27 4.70
6416 6899 3.497884 AAGCTGCTGTTTCCCGGCT 62.498 57.895 1.35 0.00 46.27 5.52
6417 6900 2.982744 GAAGCTGCTGTTTCCCGGC 61.983 63.158 1.35 0.00 46.31 6.13
6418 6901 1.600636 TGAAGCTGCTGTTTCCCGG 60.601 57.895 15.67 0.00 33.31 5.73
6419 6902 1.576421 GTGAAGCTGCTGTTTCCCG 59.424 57.895 15.67 0.00 33.31 5.14
6420 6903 0.884704 TCGTGAAGCTGCTGTTTCCC 60.885 55.000 15.67 5.34 33.31 3.97
6421 6904 1.160137 ATCGTGAAGCTGCTGTTTCC 58.840 50.000 15.67 7.77 33.31 3.13
6422 6905 2.977405 AATCGTGAAGCTGCTGTTTC 57.023 45.000 1.35 12.30 34.58 2.78
6423 6906 3.715628 AAAATCGTGAAGCTGCTGTTT 57.284 38.095 1.35 0.00 0.00 2.83
6424 6907 3.715628 AAAAATCGTGAAGCTGCTGTT 57.284 38.095 1.35 0.00 0.00 3.16
6425 6908 4.036262 TGTTAAAAATCGTGAAGCTGCTGT 59.964 37.500 1.35 0.00 0.00 4.40
6426 6909 4.536065 TGTTAAAAATCGTGAAGCTGCTG 58.464 39.130 1.35 0.00 0.00 4.41
6427 6910 4.275936 ACTGTTAAAAATCGTGAAGCTGCT 59.724 37.500 0.00 0.00 0.00 4.24
6428 6911 4.537015 ACTGTTAAAAATCGTGAAGCTGC 58.463 39.130 0.00 0.00 0.00 5.25
6429 6912 6.577427 GGTTACTGTTAAAAATCGTGAAGCTG 59.423 38.462 0.00 0.00 0.00 4.24
6430 6913 6.293790 GGGTTACTGTTAAAAATCGTGAAGCT 60.294 38.462 0.00 0.00 0.00 3.74
6431 6914 5.854866 GGGTTACTGTTAAAAATCGTGAAGC 59.145 40.000 0.00 0.00 0.00 3.86
6432 6915 6.016943 TGGGGTTACTGTTAAAAATCGTGAAG 60.017 38.462 0.00 0.00 0.00 3.02
6433 6916 5.826737 TGGGGTTACTGTTAAAAATCGTGAA 59.173 36.000 0.00 0.00 0.00 3.18
6434 6917 5.239087 GTGGGGTTACTGTTAAAAATCGTGA 59.761 40.000 0.00 0.00 0.00 4.35
6435 6918 5.454520 GTGGGGTTACTGTTAAAAATCGTG 58.545 41.667 0.00 0.00 0.00 4.35
6436 6919 4.520111 GGTGGGGTTACTGTTAAAAATCGT 59.480 41.667 0.00 0.00 0.00 3.73
6437 6920 4.082625 GGGTGGGGTTACTGTTAAAAATCG 60.083 45.833 0.00 0.00 0.00 3.34
6438 6921 4.082625 CGGGTGGGGTTACTGTTAAAAATC 60.083 45.833 0.00 0.00 0.00 2.17
6439 6922 3.827876 CGGGTGGGGTTACTGTTAAAAAT 59.172 43.478 0.00 0.00 0.00 1.82
6440 6923 3.220940 CGGGTGGGGTTACTGTTAAAAA 58.779 45.455 0.00 0.00 0.00 1.94
6441 6924 2.861274 CGGGTGGGGTTACTGTTAAAA 58.139 47.619 0.00 0.00 0.00 1.52
6442 6925 1.545204 GCGGGTGGGGTTACTGTTAAA 60.545 52.381 0.00 0.00 0.00 1.52
6443 6926 0.036590 GCGGGTGGGGTTACTGTTAA 59.963 55.000 0.00 0.00 0.00 2.01
6444 6927 0.837260 AGCGGGTGGGGTTACTGTTA 60.837 55.000 0.00 0.00 0.00 2.41
6445 6928 2.120737 GAGCGGGTGGGGTTACTGTT 62.121 60.000 0.00 0.00 0.00 3.16
6446 6929 2.528378 AGCGGGTGGGGTTACTGT 60.528 61.111 0.00 0.00 0.00 3.55
6447 6930 2.267961 GAGCGGGTGGGGTTACTG 59.732 66.667 0.00 0.00 0.00 2.74
6448 6931 2.122056 AGAGCGGGTGGGGTTACT 59.878 61.111 0.00 0.00 0.00 2.24
6449 6932 2.267961 CAGAGCGGGTGGGGTTAC 59.732 66.667 0.00 0.00 0.00 2.50
6450 6933 3.006728 CCAGAGCGGGTGGGGTTA 61.007 66.667 0.00 0.00 0.00 2.85
6459 6942 0.970937 TAACTCCACTCCCAGAGCGG 60.971 60.000 0.00 0.00 33.57 5.52
6460 6943 1.115467 ATAACTCCACTCCCAGAGCG 58.885 55.000 0.00 0.00 33.18 5.03
6461 6944 1.139853 CCATAACTCCACTCCCAGAGC 59.860 57.143 0.00 0.00 33.18 4.09
6462 6945 2.697751 CTCCATAACTCCACTCCCAGAG 59.302 54.545 0.00 0.00 36.16 3.35
6463 6946 2.752030 CTCCATAACTCCACTCCCAGA 58.248 52.381 0.00 0.00 0.00 3.86
6464 6947 1.139853 GCTCCATAACTCCACTCCCAG 59.860 57.143 0.00 0.00 0.00 4.45
6465 6948 1.204146 GCTCCATAACTCCACTCCCA 58.796 55.000 0.00 0.00 0.00 4.37
6466 6949 0.105039 CGCTCCATAACTCCACTCCC 59.895 60.000 0.00 0.00 0.00 4.30
6467 6950 0.105039 CCGCTCCATAACTCCACTCC 59.895 60.000 0.00 0.00 0.00 3.85
6468 6951 1.067821 CTCCGCTCCATAACTCCACTC 59.932 57.143 0.00 0.00 0.00 3.51
6469 6952 1.115467 CTCCGCTCCATAACTCCACT 58.885 55.000 0.00 0.00 0.00 4.00
6470 6953 0.105039 CCTCCGCTCCATAACTCCAC 59.895 60.000 0.00 0.00 0.00 4.02
6471 6954 0.325296 ACCTCCGCTCCATAACTCCA 60.325 55.000 0.00 0.00 0.00 3.86
6472 6955 0.389757 GACCTCCGCTCCATAACTCC 59.610 60.000 0.00 0.00 0.00 3.85
6473 6956 0.389757 GGACCTCCGCTCCATAACTC 59.610 60.000 0.00 0.00 0.00 3.01
6474 6957 0.032017 AGGACCTCCGCTCCATAACT 60.032 55.000 0.00 0.00 42.08 2.24
6475 6958 0.389757 GAGGACCTCCGCTCCATAAC 59.610 60.000 10.74 0.00 42.08 1.89
6476 6959 0.759436 GGAGGACCTCCGCTCCATAA 60.759 60.000 24.98 0.00 41.08 1.90
6477 6960 1.152525 GGAGGACCTCCGCTCCATA 60.153 63.158 24.98 0.00 41.08 2.74
6478 6961 2.444895 GGAGGACCTCCGCTCCAT 60.445 66.667 24.98 0.00 41.08 3.41
6486 6969 1.700186 AGAACCTGTTTGGAGGACCTC 59.300 52.381 13.60 13.60 39.71 3.85
6487 6970 1.821088 AGAACCTGTTTGGAGGACCT 58.179 50.000 0.00 0.00 39.71 3.85
6488 6971 3.072622 AGTTAGAACCTGTTTGGAGGACC 59.927 47.826 0.00 0.00 39.71 4.46
6489 6972 4.353383 AGTTAGAACCTGTTTGGAGGAC 57.647 45.455 0.00 0.00 39.71 3.85
6490 6973 4.714632 CAAGTTAGAACCTGTTTGGAGGA 58.285 43.478 0.00 0.00 39.71 3.71
6491 6974 3.253432 GCAAGTTAGAACCTGTTTGGAGG 59.747 47.826 0.00 0.00 39.71 4.30
6492 6975 3.058914 CGCAAGTTAGAACCTGTTTGGAG 60.059 47.826 0.00 0.00 39.71 3.86
6493 6976 2.875933 CGCAAGTTAGAACCTGTTTGGA 59.124 45.455 0.00 0.00 39.71 3.53
6494 6977 2.031157 CCGCAAGTTAGAACCTGTTTGG 60.031 50.000 0.00 0.00 42.93 3.28
6495 6978 2.616842 ACCGCAAGTTAGAACCTGTTTG 59.383 45.455 0.00 0.00 0.00 2.93
6496 6979 2.927028 ACCGCAAGTTAGAACCTGTTT 58.073 42.857 0.00 0.00 0.00 2.83
6497 6980 2.616842 CAACCGCAAGTTAGAACCTGTT 59.383 45.455 0.00 0.00 36.18 3.16
6498 6981 2.218603 CAACCGCAAGTTAGAACCTGT 58.781 47.619 0.00 0.00 36.18 4.00
6499 6982 1.535462 CCAACCGCAAGTTAGAACCTG 59.465 52.381 0.00 0.00 36.18 4.00
6500 6983 1.142262 ACCAACCGCAAGTTAGAACCT 59.858 47.619 0.00 0.00 36.18 3.50
6501 6984 1.601166 ACCAACCGCAAGTTAGAACC 58.399 50.000 0.00 0.00 36.18 3.62
6502 6985 3.364664 GCTTACCAACCGCAAGTTAGAAC 60.365 47.826 0.00 0.00 36.18 3.01
6503 6986 2.809696 GCTTACCAACCGCAAGTTAGAA 59.190 45.455 0.00 0.00 36.18 2.10
6504 6987 2.038033 AGCTTACCAACCGCAAGTTAGA 59.962 45.455 0.00 0.00 36.18 2.10
6505 6988 2.423577 AGCTTACCAACCGCAAGTTAG 58.576 47.619 0.00 0.00 36.18 2.34
6506 6989 2.550606 CAAGCTTACCAACCGCAAGTTA 59.449 45.455 0.00 0.00 36.18 2.24
6556 7039 1.906105 GCCCATGGGTTCAGGACGTA 61.906 60.000 31.58 0.00 37.65 3.57
6580 7063 5.241506 TGGGTGCATTTTTCAACAACAAAAA 59.758 32.000 0.00 0.00 37.18 1.94
6582 7065 4.154918 GTGGGTGCATTTTTCAACAACAAA 59.845 37.500 0.00 0.00 0.00 2.83
6584 7067 3.055530 AGTGGGTGCATTTTTCAACAACA 60.056 39.130 0.00 0.00 27.47 3.33
6585 7068 3.530535 AGTGGGTGCATTTTTCAACAAC 58.469 40.909 0.00 0.00 0.00 3.32
6586 7069 3.902881 AGTGGGTGCATTTTTCAACAA 57.097 38.095 0.00 0.00 0.00 2.83
6587 7070 3.902881 AAGTGGGTGCATTTTTCAACA 57.097 38.095 0.00 0.00 0.00 3.33
6588 7071 4.270808 CAGAAAGTGGGTGCATTTTTCAAC 59.729 41.667 0.00 0.00 31.83 3.18
6589 7072 4.161189 TCAGAAAGTGGGTGCATTTTTCAA 59.839 37.500 0.00 0.00 31.83 2.69
6590 7073 3.703556 TCAGAAAGTGGGTGCATTTTTCA 59.296 39.130 0.00 0.00 31.83 2.69
6591 7074 4.320608 TCAGAAAGTGGGTGCATTTTTC 57.679 40.909 0.00 0.00 0.00 2.29
6592 7075 4.751767 TTCAGAAAGTGGGTGCATTTTT 57.248 36.364 0.00 0.00 0.00 1.94
6593 7076 4.751767 TTTCAGAAAGTGGGTGCATTTT 57.248 36.364 0.00 0.00 0.00 1.82
6594 7077 4.751767 TTTTCAGAAAGTGGGTGCATTT 57.248 36.364 0.00 0.00 0.00 2.32
6595 7078 4.751767 TTTTTCAGAAAGTGGGTGCATT 57.248 36.364 0.00 0.00 0.00 3.56
6596 7079 4.634199 CATTTTTCAGAAAGTGGGTGCAT 58.366 39.130 0.00 0.00 31.12 3.96
6597 7080 3.740764 GCATTTTTCAGAAAGTGGGTGCA 60.741 43.478 10.63 0.00 34.22 4.57
6598 7081 2.802247 GCATTTTTCAGAAAGTGGGTGC 59.198 45.455 10.63 7.80 34.22 5.01
6599 7082 4.057406 TGCATTTTTCAGAAAGTGGGTG 57.943 40.909 10.63 3.13 34.22 4.61
6600 7083 4.961438 ATGCATTTTTCAGAAAGTGGGT 57.039 36.364 0.00 0.00 34.22 4.51
6601 7084 6.622833 AAAATGCATTTTTCAGAAAGTGGG 57.377 33.333 27.73 0.00 36.65 4.61
6657 7140 8.367943 TGCAAACATATATGCATGGAATTTTC 57.632 30.769 10.16 0.04 46.87 2.29
6673 7156 3.048501 CGCACACACATTTGCAAACATA 58.951 40.909 15.41 0.00 38.76 2.29
6679 7162 2.353261 CGCGCACACACATTTGCA 60.353 55.556 8.75 0.00 38.76 4.08
6680 7163 3.098958 CCGCGCACACACATTTGC 61.099 61.111 8.75 0.00 35.26 3.68
6685 7168 2.181372 CTTTATGCCGCGCACACACA 62.181 55.000 8.75 0.00 43.04 3.72
6686 7169 1.511887 CTTTATGCCGCGCACACAC 60.512 57.895 8.75 0.00 43.04 3.82
6720 7205 6.917217 TTTTTGCGGAGACAAAATGAAAAT 57.083 29.167 3.53 0.00 45.98 1.82
6748 7233 8.880878 AACGTTATTTAGAAGCACCAAAATTT 57.119 26.923 0.00 0.00 0.00 1.82
6754 7239 8.231837 GTCATAAAACGTTATTTAGAAGCACCA 58.768 33.333 0.00 0.00 0.00 4.17
6755 7240 8.231837 TGTCATAAAACGTTATTTAGAAGCACC 58.768 33.333 0.00 0.00 0.00 5.01
6756 7241 9.769093 ATGTCATAAAACGTTATTTAGAAGCAC 57.231 29.630 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.