Multiple sequence alignment - TraesCS1D01G235700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G235700 chr1D 100.000 2119 0 0 2365 4483 324746662 324744544 0.000000e+00 3914.0
1 TraesCS1D01G235700 chr1D 100.000 2103 0 0 1 2103 324749026 324746924 0.000000e+00 3884.0
2 TraesCS1D01G235700 chr1B 93.223 1815 89 17 2688 4483 437552502 437550703 0.000000e+00 2639.0
3 TraesCS1D01G235700 chr1B 95.677 347 13 1 856 1200 437554076 437553730 1.410000e-154 556.0
4 TraesCS1D01G235700 chr1B 81.193 553 42 22 1325 1816 437553416 437552865 5.440000e-104 388.0
5 TraesCS1D01G235700 chr1B 89.831 118 10 1 1211 1326 437553615 437553498 2.790000e-32 150.0
6 TraesCS1D01G235700 chr1A 95.392 1172 35 7 2815 3977 419480458 419481619 0.000000e+00 1847.0
7 TraesCS1D01G235700 chr1A 94.802 481 18 3 4006 4483 419482746 419483222 0.000000e+00 743.0
8 TraesCS1D01G235700 chr1A 96.812 345 11 0 856 1200 419479018 419479362 1.080000e-160 577.0
9 TraesCS1D01G235700 chr1A 78.486 502 42 27 1325 1762 419479919 419480418 7.390000e-68 268.0
10 TraesCS1D01G235700 chr1A 91.057 123 9 1 1211 1331 419479479 419479601 9.980000e-37 165.0
11 TraesCS1D01G235700 chr7A 93.282 655 44 0 1 655 210839030 210838376 0.000000e+00 966.0
12 TraesCS1D01G235700 chr7A 88.276 290 26 7 1819 2103 400069065 400068779 1.540000e-89 340.0
13 TraesCS1D01G235700 chr5D 87.470 830 98 4 2 825 498620571 498621400 0.000000e+00 952.0
14 TraesCS1D01G235700 chr5D 89.003 291 22 5 1819 2099 393057978 393058268 7.130000e-93 351.0
15 TraesCS1D01G235700 chr5D 88.316 291 24 5 1819 2099 390694446 390694156 1.540000e-89 340.0
16 TraesCS1D01G235700 chr6A 82.718 839 126 14 1 824 13089988 13090822 0.000000e+00 728.0
17 TraesCS1D01G235700 chr6A 82.262 840 128 16 1 824 13087742 13088576 0.000000e+00 706.0
18 TraesCS1D01G235700 chr6A 80.529 832 139 17 1 824 13147919 13148735 6.370000e-173 617.0
19 TraesCS1D01G235700 chr6A 82.857 665 108 6 1 662 45377093 45376432 3.860000e-165 592.0
20 TraesCS1D01G235700 chr4A 85.180 695 85 14 136 823 589116926 589116243 0.000000e+00 697.0
21 TraesCS1D01G235700 chr5A 81.786 840 132 16 1 824 514206753 514207587 0.000000e+00 684.0
22 TraesCS1D01G235700 chr5A 82.831 664 110 4 1 662 403278938 403278277 3.860000e-165 592.0
23 TraesCS1D01G235700 chr5A 90.000 280 17 6 1819 2088 494231294 494231016 7.130000e-93 351.0
24 TraesCS1D01G235700 chr5A 93.617 47 3 0 2444 2490 297737994 297737948 2.240000e-08 71.3
25 TraesCS1D01G235700 chr2A 87.713 293 26 5 1820 2102 88010000 88010292 2.580000e-87 333.0
26 TraesCS1D01G235700 chr6B 87.197 289 28 7 1818 2099 713064433 713064719 2.010000e-83 320.0
27 TraesCS1D01G235700 chr5B 86.780 295 25 6 1819 2099 471023209 471022915 2.600000e-82 316.0
28 TraesCS1D01G235700 chr5B 86.806 288 25 6 1819 2096 473116638 473116922 4.360000e-80 309.0
29 TraesCS1D01G235700 chr5B 87.050 278 28 5 1827 2096 693677750 693677473 1.570000e-79 307.0
30 TraesCS1D01G235700 chr3A 81.579 380 50 17 2696 3065 57893965 57893596 3.390000e-76 296.0
31 TraesCS1D01G235700 chr3D 80.637 377 55 16 2696 3065 46474089 46473724 4.420000e-70 276.0
32 TraesCS1D01G235700 chr3B 82.792 308 38 13 2765 3065 72485724 72485425 1.240000e-65 261.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G235700 chr1D 324744544 324749026 4482 True 3899.00 3914 100.0000 1 4483 2 chr1D.!!$R1 4482
1 TraesCS1D01G235700 chr1B 437550703 437554076 3373 True 933.25 2639 89.9810 856 4483 4 chr1B.!!$R1 3627
2 TraesCS1D01G235700 chr1A 419479018 419483222 4204 False 720.00 1847 91.3098 856 4483 5 chr1A.!!$F1 3627
3 TraesCS1D01G235700 chr7A 210838376 210839030 654 True 966.00 966 93.2820 1 655 1 chr7A.!!$R1 654
4 TraesCS1D01G235700 chr5D 498620571 498621400 829 False 952.00 952 87.4700 2 825 1 chr5D.!!$F2 823
5 TraesCS1D01G235700 chr6A 13087742 13090822 3080 False 717.00 728 82.4900 1 824 2 chr6A.!!$F2 823
6 TraesCS1D01G235700 chr6A 13147919 13148735 816 False 617.00 617 80.5290 1 824 1 chr6A.!!$F1 823
7 TraesCS1D01G235700 chr6A 45376432 45377093 661 True 592.00 592 82.8570 1 662 1 chr6A.!!$R1 661
8 TraesCS1D01G235700 chr4A 589116243 589116926 683 True 697.00 697 85.1800 136 823 1 chr4A.!!$R1 687
9 TraesCS1D01G235700 chr5A 514206753 514207587 834 False 684.00 684 81.7860 1 824 1 chr5A.!!$F1 823
10 TraesCS1D01G235700 chr5A 403278277 403278938 661 True 592.00 592 82.8310 1 662 1 chr5A.!!$R2 661

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
664 2911 0.252197 GGTCGCCATCTAGGGTTTGT 59.748 55.0 0.0 0.0 38.09 2.83 F
1429 4146 0.178068 ATTTACGAGCCTCGCATGGT 59.822 50.0 15.2 0.0 45.12 3.55 F
2102 4893 0.198696 AAAGGAAGGGGGAGGAGGAA 59.801 55.0 0.0 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2083 4874 0.198696 TTCCTCCTCCCCCTTCCTTT 59.801 55.0 0.0 0.0 0.0 3.11 R
2853 5672 0.106519 AGGCACAAGACCAAAGCTGT 60.107 50.0 0.0 0.0 0.0 4.40 R
3938 6775 0.537188 ACCGTCACCAGATCCACATC 59.463 55.0 0.0 0.0 0.0 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 2.593436 CCCTCGCCCACAACGTTT 60.593 61.111 0.00 0.00 0.00 3.60
111 112 0.389757 GAACCCTAGCACGGATCCTC 59.610 60.000 10.75 0.00 0.00 3.71
200 2447 1.115467 AGCTGATCAACTACCTCGGG 58.885 55.000 0.00 0.00 0.00 5.14
238 2485 2.289694 GGTATATTGTGGATCTGCGCCT 60.290 50.000 4.18 0.00 0.00 5.52
263 2510 5.948162 AGACATACAAGCCATCAAAGACAAT 59.052 36.000 0.00 0.00 0.00 2.71
417 2664 0.322546 CCTCCCTGTACTTTGGCACC 60.323 60.000 0.00 0.00 0.00 5.01
555 2802 1.229336 CTCCTCCCCCACTGTCACT 60.229 63.158 0.00 0.00 0.00 3.41
663 2910 0.810031 CGGTCGCCATCTAGGGTTTG 60.810 60.000 0.00 0.00 38.09 2.93
664 2911 0.252197 GGTCGCCATCTAGGGTTTGT 59.748 55.000 0.00 0.00 38.09 2.83
690 2942 2.825836 CAGCTAGCCGGGCCAAAG 60.826 66.667 17.02 12.15 0.00 2.77
710 2964 3.273654 AGACGGTCCTCTCCCCCA 61.274 66.667 4.14 0.00 0.00 4.96
784 3044 1.614241 AAACTCTAGGCGGCGATGGT 61.614 55.000 12.98 0.00 0.00 3.55
785 3045 2.028190 CTCTAGGCGGCGATGGTG 59.972 66.667 12.98 0.00 0.00 4.17
786 3047 2.758327 TCTAGGCGGCGATGGTGT 60.758 61.111 12.98 0.00 0.00 4.16
845 3106 8.956426 GGTACCAACTTATTTTTGATGAGATCA 58.044 33.333 7.15 0.00 37.55 2.92
846 3107 9.774742 GTACCAACTTATTTTTGATGAGATCAC 57.225 33.333 0.00 0.00 39.39 3.06
847 3108 8.408043 ACCAACTTATTTTTGATGAGATCACA 57.592 30.769 0.00 0.00 39.39 3.58
848 3109 8.859090 ACCAACTTATTTTTGATGAGATCACAA 58.141 29.630 0.00 0.00 39.39 3.33
849 3110 9.695526 CCAACTTATTTTTGATGAGATCACAAA 57.304 29.630 0.00 0.00 41.50 2.83
928 3191 1.675641 CCCAAAACGAGCCCCTCTG 60.676 63.158 0.00 0.00 0.00 3.35
1200 3463 0.625849 TCCCTTTCCAGCTCCCATTC 59.374 55.000 0.00 0.00 0.00 2.67
1201 3464 0.332632 CCCTTTCCAGCTCCCATTCA 59.667 55.000 0.00 0.00 0.00 2.57
1203 3466 1.467920 CTTTCCAGCTCCCATTCACC 58.532 55.000 0.00 0.00 0.00 4.02
1204 3467 0.322456 TTTCCAGCTCCCATTCACCG 60.322 55.000 0.00 0.00 0.00 4.94
1205 3468 1.198094 TTCCAGCTCCCATTCACCGA 61.198 55.000 0.00 0.00 0.00 4.69
1207 3470 0.816825 CCAGCTCCCATTCACCGATG 60.817 60.000 0.00 0.00 0.00 3.84
1208 3471 1.153086 AGCTCCCATTCACCGATGC 60.153 57.895 0.00 0.00 0.00 3.91
1235 3604 1.267038 CGTGCCATTCGATTTCGTCTG 60.267 52.381 0.00 0.00 40.80 3.51
1241 3610 3.181520 CCATTCGATTTCGTCTGGTTCAC 60.182 47.826 12.34 0.00 40.80 3.18
1255 3624 1.676014 GGTTCACCGTGAAGGATGGAG 60.676 57.143 14.35 0.00 45.00 3.86
1332 4034 5.586243 GGTGTTTGATATCTGCTATGTGTGT 59.414 40.000 3.98 0.00 0.00 3.72
1333 4035 6.457392 GGTGTTTGATATCTGCTATGTGTGTG 60.457 42.308 3.98 0.00 0.00 3.82
1334 4036 6.092670 GTGTTTGATATCTGCTATGTGTGTGT 59.907 38.462 3.98 0.00 0.00 3.72
1357 4059 6.637254 TGTCGCTGTCTTTATTCGAATCTATC 59.363 38.462 15.25 3.90 0.00 2.08
1381 4083 3.117776 TGGTCAGGATAGCGGTAGAACTA 60.118 47.826 0.00 0.00 0.00 2.24
1405 4122 3.200165 AGAAGGGTAGATAAACACAGGGC 59.800 47.826 0.00 0.00 0.00 5.19
1414 4131 7.338449 GGTAGATAAACACAGGGCTTTGATTTA 59.662 37.037 0.00 2.84 0.00 1.40
1422 4139 1.671328 GGGCTTTGATTTACGAGCCTC 59.329 52.381 12.41 0.57 41.71 4.70
1428 4145 0.861837 GATTTACGAGCCTCGCATGG 59.138 55.000 15.20 0.00 45.12 3.66
1429 4146 0.178068 ATTTACGAGCCTCGCATGGT 59.822 50.000 15.20 0.00 45.12 3.55
1430 4147 0.818938 TTTACGAGCCTCGCATGGTA 59.181 50.000 15.20 0.00 45.12 3.25
1433 4150 1.299468 CGAGCCTCGCATGGTACTC 60.299 63.158 0.00 0.00 31.14 2.59
1434 4151 1.816537 GAGCCTCGCATGGTACTCA 59.183 57.895 0.00 0.00 0.00 3.41
1475 4192 5.012046 TCTCTGGATGCCAATAATGTACGAT 59.988 40.000 0.00 0.00 30.80 3.73
1506 4250 0.457851 GCAGTCATACCAGTCGAGCT 59.542 55.000 0.00 0.00 0.00 4.09
1531 4276 8.574251 TTGCTACCACACAATATCAGTAATTT 57.426 30.769 0.00 0.00 0.00 1.82
1551 4296 2.885616 TCTAGAGTCGAAAAGTGGGGT 58.114 47.619 0.00 0.00 0.00 4.95
1586 4331 6.710278 TGTGATCATTGACTTAACATGAGGA 58.290 36.000 0.00 0.00 0.00 3.71
1591 4336 9.770097 GATCATTGACTTAACATGAGGAGATAA 57.230 33.333 0.00 0.00 0.00 1.75
1605 4350 8.751242 CATGAGGAGATAATGTGACTCTGATAT 58.249 37.037 0.00 0.00 0.00 1.63
1606 4351 9.987726 ATGAGGAGATAATGTGACTCTGATATA 57.012 33.333 0.00 0.00 0.00 0.86
1619 4364 9.774742 GTGACTCTGATATAATTTGTTTCCAAC 57.225 33.333 0.00 0.00 0.00 3.77
1632 4377 5.437289 TGTTTCCAACACAAGCTGATTAG 57.563 39.130 0.00 0.00 36.25 1.73
1639 4384 7.168219 TCCAACACAAGCTGATTAGACTTTAT 58.832 34.615 0.00 0.00 0.00 1.40
1686 4452 1.755179 AGTGATGCCAAGATTTCCCG 58.245 50.000 0.00 0.00 0.00 5.14
1690 4456 2.091541 GATGCCAAGATTTCCCGTTCA 58.908 47.619 0.00 0.00 0.00 3.18
1692 4458 0.526211 GCCAAGATTTCCCGTTCACC 59.474 55.000 0.00 0.00 0.00 4.02
1693 4459 0.802494 CCAAGATTTCCCGTTCACCG 59.198 55.000 0.00 0.00 0.00 4.94
1695 4461 2.356135 CAAGATTTCCCGTTCACCGAT 58.644 47.619 0.00 0.00 39.56 4.18
1703 4469 1.396996 CCCGTTCACCGATGTTCATTC 59.603 52.381 0.00 0.00 39.56 2.67
1713 4479 8.512966 TCACCGATGTTCATTCCATATTTTAA 57.487 30.769 0.00 0.00 0.00 1.52
1753 4544 7.195374 AGGTTAATTAGTTGGCTGACATCTA 57.805 36.000 0.00 0.00 31.74 1.98
1789 4580 7.362401 GCCTAGGTGATTTTAGCCATGAATATG 60.362 40.741 11.31 0.00 0.00 1.78
1818 4609 4.805219 ACAATGCGTTGTCCCTAAAATTC 58.195 39.130 18.63 0.00 45.14 2.17
1820 4611 5.708230 ACAATGCGTTGTCCCTAAAATTCTA 59.292 36.000 18.63 0.00 45.14 2.10
1821 4612 6.128007 ACAATGCGTTGTCCCTAAAATTCTAG 60.128 38.462 18.63 0.00 45.14 2.43
1822 4613 5.155278 TGCGTTGTCCCTAAAATTCTAGA 57.845 39.130 0.00 0.00 0.00 2.43
1823 4614 5.741011 TGCGTTGTCCCTAAAATTCTAGAT 58.259 37.500 0.00 0.00 0.00 1.98
1824 4615 6.177610 TGCGTTGTCCCTAAAATTCTAGATT 58.822 36.000 0.00 0.00 0.00 2.40
1825 4616 6.093495 TGCGTTGTCCCTAAAATTCTAGATTG 59.907 38.462 0.00 0.00 0.00 2.67
1827 4618 6.093495 CGTTGTCCCTAAAATTCTAGATTGCA 59.907 38.462 0.00 0.00 0.00 4.08
1828 4619 7.251281 GTTGTCCCTAAAATTCTAGATTGCAC 58.749 38.462 0.00 0.00 0.00 4.57
1829 4620 5.885912 TGTCCCTAAAATTCTAGATTGCACC 59.114 40.000 0.00 0.00 0.00 5.01
1830 4621 5.007724 GTCCCTAAAATTCTAGATTGCACCG 59.992 44.000 0.00 0.00 0.00 4.94
1832 4623 5.765182 CCCTAAAATTCTAGATTGCACCGAT 59.235 40.000 0.00 0.00 0.00 4.18
1833 4624 6.934645 CCCTAAAATTCTAGATTGCACCGATA 59.065 38.462 0.00 0.00 0.00 2.92
1834 4625 7.095187 CCCTAAAATTCTAGATTGCACCGATAC 60.095 40.741 0.00 0.00 0.00 2.24
1835 4626 7.441157 CCTAAAATTCTAGATTGCACCGATACA 59.559 37.037 0.00 0.00 0.00 2.29
1836 4627 6.851222 AAATTCTAGATTGCACCGATACAG 57.149 37.500 0.00 0.00 0.00 2.74
1838 4629 5.791336 TTCTAGATTGCACCGATACAGAT 57.209 39.130 0.00 0.00 0.00 2.90
1839 4630 5.126396 TCTAGATTGCACCGATACAGATG 57.874 43.478 0.00 0.00 0.00 2.90
1840 4631 2.487934 AGATTGCACCGATACAGATGC 58.512 47.619 0.00 0.00 38.59 3.91
1841 4632 1.193203 GATTGCACCGATACAGATGCG 59.807 52.381 0.00 0.00 41.07 4.73
1842 4633 1.428370 TTGCACCGATACAGATGCGC 61.428 55.000 0.00 0.00 41.07 6.09
1843 4634 2.932083 GCACCGATACAGATGCGCG 61.932 63.158 0.00 0.00 0.00 6.86
1844 4635 1.588932 CACCGATACAGATGCGCGT 60.589 57.895 8.43 0.00 0.00 6.01
1845 4636 0.317519 CACCGATACAGATGCGCGTA 60.318 55.000 8.43 2.40 0.00 4.42
1848 4639 1.401018 CCGATACAGATGCGCGTATCA 60.401 52.381 33.49 17.46 42.67 2.15
1849 4640 1.907606 CGATACAGATGCGCGTATCAG 59.092 52.381 33.49 28.71 42.67 2.90
1850 4641 2.665794 CGATACAGATGCGCGTATCAGT 60.666 50.000 33.49 32.06 42.67 3.41
1851 4642 3.424433 CGATACAGATGCGCGTATCAGTA 60.424 47.826 32.48 32.48 42.67 2.74
1853 4644 2.935042 ACAGATGCGCGTATCAGTATC 58.065 47.619 33.49 12.13 0.00 2.24
1855 4646 2.913590 CAGATGCGCGTATCAGTATCAG 59.086 50.000 33.49 13.59 32.96 2.90
1856 4647 2.095008 AGATGCGCGTATCAGTATCAGG 60.095 50.000 33.49 0.00 32.96 3.86
1857 4648 0.313987 TGCGCGTATCAGTATCAGGG 59.686 55.000 8.43 0.00 0.00 4.45
1858 4649 1.009389 GCGCGTATCAGTATCAGGGC 61.009 60.000 8.43 0.00 0.00 5.19
1859 4650 0.729478 CGCGTATCAGTATCAGGGCG 60.729 60.000 0.00 0.00 36.29 6.13
1861 4652 1.202582 GCGTATCAGTATCAGGGCGAT 59.797 52.381 0.00 0.00 38.21 4.58
1862 4653 2.422479 GCGTATCAGTATCAGGGCGATA 59.578 50.000 0.00 0.00 35.39 2.92
1869 4660 3.417690 GTATCAGGGCGATACGGATAC 57.582 52.381 8.18 8.18 45.33 2.24
1870 4661 1.919240 ATCAGGGCGATACGGATACA 58.081 50.000 0.00 0.00 30.32 2.29
1871 4662 1.919240 TCAGGGCGATACGGATACAT 58.081 50.000 0.00 0.00 0.00 2.29
1872 4663 3.076079 TCAGGGCGATACGGATACATA 57.924 47.619 0.00 0.00 0.00 2.29
1873 4664 3.423749 TCAGGGCGATACGGATACATAA 58.576 45.455 0.00 0.00 0.00 1.90
1874 4665 3.827876 TCAGGGCGATACGGATACATAAA 59.172 43.478 0.00 0.00 0.00 1.40
1876 4667 5.653330 TCAGGGCGATACGGATACATAAATA 59.347 40.000 0.00 0.00 0.00 1.40
1878 4669 4.736793 GGGCGATACGGATACATAAATACG 59.263 45.833 0.00 0.00 39.19 3.06
1881 4672 6.023435 GCGATACGGATACATAAATACGTCA 58.977 40.000 0.00 0.00 42.79 4.35
1882 4673 6.690098 GCGATACGGATACATAAATACGTCAT 59.310 38.462 0.00 0.00 42.79 3.06
1883 4674 7.219535 GCGATACGGATACATAAATACGTCATT 59.780 37.037 0.00 0.00 42.79 2.57
1887 4678 8.294341 ACGGATACATAAATACGTCATTTCTG 57.706 34.615 0.00 3.21 42.79 3.02
1888 4679 8.139350 ACGGATACATAAATACGTCATTTCTGA 58.861 33.333 15.74 6.64 42.79 3.27
1889 4680 8.974408 CGGATACATAAATACGTCATTTCTGAA 58.026 33.333 15.74 0.00 37.93 3.02
1893 4684 8.895932 ACATAAATACGTCATTTCTGAAAAGC 57.104 30.769 6.95 0.15 37.93 3.51
1894 4685 7.692291 ACATAAATACGTCATTTCTGAAAAGCG 59.308 33.333 6.95 13.18 37.93 4.68
1900 4691 5.350365 ACGTCATTTCTGAAAAGCGCTAATA 59.650 36.000 12.05 0.00 31.85 0.98
1902 4693 5.672856 GTCATTTCTGAAAAGCGCTAATACG 59.327 40.000 12.05 0.00 31.85 3.06
1903 4694 4.593597 TTTCTGAAAAGCGCTAATACGG 57.406 40.909 12.05 8.30 0.00 4.02
1904 4695 2.546778 TCTGAAAAGCGCTAATACGGG 58.453 47.619 12.05 0.00 0.00 5.28
1905 4696 1.597663 CTGAAAAGCGCTAATACGGGG 59.402 52.381 12.05 0.00 0.00 5.73
1906 4697 1.207570 TGAAAAGCGCTAATACGGGGA 59.792 47.619 12.05 0.00 0.00 4.81
1907 4698 2.158871 TGAAAAGCGCTAATACGGGGAT 60.159 45.455 12.05 0.00 0.00 3.85
1908 4699 3.069872 TGAAAAGCGCTAATACGGGGATA 59.930 43.478 12.05 0.00 0.00 2.59
1910 4701 0.524862 AGCGCTAATACGGGGATACG 59.475 55.000 8.99 0.00 40.31 3.06
1914 4705 2.727798 CGCTAATACGGGGATACGTTTG 59.272 50.000 0.00 0.00 46.25 2.93
1915 4706 3.550639 CGCTAATACGGGGATACGTTTGA 60.551 47.826 0.00 0.00 46.25 2.69
1916 4707 3.737774 GCTAATACGGGGATACGTTTGAC 59.262 47.826 0.00 0.00 46.25 3.18
1917 4708 4.500375 GCTAATACGGGGATACGTTTGACT 60.500 45.833 0.00 0.00 46.25 3.41
1918 4709 5.278463 GCTAATACGGGGATACGTTTGACTA 60.278 44.000 0.00 0.00 46.25 2.59
1919 4710 5.796424 AATACGGGGATACGTTTGACTAT 57.204 39.130 0.00 0.00 46.25 2.12
1922 4713 4.835678 ACGGGGATACGTTTGACTATTTT 58.164 39.130 0.00 0.00 46.25 1.82
1923 4714 5.247862 ACGGGGATACGTTTGACTATTTTT 58.752 37.500 0.00 0.00 46.25 1.94
1958 4749 9.918630 AAATATGTTATCAATTAGGCATCAAGC 57.081 29.630 0.00 0.00 44.65 4.01
1976 4767 9.512435 GCATCAAGCCATTTAGCATATATTTAG 57.488 33.333 0.00 0.00 37.23 1.85
1979 4770 9.791801 TCAAGCCATTTAGCATATATTTAGTCA 57.208 29.630 0.00 0.00 34.23 3.41
1981 4772 9.799106 AAGCCATTTAGCATATATTTAGTCAGT 57.201 29.630 0.00 0.00 34.23 3.41
1982 4773 9.224267 AGCCATTTAGCATATATTTAGTCAGTG 57.776 33.333 0.00 0.00 34.23 3.66
1983 4774 7.965107 GCCATTTAGCATATATTTAGTCAGTGC 59.035 37.037 0.00 0.00 0.00 4.40
1984 4775 9.002600 CCATTTAGCATATATTTAGTCAGTGCA 57.997 33.333 0.00 0.00 33.80 4.57
1986 4777 9.784531 ATTTAGCATATATTTAGTCAGTGCAGT 57.215 29.630 0.00 0.00 33.80 4.40
1987 4778 8.818141 TTAGCATATATTTAGTCAGTGCAGTC 57.182 34.615 0.00 0.00 33.80 3.51
1988 4779 6.226787 AGCATATATTTAGTCAGTGCAGTCC 58.773 40.000 0.00 0.00 33.80 3.85
1989 4780 5.991606 GCATATATTTAGTCAGTGCAGTCCA 59.008 40.000 0.00 0.00 0.00 4.02
1990 4781 6.652481 GCATATATTTAGTCAGTGCAGTCCAT 59.348 38.462 0.00 0.00 0.00 3.41
1991 4782 7.173907 GCATATATTTAGTCAGTGCAGTCCATT 59.826 37.037 0.00 0.00 0.00 3.16
1992 4783 6.932356 ATATTTAGTCAGTGCAGTCCATTG 57.068 37.500 0.00 0.00 32.86 2.82
1993 4784 3.769739 TTAGTCAGTGCAGTCCATTGT 57.230 42.857 0.00 0.00 33.32 2.71
1994 4785 2.175878 AGTCAGTGCAGTCCATTGTC 57.824 50.000 0.00 0.00 33.32 3.18
1995 4786 1.696336 AGTCAGTGCAGTCCATTGTCT 59.304 47.619 0.00 0.00 33.32 3.41
1996 4787 2.105477 AGTCAGTGCAGTCCATTGTCTT 59.895 45.455 0.00 0.00 33.32 3.01
1997 4788 2.481952 GTCAGTGCAGTCCATTGTCTTC 59.518 50.000 0.00 0.00 33.32 2.87
1998 4789 2.369860 TCAGTGCAGTCCATTGTCTTCT 59.630 45.455 0.00 0.00 33.32 2.85
1999 4790 3.578282 TCAGTGCAGTCCATTGTCTTCTA 59.422 43.478 0.00 0.00 33.32 2.10
2000 4791 4.223700 TCAGTGCAGTCCATTGTCTTCTAT 59.776 41.667 0.00 0.00 33.32 1.98
2001 4792 4.569966 CAGTGCAGTCCATTGTCTTCTATC 59.430 45.833 0.00 0.00 0.00 2.08
2002 4793 4.469227 AGTGCAGTCCATTGTCTTCTATCT 59.531 41.667 0.00 0.00 0.00 1.98
2003 4794 5.046014 AGTGCAGTCCATTGTCTTCTATCTT 60.046 40.000 0.00 0.00 0.00 2.40
2004 4795 5.293079 GTGCAGTCCATTGTCTTCTATCTTC 59.707 44.000 0.00 0.00 0.00 2.87
2005 4796 5.188555 TGCAGTCCATTGTCTTCTATCTTCT 59.811 40.000 0.00 0.00 0.00 2.85
2006 4797 6.112058 GCAGTCCATTGTCTTCTATCTTCTT 58.888 40.000 0.00 0.00 0.00 2.52
2007 4798 7.093333 TGCAGTCCATTGTCTTCTATCTTCTTA 60.093 37.037 0.00 0.00 0.00 2.10
2008 4799 7.930865 GCAGTCCATTGTCTTCTATCTTCTTAT 59.069 37.037 0.00 0.00 0.00 1.73
2009 4800 9.474920 CAGTCCATTGTCTTCTATCTTCTTATC 57.525 37.037 0.00 0.00 0.00 1.75
2010 4801 8.646900 AGTCCATTGTCTTCTATCTTCTTATCC 58.353 37.037 0.00 0.00 0.00 2.59
2011 4802 8.424918 GTCCATTGTCTTCTATCTTCTTATCCA 58.575 37.037 0.00 0.00 0.00 3.41
2012 4803 9.163894 TCCATTGTCTTCTATCTTCTTATCCAT 57.836 33.333 0.00 0.00 0.00 3.41
2013 4804 9.217278 CCATTGTCTTCTATCTTCTTATCCATG 57.783 37.037 0.00 0.00 0.00 3.66
2014 4805 9.993454 CATTGTCTTCTATCTTCTTATCCATGA 57.007 33.333 0.00 0.00 0.00 3.07
2018 4809 9.651913 GTCTTCTATCTTCTTATCCATGATTCC 57.348 37.037 0.00 0.00 0.00 3.01
2019 4810 9.384849 TCTTCTATCTTCTTATCCATGATTCCA 57.615 33.333 0.00 0.00 0.00 3.53
2021 4812 9.784531 TTCTATCTTCTTATCCATGATTCCAAC 57.215 33.333 0.00 0.00 0.00 3.77
2022 4813 8.937835 TCTATCTTCTTATCCATGATTCCAACA 58.062 33.333 0.00 0.00 0.00 3.33
2023 4814 9.565090 CTATCTTCTTATCCATGATTCCAACAA 57.435 33.333 0.00 0.00 0.00 2.83
2024 4815 8.827832 ATCTTCTTATCCATGATTCCAACAAA 57.172 30.769 0.00 0.00 0.00 2.83
2025 4816 8.648698 TCTTCTTATCCATGATTCCAACAAAA 57.351 30.769 0.00 0.00 0.00 2.44
2026 4817 8.742777 TCTTCTTATCCATGATTCCAACAAAAG 58.257 33.333 0.00 0.00 0.00 2.27
2027 4818 6.866480 TCTTATCCATGATTCCAACAAAAGC 58.134 36.000 0.00 0.00 0.00 3.51
2028 4819 6.436847 TCTTATCCATGATTCCAACAAAAGCA 59.563 34.615 0.00 0.00 0.00 3.91
2029 4820 4.952071 TCCATGATTCCAACAAAAGCAA 57.048 36.364 0.00 0.00 0.00 3.91
2030 4821 4.885413 TCCATGATTCCAACAAAAGCAAG 58.115 39.130 0.00 0.00 0.00 4.01
2031 4822 4.588106 TCCATGATTCCAACAAAAGCAAGA 59.412 37.500 0.00 0.00 0.00 3.02
2032 4823 5.070180 TCCATGATTCCAACAAAAGCAAGAA 59.930 36.000 0.00 0.00 0.00 2.52
2033 4824 5.178067 CCATGATTCCAACAAAAGCAAGAAC 59.822 40.000 0.00 0.00 0.00 3.01
2034 4825 4.692228 TGATTCCAACAAAAGCAAGAACC 58.308 39.130 0.00 0.00 0.00 3.62
2035 4826 4.161189 TGATTCCAACAAAAGCAAGAACCA 59.839 37.500 0.00 0.00 0.00 3.67
2036 4827 4.543590 TTCCAACAAAAGCAAGAACCAA 57.456 36.364 0.00 0.00 0.00 3.67
2037 4828 3.855858 TCCAACAAAAGCAAGAACCAAC 58.144 40.909 0.00 0.00 0.00 3.77
2038 4829 3.259374 TCCAACAAAAGCAAGAACCAACA 59.741 39.130 0.00 0.00 0.00 3.33
2039 4830 3.618150 CCAACAAAAGCAAGAACCAACAG 59.382 43.478 0.00 0.00 0.00 3.16
2040 4831 2.892374 ACAAAAGCAAGAACCAACAGC 58.108 42.857 0.00 0.00 0.00 4.40
2041 4832 2.233431 ACAAAAGCAAGAACCAACAGCA 59.767 40.909 0.00 0.00 0.00 4.41
2042 4833 3.260740 CAAAAGCAAGAACCAACAGCAA 58.739 40.909 0.00 0.00 0.00 3.91
2043 4834 3.608316 AAAGCAAGAACCAACAGCAAA 57.392 38.095 0.00 0.00 0.00 3.68
2044 4835 2.584492 AGCAAGAACCAACAGCAAAC 57.416 45.000 0.00 0.00 0.00 2.93
2045 4836 1.199624 GCAAGAACCAACAGCAAACG 58.800 50.000 0.00 0.00 0.00 3.60
2046 4837 1.838913 CAAGAACCAACAGCAAACGG 58.161 50.000 0.00 0.00 0.00 4.44
2047 4838 0.744281 AAGAACCAACAGCAAACGGG 59.256 50.000 0.00 0.00 0.00 5.28
2048 4839 0.395173 AGAACCAACAGCAAACGGGT 60.395 50.000 0.00 0.00 0.00 5.28
2049 4840 1.134037 AGAACCAACAGCAAACGGGTA 60.134 47.619 0.00 0.00 0.00 3.69
2050 4841 1.265905 GAACCAACAGCAAACGGGTAG 59.734 52.381 0.00 0.00 0.00 3.18
2051 4842 1.170290 ACCAACAGCAAACGGGTAGC 61.170 55.000 0.00 0.00 0.00 3.58
2052 4843 1.169661 CCAACAGCAAACGGGTAGCA 61.170 55.000 0.00 0.00 0.00 3.49
2053 4844 0.238289 CAACAGCAAACGGGTAGCAG 59.762 55.000 0.00 0.00 0.00 4.24
2054 4845 1.515521 AACAGCAAACGGGTAGCAGC 61.516 55.000 0.00 0.00 0.00 5.25
2055 4846 1.965930 CAGCAAACGGGTAGCAGCA 60.966 57.895 0.00 0.00 0.00 4.41
2056 4847 1.228124 AGCAAACGGGTAGCAGCAA 60.228 52.632 0.00 0.00 0.00 3.91
2057 4848 0.609131 AGCAAACGGGTAGCAGCAAT 60.609 50.000 0.00 0.00 0.00 3.56
2058 4849 0.243636 GCAAACGGGTAGCAGCAATT 59.756 50.000 0.00 0.00 0.00 2.32
2059 4850 1.470890 GCAAACGGGTAGCAGCAATTA 59.529 47.619 0.00 0.00 0.00 1.40
2060 4851 2.731027 GCAAACGGGTAGCAGCAATTAC 60.731 50.000 0.00 0.00 0.00 1.89
2061 4852 1.746470 AACGGGTAGCAGCAATTACC 58.254 50.000 0.00 0.00 0.00 2.85
2062 4853 0.616371 ACGGGTAGCAGCAATTACCA 59.384 50.000 10.66 0.00 34.41 3.25
2063 4854 1.003812 ACGGGTAGCAGCAATTACCAA 59.996 47.619 10.66 0.00 34.41 3.67
2064 4855 2.088423 CGGGTAGCAGCAATTACCAAA 58.912 47.619 10.66 0.00 34.41 3.28
2065 4856 2.159435 CGGGTAGCAGCAATTACCAAAC 60.159 50.000 10.66 0.00 34.41 2.93
2066 4857 2.823154 GGGTAGCAGCAATTACCAAACA 59.177 45.455 10.66 0.00 34.41 2.83
2067 4858 3.447229 GGGTAGCAGCAATTACCAAACAT 59.553 43.478 10.66 0.00 34.41 2.71
2068 4859 4.642885 GGGTAGCAGCAATTACCAAACATA 59.357 41.667 10.66 0.00 34.41 2.29
2069 4860 5.126384 GGGTAGCAGCAATTACCAAACATAA 59.874 40.000 10.66 0.00 34.41 1.90
2070 4861 6.350612 GGGTAGCAGCAATTACCAAACATAAA 60.351 38.462 10.66 0.00 34.41 1.40
2071 4862 7.093992 GGTAGCAGCAATTACCAAACATAAAA 58.906 34.615 4.75 0.00 33.04 1.52
2072 4863 7.275560 GGTAGCAGCAATTACCAAACATAAAAG 59.724 37.037 4.75 0.00 33.04 2.27
2073 4864 6.758254 AGCAGCAATTACCAAACATAAAAGT 58.242 32.000 0.00 0.00 0.00 2.66
2074 4865 7.891561 AGCAGCAATTACCAAACATAAAAGTA 58.108 30.769 0.00 0.00 0.00 2.24
2075 4866 8.028938 AGCAGCAATTACCAAACATAAAAGTAG 58.971 33.333 0.00 0.00 0.00 2.57
2076 4867 7.812669 GCAGCAATTACCAAACATAAAAGTAGT 59.187 33.333 0.00 0.00 0.00 2.73
2091 4882 9.810545 CATAAAAGTAGTAGAGAGAAAGGAAGG 57.189 37.037 0.00 0.00 0.00 3.46
2092 4883 6.860790 AAAGTAGTAGAGAGAAAGGAAGGG 57.139 41.667 0.00 0.00 0.00 3.95
2093 4884 4.874199 AGTAGTAGAGAGAAAGGAAGGGG 58.126 47.826 0.00 0.00 0.00 4.79
2094 4885 3.123392 AGTAGAGAGAAAGGAAGGGGG 57.877 52.381 0.00 0.00 0.00 5.40
2095 4886 2.660556 AGTAGAGAGAAAGGAAGGGGGA 59.339 50.000 0.00 0.00 0.00 4.81
2096 4887 2.262266 AGAGAGAAAGGAAGGGGGAG 57.738 55.000 0.00 0.00 0.00 4.30
2097 4888 1.208706 GAGAGAAAGGAAGGGGGAGG 58.791 60.000 0.00 0.00 0.00 4.30
2098 4889 0.800239 AGAGAAAGGAAGGGGGAGGA 59.200 55.000 0.00 0.00 0.00 3.71
2099 4890 1.208706 GAGAAAGGAAGGGGGAGGAG 58.791 60.000 0.00 0.00 0.00 3.69
2100 4891 0.253394 AGAAAGGAAGGGGGAGGAGG 60.253 60.000 0.00 0.00 0.00 4.30
2101 4892 0.253207 GAAAGGAAGGGGGAGGAGGA 60.253 60.000 0.00 0.00 0.00 3.71
2102 4893 0.198696 AAAGGAAGGGGGAGGAGGAA 59.801 55.000 0.00 0.00 0.00 3.36
2391 5182 2.969628 CCCTTCACTGGCACTACTAG 57.030 55.000 0.00 0.00 0.00 2.57
2392 5183 2.457598 CCCTTCACTGGCACTACTAGA 58.542 52.381 0.00 0.00 0.00 2.43
2393 5184 2.166664 CCCTTCACTGGCACTACTAGAC 59.833 54.545 0.00 0.00 0.00 2.59
2394 5185 2.166664 CCTTCACTGGCACTACTAGACC 59.833 54.545 0.00 0.00 0.00 3.85
2395 5186 2.901338 TCACTGGCACTACTAGACCT 57.099 50.000 0.00 0.00 0.00 3.85
2396 5187 3.170991 TCACTGGCACTACTAGACCTT 57.829 47.619 0.00 0.00 0.00 3.50
2397 5188 2.826128 TCACTGGCACTACTAGACCTTG 59.174 50.000 0.00 0.00 0.00 3.61
2398 5189 2.826128 CACTGGCACTACTAGACCTTGA 59.174 50.000 0.00 0.00 0.00 3.02
2399 5190 3.093057 ACTGGCACTACTAGACCTTGAG 58.907 50.000 0.00 0.00 0.00 3.02
2400 5191 3.245300 ACTGGCACTACTAGACCTTGAGA 60.245 47.826 0.00 0.00 0.00 3.27
2401 5192 3.357203 TGGCACTACTAGACCTTGAGAG 58.643 50.000 0.00 0.00 0.00 3.20
2412 5203 2.557920 CCTTGAGAGGTATCATGGGC 57.442 55.000 0.00 0.00 39.62 5.36
2413 5204 1.270518 CCTTGAGAGGTATCATGGGCG 60.271 57.143 0.00 0.00 39.62 6.13
2414 5205 1.414181 CTTGAGAGGTATCATGGGCGT 59.586 52.381 0.00 0.00 0.00 5.68
2415 5206 2.375014 TGAGAGGTATCATGGGCGTA 57.625 50.000 0.00 0.00 0.00 4.42
2416 5207 2.889512 TGAGAGGTATCATGGGCGTAT 58.110 47.619 0.00 0.00 0.00 3.06
2417 5208 2.826128 TGAGAGGTATCATGGGCGTATC 59.174 50.000 0.00 0.00 0.00 2.24
2418 5209 2.826128 GAGAGGTATCATGGGCGTATCA 59.174 50.000 0.00 0.00 0.00 2.15
2419 5210 2.828520 AGAGGTATCATGGGCGTATCAG 59.171 50.000 0.00 0.00 0.00 2.90
2420 5211 1.902508 AGGTATCATGGGCGTATCAGG 59.097 52.381 0.00 0.00 0.00 3.86
2421 5212 1.899814 GGTATCATGGGCGTATCAGGA 59.100 52.381 0.00 0.00 0.00 3.86
2422 5213 2.301870 GGTATCATGGGCGTATCAGGAA 59.698 50.000 0.00 0.00 0.00 3.36
2423 5214 3.244422 GGTATCATGGGCGTATCAGGAAA 60.244 47.826 0.00 0.00 0.00 3.13
2424 5215 2.620251 TCATGGGCGTATCAGGAAAG 57.380 50.000 0.00 0.00 0.00 2.62
2425 5216 2.115427 TCATGGGCGTATCAGGAAAGA 58.885 47.619 0.00 0.00 0.00 2.52
2426 5217 2.503765 TCATGGGCGTATCAGGAAAGAA 59.496 45.455 0.00 0.00 0.00 2.52
2427 5218 3.136443 TCATGGGCGTATCAGGAAAGAAT 59.864 43.478 0.00 0.00 0.00 2.40
2428 5219 3.194005 TGGGCGTATCAGGAAAGAATC 57.806 47.619 0.00 0.00 0.00 2.52
2429 5220 2.503765 TGGGCGTATCAGGAAAGAATCA 59.496 45.455 0.00 0.00 0.00 2.57
2430 5221 3.134458 GGGCGTATCAGGAAAGAATCAG 58.866 50.000 0.00 0.00 0.00 2.90
2431 5222 3.432326 GGGCGTATCAGGAAAGAATCAGT 60.432 47.826 0.00 0.00 0.00 3.41
2432 5223 4.202223 GGGCGTATCAGGAAAGAATCAGTA 60.202 45.833 0.00 0.00 0.00 2.74
2433 5224 5.511545 GGGCGTATCAGGAAAGAATCAGTAT 60.512 44.000 0.00 0.00 0.00 2.12
2434 5225 5.635700 GGCGTATCAGGAAAGAATCAGTATC 59.364 44.000 0.00 0.00 0.00 2.24
2435 5226 5.343593 GCGTATCAGGAAAGAATCAGTATCG 59.656 44.000 0.00 0.00 0.00 2.92
2436 5227 5.859114 CGTATCAGGAAAGAATCAGTATCGG 59.141 44.000 0.00 0.00 0.00 4.18
2437 5228 6.294010 CGTATCAGGAAAGAATCAGTATCGGA 60.294 42.308 0.00 0.00 0.00 4.55
2438 5229 6.678568 ATCAGGAAAGAATCAGTATCGGAT 57.321 37.500 0.00 0.00 0.00 4.18
2439 5230 7.782897 ATCAGGAAAGAATCAGTATCGGATA 57.217 36.000 0.00 0.00 0.00 2.59
2440 5231 6.982852 TCAGGAAAGAATCAGTATCGGATAC 58.017 40.000 18.31 18.31 35.99 2.24
2470 5261 3.813596 GGATACGCTGGTTGCTGG 58.186 61.111 0.00 0.00 40.11 4.85
2471 5262 1.220749 GGATACGCTGGTTGCTGGA 59.779 57.895 0.00 0.00 40.11 3.86
2472 5263 0.392461 GGATACGCTGGTTGCTGGAA 60.392 55.000 0.00 0.00 40.11 3.53
2473 5264 1.009829 GATACGCTGGTTGCTGGAAG 58.990 55.000 0.00 0.00 40.11 3.46
2474 5265 0.324943 ATACGCTGGTTGCTGGAAGT 59.675 50.000 0.00 0.00 40.11 3.01
2475 5266 0.970640 TACGCTGGTTGCTGGAAGTA 59.029 50.000 0.00 0.00 40.11 2.24
2476 5267 0.324943 ACGCTGGTTGCTGGAAGTAT 59.675 50.000 0.00 0.00 40.11 2.12
2477 5268 1.009829 CGCTGGTTGCTGGAAGTATC 58.990 55.000 0.00 0.00 40.11 2.24
2478 5269 1.009829 GCTGGTTGCTGGAAGTATCG 58.990 55.000 0.00 0.00 38.95 2.92
2479 5270 1.656652 CTGGTTGCTGGAAGTATCGG 58.343 55.000 0.00 0.00 35.30 4.18
2480 5271 0.981183 TGGTTGCTGGAAGTATCGGT 59.019 50.000 0.00 0.00 35.30 4.69
2481 5272 1.338674 TGGTTGCTGGAAGTATCGGTG 60.339 52.381 0.00 0.00 35.30 4.94
2482 5273 1.066430 GGTTGCTGGAAGTATCGGTGA 60.066 52.381 0.00 0.00 35.30 4.02
2483 5274 2.420129 GGTTGCTGGAAGTATCGGTGAT 60.420 50.000 0.00 0.00 35.30 3.06
2484 5275 3.270877 GTTGCTGGAAGTATCGGTGATT 58.729 45.455 0.00 0.00 35.30 2.57
2485 5276 3.627395 TGCTGGAAGTATCGGTGATTT 57.373 42.857 0.00 0.00 35.30 2.17
2486 5277 3.531538 TGCTGGAAGTATCGGTGATTTC 58.468 45.455 0.00 0.00 35.30 2.17
2487 5278 3.197766 TGCTGGAAGTATCGGTGATTTCT 59.802 43.478 0.00 0.00 35.30 2.52
2488 5279 4.192317 GCTGGAAGTATCGGTGATTTCTT 58.808 43.478 0.00 0.00 35.30 2.52
2489 5280 4.034510 GCTGGAAGTATCGGTGATTTCTTG 59.965 45.833 0.00 0.00 35.30 3.02
2490 5281 3.938963 TGGAAGTATCGGTGATTTCTTGC 59.061 43.478 8.05 8.05 0.00 4.01
2491 5282 4.192317 GGAAGTATCGGTGATTTCTTGCT 58.808 43.478 0.00 0.00 0.00 3.91
2492 5283 5.105106 TGGAAGTATCGGTGATTTCTTGCTA 60.105 40.000 12.73 0.00 31.13 3.49
2493 5284 5.815740 GGAAGTATCGGTGATTTCTTGCTAA 59.184 40.000 0.00 0.00 0.00 3.09
2494 5285 6.315393 GGAAGTATCGGTGATTTCTTGCTAAA 59.685 38.462 0.00 0.00 0.00 1.85
2495 5286 7.148306 GGAAGTATCGGTGATTTCTTGCTAAAA 60.148 37.037 0.00 0.00 0.00 1.52
2496 5287 7.681939 AGTATCGGTGATTTCTTGCTAAAAA 57.318 32.000 0.00 0.00 0.00 1.94
2503 5294 8.807581 CGGTGATTTCTTGCTAAAAATTAATCC 58.192 33.333 0.00 0.00 0.00 3.01
2522 5313 1.089920 CAGACTTGGATTTGCCCTCG 58.910 55.000 0.00 0.00 34.97 4.63
2525 5316 2.159382 GACTTGGATTTGCCCTCGAAA 58.841 47.619 0.00 0.00 34.97 3.46
2534 5325 3.658757 TTGCCCTCGAAAATTTCCTTG 57.341 42.857 0.00 0.00 0.00 3.61
2541 5332 5.335191 CCCTCGAAAATTTCCTTGTTCTGAG 60.335 44.000 0.00 0.00 0.00 3.35
2547 5338 8.175716 CGAAAATTTCCTTGTTCTGAGTATACC 58.824 37.037 0.00 0.00 0.00 2.73
2552 5343 3.521937 CCTTGTTCTGAGTATACCCCCAA 59.478 47.826 0.00 0.00 0.00 4.12
2555 5346 5.789574 TGTTCTGAGTATACCCCCAAAAT 57.210 39.130 0.00 0.00 0.00 1.82
2556 5347 6.147437 TGTTCTGAGTATACCCCCAAAATT 57.853 37.500 0.00 0.00 0.00 1.82
2574 5365 6.290605 CAAAATTTTGTTCCTGGTTCTGGAT 58.709 36.000 20.57 0.00 31.78 3.41
2593 5384 3.629398 GGATATGCCCTTTCTGTCAGTTG 59.371 47.826 0.00 0.00 0.00 3.16
2603 5394 1.202371 TCTGTCAGTTGACCGTGTGTC 60.202 52.381 9.60 0.00 44.15 3.67
2617 5408 5.363101 ACCGTGTGTCGATCTATAAGTAGA 58.637 41.667 0.00 0.00 42.86 2.59
2674 5465 3.884037 ACAGAAAGACCCCTGTCAAAT 57.116 42.857 0.00 0.00 44.33 2.32
2675 5466 4.993705 ACAGAAAGACCCCTGTCAAATA 57.006 40.909 0.00 0.00 44.33 1.40
2676 5467 4.911390 ACAGAAAGACCCCTGTCAAATAG 58.089 43.478 0.00 0.00 44.33 1.73
2677 5468 4.263506 ACAGAAAGACCCCTGTCAAATAGG 60.264 45.833 0.00 0.00 44.33 2.57
2679 5470 4.601857 AGAAAGACCCCTGTCAAATAGGAA 59.398 41.667 0.00 0.00 44.33 3.36
2680 5471 5.074515 AGAAAGACCCCTGTCAAATAGGAAA 59.925 40.000 0.00 0.00 44.33 3.13
2681 5472 5.536497 AAGACCCCTGTCAAATAGGAAAT 57.464 39.130 0.00 0.00 44.33 2.17
2683 5474 5.510430 AGACCCCTGTCAAATAGGAAATTC 58.490 41.667 0.00 0.00 44.33 2.17
2685 5476 5.903923 ACCCCTGTCAAATAGGAAATTCTT 58.096 37.500 0.00 0.00 37.52 2.52
2694 5513 9.521503 GTCAAATAGGAAATTCTTTAATGAGGC 57.478 33.333 0.00 0.00 0.00 4.70
2724 5543 5.127845 TGTTTGCTGGACTGGTTAATGAAAA 59.872 36.000 0.00 0.00 0.00 2.29
2726 5545 4.469657 TGCTGGACTGGTTAATGAAAACT 58.530 39.130 0.00 0.00 0.00 2.66
2727 5546 4.278170 TGCTGGACTGGTTAATGAAAACTG 59.722 41.667 0.00 0.00 0.00 3.16
2728 5547 4.798574 CTGGACTGGTTAATGAAAACTGC 58.201 43.478 0.00 0.00 0.00 4.40
2729 5548 4.469657 TGGACTGGTTAATGAAAACTGCT 58.530 39.130 0.00 0.00 0.00 4.24
2730 5549 4.278170 TGGACTGGTTAATGAAAACTGCTG 59.722 41.667 0.00 0.00 0.00 4.41
2731 5550 4.321230 GGACTGGTTAATGAAAACTGCTGG 60.321 45.833 0.00 0.00 0.00 4.85
2759 5578 7.765695 TTTGTTCTGAATCTCAGGCTTATTT 57.234 32.000 3.92 0.00 44.39 1.40
2792 5611 4.013728 ACTTGCTGTTGTTAGTGGTTTCA 58.986 39.130 0.00 0.00 0.00 2.69
2795 5614 6.320164 ACTTGCTGTTGTTAGTGGTTTCATTA 59.680 34.615 0.00 0.00 0.00 1.90
2797 5616 6.734137 TGCTGTTGTTAGTGGTTTCATTAAG 58.266 36.000 0.00 0.00 0.00 1.85
2798 5617 6.544197 TGCTGTTGTTAGTGGTTTCATTAAGA 59.456 34.615 0.00 0.00 0.00 2.10
2799 5618 7.067615 TGCTGTTGTTAGTGGTTTCATTAAGAA 59.932 33.333 0.00 0.00 30.10 2.52
2800 5619 7.591426 GCTGTTGTTAGTGGTTTCATTAAGAAG 59.409 37.037 0.00 0.00 37.57 2.85
2801 5620 8.740123 TGTTGTTAGTGGTTTCATTAAGAAGA 57.260 30.769 0.00 0.00 37.57 2.87
2802 5621 9.349713 TGTTGTTAGTGGTTTCATTAAGAAGAT 57.650 29.630 0.00 0.00 37.57 2.40
2803 5622 9.827411 GTTGTTAGTGGTTTCATTAAGAAGATC 57.173 33.333 0.00 0.00 37.57 2.75
2833 5652 6.734137 TCGTATGTTCAAGAAATGCAAAGTT 58.266 32.000 0.00 0.00 0.00 2.66
2843 5662 6.833342 AGAAATGCAAAGTTTGTTGTGATC 57.167 33.333 16.70 8.33 0.00 2.92
2848 5667 7.744087 ATGCAAAGTTTGTTGTGATCTAGTA 57.256 32.000 16.70 0.00 0.00 1.82
2849 5668 7.189693 TGCAAAGTTTGTTGTGATCTAGTAG 57.810 36.000 16.70 0.00 0.00 2.57
2850 5669 6.765989 TGCAAAGTTTGTTGTGATCTAGTAGT 59.234 34.615 16.70 0.00 0.00 2.73
2851 5670 7.282224 TGCAAAGTTTGTTGTGATCTAGTAGTT 59.718 33.333 16.70 0.00 0.00 2.24
2852 5671 8.129211 GCAAAGTTTGTTGTGATCTAGTAGTTT 58.871 33.333 16.70 0.00 0.00 2.66
2855 5674 9.826574 AAGTTTGTTGTGATCTAGTAGTTTACA 57.173 29.630 2.55 2.55 0.00 2.41
2860 5679 8.148351 TGTTGTGATCTAGTAGTTTACAGCTTT 58.852 33.333 15.93 0.00 0.00 3.51
2873 5692 0.595095 CAGCTTTGGTCTTGTGCCTC 59.405 55.000 0.00 0.00 0.00 4.70
2894 5713 5.279506 CCTCTGTACATGTGTGTAGGTTCTT 60.280 44.000 9.11 0.00 41.29 2.52
2918 5737 1.471287 CATGAGCCAACATCACACCTG 59.529 52.381 0.00 0.00 0.00 4.00
2939 5758 1.960689 AGCGGCACACAATTTTTACCT 59.039 42.857 1.45 0.00 0.00 3.08
2940 5759 2.364002 AGCGGCACACAATTTTTACCTT 59.636 40.909 1.45 0.00 0.00 3.50
3014 5841 2.778299 TGTCACAATCCAACTAGTGCC 58.222 47.619 0.00 0.00 32.25 5.01
3018 5845 2.744202 CACAATCCAACTAGTGCCTGTC 59.256 50.000 0.00 0.00 0.00 3.51
3030 5857 4.357918 AGTGCCTGTCTTTCACTTATGT 57.642 40.909 0.00 0.00 37.78 2.29
3058 5885 6.295745 CCACTCTATGCTAGATGTCCATGAAT 60.296 42.308 0.00 0.00 33.66 2.57
3066 5900 5.638657 GCTAGATGTCCATGAATCTGATGTC 59.361 44.000 12.94 0.00 34.91 3.06
3151 5985 0.036858 AAAGCGACTGAAGGAGCCTC 60.037 55.000 0.00 0.00 0.00 4.70
3162 5996 0.688087 AGGAGCCTCCCCTAAAGTCG 60.688 60.000 7.26 0.00 37.19 4.18
3189 6023 0.826715 CAGCCCACTAGAAGCAGCTA 59.173 55.000 0.00 0.00 0.00 3.32
3190 6024 1.415659 CAGCCCACTAGAAGCAGCTAT 59.584 52.381 0.00 0.00 0.00 2.97
3191 6025 2.122768 AGCCCACTAGAAGCAGCTATT 58.877 47.619 0.00 0.00 0.00 1.73
3212 6046 2.903784 TGCTAAACCTAGAAGCAGTCCA 59.096 45.455 0.00 0.00 41.15 4.02
3236 6070 8.190784 CCATTGACAAGTGAAAGTTCTAAAGTT 58.809 33.333 0.00 0.00 0.00 2.66
3380 6214 4.107072 TCCACAAGGAGATCTTTCTGGAT 58.893 43.478 0.00 0.00 39.61 3.41
3627 6463 0.178973 AACCTTTTCCCCTCCCAACG 60.179 55.000 0.00 0.00 0.00 4.10
3821 6657 4.700268 AGTCGCACATATTTTTGCATGA 57.300 36.364 0.00 0.00 38.76 3.07
3865 6701 2.499693 ACTCTTGAAGCTTCTCCCTAGC 59.500 50.000 26.09 0.00 38.93 3.42
3938 6775 1.731160 GCTTCTGCAGCTGTTACAGAG 59.269 52.381 17.40 13.16 46.27 3.35
3954 6791 2.499289 ACAGAGATGTGGATCTGGTGAC 59.501 50.000 7.09 0.00 45.86 3.67
3982 6819 2.092429 TGTGGAATTGCTGGGATACTCC 60.092 50.000 0.00 0.00 35.23 3.85
3999 6836 0.121197 TCCCAGAAATCCACCCCTCT 59.879 55.000 0.00 0.00 0.00 3.69
4000 6837 0.257039 CCCAGAAATCCACCCCTCTG 59.743 60.000 0.00 0.00 35.99 3.35
4180 8115 7.522374 TGCAACTTTTGGTGTTGAAATTAAAC 58.478 30.769 10.29 0.00 45.27 2.01
4213 8148 1.067250 TTTTGGCCGCTGCAAGTTC 59.933 52.632 1.55 0.00 40.13 3.01
4219 8154 0.446222 GCCGCTGCAAGTTCGAATTA 59.554 50.000 0.00 0.00 37.47 1.40
4456 8395 2.944129 CAAACAGAAGGGGGTTCTTGA 58.056 47.619 0.00 0.00 43.54 3.02
4473 8412 2.652941 TGAATTTTGCGCATCTTCCC 57.347 45.000 12.75 0.00 0.00 3.97
4474 8413 2.170166 TGAATTTTGCGCATCTTCCCT 58.830 42.857 12.75 0.00 0.00 4.20
4475 8414 2.094597 TGAATTTTGCGCATCTTCCCTG 60.095 45.455 12.75 0.00 0.00 4.45
4479 8418 0.881118 TTGCGCATCTTCCCTGTTTC 59.119 50.000 12.75 0.00 0.00 2.78
4480 8419 0.036732 TGCGCATCTTCCCTGTTTCT 59.963 50.000 5.66 0.00 0.00 2.52
4481 8420 0.729690 GCGCATCTTCCCTGTTTCTC 59.270 55.000 0.30 0.00 0.00 2.87
4482 8421 1.677217 GCGCATCTTCCCTGTTTCTCT 60.677 52.381 0.30 0.00 0.00 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 7.698163 ATTCCTCCCTGTTAAGTATGAGAAT 57.302 36.000 0.00 0.00 0.00 2.40
57 58 1.822990 CTTACAAGAGTGACCCCGCTA 59.177 52.381 0.00 0.00 32.40 4.26
111 112 5.525378 GCTTTTCTATGAGGGTGACTATGTG 59.475 44.000 0.00 0.00 0.00 3.21
200 2447 9.257651 ACAATATACCAGAGCTTTATCGTAAAC 57.742 33.333 0.00 0.00 0.00 2.01
238 2485 6.048732 TGTCTTTGATGGCTTGTATGTCTA 57.951 37.500 0.00 0.00 0.00 2.59
263 2510 1.679944 GCAAGCAAGACCCAGCATCTA 60.680 52.381 0.00 0.00 0.00 1.98
417 2664 3.565764 TCAATCTGGGGATTAGCACAG 57.434 47.619 0.00 0.00 39.87 3.66
555 2802 3.260632 TCAAGGATGACGAGTTGGATGAA 59.739 43.478 0.00 0.00 0.00 2.57
647 2894 0.539986 GGACAAACCCTAGATGGCGA 59.460 55.000 0.00 0.00 0.00 5.54
663 2910 1.448013 GGCTAGCTGTTGACGGGAC 60.448 63.158 15.72 0.00 0.00 4.46
664 2911 2.978824 GGCTAGCTGTTGACGGGA 59.021 61.111 15.72 0.00 0.00 5.14
690 2942 2.053277 GGGGAGAGGACCGTCTGTC 61.053 68.421 0.00 0.00 43.67 3.51
710 2964 3.249189 TCCTGTTGCCGGGAAGCT 61.249 61.111 9.39 0.00 43.42 3.74
755 3012 3.256136 CCGCCTAGAGTTTTCCGATCTAT 59.744 47.826 0.00 0.00 0.00 1.98
785 3045 3.909258 TTTCGTCTCTGGCGGCGAC 62.909 63.158 12.98 9.31 32.89 5.19
786 3047 2.702751 TTTTTCGTCTCTGGCGGCGA 62.703 55.000 12.98 3.82 0.00 5.54
798 3059 3.396560 CCTCGAGTTTAGGGTTTTTCGT 58.603 45.455 12.31 0.00 0.00 3.85
832 3093 9.559732 TCTTAGTTCTTTGTGATCTCATCAAAA 57.440 29.630 0.00 0.00 41.69 2.44
833 3094 9.559732 TTCTTAGTTCTTTGTGATCTCATCAAA 57.440 29.630 0.00 2.84 41.69 2.69
834 3095 9.212641 CTTCTTAGTTCTTTGTGATCTCATCAA 57.787 33.333 0.00 0.00 41.69 2.57
835 3096 8.588472 TCTTCTTAGTTCTTTGTGATCTCATCA 58.412 33.333 0.00 0.00 36.84 3.07
836 3097 8.994429 TCTTCTTAGTTCTTTGTGATCTCATC 57.006 34.615 0.00 0.00 0.00 2.92
837 3098 7.548780 GCTCTTCTTAGTTCTTTGTGATCTCAT 59.451 37.037 0.00 0.00 0.00 2.90
838 3099 6.870965 GCTCTTCTTAGTTCTTTGTGATCTCA 59.129 38.462 0.00 0.00 0.00 3.27
839 3100 7.096551 AGCTCTTCTTAGTTCTTTGTGATCTC 58.903 38.462 0.00 0.00 0.00 2.75
840 3101 7.003402 AGCTCTTCTTAGTTCTTTGTGATCT 57.997 36.000 0.00 0.00 0.00 2.75
841 3102 7.517321 CAAGCTCTTCTTAGTTCTTTGTGATC 58.483 38.462 0.00 0.00 32.74 2.92
842 3103 6.072783 GCAAGCTCTTCTTAGTTCTTTGTGAT 60.073 38.462 0.00 0.00 32.74 3.06
843 3104 5.237344 GCAAGCTCTTCTTAGTTCTTTGTGA 59.763 40.000 0.00 0.00 32.74 3.58
844 3105 5.238214 AGCAAGCTCTTCTTAGTTCTTTGTG 59.762 40.000 0.00 0.00 32.74 3.33
845 3106 5.372373 AGCAAGCTCTTCTTAGTTCTTTGT 58.628 37.500 0.00 0.00 32.74 2.83
846 3107 5.468072 TGAGCAAGCTCTTCTTAGTTCTTTG 59.532 40.000 21.35 0.00 43.12 2.77
847 3108 5.615289 TGAGCAAGCTCTTCTTAGTTCTTT 58.385 37.500 21.35 0.00 43.12 2.52
848 3109 5.011533 TCTGAGCAAGCTCTTCTTAGTTCTT 59.988 40.000 21.35 0.00 43.12 2.52
849 3110 4.526262 TCTGAGCAAGCTCTTCTTAGTTCT 59.474 41.667 21.35 0.00 43.12 3.01
850 3111 4.815269 TCTGAGCAAGCTCTTCTTAGTTC 58.185 43.478 21.35 0.00 43.12 3.01
851 3112 4.819769 CTCTGAGCAAGCTCTTCTTAGTT 58.180 43.478 21.35 0.00 43.12 2.24
852 3113 3.368323 GCTCTGAGCAAGCTCTTCTTAGT 60.368 47.826 24.02 0.00 41.89 2.24
853 3114 3.189285 GCTCTGAGCAAGCTCTTCTTAG 58.811 50.000 24.02 10.99 41.89 2.18
854 3115 3.244033 GCTCTGAGCAAGCTCTTCTTA 57.756 47.619 24.02 1.62 41.89 2.10
875 3136 1.544724 GTAAGTGCTGATTTGGCCCA 58.455 50.000 0.00 0.00 0.00 5.36
928 3191 0.615261 ACGGGGAGAGGAAGAAGGAC 60.615 60.000 0.00 0.00 0.00 3.85
998 3261 4.299316 GGAATCGCGACGCCATGC 62.299 66.667 12.93 5.40 0.00 4.06
1200 3463 4.457496 ACGGGCAGAGCATCGGTG 62.457 66.667 0.00 0.00 42.67 4.94
1201 3464 4.457496 CACGGGCAGAGCATCGGT 62.457 66.667 0.00 0.00 42.67 4.69
1204 3467 4.783621 TGGCACGGGCAGAGCATC 62.784 66.667 13.89 0.00 43.71 3.91
1205 3468 3.650298 AATGGCACGGGCAGAGCAT 62.650 57.895 13.89 1.82 42.43 3.79
1207 3470 3.512516 GAATGGCACGGGCAGAGC 61.513 66.667 13.89 0.00 42.43 4.09
1208 3471 2.930385 ATCGAATGGCACGGGCAGAG 62.930 60.000 13.89 0.00 42.43 3.35
1235 3604 0.323629 TCCATCCTTCACGGTGAACC 59.676 55.000 19.07 0.00 32.21 3.62
1241 3610 2.991250 ACAATTCTCCATCCTTCACGG 58.009 47.619 0.00 0.00 0.00 4.94
1255 3624 7.382218 CACAGTTCCAATCTACCAAAACAATTC 59.618 37.037 0.00 0.00 0.00 2.17
1302 3673 4.632153 AGCAGATATCAAACACCGATACC 58.368 43.478 5.32 0.00 0.00 2.73
1313 3684 5.043248 CGACACACACATAGCAGATATCAA 58.957 41.667 5.32 0.00 0.00 2.57
1316 3687 3.068732 AGCGACACACACATAGCAGATAT 59.931 43.478 0.00 0.00 0.00 1.63
1320 3691 0.717784 CAGCGACACACACATAGCAG 59.282 55.000 0.00 0.00 0.00 4.24
1322 3693 0.716108 GACAGCGACACACACATAGC 59.284 55.000 0.00 0.00 0.00 2.97
1332 4034 4.744570 AGATTCGAATAAAGACAGCGACA 58.255 39.130 11.38 0.00 0.00 4.35
1333 4035 6.994868 ATAGATTCGAATAAAGACAGCGAC 57.005 37.500 11.38 0.00 0.00 5.19
1357 4059 0.311165 CTACCGCTATCCTGACCACG 59.689 60.000 0.00 0.00 0.00 4.94
1381 4083 4.225267 CCCTGTGTTTATCTACCCTTCTGT 59.775 45.833 0.00 0.00 0.00 3.41
1405 4122 1.999735 TGCGAGGCTCGTAAATCAAAG 59.000 47.619 34.41 6.56 42.81 2.77
1414 4131 2.005960 GAGTACCATGCGAGGCTCGT 62.006 60.000 34.41 19.04 42.81 4.18
1422 4139 2.621338 ACATCAACTGAGTACCATGCG 58.379 47.619 0.00 0.00 0.00 4.73
1428 4145 6.376018 AGAGACCTCTAACATCAACTGAGTAC 59.624 42.308 0.00 0.00 38.35 2.73
1429 4146 6.486056 AGAGACCTCTAACATCAACTGAGTA 58.514 40.000 0.00 0.00 38.35 2.59
1430 4147 5.329399 AGAGACCTCTAACATCAACTGAGT 58.671 41.667 0.00 0.00 38.35 3.41
1475 4192 3.505680 GGTATGACTGCCATTGTTGTTCA 59.494 43.478 0.00 0.00 36.71 3.18
1506 4250 8.574251 AAATTACTGATATTGTGTGGTAGCAA 57.426 30.769 0.00 0.00 0.00 3.91
1531 4276 2.885616 ACCCCACTTTTCGACTCTAGA 58.114 47.619 0.00 0.00 0.00 2.43
1539 4284 5.897377 AAATGAGATAACCCCACTTTTCG 57.103 39.130 0.00 0.00 0.00 3.46
1542 4287 6.074648 TCACAAAATGAGATAACCCCACTTT 58.925 36.000 0.00 0.00 31.91 2.66
1591 4336 9.685276 TGGAAACAAATTATATCAGAGTCACAT 57.315 29.630 0.00 0.00 37.44 3.21
1619 4364 9.317936 TGACATATAAAGTCTAATCAGCTTGTG 57.682 33.333 9.31 0.00 36.94 3.33
1639 4384 8.246180 GGCAGAAGATTTCTTGATTTTGACATA 58.754 33.333 0.00 0.00 38.11 2.29
1686 4452 6.377327 AATATGGAATGAACATCGGTGAAC 57.623 37.500 0.65 0.00 0.00 3.18
1690 4456 8.359642 CCATTAAAATATGGAATGAACATCGGT 58.640 33.333 0.00 0.00 46.63 4.69
1692 4458 8.084073 AGCCATTAAAATATGGAATGAACATCG 58.916 33.333 6.82 0.00 46.63 3.84
1753 4544 7.609532 GCTAAAATCACCTAGGCTATGATCAAT 59.390 37.037 9.30 3.94 31.84 2.57
1797 4588 5.059404 AGAATTTTAGGGACAACGCATTG 57.941 39.130 0.00 0.00 41.98 2.82
1803 4594 7.251281 GTGCAATCTAGAATTTTAGGGACAAC 58.749 38.462 0.00 0.00 0.00 3.32
1816 4607 5.532557 CATCTGTATCGGTGCAATCTAGAA 58.467 41.667 0.00 0.00 0.00 2.10
1818 4609 3.677121 GCATCTGTATCGGTGCAATCTAG 59.323 47.826 0.00 0.00 37.52 2.43
1820 4611 2.487934 GCATCTGTATCGGTGCAATCT 58.512 47.619 0.00 0.00 37.52 2.40
1821 4612 1.193203 CGCATCTGTATCGGTGCAATC 59.807 52.381 0.00 0.00 37.44 2.67
1822 4613 1.220529 CGCATCTGTATCGGTGCAAT 58.779 50.000 0.00 0.00 37.44 3.56
1823 4614 1.428370 GCGCATCTGTATCGGTGCAA 61.428 55.000 0.30 0.00 37.44 4.08
1824 4615 1.882625 GCGCATCTGTATCGGTGCA 60.883 57.895 0.30 0.00 37.44 4.57
1825 4616 2.931386 GCGCATCTGTATCGGTGC 59.069 61.111 0.30 0.00 0.00 5.01
1827 4618 0.596577 ATACGCGCATCTGTATCGGT 59.403 50.000 5.73 0.00 0.00 4.69
1828 4619 1.260206 GATACGCGCATCTGTATCGG 58.740 55.000 12.13 0.00 38.06 4.18
1829 4620 1.907606 CTGATACGCGCATCTGTATCG 59.092 52.381 19.51 14.61 46.33 2.92
1830 4621 2.935042 ACTGATACGCGCATCTGTATC 58.065 47.619 24.95 19.94 44.56 2.24
1832 4623 3.500680 TGATACTGATACGCGCATCTGTA 59.499 43.478 29.54 29.54 41.02 2.74
1833 4624 2.293399 TGATACTGATACGCGCATCTGT 59.707 45.455 27.75 27.75 39.52 3.41
1834 4625 2.913590 CTGATACTGATACGCGCATCTG 59.086 50.000 20.71 20.71 0.00 2.90
1835 4626 2.095008 CCTGATACTGATACGCGCATCT 60.095 50.000 19.51 3.75 0.00 2.90
1836 4627 2.254459 CCTGATACTGATACGCGCATC 58.746 52.381 12.50 12.50 0.00 3.91
1838 4629 0.313987 CCCTGATACTGATACGCGCA 59.686 55.000 5.73 0.00 0.00 6.09
1839 4630 1.009389 GCCCTGATACTGATACGCGC 61.009 60.000 5.73 0.00 0.00 6.86
1840 4631 0.729478 CGCCCTGATACTGATACGCG 60.729 60.000 3.53 3.53 0.00 6.01
1841 4632 0.596577 TCGCCCTGATACTGATACGC 59.403 55.000 0.00 0.00 0.00 4.42
1850 4641 3.076079 TGTATCCGTATCGCCCTGATA 57.924 47.619 0.00 0.00 38.57 2.15
1851 4642 1.919240 TGTATCCGTATCGCCCTGAT 58.081 50.000 0.00 0.00 41.30 2.90
1853 4644 3.861276 TTATGTATCCGTATCGCCCTG 57.139 47.619 0.00 0.00 0.00 4.45
1855 4646 4.736793 CGTATTTATGTATCCGTATCGCCC 59.263 45.833 0.00 0.00 0.00 6.13
1856 4647 5.335127 ACGTATTTATGTATCCGTATCGCC 58.665 41.667 0.00 0.00 0.00 5.54
1857 4648 6.023435 TGACGTATTTATGTATCCGTATCGC 58.977 40.000 0.00 0.00 0.00 4.58
1858 4649 8.610855 AATGACGTATTTATGTATCCGTATCG 57.389 34.615 0.00 0.00 0.00 2.92
1861 4652 9.401873 CAGAAATGACGTATTTATGTATCCGTA 57.598 33.333 12.76 0.00 41.06 4.02
1862 4653 8.139350 TCAGAAATGACGTATTTATGTATCCGT 58.861 33.333 16.98 0.00 44.43 4.69
1863 4654 8.515473 TCAGAAATGACGTATTTATGTATCCG 57.485 34.615 16.98 0.00 44.43 4.18
1868 4659 7.692291 CGCTTTTCAGAAATGACGTATTTATGT 59.308 33.333 12.00 0.00 44.43 2.29
1869 4660 7.304849 GCGCTTTTCAGAAATGACGTATTTATG 60.305 37.037 12.00 13.93 45.10 1.90
1870 4661 6.687105 GCGCTTTTCAGAAATGACGTATTTAT 59.313 34.615 12.00 0.00 39.06 1.40
1871 4662 6.019152 GCGCTTTTCAGAAATGACGTATTTA 58.981 36.000 12.00 0.00 39.06 1.40
1872 4663 4.851558 GCGCTTTTCAGAAATGACGTATTT 59.148 37.500 12.00 0.00 41.59 1.40
1873 4664 4.154195 AGCGCTTTTCAGAAATGACGTATT 59.846 37.500 2.64 0.00 0.00 1.89
1874 4665 3.684788 AGCGCTTTTCAGAAATGACGTAT 59.315 39.130 2.64 6.41 0.00 3.06
1876 4667 1.873591 AGCGCTTTTCAGAAATGACGT 59.126 42.857 2.64 0.00 0.00 4.34
1878 4669 5.672856 CGTATTAGCGCTTTTCAGAAATGAC 59.327 40.000 18.68 5.92 0.00 3.06
1879 4670 5.220586 CCGTATTAGCGCTTTTCAGAAATGA 60.221 40.000 18.68 0.00 0.00 2.57
1881 4672 4.035208 CCCGTATTAGCGCTTTTCAGAAAT 59.965 41.667 18.68 10.11 0.00 2.17
1882 4673 3.372822 CCCGTATTAGCGCTTTTCAGAAA 59.627 43.478 18.68 0.97 0.00 2.52
1883 4674 2.933906 CCCGTATTAGCGCTTTTCAGAA 59.066 45.455 18.68 1.90 0.00 3.02
1885 4676 1.597663 CCCCGTATTAGCGCTTTTCAG 59.402 52.381 18.68 4.95 0.00 3.02
1887 4678 1.944032 TCCCCGTATTAGCGCTTTTC 58.056 50.000 18.68 3.20 0.00 2.29
1888 4679 2.632987 ATCCCCGTATTAGCGCTTTT 57.367 45.000 18.68 6.06 0.00 2.27
1889 4680 2.608752 CGTATCCCCGTATTAGCGCTTT 60.609 50.000 18.68 6.49 0.00 3.51
1890 4681 1.068055 CGTATCCCCGTATTAGCGCTT 60.068 52.381 18.68 0.00 0.00 4.68
1891 4682 0.524862 CGTATCCCCGTATTAGCGCT 59.475 55.000 17.26 17.26 0.00 5.92
1892 4683 0.242017 ACGTATCCCCGTATTAGCGC 59.758 55.000 0.00 0.00 39.73 5.92
1893 4684 2.712057 AACGTATCCCCGTATTAGCG 57.288 50.000 0.00 0.00 40.85 4.26
1894 4685 3.737774 GTCAAACGTATCCCCGTATTAGC 59.262 47.826 0.00 0.00 40.85 3.09
1900 4691 4.476628 AAATAGTCAAACGTATCCCCGT 57.523 40.909 0.00 0.00 44.23 5.28
1932 4723 9.918630 GCTTGATGCCTAATTGATAACATATTT 57.081 29.630 0.00 0.00 35.15 1.40
1950 4741 9.512435 CTAAATATATGCTAAATGGCTTGATGC 57.488 33.333 0.00 0.00 41.94 3.91
1953 4744 9.791801 TGACTAAATATATGCTAAATGGCTTGA 57.208 29.630 0.00 0.00 0.00 3.02
1955 4746 9.799106 ACTGACTAAATATATGCTAAATGGCTT 57.201 29.630 0.00 0.00 0.00 4.35
1957 4748 7.965107 GCACTGACTAAATATATGCTAAATGGC 59.035 37.037 0.00 0.00 0.00 4.40
1958 4749 9.002600 TGCACTGACTAAATATATGCTAAATGG 57.997 33.333 0.00 0.00 32.81 3.16
1960 4751 9.784531 ACTGCACTGACTAAATATATGCTAAAT 57.215 29.630 0.00 0.00 32.81 1.40
1961 4752 9.261180 GACTGCACTGACTAAATATATGCTAAA 57.739 33.333 0.00 0.00 32.81 1.85
1962 4753 7.872993 GGACTGCACTGACTAAATATATGCTAA 59.127 37.037 0.00 0.00 32.81 3.09
1963 4754 7.015195 TGGACTGCACTGACTAAATATATGCTA 59.985 37.037 0.00 0.00 32.81 3.49
1964 4755 6.183361 TGGACTGCACTGACTAAATATATGCT 60.183 38.462 0.00 0.00 32.81 3.79
1965 4756 5.991606 TGGACTGCACTGACTAAATATATGC 59.008 40.000 0.00 0.00 0.00 3.14
1966 4757 8.501580 CAATGGACTGCACTGACTAAATATATG 58.498 37.037 0.00 0.00 0.00 1.78
1967 4758 8.213679 ACAATGGACTGCACTGACTAAATATAT 58.786 33.333 0.00 0.00 0.00 0.86
1968 4759 7.564793 ACAATGGACTGCACTGACTAAATATA 58.435 34.615 0.00 0.00 0.00 0.86
1969 4760 6.418101 ACAATGGACTGCACTGACTAAATAT 58.582 36.000 0.00 0.00 0.00 1.28
1970 4761 5.804639 ACAATGGACTGCACTGACTAAATA 58.195 37.500 0.00 0.00 0.00 1.40
1971 4762 4.655963 ACAATGGACTGCACTGACTAAAT 58.344 39.130 0.00 0.00 0.00 1.40
1972 4763 4.065088 GACAATGGACTGCACTGACTAAA 58.935 43.478 0.00 0.00 0.00 1.85
1973 4764 3.324846 AGACAATGGACTGCACTGACTAA 59.675 43.478 0.00 0.00 0.00 2.24
1974 4765 2.899900 AGACAATGGACTGCACTGACTA 59.100 45.455 0.00 0.00 0.00 2.59
1975 4766 1.696336 AGACAATGGACTGCACTGACT 59.304 47.619 0.00 0.00 0.00 3.41
1976 4767 2.175878 AGACAATGGACTGCACTGAC 57.824 50.000 0.00 0.00 0.00 3.51
1977 4768 2.369860 AGAAGACAATGGACTGCACTGA 59.630 45.455 0.00 0.00 0.00 3.41
1978 4769 2.775890 AGAAGACAATGGACTGCACTG 58.224 47.619 0.00 0.00 0.00 3.66
1979 4770 4.469227 AGATAGAAGACAATGGACTGCACT 59.531 41.667 0.00 0.00 0.00 4.40
1980 4771 4.764172 AGATAGAAGACAATGGACTGCAC 58.236 43.478 0.00 0.00 0.00 4.57
1981 4772 5.188555 AGAAGATAGAAGACAATGGACTGCA 59.811 40.000 0.00 0.00 0.00 4.41
1982 4773 5.669477 AGAAGATAGAAGACAATGGACTGC 58.331 41.667 0.00 0.00 0.00 4.40
1983 4774 9.474920 GATAAGAAGATAGAAGACAATGGACTG 57.525 37.037 0.00 0.00 0.00 3.51
1984 4775 8.646900 GGATAAGAAGATAGAAGACAATGGACT 58.353 37.037 0.00 0.00 0.00 3.85
1985 4776 8.424918 TGGATAAGAAGATAGAAGACAATGGAC 58.575 37.037 0.00 0.00 0.00 4.02
1986 4777 8.553085 TGGATAAGAAGATAGAAGACAATGGA 57.447 34.615 0.00 0.00 0.00 3.41
1987 4778 9.217278 CATGGATAAGAAGATAGAAGACAATGG 57.783 37.037 0.00 0.00 0.00 3.16
1988 4779 9.993454 TCATGGATAAGAAGATAGAAGACAATG 57.007 33.333 0.00 0.00 0.00 2.82
1992 4783 9.651913 GGAATCATGGATAAGAAGATAGAAGAC 57.348 37.037 0.00 0.00 0.00 3.01
1993 4784 9.384849 TGGAATCATGGATAAGAAGATAGAAGA 57.615 33.333 0.00 0.00 0.00 2.87
1995 4786 9.784531 GTTGGAATCATGGATAAGAAGATAGAA 57.215 33.333 0.00 0.00 0.00 2.10
1996 4787 8.937835 TGTTGGAATCATGGATAAGAAGATAGA 58.062 33.333 0.00 0.00 0.00 1.98
1997 4788 9.565090 TTGTTGGAATCATGGATAAGAAGATAG 57.435 33.333 0.00 0.00 0.00 2.08
1998 4789 9.919416 TTTGTTGGAATCATGGATAAGAAGATA 57.081 29.630 0.00 0.00 0.00 1.98
1999 4790 8.827832 TTTGTTGGAATCATGGATAAGAAGAT 57.172 30.769 0.00 0.00 0.00 2.40
2000 4791 8.648698 TTTTGTTGGAATCATGGATAAGAAGA 57.351 30.769 0.00 0.00 0.00 2.87
2001 4792 7.490402 GCTTTTGTTGGAATCATGGATAAGAAG 59.510 37.037 0.00 0.00 0.00 2.85
2002 4793 7.039152 TGCTTTTGTTGGAATCATGGATAAGAA 60.039 33.333 0.00 0.00 0.00 2.52
2003 4794 6.436847 TGCTTTTGTTGGAATCATGGATAAGA 59.563 34.615 0.00 0.00 0.00 2.10
2004 4795 6.632909 TGCTTTTGTTGGAATCATGGATAAG 58.367 36.000 0.00 0.00 0.00 1.73
2005 4796 6.602410 TGCTTTTGTTGGAATCATGGATAA 57.398 33.333 0.00 0.00 0.00 1.75
2006 4797 6.436847 TCTTGCTTTTGTTGGAATCATGGATA 59.563 34.615 0.00 0.00 0.00 2.59
2007 4798 5.246656 TCTTGCTTTTGTTGGAATCATGGAT 59.753 36.000 0.00 0.00 0.00 3.41
2008 4799 4.588106 TCTTGCTTTTGTTGGAATCATGGA 59.412 37.500 0.00 0.00 0.00 3.41
2009 4800 4.885413 TCTTGCTTTTGTTGGAATCATGG 58.115 39.130 0.00 0.00 0.00 3.66
2010 4801 5.178067 GGTTCTTGCTTTTGTTGGAATCATG 59.822 40.000 0.00 0.00 0.00 3.07
2011 4802 5.163322 TGGTTCTTGCTTTTGTTGGAATCAT 60.163 36.000 0.00 0.00 0.00 2.45
2012 4803 4.161189 TGGTTCTTGCTTTTGTTGGAATCA 59.839 37.500 0.00 0.00 0.00 2.57
2013 4804 4.692228 TGGTTCTTGCTTTTGTTGGAATC 58.308 39.130 0.00 0.00 0.00 2.52
2014 4805 4.751767 TGGTTCTTGCTTTTGTTGGAAT 57.248 36.364 0.00 0.00 0.00 3.01
2015 4806 4.249661 GTTGGTTCTTGCTTTTGTTGGAA 58.750 39.130 0.00 0.00 0.00 3.53
2016 4807 3.259374 TGTTGGTTCTTGCTTTTGTTGGA 59.741 39.130 0.00 0.00 0.00 3.53
2017 4808 3.594134 TGTTGGTTCTTGCTTTTGTTGG 58.406 40.909 0.00 0.00 0.00 3.77
2018 4809 3.062504 GCTGTTGGTTCTTGCTTTTGTTG 59.937 43.478 0.00 0.00 0.00 3.33
2019 4810 3.261580 GCTGTTGGTTCTTGCTTTTGTT 58.738 40.909 0.00 0.00 0.00 2.83
2020 4811 2.233431 TGCTGTTGGTTCTTGCTTTTGT 59.767 40.909 0.00 0.00 0.00 2.83
2021 4812 2.891112 TGCTGTTGGTTCTTGCTTTTG 58.109 42.857 0.00 0.00 0.00 2.44
2022 4813 3.608316 TTGCTGTTGGTTCTTGCTTTT 57.392 38.095 0.00 0.00 0.00 2.27
2023 4814 3.261580 GTTTGCTGTTGGTTCTTGCTTT 58.738 40.909 0.00 0.00 0.00 3.51
2024 4815 2.735126 CGTTTGCTGTTGGTTCTTGCTT 60.735 45.455 0.00 0.00 0.00 3.91
2025 4816 1.202290 CGTTTGCTGTTGGTTCTTGCT 60.202 47.619 0.00 0.00 0.00 3.91
2026 4817 1.199624 CGTTTGCTGTTGGTTCTTGC 58.800 50.000 0.00 0.00 0.00 4.01
2027 4818 1.535860 CCCGTTTGCTGTTGGTTCTTG 60.536 52.381 0.00 0.00 0.00 3.02
2028 4819 0.744281 CCCGTTTGCTGTTGGTTCTT 59.256 50.000 0.00 0.00 0.00 2.52
2029 4820 0.395173 ACCCGTTTGCTGTTGGTTCT 60.395 50.000 0.00 0.00 0.00 3.01
2030 4821 1.265905 CTACCCGTTTGCTGTTGGTTC 59.734 52.381 0.00 0.00 0.00 3.62
2031 4822 1.314730 CTACCCGTTTGCTGTTGGTT 58.685 50.000 0.00 0.00 0.00 3.67
2032 4823 1.170290 GCTACCCGTTTGCTGTTGGT 61.170 55.000 0.00 0.00 0.00 3.67
2033 4824 1.169661 TGCTACCCGTTTGCTGTTGG 61.170 55.000 0.00 0.00 0.00 3.77
2034 4825 0.238289 CTGCTACCCGTTTGCTGTTG 59.762 55.000 0.00 0.00 0.00 3.33
2035 4826 1.515521 GCTGCTACCCGTTTGCTGTT 61.516 55.000 0.00 0.00 0.00 3.16
2036 4827 1.966451 GCTGCTACCCGTTTGCTGT 60.966 57.895 0.00 0.00 0.00 4.40
2037 4828 1.514678 TTGCTGCTACCCGTTTGCTG 61.515 55.000 0.00 0.00 0.00 4.41
2038 4829 0.609131 ATTGCTGCTACCCGTTTGCT 60.609 50.000 0.00 0.00 0.00 3.91
2039 4830 0.243636 AATTGCTGCTACCCGTTTGC 59.756 50.000 0.00 0.00 0.00 3.68
2040 4831 2.159435 GGTAATTGCTGCTACCCGTTTG 60.159 50.000 0.00 0.00 32.83 2.93
2041 4832 2.089201 GGTAATTGCTGCTACCCGTTT 58.911 47.619 0.00 0.00 32.83 3.60
2042 4833 1.003812 TGGTAATTGCTGCTACCCGTT 59.996 47.619 12.41 0.00 37.38 4.44
2043 4834 0.616371 TGGTAATTGCTGCTACCCGT 59.384 50.000 12.41 0.00 37.38 5.28
2044 4835 1.745232 TTGGTAATTGCTGCTACCCG 58.255 50.000 12.41 0.00 37.38 5.28
2045 4836 2.823154 TGTTTGGTAATTGCTGCTACCC 59.177 45.455 12.41 2.67 37.38 3.69
2046 4837 4.718940 ATGTTTGGTAATTGCTGCTACC 57.281 40.909 9.06 9.06 38.47 3.18
2047 4838 7.812669 ACTTTTATGTTTGGTAATTGCTGCTAC 59.187 33.333 0.00 0.00 0.00 3.58
2048 4839 7.891561 ACTTTTATGTTTGGTAATTGCTGCTA 58.108 30.769 0.00 0.00 0.00 3.49
2049 4840 6.758254 ACTTTTATGTTTGGTAATTGCTGCT 58.242 32.000 0.00 0.00 0.00 4.24
2050 4841 7.812669 ACTACTTTTATGTTTGGTAATTGCTGC 59.187 33.333 0.00 0.00 0.00 5.25
2065 4856 9.810545 CCTTCCTTTCTCTCTACTACTTTTATG 57.189 37.037 0.00 0.00 0.00 1.90
2066 4857 8.983789 CCCTTCCTTTCTCTCTACTACTTTTAT 58.016 37.037 0.00 0.00 0.00 1.40
2067 4858 7.399478 CCCCTTCCTTTCTCTCTACTACTTTTA 59.601 40.741 0.00 0.00 0.00 1.52
2068 4859 6.213802 CCCCTTCCTTTCTCTCTACTACTTTT 59.786 42.308 0.00 0.00 0.00 2.27
2069 4860 5.722441 CCCCTTCCTTTCTCTCTACTACTTT 59.278 44.000 0.00 0.00 0.00 2.66
2070 4861 5.274015 CCCCTTCCTTTCTCTCTACTACTT 58.726 45.833 0.00 0.00 0.00 2.24
2071 4862 4.326291 CCCCCTTCCTTTCTCTCTACTACT 60.326 50.000 0.00 0.00 0.00 2.57
2072 4863 3.962063 CCCCCTTCCTTTCTCTCTACTAC 59.038 52.174 0.00 0.00 0.00 2.73
2073 4864 3.862923 TCCCCCTTCCTTTCTCTCTACTA 59.137 47.826 0.00 0.00 0.00 1.82
2074 4865 2.660556 TCCCCCTTCCTTTCTCTCTACT 59.339 50.000 0.00 0.00 0.00 2.57
2075 4866 3.035363 CTCCCCCTTCCTTTCTCTCTAC 58.965 54.545 0.00 0.00 0.00 2.59
2076 4867 2.022918 CCTCCCCCTTCCTTTCTCTCTA 60.023 54.545 0.00 0.00 0.00 2.43
2077 4868 1.274126 CCTCCCCCTTCCTTTCTCTCT 60.274 57.143 0.00 0.00 0.00 3.10
2078 4869 1.208706 CCTCCCCCTTCCTTTCTCTC 58.791 60.000 0.00 0.00 0.00 3.20
2079 4870 0.800239 TCCTCCCCCTTCCTTTCTCT 59.200 55.000 0.00 0.00 0.00 3.10
2080 4871 1.208706 CTCCTCCCCCTTCCTTTCTC 58.791 60.000 0.00 0.00 0.00 2.87
2081 4872 0.253394 CCTCCTCCCCCTTCCTTTCT 60.253 60.000 0.00 0.00 0.00 2.52
2082 4873 0.253207 TCCTCCTCCCCCTTCCTTTC 60.253 60.000 0.00 0.00 0.00 2.62
2083 4874 0.198696 TTCCTCCTCCCCCTTCCTTT 59.801 55.000 0.00 0.00 0.00 3.11
2084 4875 1.883889 TTCCTCCTCCCCCTTCCTT 59.116 57.895 0.00 0.00 0.00 3.36
2085 4876 3.648255 TTCCTCCTCCCCCTTCCT 58.352 61.111 0.00 0.00 0.00 3.36
2372 5163 2.166664 GTCTAGTAGTGCCAGTGAAGGG 59.833 54.545 0.00 0.00 0.00 3.95
2373 5164 2.166664 GGTCTAGTAGTGCCAGTGAAGG 59.833 54.545 0.00 0.00 0.00 3.46
2374 5165 3.093057 AGGTCTAGTAGTGCCAGTGAAG 58.907 50.000 13.31 0.00 0.00 3.02
2375 5166 3.170991 AGGTCTAGTAGTGCCAGTGAA 57.829 47.619 13.31 0.00 0.00 3.18
2376 5167 2.826128 CAAGGTCTAGTAGTGCCAGTGA 59.174 50.000 13.31 0.00 0.00 3.41
2377 5168 2.826128 TCAAGGTCTAGTAGTGCCAGTG 59.174 50.000 13.31 11.00 0.00 3.66
2378 5169 3.093057 CTCAAGGTCTAGTAGTGCCAGT 58.907 50.000 13.31 2.03 0.00 4.00
2379 5170 3.357203 TCTCAAGGTCTAGTAGTGCCAG 58.643 50.000 13.31 7.51 0.00 4.85
2380 5171 3.357203 CTCTCAAGGTCTAGTAGTGCCA 58.643 50.000 13.31 0.00 0.00 4.92
2381 5172 2.691011 CCTCTCAAGGTCTAGTAGTGCC 59.309 54.545 0.00 1.59 37.94 5.01
2394 5185 1.414181 ACGCCCATGATACCTCTCAAG 59.586 52.381 0.00 0.00 0.00 3.02
2395 5186 1.496060 ACGCCCATGATACCTCTCAA 58.504 50.000 0.00 0.00 0.00 3.02
2396 5187 2.375014 TACGCCCATGATACCTCTCA 57.625 50.000 0.00 0.00 0.00 3.27
2397 5188 2.826128 TGATACGCCCATGATACCTCTC 59.174 50.000 0.00 0.00 0.00 3.20
2398 5189 2.828520 CTGATACGCCCATGATACCTCT 59.171 50.000 0.00 0.00 0.00 3.69
2399 5190 2.093973 CCTGATACGCCCATGATACCTC 60.094 54.545 0.00 0.00 0.00 3.85
2400 5191 1.902508 CCTGATACGCCCATGATACCT 59.097 52.381 0.00 0.00 0.00 3.08
2401 5192 1.899814 TCCTGATACGCCCATGATACC 59.100 52.381 0.00 0.00 0.00 2.73
2402 5193 3.678056 TTCCTGATACGCCCATGATAC 57.322 47.619 0.00 0.00 0.00 2.24
2403 5194 3.901222 TCTTTCCTGATACGCCCATGATA 59.099 43.478 0.00 0.00 0.00 2.15
2404 5195 2.705658 TCTTTCCTGATACGCCCATGAT 59.294 45.455 0.00 0.00 0.00 2.45
2405 5196 2.115427 TCTTTCCTGATACGCCCATGA 58.885 47.619 0.00 0.00 0.00 3.07
2406 5197 2.620251 TCTTTCCTGATACGCCCATG 57.380 50.000 0.00 0.00 0.00 3.66
2407 5198 3.136443 TGATTCTTTCCTGATACGCCCAT 59.864 43.478 0.00 0.00 0.00 4.00
2408 5199 2.503765 TGATTCTTTCCTGATACGCCCA 59.496 45.455 0.00 0.00 0.00 5.36
2409 5200 3.134458 CTGATTCTTTCCTGATACGCCC 58.866 50.000 0.00 0.00 0.00 6.13
2410 5201 3.798202 ACTGATTCTTTCCTGATACGCC 58.202 45.455 0.00 0.00 0.00 5.68
2411 5202 5.343593 CGATACTGATTCTTTCCTGATACGC 59.656 44.000 0.00 0.00 0.00 4.42
2412 5203 5.859114 CCGATACTGATTCTTTCCTGATACG 59.141 44.000 0.00 0.00 0.00 3.06
2413 5204 6.982852 TCCGATACTGATTCTTTCCTGATAC 58.017 40.000 0.00 0.00 0.00 2.24
2414 5205 7.782897 ATCCGATACTGATTCTTTCCTGATA 57.217 36.000 0.00 0.00 0.00 2.15
2415 5206 6.678568 ATCCGATACTGATTCTTTCCTGAT 57.321 37.500 0.00 0.00 0.00 2.90
2416 5207 6.294010 CGTATCCGATACTGATTCTTTCCTGA 60.294 42.308 15.09 0.00 35.63 3.86
2417 5208 5.859114 CGTATCCGATACTGATTCTTTCCTG 59.141 44.000 15.09 0.00 35.63 3.86
2418 5209 5.535406 ACGTATCCGATACTGATTCTTTCCT 59.465 40.000 15.09 0.00 37.88 3.36
2419 5210 5.770417 ACGTATCCGATACTGATTCTTTCC 58.230 41.667 15.09 0.00 37.88 3.13
2420 5211 8.967552 ATAACGTATCCGATACTGATTCTTTC 57.032 34.615 15.09 0.00 37.88 2.62
2421 5212 8.027771 GGATAACGTATCCGATACTGATTCTTT 58.972 37.037 15.09 3.91 44.75 2.52
2422 5213 7.536855 GGATAACGTATCCGATACTGATTCTT 58.463 38.462 15.09 4.18 44.75 2.52
2423 5214 7.086230 GGATAACGTATCCGATACTGATTCT 57.914 40.000 15.09 2.25 44.75 2.40
2446 5237 1.864711 CAACCAGCGTATCCGTATTGG 59.135 52.381 0.00 0.00 37.83 3.16
2447 5238 1.260561 GCAACCAGCGTATCCGTATTG 59.739 52.381 0.00 0.00 36.15 1.90
2448 5239 1.578583 GCAACCAGCGTATCCGTATT 58.421 50.000 0.00 0.00 36.15 1.89
2449 5240 3.284197 GCAACCAGCGTATCCGTAT 57.716 52.632 0.00 0.00 36.15 3.06
2450 5241 4.819082 GCAACCAGCGTATCCGTA 57.181 55.556 0.00 0.00 36.15 4.02
2459 5250 1.009829 CGATACTTCCAGCAACCAGC 58.990 55.000 0.00 0.00 46.19 4.85
2460 5251 1.066143 ACCGATACTTCCAGCAACCAG 60.066 52.381 0.00 0.00 0.00 4.00
2461 5252 0.981183 ACCGATACTTCCAGCAACCA 59.019 50.000 0.00 0.00 0.00 3.67
2462 5253 1.066430 TCACCGATACTTCCAGCAACC 60.066 52.381 0.00 0.00 0.00 3.77
2463 5254 2.380084 TCACCGATACTTCCAGCAAC 57.620 50.000 0.00 0.00 0.00 4.17
2464 5255 3.627395 AATCACCGATACTTCCAGCAA 57.373 42.857 0.00 0.00 0.00 3.91
2465 5256 3.197766 AGAAATCACCGATACTTCCAGCA 59.802 43.478 0.00 0.00 0.00 4.41
2466 5257 3.798202 AGAAATCACCGATACTTCCAGC 58.202 45.455 0.00 0.00 0.00 4.85
2467 5258 4.034510 GCAAGAAATCACCGATACTTCCAG 59.965 45.833 0.00 0.00 0.00 3.86
2468 5259 3.938963 GCAAGAAATCACCGATACTTCCA 59.061 43.478 0.00 0.00 0.00 3.53
2469 5260 4.192317 AGCAAGAAATCACCGATACTTCC 58.808 43.478 0.00 0.00 0.00 3.46
2470 5261 6.903883 TTAGCAAGAAATCACCGATACTTC 57.096 37.500 0.00 0.00 0.00 3.01
2471 5262 7.681939 TTTTAGCAAGAAATCACCGATACTT 57.318 32.000 0.00 0.00 0.00 2.24
2472 5263 7.681939 TTTTTAGCAAGAAATCACCGATACT 57.318 32.000 0.00 0.00 0.00 2.12
2473 5264 8.911247 AATTTTTAGCAAGAAATCACCGATAC 57.089 30.769 0.00 0.00 0.00 2.24
2476 5267 9.567848 GATTAATTTTTAGCAAGAAATCACCGA 57.432 29.630 0.00 0.00 0.00 4.69
2477 5268 8.807581 GGATTAATTTTTAGCAAGAAATCACCG 58.192 33.333 0.00 0.00 0.00 4.94
2478 5269 9.651913 TGGATTAATTTTTAGCAAGAAATCACC 57.348 29.630 0.00 0.00 0.00 4.02
2484 5275 9.912634 CAAGTCTGGATTAATTTTTAGCAAGAA 57.087 29.630 0.00 0.00 0.00 2.52
2485 5276 8.522830 CCAAGTCTGGATTAATTTTTAGCAAGA 58.477 33.333 0.00 0.00 46.92 3.02
2486 5277 8.693542 CCAAGTCTGGATTAATTTTTAGCAAG 57.306 34.615 0.00 0.00 46.92 4.01
2503 5294 1.089920 CGAGGGCAAATCCAAGTCTG 58.910 55.000 0.00 0.00 36.21 3.51
2512 5303 4.040339 ACAAGGAAATTTTCGAGGGCAAAT 59.960 37.500 3.17 0.00 0.00 2.32
2517 5308 4.518970 TCAGAACAAGGAAATTTTCGAGGG 59.481 41.667 3.17 0.00 0.00 4.30
2522 5313 8.459635 GGGTATACTCAGAACAAGGAAATTTTC 58.540 37.037 2.25 0.24 0.00 2.29
2525 5316 6.424032 GGGGTATACTCAGAACAAGGAAATT 58.576 40.000 4.84 0.00 0.00 1.82
2534 5325 7.039293 ACAAAATTTTGGGGGTATACTCAGAAC 60.039 37.037 29.37 0.00 42.34 3.01
2541 5332 6.403049 CAGGAACAAAATTTTGGGGGTATAC 58.597 40.000 29.37 12.43 42.34 1.47
2547 5338 3.855255 ACCAGGAACAAAATTTTGGGG 57.145 42.857 29.37 22.99 42.34 4.96
2552 5343 7.614494 CATATCCAGAACCAGGAACAAAATTT 58.386 34.615 0.00 0.00 38.93 1.82
2555 5346 4.462483 GCATATCCAGAACCAGGAACAAAA 59.538 41.667 0.00 0.00 38.93 2.44
2556 5347 4.016444 GCATATCCAGAACCAGGAACAAA 58.984 43.478 0.00 0.00 38.93 2.83
2574 5365 3.559171 GGTCAACTGACAGAAAGGGCATA 60.559 47.826 10.08 0.00 46.47 3.14
2603 5394 9.906660 AAAGCTTCAATCTCTACTTATAGATCG 57.093 33.333 0.00 0.00 36.81 3.69
2647 5438 4.145052 ACAGGGGTCTTTCTGTCATTTTC 58.855 43.478 0.00 0.00 39.77 2.29
2661 5452 5.510430 AGAATTTCCTATTTGACAGGGGTC 58.490 41.667 0.00 0.00 44.57 4.46
2670 5461 9.874205 TTGCCTCATTAAAGAATTTCCTATTTG 57.126 29.630 0.00 0.00 40.09 2.32
2675 5466 9.223099 CAAAATTGCCTCATTAAAGAATTTCCT 57.777 29.630 0.00 0.00 40.09 3.36
2676 5467 9.002600 ACAAAATTGCCTCATTAAAGAATTTCC 57.997 29.630 0.00 0.00 40.09 3.13
2694 5513 3.795877 ACCAGTCCAGCAAACAAAATTG 58.204 40.909 0.00 0.00 0.00 2.32
2759 5578 9.953565 ACTAACAACAGCAAGTTCCTTATTATA 57.046 29.630 0.00 0.00 38.74 0.98
2811 5630 8.130307 ACAAACTTTGCATTTCTTGAACATAC 57.870 30.769 1.14 0.00 0.00 2.39
2813 5632 7.119553 ACAACAAACTTTGCATTTCTTGAACAT 59.880 29.630 6.35 0.00 0.00 2.71
2833 5652 7.667557 AGCTGTAAACTACTAGATCACAACAA 58.332 34.615 0.00 0.00 0.00 2.83
2843 5662 6.929606 ACAAGACCAAAGCTGTAAACTACTAG 59.070 38.462 0.00 0.00 0.00 2.57
2848 5667 3.066760 GCACAAGACCAAAGCTGTAAACT 59.933 43.478 0.00 0.00 0.00 2.66
2849 5668 3.372060 GCACAAGACCAAAGCTGTAAAC 58.628 45.455 0.00 0.00 0.00 2.01
2850 5669 2.360801 GGCACAAGACCAAAGCTGTAAA 59.639 45.455 0.00 0.00 0.00 2.01
2851 5670 1.953686 GGCACAAGACCAAAGCTGTAA 59.046 47.619 0.00 0.00 0.00 2.41
2852 5671 1.142870 AGGCACAAGACCAAAGCTGTA 59.857 47.619 0.00 0.00 0.00 2.74
2853 5672 0.106519 AGGCACAAGACCAAAGCTGT 60.107 50.000 0.00 0.00 0.00 4.40
2854 5673 0.595095 GAGGCACAAGACCAAAGCTG 59.405 55.000 0.00 0.00 0.00 4.24
2855 5674 0.475906 AGAGGCACAAGACCAAAGCT 59.524 50.000 0.00 0.00 0.00 3.74
2860 5679 1.419381 TGTACAGAGGCACAAGACCA 58.581 50.000 0.00 0.00 0.00 4.02
2873 5692 4.690748 CCAAGAACCTACACACATGTACAG 59.309 45.833 0.00 0.00 40.48 2.74
2894 5713 1.073603 TGTGATGTTGGCTCATGTCCA 59.926 47.619 5.54 5.54 0.00 4.02
2918 5737 2.030274 AGGTAAAAATTGTGTGCCGCTC 60.030 45.455 0.00 0.00 0.00 5.03
2939 5758 5.472137 GGATGCTACAGTAGAAAACCAACAA 59.528 40.000 12.15 0.00 0.00 2.83
2940 5759 5.001232 GGATGCTACAGTAGAAAACCAACA 58.999 41.667 12.15 0.00 0.00 3.33
3058 5885 4.503817 CCTGTCAAAACTGGAGACATCAGA 60.504 45.833 0.00 0.00 44.97 3.27
3066 5900 3.070159 TCTGAGACCTGTCAAAACTGGAG 59.930 47.826 8.27 0.00 44.97 3.86
3112 5946 1.937191 TAGTGCATCAGAGTGTCCCA 58.063 50.000 0.00 0.00 0.00 4.37
3151 5985 1.436983 GAATGCCGCGACTTTAGGGG 61.437 60.000 8.23 0.00 43.62 4.79
3189 6023 4.019321 TGGACTGCTTCTAGGTTTAGCAAT 60.019 41.667 0.00 0.00 43.64 3.56
3190 6024 3.326588 TGGACTGCTTCTAGGTTTAGCAA 59.673 43.478 0.00 0.00 43.64 3.91
3191 6025 2.903784 TGGACTGCTTCTAGGTTTAGCA 59.096 45.455 0.00 0.00 42.22 3.49
3236 6070 6.246163 TCCTGTTAATATCTCTGATCGCCTA 58.754 40.000 0.00 0.00 0.00 3.93
3380 6214 3.004171 GGTAATGTCGTGGTGCACATAA 58.996 45.455 20.43 0.00 32.74 1.90
3627 6463 6.088616 GCATAGACAAAAACAAGATGAGCAAC 59.911 38.462 0.00 0.00 0.00 4.17
3815 6651 5.532032 TGAGAATTCACACTTCTTTCATGCA 59.468 36.000 8.44 0.00 33.18 3.96
3816 6652 6.005583 TGAGAATTCACACTTCTTTCATGC 57.994 37.500 8.44 0.00 33.18 4.06
3821 6657 9.160496 GAGTATGATGAGAATTCACACTTCTTT 57.840 33.333 7.78 0.00 35.83 2.52
3865 6701 2.430546 TTGCAAAAATACCAGTGCCG 57.569 45.000 0.00 0.00 36.12 5.69
3938 6775 0.537188 ACCGTCACCAGATCCACATC 59.463 55.000 0.00 0.00 0.00 3.06
3954 6791 1.068333 CCAGCAATTCCACAGAAACCG 60.068 52.381 0.00 0.00 35.09 4.44
3982 6819 3.890527 CAGAGGGGTGGATTTCTGG 57.109 57.895 0.00 0.00 34.76 3.86
3999 6836 0.599991 CGTACTGAGCACAGCAACCA 60.600 55.000 11.37 0.00 46.95 3.67
4000 6837 1.291877 CCGTACTGAGCACAGCAACC 61.292 60.000 11.37 0.00 46.95 3.77
4009 6846 2.165845 AGTAACCATCACCGTACTGAGC 59.834 50.000 0.00 0.00 0.00 4.26
4118 8053 4.445385 GCAAAGCAAAATACACCACTTCTG 59.555 41.667 0.00 0.00 0.00 3.02
4180 8115 3.868661 GGCCAAAACACACAAGGTTTTAG 59.131 43.478 0.00 0.00 44.24 1.85
4186 8121 1.591327 GCGGCCAAAACACACAAGG 60.591 57.895 2.24 0.00 0.00 3.61
4213 8148 3.713288 TGCAAGATCTACCGGTAATTCG 58.287 45.455 16.65 3.86 0.00 3.34
4219 8154 0.456221 CGACTGCAAGATCTACCGGT 59.544 55.000 13.98 13.98 37.43 5.28
4456 8395 1.895131 ACAGGGAAGATGCGCAAAATT 59.105 42.857 17.11 9.79 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.