Multiple sequence alignment - TraesCS1D01G232600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G232600 chr1D 100.000 6812 0 0 1001 7812 321257852 321264663 0.000000e+00 12580.0
1 TraesCS1D01G232600 chr1D 100.000 452 0 0 1 452 321256852 321257303 0.000000e+00 835.0
2 TraesCS1D01G232600 chr1D 98.742 159 2 0 2953 3111 321259648 321259806 4.610000e-72 283.0
3 TraesCS1D01G232600 chr1D 98.742 159 2 0 2797 2955 321259804 321259962 4.610000e-72 283.0
4 TraesCS1D01G232600 chr1D 96.875 32 0 1 1939 1969 367412858 367412889 1.400000e-02 52.8
5 TraesCS1D01G232600 chr1B 95.028 3801 119 22 3133 6915 434085999 434089747 0.000000e+00 5908.0
6 TraesCS1D01G232600 chr1B 94.413 1951 73 11 1001 2924 434084057 434085998 0.000000e+00 2966.0
7 TraesCS1D01G232600 chr1B 85.120 457 24 17 1 452 434083226 434083643 2.010000e-115 427.0
8 TraesCS1D01G232600 chr1B 85.252 278 29 9 7416 7688 434090310 434090580 7.720000e-70 276.0
9 TraesCS1D01G232600 chr1B 90.110 182 13 3 7126 7304 434090119 434090298 1.700000e-56 231.0
10 TraesCS1D01G232600 chr1B 93.750 128 8 0 2953 3080 434085871 434085998 8.000000e-45 193.0
11 TraesCS1D01G232600 chr1B 96.491 114 3 1 7302 7414 386204592 386204479 3.720000e-43 187.0
12 TraesCS1D01G232600 chr1A 96.680 2229 49 5 3534 5760 401773539 401771334 0.000000e+00 3683.0
13 TraesCS1D01G232600 chr1A 94.106 1985 79 19 1001 2955 401776057 401774081 0.000000e+00 2983.0
14 TraesCS1D01G232600 chr1A 94.525 968 31 8 5914 6863 401771334 401770371 0.000000e+00 1474.0
15 TraesCS1D01G232600 chr1A 92.517 588 31 4 2953 3537 401774238 401773661 0.000000e+00 830.0
16 TraesCS1D01G232600 chr1A 87.281 456 29 10 1 452 401777056 401776626 1.960000e-135 494.0
17 TraesCS1D01G232600 chr1A 94.413 179 7 1 7125 7300 401770035 401769857 9.990000e-69 272.0
18 TraesCS1D01G232600 chr1A 83.673 294 31 9 7531 7812 401769613 401769325 2.160000e-65 261.0
19 TraesCS1D01G232600 chr1A 92.188 128 7 3 7282 7407 6706982 6706856 2.240000e-40 178.0
20 TraesCS1D01G232600 chr6D 95.763 118 3 2 7293 7409 238958054 238958170 1.030000e-43 189.0
21 TraesCS1D01G232600 chr6D 94.872 117 5 1 7296 7411 67156422 67156538 1.730000e-41 182.0
22 TraesCS1D01G232600 chr2A 95.652 115 4 1 7299 7412 179352283 179352169 4.810000e-42 183.0
23 TraesCS1D01G232600 chr2A 84.706 85 8 4 6014 6094 586454853 586454936 6.500000e-11 80.5
24 TraesCS1D01G232600 chr5B 94.215 121 4 3 7290 7407 558558576 558558696 1.730000e-41 182.0
25 TraesCS1D01G232600 chr5B 87.013 77 10 0 6022 6098 433529329 433529405 3.880000e-13 87.9
26 TraesCS1D01G232600 chr6B 92.188 128 9 1 7296 7422 214085161 214085034 6.230000e-41 180.0
27 TraesCS1D01G232600 chr6B 79.739 153 25 5 7659 7807 148918733 148918583 1.070000e-18 106.0
28 TraesCS1D01G232600 chr6B 88.312 77 6 3 5946 6019 47264055 47264131 1.080000e-13 89.8
29 TraesCS1D01G232600 chr6B 94.737 38 2 0 6022 6059 484530936 484530899 8.470000e-05 60.2
30 TraesCS1D01G232600 chr2D 94.118 119 5 2 7291 7408 65564836 65564719 6.230000e-41 180.0
31 TraesCS1D01G232600 chr2D 100.000 28 0 0 1942 1969 420523901 420523928 1.400000e-02 52.8
32 TraesCS1D01G232600 chr5D 94.783 115 4 2 7302 7415 463187905 463187792 2.240000e-40 178.0
33 TraesCS1D01G232600 chr4A 78.534 191 32 8 7619 7805 164398474 164398659 4.950000e-22 117.0
34 TraesCS1D01G232600 chr4A 86.842 76 7 3 5946 6018 266953899 266953974 1.810000e-11 82.4
35 TraesCS1D01G232600 chr4A 82.432 74 11 2 5946 6017 467527363 467527290 6.540000e-06 63.9
36 TraesCS1D01G232600 chr4A 100.000 28 0 0 1941 1968 617484984 617484957 1.400000e-02 52.8
37 TraesCS1D01G232600 chr4B 84.545 110 13 3 7604 7710 388826626 388826734 1.070000e-18 106.0
38 TraesCS1D01G232600 chr4B 84.615 78 9 3 5946 6020 247563512 247563435 3.020000e-09 75.0
39 TraesCS1D01G232600 chr4B 83.562 73 11 1 5946 6017 167932496 167932424 5.060000e-07 67.6
40 TraesCS1D01G232600 chr4B 100.000 28 0 0 1975 2002 306579964 306579937 1.400000e-02 52.8
41 TraesCS1D01G232600 chr3D 94.737 57 3 0 1693 1749 508170986 508171042 1.080000e-13 89.8
42 TraesCS1D01G232600 chr5A 93.878 49 2 1 6024 6071 662436115 662436067 1.090000e-08 73.1
43 TraesCS1D01G232600 chr4D 83.562 73 11 1 5946 6017 108862950 108863022 5.060000e-07 67.6
44 TraesCS1D01G232600 chr6A 94.737 38 1 1 6022 6059 475434466 475434502 3.040000e-04 58.4
45 TraesCS1D01G232600 chr3B 96.875 32 1 0 6021 6052 302357069 302357038 4.000000e-03 54.7
46 TraesCS1D01G232600 chr7B 100.000 28 0 0 1941 1968 484589762 484589735 1.400000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G232600 chr1D 321256852 321264663 7811 False 6707.500000 12580 100.000000 1 7812 2 chr1D.!!$F2 7811
1 TraesCS1D01G232600 chr1B 434083226 434090580 7354 False 1666.833333 5908 90.612167 1 7688 6 chr1B.!!$F1 7687
2 TraesCS1D01G232600 chr1A 401769325 401777056 7731 True 1428.142857 3683 91.885000 1 7812 7 chr1A.!!$R2 7811

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
408 416 0.170561 ACGATCGTTGTTAGCGAGCT 59.829 50.000 16.60 2.25 41.80 4.09 F
411 419 0.525668 ATCGTTGTTAGCGAGCTCCG 60.526 55.000 8.47 4.62 41.83 4.63 F
1586 1672 0.659957 GGCGGTGAATCAAGAGATGC 59.340 55.000 0.00 0.00 33.90 3.91 F
1670 1756 1.332195 CGCCTCATCCCATACTCTGA 58.668 55.000 0.00 0.00 0.00 3.27 F
2958 3061 1.550072 CCTTGCGGAATCAATTTGGGT 59.450 47.619 0.00 0.00 0.00 4.51 F
3708 3942 0.107017 CACCCTCCACAAGCTATGGG 60.107 60.000 15.25 9.73 37.85 4.00 F
3719 3953 0.107017 AGCTATGGGTCCATGCACAC 60.107 55.000 12.42 0.00 37.82 3.82 F
3720 3954 0.394216 GCTATGGGTCCATGCACACA 60.394 55.000 12.42 0.00 37.82 3.72 F
3721 3955 1.671979 CTATGGGTCCATGCACACAG 58.328 55.000 12.42 0.00 37.82 3.66 F
3722 3956 0.394216 TATGGGTCCATGCACACAGC 60.394 55.000 12.42 0.00 45.96 4.40 F
3936 4170 2.222027 GCTGCAAAACTAGTCAGGTGT 58.778 47.619 10.38 0.00 0.00 4.16 F
4097 4331 3.423539 TGCTGGCTCTAGTTTGTGATT 57.576 42.857 0.00 0.00 0.00 2.57 F
6008 6245 2.223971 CGACACGCTATATTGGAACCCT 60.224 50.000 0.00 0.00 0.00 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1466 1545 0.388907 TACAACTACCTGCGTTCGCC 60.389 55.000 14.44 0.00 0.00 5.54 R
1861 1958 1.522258 CAAACGGTGCTGCACAAAATC 59.478 47.619 31.35 14.46 35.86 2.17 R
2970 3073 0.747852 GCGGAAAAACAAGGTTGGGA 59.252 50.000 0.00 0.00 0.00 4.37 R
2971 3074 0.750249 AGCGGAAAAACAAGGTTGGG 59.250 50.000 0.00 0.00 0.00 4.12 R
3911 4145 1.168714 GACTAGTTTTGCAGCCTGGG 58.831 55.000 0.00 0.00 0.00 4.45 R
4783 5019 4.139038 GCCAGTGTTACCTAAGTTTCCAA 58.861 43.478 0.00 0.00 0.00 3.53 R
5412 5648 4.340381 AGGTGATATTTCAGGCATTTCAGC 59.660 41.667 0.00 0.00 33.06 4.26 R
5787 6023 4.759693 CACTAACTTGGATTGTTAGCCACA 59.240 41.667 11.95 0.00 46.28 4.17 R
5803 6039 7.038231 AGCCTTTACCTACTTGATTCACTAACT 60.038 37.037 0.00 0.00 0.00 2.24 R
5814 6050 7.865706 ATCATTGTTAGCCTTTACCTACTTG 57.134 36.000 0.00 0.00 0.00 3.16 R
6008 6245 2.093711 CCATAAGATCGACACCACACCA 60.094 50.000 0.00 0.00 0.00 4.17 R
6089 6330 2.738587 ACACCACCACCACAACAATA 57.261 45.000 0.00 0.00 0.00 1.90 R
7393 7909 0.388134 CACACGTACTCCCCTGTTCG 60.388 60.000 0.00 0.00 36.91 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 1.393883 GCCGAAGAAGCTCTAAAACCG 59.606 52.381 0.00 0.00 0.00 4.44
58 59 1.393883 CCGAAGAAGCTCTAAAACCGC 59.606 52.381 0.00 0.00 0.00 5.68
145 149 1.336517 CCTTCGGAGCGAGTGTGTTTA 60.337 52.381 0.00 0.00 37.14 2.01
148 152 1.338973 TCGGAGCGAGTGTGTTTAAGT 59.661 47.619 0.00 0.00 0.00 2.24
149 153 2.132762 CGGAGCGAGTGTGTTTAAGTT 58.867 47.619 0.00 0.00 0.00 2.66
150 154 3.004629 TCGGAGCGAGTGTGTTTAAGTTA 59.995 43.478 0.00 0.00 0.00 2.24
151 155 3.364023 CGGAGCGAGTGTGTTTAAGTTAG 59.636 47.826 0.00 0.00 0.00 2.34
152 156 3.678548 GGAGCGAGTGTGTTTAAGTTAGG 59.321 47.826 0.00 0.00 0.00 2.69
153 157 3.660865 AGCGAGTGTGTTTAAGTTAGGG 58.339 45.455 0.00 0.00 0.00 3.53
154 158 2.740447 GCGAGTGTGTTTAAGTTAGGGG 59.260 50.000 0.00 0.00 0.00 4.79
155 159 3.555586 GCGAGTGTGTTTAAGTTAGGGGA 60.556 47.826 0.00 0.00 0.00 4.81
156 160 4.634199 CGAGTGTGTTTAAGTTAGGGGAA 58.366 43.478 0.00 0.00 0.00 3.97
157 161 4.450080 CGAGTGTGTTTAAGTTAGGGGAAC 59.550 45.833 0.00 0.00 38.44 3.62
276 283 9.589461 AACTATTTCTCCTATAATCTCCTTCGA 57.411 33.333 0.00 0.00 0.00 3.71
328 336 2.892784 AACTAGCATAGGCGAACTCC 57.107 50.000 0.00 0.00 44.97 3.85
384 392 2.752238 CGGTGAGCTCCCTCGAGT 60.752 66.667 12.15 0.00 41.13 4.18
404 412 0.521867 TCCGACGATCGTTGTTAGCG 60.522 55.000 28.95 22.11 38.40 4.26
405 413 0.521867 CCGACGATCGTTGTTAGCGA 60.522 55.000 28.95 0.00 42.75 4.93
406 414 0.832030 CGACGATCGTTGTTAGCGAG 59.168 55.000 23.63 2.22 41.83 5.03
407 415 0.566593 GACGATCGTTGTTAGCGAGC 59.433 55.000 23.63 1.00 41.83 5.03
408 416 0.170561 ACGATCGTTGTTAGCGAGCT 59.829 50.000 16.60 2.25 41.80 4.09
409 417 0.840729 CGATCGTTGTTAGCGAGCTC 59.159 55.000 7.03 2.73 41.80 4.09
410 418 1.201343 GATCGTTGTTAGCGAGCTCC 58.799 55.000 8.47 0.68 40.93 4.70
411 419 0.525668 ATCGTTGTTAGCGAGCTCCG 60.526 55.000 8.47 4.62 41.83 4.63
412 420 2.158959 CGTTGTTAGCGAGCTCCGG 61.159 63.158 8.47 0.00 39.04 5.14
1395 1474 2.166459 TGACGTCTATCTTTCTGGCCAG 59.834 50.000 27.87 27.87 0.00 4.85
1426 1505 2.230508 TCGGTTAGTTCTGCGAGTTGAT 59.769 45.455 0.00 0.00 0.00 2.57
1479 1560 4.124351 CCTCGGCGAACGCAGGTA 62.124 66.667 20.16 1.51 44.11 3.08
1480 1561 2.579787 CTCGGCGAACGCAGGTAG 60.580 66.667 20.16 7.46 44.11 3.18
1481 1562 3.338126 CTCGGCGAACGCAGGTAGT 62.338 63.158 20.16 0.00 44.11 2.73
1482 1563 2.431942 CGGCGAACGCAGGTAGTT 60.432 61.111 20.16 0.00 44.11 2.24
1586 1672 0.659957 GGCGGTGAATCAAGAGATGC 59.340 55.000 0.00 0.00 33.90 3.91
1600 1686 7.008440 TCAAGAGATGCGAGAAATACAAATG 57.992 36.000 0.00 0.00 0.00 2.32
1654 1740 1.797025 AGACTACTTTCTTGTGCGCC 58.203 50.000 4.18 0.00 0.00 6.53
1670 1756 1.332195 CGCCTCATCCCATACTCTGA 58.668 55.000 0.00 0.00 0.00 3.27
1772 1858 6.982852 TCCTCTTCAAGTGTAGTAGAAACTG 58.017 40.000 0.00 0.00 36.36 3.16
1786 1872 3.335579 AGAAACTGCCGGTATCAAGAAC 58.664 45.455 1.90 0.00 0.00 3.01
2127 2224 8.579682 TCAGTTGACATACAGATAATTGATCG 57.420 34.615 0.00 0.00 39.80 3.69
2353 2450 4.522114 TGAACATTTTCAGGTGTCTCACA 58.478 39.130 2.41 0.00 36.79 3.58
2437 2535 8.970691 ATGCACTTTGTTCTAAATGTTATCAC 57.029 30.769 0.00 0.00 0.00 3.06
2438 2536 7.935520 TGCACTTTGTTCTAAATGTTATCACA 58.064 30.769 0.00 0.00 37.31 3.58
2509 2612 5.306394 ACAGAGGCTAAAGTCAACCTTAAC 58.694 41.667 0.00 0.00 31.48 2.01
2617 2720 2.511600 GAAGACCCCGATGCCACG 60.512 66.667 0.00 0.00 0.00 4.94
2650 2753 1.913419 TCCTTTGGGGACACACTATCC 59.087 52.381 0.00 0.00 42.67 2.59
2758 2861 1.676635 TGCACTCTTGGATGCAGCC 60.677 57.895 15.83 15.83 46.63 4.85
2831 2934 2.394632 ACCTCCCAACCTTGTTTTTCC 58.605 47.619 0.00 0.00 0.00 3.13
2877 2980 6.712095 TCATGTTTTCAGTAGTTGCTCATCTT 59.288 34.615 0.00 0.00 0.00 2.40
2924 3027 9.569167 GAAAATTATGGTAGAAGCAAAGTTACC 57.431 33.333 0.00 0.00 36.84 2.85
2925 3028 7.640597 AATTATGGTAGAAGCAAAGTTACCC 57.359 36.000 0.00 0.00 35.72 3.69
2926 3029 4.929146 ATGGTAGAAGCAAAGTTACCCT 57.071 40.909 0.00 0.00 35.72 4.34
2927 3030 4.717279 TGGTAGAAGCAAAGTTACCCTT 57.283 40.909 0.00 0.00 35.72 3.95
2928 3031 5.829062 TGGTAGAAGCAAAGTTACCCTTA 57.171 39.130 0.00 0.00 35.72 2.69
2929 3032 6.382919 TGGTAGAAGCAAAGTTACCCTTAT 57.617 37.500 0.00 0.00 35.72 1.73
2930 3033 7.499200 TGGTAGAAGCAAAGTTACCCTTATA 57.501 36.000 0.00 0.00 35.72 0.98
2931 3034 7.920227 TGGTAGAAGCAAAGTTACCCTTATAA 58.080 34.615 0.00 0.00 35.72 0.98
2932 3035 7.825761 TGGTAGAAGCAAAGTTACCCTTATAAC 59.174 37.037 0.00 0.00 35.72 1.89
2933 3036 7.825761 GGTAGAAGCAAAGTTACCCTTATAACA 59.174 37.037 0.00 0.00 37.49 2.41
2934 3037 9.392259 GTAGAAGCAAAGTTACCCTTATAACAT 57.608 33.333 0.00 0.00 37.49 2.71
2935 3038 8.879427 AGAAGCAAAGTTACCCTTATAACATT 57.121 30.769 0.00 0.00 37.49 2.71
2936 3039 9.309224 AGAAGCAAAGTTACCCTTATAACATTT 57.691 29.630 0.00 0.00 37.49 2.32
2937 3040 9.923143 GAAGCAAAGTTACCCTTATAACATTTT 57.077 29.630 0.00 0.00 37.49 1.82
2938 3041 9.923143 AAGCAAAGTTACCCTTATAACATTTTC 57.077 29.630 0.00 0.00 37.49 2.29
2939 3042 8.528643 AGCAAAGTTACCCTTATAACATTTTCC 58.471 33.333 0.00 0.00 37.49 3.13
2940 3043 8.528643 GCAAAGTTACCCTTATAACATTTTCCT 58.471 33.333 0.00 0.00 37.49 3.36
2943 3046 8.063200 AGTTACCCTTATAACATTTTCCTTGC 57.937 34.615 0.00 0.00 37.49 4.01
2944 3047 5.576447 ACCCTTATAACATTTTCCTTGCG 57.424 39.130 0.00 0.00 0.00 4.85
2945 3048 4.401202 ACCCTTATAACATTTTCCTTGCGG 59.599 41.667 0.00 0.00 0.00 5.69
2946 3049 4.642885 CCCTTATAACATTTTCCTTGCGGA 59.357 41.667 0.00 0.00 37.60 5.54
2956 3059 3.591196 TTCCTTGCGGAATCAATTTGG 57.409 42.857 0.00 0.00 44.28 3.28
2957 3060 1.824230 TCCTTGCGGAATCAATTTGGG 59.176 47.619 0.00 0.00 36.03 4.12
2958 3061 1.550072 CCTTGCGGAATCAATTTGGGT 59.450 47.619 0.00 0.00 0.00 4.51
2959 3062 2.757868 CCTTGCGGAATCAATTTGGGTA 59.242 45.455 0.00 0.00 0.00 3.69
2960 3063 3.194542 CCTTGCGGAATCAATTTGGGTAA 59.805 43.478 0.00 0.00 0.00 2.85
2961 3064 3.859411 TGCGGAATCAATTTGGGTAAC 57.141 42.857 0.00 0.00 0.00 2.50
2962 3065 3.426615 TGCGGAATCAATTTGGGTAACT 58.573 40.909 0.00 0.00 0.00 2.24
2963 3066 3.192422 TGCGGAATCAATTTGGGTAACTG 59.808 43.478 0.00 0.00 0.00 3.16
2964 3067 3.442273 GCGGAATCAATTTGGGTAACTGA 59.558 43.478 0.00 0.00 0.00 3.41
2965 3068 4.097892 GCGGAATCAATTTGGGTAACTGAT 59.902 41.667 0.00 0.00 0.00 2.90
2966 3069 5.394115 GCGGAATCAATTTGGGTAACTGATT 60.394 40.000 0.00 0.00 0.00 2.57
2967 3070 6.183360 GCGGAATCAATTTGGGTAACTGATTA 60.183 38.462 0.00 0.00 0.00 1.75
2968 3071 7.193595 CGGAATCAATTTGGGTAACTGATTAC 58.806 38.462 0.00 0.00 40.12 1.89
2978 3081 4.838904 GTAACTGATTACCTCCCAACCT 57.161 45.455 0.00 0.00 35.56 3.50
2979 3082 5.175388 GTAACTGATTACCTCCCAACCTT 57.825 43.478 0.00 0.00 35.56 3.50
2980 3083 3.721087 ACTGATTACCTCCCAACCTTG 57.279 47.619 0.00 0.00 0.00 3.61
2981 3084 2.986728 ACTGATTACCTCCCAACCTTGT 59.013 45.455 0.00 0.00 0.00 3.16
2982 3085 3.397955 ACTGATTACCTCCCAACCTTGTT 59.602 43.478 0.00 0.00 0.00 2.83
2983 3086 4.141018 ACTGATTACCTCCCAACCTTGTTT 60.141 41.667 0.00 0.00 0.00 2.83
2984 3087 4.810345 TGATTACCTCCCAACCTTGTTTT 58.190 39.130 0.00 0.00 0.00 2.43
2985 3088 5.212745 TGATTACCTCCCAACCTTGTTTTT 58.787 37.500 0.00 0.00 0.00 1.94
2986 3089 5.303333 TGATTACCTCCCAACCTTGTTTTTC 59.697 40.000 0.00 0.00 0.00 2.29
2987 3090 2.394632 ACCTCCCAACCTTGTTTTTCC 58.605 47.619 0.00 0.00 0.00 3.13
2988 3091 1.339929 CCTCCCAACCTTGTTTTTCCG 59.660 52.381 0.00 0.00 0.00 4.30
2989 3092 0.747852 TCCCAACCTTGTTTTTCCGC 59.252 50.000 0.00 0.00 0.00 5.54
2990 3093 0.750249 CCCAACCTTGTTTTTCCGCT 59.250 50.000 0.00 0.00 0.00 5.52
2991 3094 1.138069 CCCAACCTTGTTTTTCCGCTT 59.862 47.619 0.00 0.00 0.00 4.68
2992 3095 2.419436 CCCAACCTTGTTTTTCCGCTTT 60.419 45.455 0.00 0.00 0.00 3.51
2993 3096 3.181474 CCCAACCTTGTTTTTCCGCTTTA 60.181 43.478 0.00 0.00 0.00 1.85
2994 3097 4.434520 CCAACCTTGTTTTTCCGCTTTAA 58.565 39.130 0.00 0.00 0.00 1.52
2995 3098 5.053811 CCAACCTTGTTTTTCCGCTTTAAT 58.946 37.500 0.00 0.00 0.00 1.40
2996 3099 6.217294 CCAACCTTGTTTTTCCGCTTTAATA 58.783 36.000 0.00 0.00 0.00 0.98
2997 3100 6.871492 CCAACCTTGTTTTTCCGCTTTAATAT 59.129 34.615 0.00 0.00 0.00 1.28
2998 3101 8.030106 CCAACCTTGTTTTTCCGCTTTAATATA 58.970 33.333 0.00 0.00 0.00 0.86
2999 3102 9.413048 CAACCTTGTTTTTCCGCTTTAATATAA 57.587 29.630 0.00 0.00 0.00 0.98
3000 3103 9.984190 AACCTTGTTTTTCCGCTTTAATATAAA 57.016 25.926 0.00 0.00 0.00 1.40
3025 3128 9.467258 AATGTCAAATCATGTTTTCAGTAGTTG 57.533 29.630 0.00 0.00 0.00 3.16
3026 3129 6.917477 TGTCAAATCATGTTTTCAGTAGTTGC 59.083 34.615 0.00 0.00 0.00 4.17
3027 3130 7.141363 GTCAAATCATGTTTTCAGTAGTTGCT 58.859 34.615 0.00 0.00 0.00 3.91
3028 3131 7.324616 GTCAAATCATGTTTTCAGTAGTTGCTC 59.675 37.037 0.00 0.00 0.00 4.26
3029 3132 6.882610 AATCATGTTTTCAGTAGTTGCTCA 57.117 33.333 0.00 0.00 0.00 4.26
3030 3133 7.458409 AATCATGTTTTCAGTAGTTGCTCAT 57.542 32.000 0.00 0.00 0.00 2.90
3031 3134 6.486253 TCATGTTTTCAGTAGTTGCTCATC 57.514 37.500 0.00 0.00 0.00 2.92
3032 3135 6.233434 TCATGTTTTCAGTAGTTGCTCATCT 58.767 36.000 0.00 0.00 0.00 2.90
3033 3136 6.712095 TCATGTTTTCAGTAGTTGCTCATCTT 59.288 34.615 0.00 0.00 0.00 2.40
3034 3137 6.304356 TGTTTTCAGTAGTTGCTCATCTTG 57.696 37.500 0.00 0.00 0.00 3.02
3035 3138 5.822519 TGTTTTCAGTAGTTGCTCATCTTGT 59.177 36.000 0.00 0.00 0.00 3.16
3036 3139 5.929697 TTTCAGTAGTTGCTCATCTTGTG 57.070 39.130 0.00 0.00 0.00 3.33
3037 3140 4.871933 TCAGTAGTTGCTCATCTTGTGA 57.128 40.909 0.00 0.00 35.05 3.58
3038 3141 4.560128 TCAGTAGTTGCTCATCTTGTGAC 58.440 43.478 0.00 0.00 32.22 3.67
3039 3142 4.039124 TCAGTAGTTGCTCATCTTGTGACA 59.961 41.667 0.00 0.00 32.22 3.58
3040 3143 4.388165 CAGTAGTTGCTCATCTTGTGACAG 59.612 45.833 0.00 0.00 32.22 3.51
3041 3144 3.758755 AGTTGCTCATCTTGTGACAGA 57.241 42.857 0.00 0.00 32.22 3.41
3042 3145 3.397482 AGTTGCTCATCTTGTGACAGAC 58.603 45.455 0.00 0.00 32.22 3.51
3043 3146 3.070734 AGTTGCTCATCTTGTGACAGACT 59.929 43.478 0.00 0.00 32.22 3.24
3044 3147 3.309961 TGCTCATCTTGTGACAGACTC 57.690 47.619 0.00 0.00 32.22 3.36
3045 3148 2.257894 GCTCATCTTGTGACAGACTCG 58.742 52.381 0.00 0.00 32.22 4.18
3046 3149 2.095008 GCTCATCTTGTGACAGACTCGA 60.095 50.000 0.00 0.00 32.22 4.04
3047 3150 3.612717 GCTCATCTTGTGACAGACTCGAA 60.613 47.826 0.00 0.00 32.22 3.71
3048 3151 3.902150 TCATCTTGTGACAGACTCGAAC 58.098 45.455 0.00 0.00 0.00 3.95
3049 3152 3.317993 TCATCTTGTGACAGACTCGAACA 59.682 43.478 0.00 0.00 0.00 3.18
3050 3153 3.355626 TCTTGTGACAGACTCGAACAG 57.644 47.619 0.00 0.00 0.00 3.16
3051 3154 2.949644 TCTTGTGACAGACTCGAACAGA 59.050 45.455 0.00 0.00 0.00 3.41
3052 3155 3.380320 TCTTGTGACAGACTCGAACAGAA 59.620 43.478 0.00 0.00 0.00 3.02
3053 3156 4.038042 TCTTGTGACAGACTCGAACAGAAT 59.962 41.667 0.00 0.00 0.00 2.40
3054 3157 3.642705 TGTGACAGACTCGAACAGAATG 58.357 45.455 0.00 0.00 46.00 2.67
3055 3158 3.317993 TGTGACAGACTCGAACAGAATGA 59.682 43.478 0.00 0.00 39.69 2.57
3056 3159 4.202111 TGTGACAGACTCGAACAGAATGAA 60.202 41.667 0.00 0.00 39.69 2.57
3057 3160 4.745125 GTGACAGACTCGAACAGAATGAAA 59.255 41.667 0.00 0.00 39.69 2.69
3058 3161 5.234329 GTGACAGACTCGAACAGAATGAAAA 59.766 40.000 0.00 0.00 39.69 2.29
3059 3162 5.991606 TGACAGACTCGAACAGAATGAAAAT 59.008 36.000 0.00 0.00 39.69 1.82
3060 3163 6.483307 TGACAGACTCGAACAGAATGAAAATT 59.517 34.615 0.00 0.00 39.69 1.82
3061 3164 7.655732 TGACAGACTCGAACAGAATGAAAATTA 59.344 33.333 0.00 0.00 39.69 1.40
3062 3165 8.553459 ACAGACTCGAACAGAATGAAAATTAT 57.447 30.769 0.00 0.00 39.69 1.28
3063 3166 8.446273 ACAGACTCGAACAGAATGAAAATTATG 58.554 33.333 0.00 0.00 39.69 1.90
3064 3167 7.907045 CAGACTCGAACAGAATGAAAATTATGG 59.093 37.037 0.00 0.00 39.69 2.74
3065 3168 7.607991 AGACTCGAACAGAATGAAAATTATGGT 59.392 33.333 0.00 0.00 39.69 3.55
3066 3169 8.786826 ACTCGAACAGAATGAAAATTATGGTA 57.213 30.769 0.00 0.00 39.69 3.25
3067 3170 8.883731 ACTCGAACAGAATGAAAATTATGGTAG 58.116 33.333 0.00 0.00 39.69 3.18
3068 3171 9.098355 CTCGAACAGAATGAAAATTATGGTAGA 57.902 33.333 0.00 0.00 39.69 2.59
3069 3172 9.443323 TCGAACAGAATGAAAATTATGGTAGAA 57.557 29.630 0.00 0.00 39.69 2.10
3070 3173 9.708222 CGAACAGAATGAAAATTATGGTAGAAG 57.292 33.333 0.00 0.00 39.69 2.85
3071 3174 9.508567 GAACAGAATGAAAATTATGGTAGAAGC 57.491 33.333 0.00 0.00 39.69 3.86
3072 3175 8.579850 ACAGAATGAAAATTATGGTAGAAGCA 57.420 30.769 0.00 0.00 39.69 3.91
3073 3176 9.023962 ACAGAATGAAAATTATGGTAGAAGCAA 57.976 29.630 0.00 0.00 39.69 3.91
3074 3177 9.859427 CAGAATGAAAATTATGGTAGAAGCAAA 57.141 29.630 0.00 0.00 39.69 3.68
3175 3278 4.526262 AGCTGTAATCGCTCTTATCTGGAT 59.474 41.667 0.00 0.00 30.49 3.41
3262 3370 9.248291 CATGAATTTGGTACTTAATATGCCAAC 57.752 33.333 8.39 1.08 38.72 3.77
3305 3413 6.265196 ACAGTTTGAAAGGAGCATGATGTTAA 59.735 34.615 0.00 0.00 0.00 2.01
3371 3479 5.991933 AGATAGAGTCAGCTGAAGAACAA 57.008 39.130 20.19 2.49 0.00 2.83
3386 3494 8.562892 GCTGAAGAACAATAATATGCTACACAT 58.437 33.333 0.00 0.00 43.18 3.21
3442 3550 8.308207 GTTTAGGTCTTCTATCAGTTCAGAACT 58.692 37.037 10.27 10.27 44.06 3.01
3516 3624 7.807907 CGGATTAGTTATTTGCAGTTGAAGTTT 59.192 33.333 0.00 0.00 0.00 2.66
3567 3800 4.141733 TGGTGCTATTAGTGCATGAGCTTA 60.142 41.667 0.00 0.00 42.69 3.09
3572 3805 7.917505 GTGCTATTAGTGCATGAGCTTAATTTT 59.082 33.333 0.00 0.00 42.69 1.82
3613 3847 6.391227 TCCTTCATTGAACTCTTTTTGACC 57.609 37.500 0.00 0.00 0.00 4.02
3637 3871 6.128336 CCAGTTTCTAGACTTCATCTTTGCTG 60.128 42.308 0.00 0.00 39.04 4.41
3704 3938 2.662596 CGCACCCTCCACAAGCTA 59.337 61.111 0.00 0.00 0.00 3.32
3705 3939 1.221840 CGCACCCTCCACAAGCTAT 59.778 57.895 0.00 0.00 0.00 2.97
3706 3940 1.091771 CGCACCCTCCACAAGCTATG 61.092 60.000 0.00 0.00 0.00 2.23
3707 3941 0.749454 GCACCCTCCACAAGCTATGG 60.749 60.000 10.18 10.18 38.71 2.74
3708 3942 0.107017 CACCCTCCACAAGCTATGGG 60.107 60.000 15.25 9.73 37.85 4.00
3709 3943 0.550147 ACCCTCCACAAGCTATGGGT 60.550 55.000 15.25 10.28 42.52 4.51
3710 3944 0.181350 CCCTCCACAAGCTATGGGTC 59.819 60.000 15.25 0.00 37.85 4.46
3711 3945 0.181350 CCTCCACAAGCTATGGGTCC 59.819 60.000 15.25 0.00 37.85 4.46
3712 3946 0.911769 CTCCACAAGCTATGGGTCCA 59.088 55.000 15.25 0.00 37.85 4.02
3713 3947 1.492176 CTCCACAAGCTATGGGTCCAT 59.508 52.381 15.25 7.70 37.85 3.41
3714 3948 1.212688 TCCACAAGCTATGGGTCCATG 59.787 52.381 15.25 4.36 37.85 3.66
3715 3949 1.027357 CACAAGCTATGGGTCCATGC 58.973 55.000 12.42 12.76 37.82 4.06
3716 3950 0.625316 ACAAGCTATGGGTCCATGCA 59.375 50.000 12.42 0.00 37.82 3.96
3717 3951 1.027357 CAAGCTATGGGTCCATGCAC 58.973 55.000 12.42 2.38 37.82 4.57
3718 3952 0.625316 AAGCTATGGGTCCATGCACA 59.375 50.000 12.42 0.00 37.82 4.57
3719 3953 0.107017 AGCTATGGGTCCATGCACAC 60.107 55.000 12.42 0.00 37.82 3.82
3720 3954 0.394216 GCTATGGGTCCATGCACACA 60.394 55.000 12.42 0.00 37.82 3.72
3721 3955 1.671979 CTATGGGTCCATGCACACAG 58.328 55.000 12.42 0.00 37.82 3.66
3722 3956 0.394216 TATGGGTCCATGCACACAGC 60.394 55.000 12.42 0.00 45.96 4.40
3793 4027 4.141135 TGTTGTAAAGGGGTTGATCAGGAA 60.141 41.667 0.00 0.00 0.00 3.36
3888 4122 4.058817 GGTACTATGCCATGCTACAACTC 58.941 47.826 0.00 0.00 0.00 3.01
3926 4160 2.919328 GGCCCAGGCTGCAAAACT 60.919 61.111 9.56 0.00 41.60 2.66
3936 4170 2.222027 GCTGCAAAACTAGTCAGGTGT 58.778 47.619 10.38 0.00 0.00 4.16
4064 4298 7.259290 TCACAAGTGAAATGTTTACTCTTCC 57.741 36.000 0.00 0.00 36.53 3.46
4097 4331 3.423539 TGCTGGCTCTAGTTTGTGATT 57.576 42.857 0.00 0.00 0.00 2.57
4199 4435 7.210174 TGATGATGCCTGTACTTTAGATGTAC 58.790 38.462 0.00 0.00 40.27 2.90
4306 4542 5.878116 GTGGTCTTACTATTAACATGTGGCA 59.122 40.000 0.00 0.00 0.00 4.92
4506 4742 9.204570 GCAGTACTTAAACATGAGAAAGAGTTA 57.795 33.333 0.00 0.00 0.00 2.24
4775 5011 3.748668 CGGAAGGTGATGGCCATTCTATT 60.749 47.826 21.84 12.94 0.00 1.73
4783 5019 3.558931 TGGCCATTCTATTGACGACAT 57.441 42.857 0.00 0.00 0.00 3.06
4822 5058 4.328983 CACTGGCAATTGCTTCATGATTTC 59.671 41.667 28.42 9.43 41.70 2.17
4865 5101 7.324935 TCGAACACCTAAAATGCTAGTGATTA 58.675 34.615 0.00 0.00 0.00 1.75
4998 5234 6.758886 AGAAACTCATTTCCTGCTTACGATAG 59.241 38.462 0.00 0.00 44.66 2.08
5030 5266 8.572185 GCACTCTAGATATGATGACTCAACTAA 58.428 37.037 8.06 0.00 34.37 2.24
5412 5648 4.053295 CTCACATGGAAAAGGCAAAGTTG 58.947 43.478 0.00 0.00 0.00 3.16
5754 5990 6.909909 TGCCATAGATTCTACACTATACACG 58.090 40.000 0.00 0.00 0.00 4.49
5787 6023 5.867903 TTGACAAACCTTGACATTTCCAT 57.132 34.783 0.00 0.00 35.43 3.41
5803 6039 3.448093 TCCATGTGGCTAACAATCCAA 57.552 42.857 0.00 0.00 43.61 3.53
5814 6050 6.374333 TGGCTAACAATCCAAGTTAGTGAATC 59.626 38.462 12.87 0.00 46.32 2.52
5815 6051 6.374333 GGCTAACAATCCAAGTTAGTGAATCA 59.626 38.462 12.87 0.00 46.32 2.57
5841 6077 8.548880 AGTAGGTAAAGGCTAACAATGATAGA 57.451 34.615 1.52 0.00 0.00 1.98
5906 6142 5.538118 TGATGCGTACTAAATCATGGGTAG 58.462 41.667 0.00 0.00 0.00 3.18
5907 6143 5.069914 TGATGCGTACTAAATCATGGGTAGT 59.930 40.000 0.00 1.22 32.87 2.73
6008 6245 2.223971 CGACACGCTATATTGGAACCCT 60.224 50.000 0.00 0.00 0.00 4.34
6043 6284 6.380274 TCGATCTTATGGGTTTCAACTCTAGT 59.620 38.462 0.00 0.00 0.00 2.57
6089 6330 9.234827 ACTAAAGGTTTTGTAGTAGTTGTTGTT 57.765 29.630 0.00 0.00 0.00 2.83
6160 6401 4.450976 TCTTGCTTTGCTTACAGACTTCA 58.549 39.130 0.00 0.00 0.00 3.02
6394 6638 2.928396 AAGCCCTGCTACACGGGT 60.928 61.111 0.00 0.00 44.28 5.28
6505 6749 5.132897 AGAGGAAATCGTAGATGCAGATC 57.867 43.478 0.00 0.00 45.12 2.75
6532 6776 3.100671 AGTGAACACACCCTATCCTCTC 58.899 50.000 7.68 0.00 35.39 3.20
6582 6826 0.819259 ATGACGGCAACTGCACACTT 60.819 50.000 0.00 0.00 44.36 3.16
6590 6834 2.411904 CAACTGCACACTTCCTCTCTC 58.588 52.381 0.00 0.00 0.00 3.20
6594 6844 3.135530 ACTGCACACTTCCTCTCTCTTTT 59.864 43.478 0.00 0.00 0.00 2.27
6747 7001 3.251004 GCGTCTGGTCTTTGTTCTGAAAT 59.749 43.478 0.00 0.00 0.00 2.17
6890 7181 6.811665 GTGCAGTTTAAAAGAAGAAAACCACT 59.188 34.615 0.00 0.00 34.39 4.00
6915 7206 8.154649 TGAGTTCAGACTAATGGAAAACTTTC 57.845 34.615 0.00 0.00 35.88 2.62
6916 7207 7.773224 TGAGTTCAGACTAATGGAAAACTTTCA 59.227 33.333 4.67 0.00 36.15 2.69
6917 7208 8.697507 AGTTCAGACTAATGGAAAACTTTCAT 57.302 30.769 4.67 0.00 35.06 2.57
6918 7209 8.787852 AGTTCAGACTAATGGAAAACTTTCATC 58.212 33.333 4.67 0.00 35.06 2.92
6919 7210 8.787852 GTTCAGACTAATGGAAAACTTTCATCT 58.212 33.333 4.67 0.00 38.92 2.90
6923 7214 9.965902 AGACTAATGGAAAACTTTCATCTATGT 57.034 29.630 4.67 0.00 38.92 2.29
6925 7216 9.965902 ACTAATGGAAAACTTTCATCTATGTCT 57.034 29.630 4.67 0.00 38.92 3.41
6930 7221 9.383519 TGGAAAACTTTCATCTATGTCTATGAC 57.616 33.333 4.67 0.00 38.92 3.06
6931 7222 9.606631 GGAAAACTTTCATCTATGTCTATGACT 57.393 33.333 4.67 0.00 38.92 3.41
6953 7244 8.160765 TGACTACTTGTAATGAAGAAAATCCCA 58.839 33.333 0.00 0.00 0.00 4.37
6954 7245 9.178758 GACTACTTGTAATGAAGAAAATCCCAT 57.821 33.333 0.00 0.00 0.00 4.00
6955 7246 9.178758 ACTACTTGTAATGAAGAAAATCCCATC 57.821 33.333 0.00 0.00 0.00 3.51
6956 7247 7.410120 ACTTGTAATGAAGAAAATCCCATCC 57.590 36.000 0.00 0.00 0.00 3.51
6958 7249 6.773976 TGTAATGAAGAAAATCCCATCCAC 57.226 37.500 0.00 0.00 0.00 4.02
6960 7251 4.614967 ATGAAGAAAATCCCATCCACCT 57.385 40.909 0.00 0.00 0.00 4.00
6961 7252 3.700538 TGAAGAAAATCCCATCCACCTG 58.299 45.455 0.00 0.00 0.00 4.00
6964 7255 4.236527 AGAAAATCCCATCCACCTGTAC 57.763 45.455 0.00 0.00 0.00 2.90
6965 7256 2.710096 AAATCCCATCCACCTGTACG 57.290 50.000 0.00 0.00 0.00 3.67
6967 7258 2.103153 ATCCCATCCACCTGTACGAT 57.897 50.000 0.00 0.00 0.00 3.73
6969 7260 1.484653 TCCCATCCACCTGTACGATTG 59.515 52.381 0.00 0.00 0.00 2.67
6970 7261 1.484653 CCCATCCACCTGTACGATTGA 59.515 52.381 0.00 0.00 0.00 2.57
6972 7263 2.936498 CCATCCACCTGTACGATTGAAC 59.064 50.000 0.00 0.00 0.00 3.18
6973 7264 2.357327 TCCACCTGTACGATTGAACG 57.643 50.000 0.00 0.00 39.31 3.95
6976 7267 1.126113 CACCTGTACGATTGAACGTGC 59.874 52.381 0.00 0.00 46.02 5.34
6977 7268 1.000506 ACCTGTACGATTGAACGTGCT 59.999 47.619 0.00 0.00 45.80 4.40
6979 7270 2.092211 CCTGTACGATTGAACGTGCTTC 59.908 50.000 0.00 0.00 45.80 3.86
6980 7271 2.987149 CTGTACGATTGAACGTGCTTCT 59.013 45.455 0.00 0.00 45.80 2.85
6981 7272 4.163458 TGTACGATTGAACGTGCTTCTA 57.837 40.909 0.00 0.00 45.80 2.10
6982 7273 4.548494 TGTACGATTGAACGTGCTTCTAA 58.452 39.130 0.00 0.00 45.80 2.10
6983 7274 5.165676 TGTACGATTGAACGTGCTTCTAAT 58.834 37.500 0.00 0.00 45.80 1.73
6984 7275 5.636121 TGTACGATTGAACGTGCTTCTAATT 59.364 36.000 0.00 0.00 45.80 1.40
6985 7276 5.204673 ACGATTGAACGTGCTTCTAATTC 57.795 39.130 0.00 0.00 44.84 2.17
6986 7277 4.688879 ACGATTGAACGTGCTTCTAATTCA 59.311 37.500 0.00 0.00 44.84 2.57
6989 7280 5.940192 TTGAACGTGCTTCTAATTCATGT 57.060 34.783 0.00 0.00 0.00 3.21
6990 7281 5.940192 TGAACGTGCTTCTAATTCATGTT 57.060 34.783 0.00 2.31 41.14 2.71
6991 7282 5.688823 TGAACGTGCTTCTAATTCATGTTG 58.311 37.500 6.45 0.00 39.29 3.33
6993 7284 5.689383 ACGTGCTTCTAATTCATGTTGTT 57.311 34.783 0.00 0.00 0.00 2.83
6994 7285 6.072112 ACGTGCTTCTAATTCATGTTGTTT 57.928 33.333 0.00 0.00 0.00 2.83
6995 7286 6.503524 ACGTGCTTCTAATTCATGTTGTTTT 58.496 32.000 0.00 0.00 0.00 2.43
6996 7287 6.636850 ACGTGCTTCTAATTCATGTTGTTTTC 59.363 34.615 0.00 0.00 0.00 2.29
6997 7288 6.088085 CGTGCTTCTAATTCATGTTGTTTTCC 59.912 38.462 0.00 0.00 0.00 3.13
6998 7289 6.366061 GTGCTTCTAATTCATGTTGTTTTCCC 59.634 38.462 0.00 0.00 0.00 3.97
6999 7290 6.267471 TGCTTCTAATTCATGTTGTTTTCCCT 59.733 34.615 0.00 0.00 0.00 4.20
7001 7292 7.595819 TTCTAATTCATGTTGTTTTCCCTGT 57.404 32.000 0.00 0.00 0.00 4.00
7002 7293 7.595819 TCTAATTCATGTTGTTTTCCCTGTT 57.404 32.000 0.00 0.00 0.00 3.16
7003 7294 8.017418 TCTAATTCATGTTGTTTTCCCTGTTT 57.983 30.769 0.00 0.00 0.00 2.83
7004 7295 8.141268 TCTAATTCATGTTGTTTTCCCTGTTTC 58.859 33.333 0.00 0.00 0.00 2.78
7005 7296 4.664150 TCATGTTGTTTTCCCTGTTTCC 57.336 40.909 0.00 0.00 0.00 3.13
7007 7298 4.467795 TCATGTTGTTTTCCCTGTTTCCAA 59.532 37.500 0.00 0.00 0.00 3.53
7008 7299 4.891992 TGTTGTTTTCCCTGTTTCCAAA 57.108 36.364 0.00 0.00 0.00 3.28
7009 7300 5.428184 TGTTGTTTTCCCTGTTTCCAAAT 57.572 34.783 0.00 0.00 0.00 2.32
7010 7301 5.810095 TGTTGTTTTCCCTGTTTCCAAATT 58.190 33.333 0.00 0.00 0.00 1.82
7011 7302 5.877564 TGTTGTTTTCCCTGTTTCCAAATTC 59.122 36.000 0.00 0.00 0.00 2.17
7060 7351 1.337387 AGCTCGTTTCCTCCGTATAGC 59.663 52.381 0.00 0.00 0.00 2.97
7061 7352 1.337387 GCTCGTTTCCTCCGTATAGCT 59.663 52.381 0.00 0.00 0.00 3.32
7109 7426 3.365265 GCCAACAGGGAGCAACGG 61.365 66.667 0.00 0.00 40.01 4.44
7129 7642 3.306780 CGGAGTGTTGTAGGAACTTGGAT 60.307 47.826 0.00 0.00 41.75 3.41
7170 7683 9.659830 AAAACGTGAAACATGAGTAGTTTATTC 57.340 29.630 0.00 0.00 39.15 1.75
7211 7724 2.751806 AGTACCTACTCTCCGGAAAACG 59.248 50.000 5.23 0.00 43.80 3.60
7302 7818 6.312918 GCAGGACTTCGTGAAGAAATGTATTA 59.687 38.462 16.10 0.00 40.79 0.98
7304 7820 7.545965 CAGGACTTCGTGAAGAAATGTATTACT 59.454 37.037 16.10 0.00 40.79 2.24
7305 7821 7.760340 AGGACTTCGTGAAGAAATGTATTACTC 59.240 37.037 16.10 0.00 40.79 2.59
7308 7824 6.540438 TCGTGAAGAAATGTATTACTCCCT 57.460 37.500 0.00 0.00 0.00 4.20
7309 7825 6.570692 TCGTGAAGAAATGTATTACTCCCTC 58.429 40.000 0.00 0.00 0.00 4.30
7310 7826 5.753921 CGTGAAGAAATGTATTACTCCCTCC 59.246 44.000 0.00 0.00 0.00 4.30
7311 7827 5.753921 GTGAAGAAATGTATTACTCCCTCCG 59.246 44.000 0.00 0.00 0.00 4.63
7313 7829 5.952347 AGAAATGTATTACTCCCTCCGTT 57.048 39.130 0.00 0.00 0.00 4.44
7314 7830 5.915175 AGAAATGTATTACTCCCTCCGTTC 58.085 41.667 0.00 0.00 0.00 3.95
7315 7831 4.317671 AATGTATTACTCCCTCCGTTCG 57.682 45.455 0.00 0.00 0.00 3.95
7316 7832 2.026641 TGTATTACTCCCTCCGTTCGG 58.973 52.381 4.74 4.74 0.00 4.30
7320 7836 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
7321 7837 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
7322 7838 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
7323 7839 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
7325 7841 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
7326 7842 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
7327 7843 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
7328 7844 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
7329 7845 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
7330 7846 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
7331 7847 3.495193 CGTTCGGAATTACTTGTCTCGA 58.505 45.455 0.00 0.00 0.00 4.04
7332 7848 3.916172 CGTTCGGAATTACTTGTCTCGAA 59.084 43.478 0.00 0.00 33.66 3.71
7333 7849 4.383649 CGTTCGGAATTACTTGTCTCGAAA 59.616 41.667 0.00 0.00 37.00 3.46
7334 7850 5.107760 CGTTCGGAATTACTTGTCTCGAAAA 60.108 40.000 0.00 0.00 37.00 2.29
7335 7851 6.400727 CGTTCGGAATTACTTGTCTCGAAAAT 60.401 38.462 0.00 0.00 37.00 1.82
7336 7852 6.403333 TCGGAATTACTTGTCTCGAAAATG 57.597 37.500 0.00 0.00 0.00 2.32
7337 7853 5.350365 TCGGAATTACTTGTCTCGAAAATGG 59.650 40.000 0.00 0.00 0.00 3.16
7338 7854 5.350365 CGGAATTACTTGTCTCGAAAATGGA 59.650 40.000 0.00 0.00 0.00 3.41
7340 7856 7.189512 GGAATTACTTGTCTCGAAAATGGATG 58.810 38.462 0.00 0.00 0.00 3.51
7342 7858 8.786826 AATTACTTGTCTCGAAAATGGATGTA 57.213 30.769 0.00 0.00 0.00 2.29
7344 7860 6.910536 ACTTGTCTCGAAAATGGATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
7345 7861 6.644347 ACTTGTCTCGAAAATGGATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
7347 7863 7.923344 ACTTGTCTCGAAAATGGATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
7349 7865 8.007405 TGTCTCGAAAATGGATGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
7350 7866 7.921214 TGTCTCGAAAATGGATGTATCTAGAAC 59.079 37.037 0.00 0.00 0.00 3.01
7351 7867 8.138712 GTCTCGAAAATGGATGTATCTAGAACT 58.861 37.037 0.00 0.00 0.00 3.01
7379 7895 9.698309 AAATACGTCTAGATACATCCATTTCTG 57.302 33.333 0.00 0.00 0.00 3.02
7380 7896 6.716934 ACGTCTAGATACATCCATTTCTGT 57.283 37.500 0.00 0.00 0.00 3.41
7381 7897 6.507900 ACGTCTAGATACATCCATTTCTGTG 58.492 40.000 0.00 0.00 0.00 3.66
7382 7898 6.321435 ACGTCTAGATACATCCATTTCTGTGA 59.679 38.462 0.00 0.00 0.00 3.58
7383 7899 6.638873 CGTCTAGATACATCCATTTCTGTGAC 59.361 42.308 0.00 0.00 0.00 3.67
7386 7902 8.200120 TCTAGATACATCCATTTCTGTGACAAG 58.800 37.037 0.00 0.00 0.00 3.16
7388 7904 7.851228 AGATACATCCATTTCTGTGACAAGTA 58.149 34.615 0.00 0.00 0.00 2.24
7390 7906 9.113838 GATACATCCATTTCTGTGACAAGTAAT 57.886 33.333 0.00 0.00 0.00 1.89
7391 7907 7.765695 ACATCCATTTCTGTGACAAGTAATT 57.234 32.000 0.00 0.00 0.00 1.40
7393 7909 6.817765 TCCATTTCTGTGACAAGTAATTCC 57.182 37.500 0.00 0.00 0.00 3.01
7394 7910 5.411361 TCCATTTCTGTGACAAGTAATTCCG 59.589 40.000 0.00 0.00 0.00 4.30
7395 7911 5.411361 CCATTTCTGTGACAAGTAATTCCGA 59.589 40.000 0.00 0.00 0.00 4.55
7397 7913 5.917541 TTCTGTGACAAGTAATTCCGAAC 57.082 39.130 0.00 0.00 0.00 3.95
7398 7914 4.951254 TCTGTGACAAGTAATTCCGAACA 58.049 39.130 0.00 0.00 0.00 3.18
7399 7915 4.988540 TCTGTGACAAGTAATTCCGAACAG 59.011 41.667 0.00 0.00 35.07 3.16
7400 7916 4.062293 TGTGACAAGTAATTCCGAACAGG 58.938 43.478 0.00 0.00 42.97 4.00
7402 7918 3.007635 GACAAGTAATTCCGAACAGGGG 58.992 50.000 0.00 0.00 41.52 4.79
7403 7919 2.640826 ACAAGTAATTCCGAACAGGGGA 59.359 45.455 0.00 0.00 41.52 4.81
7404 7920 3.270877 CAAGTAATTCCGAACAGGGGAG 58.729 50.000 0.00 0.00 41.52 4.30
7407 7948 3.450096 AGTAATTCCGAACAGGGGAGTAC 59.550 47.826 0.00 0.00 41.52 2.73
7413 7954 0.677842 GAACAGGGGAGTACGTGTGT 59.322 55.000 0.00 0.00 39.20 3.72
7414 7955 1.888512 GAACAGGGGAGTACGTGTGTA 59.111 52.381 0.00 0.00 39.20 2.90
7475 8016 2.467566 ATCCCGTGCTTTAAACGTCT 57.532 45.000 0.00 0.00 39.38 4.18
7482 8023 0.863144 GCTTTAAACGTCTGCGGACA 59.137 50.000 24.91 2.73 42.21 4.02
7483 8024 1.262151 GCTTTAAACGTCTGCGGACAA 59.738 47.619 24.91 9.15 42.21 3.18
7484 8025 2.899977 CTTTAAACGTCTGCGGACAAC 58.100 47.619 24.91 0.00 42.21 3.32
7486 8027 2.228138 TAAACGTCTGCGGACAACTT 57.772 45.000 24.91 15.77 42.21 2.66
7493 8034 0.878523 CTGCGGACAACTTCGGTCAA 60.879 55.000 0.00 0.00 37.00 3.18
7494 8035 0.462225 TGCGGACAACTTCGGTCAAA 60.462 50.000 0.00 0.00 37.00 2.69
7495 8036 0.041576 GCGGACAACTTCGGTCAAAC 60.042 55.000 0.00 0.00 37.00 2.93
7503 8046 4.230657 CAACTTCGGTCAAACACAAACAA 58.769 39.130 0.00 0.00 0.00 2.83
7511 8054 3.982058 GTCAAACACAAACAACGTTGGAA 59.018 39.130 30.34 2.39 32.50 3.53
7527 8070 3.475566 TGGAAGGCTCCTCAAATATCG 57.524 47.619 0.00 0.00 42.94 2.92
7533 8076 5.808366 AGGCTCCTCAAATATCGTGATTA 57.192 39.130 0.00 0.00 0.00 1.75
7575 8118 9.752961 CATATAAAAATCTCAAATCCATGCACA 57.247 29.630 0.00 0.00 0.00 4.57
7578 8121 4.563337 AATCTCAAATCCATGCACATCG 57.437 40.909 0.00 0.00 0.00 3.84
7590 8134 7.587037 TCCATGCACATCGATCATATAGATA 57.413 36.000 0.00 0.00 37.00 1.98
7688 8239 9.665719 AATTCAAACATTAAACTCACTGGTTTT 57.334 25.926 0.00 0.00 39.66 2.43
7689 8240 8.696410 TTCAAACATTAAACTCACTGGTTTTC 57.304 30.769 0.00 0.00 39.66 2.29
7691 8242 7.757624 TCAAACATTAAACTCACTGGTTTTCAC 59.242 33.333 0.00 0.00 39.66 3.18
7692 8243 7.404671 AACATTAAACTCACTGGTTTTCACT 57.595 32.000 0.00 0.00 39.66 3.41
7693 8244 6.795399 ACATTAAACTCACTGGTTTTCACTG 58.205 36.000 0.00 0.00 39.66 3.66
7716 8267 6.449635 GTGGGTTCACATATGCTTCATAAA 57.550 37.500 1.58 0.00 43.13 1.40
7738 8291 1.798223 TCATTGAGTAGTTGCGTGCAC 59.202 47.619 6.82 6.82 0.00 4.57
7739 8292 0.790207 ATTGAGTAGTTGCGTGCACG 59.210 50.000 34.01 34.01 43.27 5.34
7744 8297 1.068125 AGTAGTTGCGTGCACGTGATA 60.068 47.619 36.80 22.31 42.22 2.15
7753 8306 2.214244 CGTGCACGTGATAATCTCGAAG 59.786 50.000 30.50 0.00 36.91 3.79
7807 8360 2.816087 GCTCTGCATCTTGTTTCAGGAA 59.184 45.455 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 5.573337 AAAATCTTGCTCCAATCTACTGC 57.427 39.130 0.00 0.00 0.00 4.40
88 92 7.402640 GTCGATCACTGGATTTCTTATGTTTC 58.597 38.462 0.00 0.00 32.67 2.78
159 163 5.072193 AGTTCCCCTAACTACCTTCGAAAAA 59.928 40.000 0.00 0.00 46.85 1.94
160 164 4.594491 AGTTCCCCTAACTACCTTCGAAAA 59.406 41.667 0.00 0.00 46.85 2.29
161 165 4.162651 AGTTCCCCTAACTACCTTCGAAA 58.837 43.478 0.00 0.00 46.85 3.46
162 166 3.782992 AGTTCCCCTAACTACCTTCGAA 58.217 45.455 0.00 0.00 46.85 3.71
163 167 3.463048 AGTTCCCCTAACTACCTTCGA 57.537 47.619 0.00 0.00 46.85 3.71
276 283 9.696917 ATGCGAAAAAGAGAAGAACATAAAATT 57.303 25.926 0.00 0.00 0.00 1.82
317 325 1.040646 CATAGCCTGGAGTTCGCCTA 58.959 55.000 0.00 0.00 0.00 3.93
328 336 1.474077 GCCAAACCTTGTCATAGCCTG 59.526 52.381 0.00 0.00 0.00 4.85
384 392 1.621107 GCTAACAACGATCGTCGGAA 58.379 50.000 22.98 7.16 45.59 4.30
405 413 1.534235 ACCAGAGTTCACCGGAGCT 60.534 57.895 9.46 0.00 37.29 4.09
406 414 1.374758 CACCAGAGTTCACCGGAGC 60.375 63.158 9.46 0.00 0.00 4.70
407 415 0.898320 ATCACCAGAGTTCACCGGAG 59.102 55.000 9.46 0.00 0.00 4.63
408 416 0.895530 GATCACCAGAGTTCACCGGA 59.104 55.000 9.46 0.00 0.00 5.14
409 417 0.898320 AGATCACCAGAGTTCACCGG 59.102 55.000 0.00 0.00 0.00 5.28
410 418 2.029020 TGAAGATCACCAGAGTTCACCG 60.029 50.000 0.00 0.00 30.03 4.94
411 419 3.007398 ACTGAAGATCACCAGAGTTCACC 59.993 47.826 17.70 0.00 34.65 4.02
412 420 3.993081 CACTGAAGATCACCAGAGTTCAC 59.007 47.826 17.70 0.00 34.65 3.18
413 421 3.897505 TCACTGAAGATCACCAGAGTTCA 59.102 43.478 17.70 6.32 34.65 3.18
416 424 2.564947 GGTCACTGAAGATCACCAGAGT 59.435 50.000 17.70 0.40 34.65 3.24
1328 1407 2.028484 GAGGGCAACACGACACGA 59.972 61.111 0.00 0.00 39.74 4.35
1371 1450 3.371285 GGCCAGAAAGATAGACGTCAAAC 59.629 47.826 19.50 8.00 0.00 2.93
1395 1474 1.925185 GAACTAACCGAGGAATGCGTC 59.075 52.381 0.00 0.00 0.00 5.19
1426 1505 4.533919 TCGTAAACCGGAATGTAAGGAA 57.466 40.909 9.46 0.00 37.11 3.36
1466 1545 0.388907 TACAACTACCTGCGTTCGCC 60.389 55.000 14.44 0.00 0.00 5.54
1479 1560 7.711339 GCCATTGAAGTATAGCTTACTACAACT 59.289 37.037 0.00 0.00 37.59 3.16
1480 1561 7.041984 GGCCATTGAAGTATAGCTTACTACAAC 60.042 40.741 0.00 0.00 37.59 3.32
1481 1562 6.990349 GGCCATTGAAGTATAGCTTACTACAA 59.010 38.462 0.00 0.00 37.59 2.41
1482 1563 6.099125 TGGCCATTGAAGTATAGCTTACTACA 59.901 38.462 0.00 0.00 37.59 2.74
1517 1598 6.912426 TCCCCTATCGCTAGAATATGACTAT 58.088 40.000 0.00 0.00 0.00 2.12
1519 1600 5.194473 TCCCCTATCGCTAGAATATGACT 57.806 43.478 0.00 0.00 0.00 3.41
1536 1617 8.612145 GGGAATGTGTAATATTTACTATCCCCT 58.388 37.037 20.63 0.00 35.62 4.79
1586 1672 9.559958 AATTTTCTACTGCATTTGTATTTCTCG 57.440 29.630 0.00 0.00 0.00 4.04
1654 1740 7.714377 GCCATATTTATCAGAGTATGGGATGAG 59.286 40.741 11.09 0.00 42.36 2.90
1766 1852 2.093783 CGTTCTTGATACCGGCAGTTTC 59.906 50.000 0.00 0.00 0.00 2.78
1772 1858 5.473796 TTTATTTCGTTCTTGATACCGGC 57.526 39.130 0.00 0.00 0.00 6.13
1786 1872 7.734924 TCCTCCATGAGATTCATTTATTTCG 57.265 36.000 0.00 0.00 34.28 3.46
1861 1958 1.522258 CAAACGGTGCTGCACAAAATC 59.478 47.619 31.35 14.46 35.86 2.17
2114 2211 7.294676 TCAAACTGTGACGATCAATTATCTG 57.705 36.000 0.00 0.00 31.87 2.90
2593 2696 1.468914 GCATCGGGGTCTTCAGTTTTC 59.531 52.381 0.00 0.00 0.00 2.29
2650 2753 2.538512 TTGCATCATCCTGAGATCCG 57.461 50.000 0.00 0.00 0.00 4.18
2758 2861 2.938451 TCTATCCAAATTGTCAGCAGCG 59.062 45.455 0.00 0.00 0.00 5.18
2831 2934 9.897744 ACATGATTTGACATTTATATTAAGGCG 57.102 29.630 0.00 0.00 0.00 5.52
2864 2967 6.458888 CGAGTCTATCACAAGATGAGCAACTA 60.459 42.308 0.00 0.00 41.91 2.24
2877 2980 5.897377 TCATTCTGTTCGAGTCTATCACA 57.103 39.130 0.00 0.00 0.00 3.58
2939 3042 4.082245 AGTTACCCAAATTGATTCCGCAAG 60.082 41.667 0.00 0.00 0.00 4.01
2940 3043 3.829601 AGTTACCCAAATTGATTCCGCAA 59.170 39.130 0.00 0.00 0.00 4.85
2941 3044 3.192422 CAGTTACCCAAATTGATTCCGCA 59.808 43.478 0.00 0.00 0.00 5.69
2942 3045 3.442273 TCAGTTACCCAAATTGATTCCGC 59.558 43.478 0.00 0.00 29.59 5.54
2943 3046 5.835113 ATCAGTTACCCAAATTGATTCCG 57.165 39.130 0.00 0.00 40.54 4.30
2944 3047 7.489160 GGTAATCAGTTACCCAAATTGATTCC 58.511 38.462 10.53 8.93 46.03 3.01
2957 3060 4.838904 AGGTTGGGAGGTAATCAGTTAC 57.161 45.455 0.00 0.00 39.57 2.50
2958 3061 4.600111 ACAAGGTTGGGAGGTAATCAGTTA 59.400 41.667 0.00 0.00 0.00 2.24
2959 3062 3.397955 ACAAGGTTGGGAGGTAATCAGTT 59.602 43.478 0.00 0.00 0.00 3.16
2960 3063 2.986728 ACAAGGTTGGGAGGTAATCAGT 59.013 45.455 0.00 0.00 0.00 3.41
2961 3064 3.721087 ACAAGGTTGGGAGGTAATCAG 57.279 47.619 0.00 0.00 0.00 2.90
2962 3065 4.463050 AAACAAGGTTGGGAGGTAATCA 57.537 40.909 0.00 0.00 0.00 2.57
2963 3066 5.279306 GGAAAAACAAGGTTGGGAGGTAATC 60.279 44.000 0.00 0.00 0.00 1.75
2964 3067 4.591498 GGAAAAACAAGGTTGGGAGGTAAT 59.409 41.667 0.00 0.00 0.00 1.89
2965 3068 3.962063 GGAAAAACAAGGTTGGGAGGTAA 59.038 43.478 0.00 0.00 0.00 2.85
2966 3069 3.568443 GGAAAAACAAGGTTGGGAGGTA 58.432 45.455 0.00 0.00 0.00 3.08
2967 3070 2.394632 GGAAAAACAAGGTTGGGAGGT 58.605 47.619 0.00 0.00 0.00 3.85
2968 3071 1.339929 CGGAAAAACAAGGTTGGGAGG 59.660 52.381 0.00 0.00 0.00 4.30
2969 3072 1.269569 GCGGAAAAACAAGGTTGGGAG 60.270 52.381 0.00 0.00 0.00 4.30
2970 3073 0.747852 GCGGAAAAACAAGGTTGGGA 59.252 50.000 0.00 0.00 0.00 4.37
2971 3074 0.750249 AGCGGAAAAACAAGGTTGGG 59.250 50.000 0.00 0.00 0.00 4.12
2972 3075 2.595124 AAGCGGAAAAACAAGGTTGG 57.405 45.000 0.00 0.00 0.00 3.77
2973 3076 7.883229 ATATTAAAGCGGAAAAACAAGGTTG 57.117 32.000 0.00 0.00 0.00 3.77
2974 3077 9.984190 TTTATATTAAAGCGGAAAAACAAGGTT 57.016 25.926 0.00 0.00 0.00 3.50
2999 3102 9.467258 CAACTACTGAAAACATGATTTGACATT 57.533 29.630 5.59 0.00 0.00 2.71
3000 3103 7.596248 GCAACTACTGAAAACATGATTTGACAT 59.404 33.333 5.59 0.00 0.00 3.06
3001 3104 6.917477 GCAACTACTGAAAACATGATTTGACA 59.083 34.615 5.59 0.00 0.00 3.58
3002 3105 7.141363 AGCAACTACTGAAAACATGATTTGAC 58.859 34.615 5.59 0.00 0.00 3.18
3003 3106 7.013178 TGAGCAACTACTGAAAACATGATTTGA 59.987 33.333 5.59 0.00 0.00 2.69
3004 3107 7.140705 TGAGCAACTACTGAAAACATGATTTG 58.859 34.615 5.59 0.00 0.00 2.32
3005 3108 7.275888 TGAGCAACTACTGAAAACATGATTT 57.724 32.000 0.00 0.00 0.00 2.17
3006 3109 6.882610 TGAGCAACTACTGAAAACATGATT 57.117 33.333 0.00 0.00 0.00 2.57
3007 3110 6.883217 AGATGAGCAACTACTGAAAACATGAT 59.117 34.615 0.00 0.00 0.00 2.45
3008 3111 6.233434 AGATGAGCAACTACTGAAAACATGA 58.767 36.000 0.00 0.00 0.00 3.07
3009 3112 6.492007 AGATGAGCAACTACTGAAAACATG 57.508 37.500 0.00 0.00 0.00 3.21
3010 3113 6.488006 ACAAGATGAGCAACTACTGAAAACAT 59.512 34.615 0.00 0.00 0.00 2.71
3011 3114 5.822519 ACAAGATGAGCAACTACTGAAAACA 59.177 36.000 0.00 0.00 0.00 2.83
3012 3115 6.017934 TCACAAGATGAGCAACTACTGAAAAC 60.018 38.462 0.00 0.00 31.91 2.43
3013 3116 6.017934 GTCACAAGATGAGCAACTACTGAAAA 60.018 38.462 0.00 0.00 38.28 2.29
3014 3117 5.466728 GTCACAAGATGAGCAACTACTGAAA 59.533 40.000 0.00 0.00 38.28 2.69
3015 3118 4.991056 GTCACAAGATGAGCAACTACTGAA 59.009 41.667 0.00 0.00 38.28 3.02
3016 3119 4.039124 TGTCACAAGATGAGCAACTACTGA 59.961 41.667 0.00 0.00 38.28 3.41
3017 3120 4.309933 TGTCACAAGATGAGCAACTACTG 58.690 43.478 0.00 0.00 38.28 2.74
3018 3121 4.281941 TCTGTCACAAGATGAGCAACTACT 59.718 41.667 0.00 0.00 38.28 2.57
3019 3122 4.387256 GTCTGTCACAAGATGAGCAACTAC 59.613 45.833 0.00 0.00 38.28 2.73
3020 3123 4.281941 AGTCTGTCACAAGATGAGCAACTA 59.718 41.667 0.00 0.00 38.28 2.24
3021 3124 3.070734 AGTCTGTCACAAGATGAGCAACT 59.929 43.478 0.00 0.00 38.28 3.16
3022 3125 3.397482 AGTCTGTCACAAGATGAGCAAC 58.603 45.455 0.00 0.00 38.28 4.17
3023 3126 3.657634 GAGTCTGTCACAAGATGAGCAA 58.342 45.455 0.00 0.00 38.28 3.91
3024 3127 2.352127 CGAGTCTGTCACAAGATGAGCA 60.352 50.000 0.00 0.00 38.28 4.26
3025 3128 2.095008 TCGAGTCTGTCACAAGATGAGC 60.095 50.000 0.00 0.00 38.28 4.26
3026 3129 3.839051 TCGAGTCTGTCACAAGATGAG 57.161 47.619 0.00 0.00 38.28 2.90
3027 3130 3.317993 TGTTCGAGTCTGTCACAAGATGA 59.682 43.478 0.00 0.00 33.79 2.92
3028 3131 3.642705 TGTTCGAGTCTGTCACAAGATG 58.357 45.455 0.00 0.00 0.00 2.90
3029 3132 3.570125 TCTGTTCGAGTCTGTCACAAGAT 59.430 43.478 0.00 0.00 0.00 2.40
3030 3133 2.949644 TCTGTTCGAGTCTGTCACAAGA 59.050 45.455 0.00 0.00 0.00 3.02
3031 3134 3.355626 TCTGTTCGAGTCTGTCACAAG 57.644 47.619 0.00 0.00 0.00 3.16
3032 3135 3.793797 TTCTGTTCGAGTCTGTCACAA 57.206 42.857 0.00 0.00 0.00 3.33
3033 3136 3.317993 TCATTCTGTTCGAGTCTGTCACA 59.682 43.478 0.00 0.00 0.00 3.58
3034 3137 3.902150 TCATTCTGTTCGAGTCTGTCAC 58.098 45.455 0.00 0.00 0.00 3.67
3035 3138 4.584327 TTCATTCTGTTCGAGTCTGTCA 57.416 40.909 0.00 0.00 0.00 3.58
3036 3139 5.907197 TTTTCATTCTGTTCGAGTCTGTC 57.093 39.130 0.00 0.00 0.00 3.51
3037 3140 6.867662 AATTTTCATTCTGTTCGAGTCTGT 57.132 33.333 0.00 0.00 0.00 3.41
3038 3141 7.907045 CCATAATTTTCATTCTGTTCGAGTCTG 59.093 37.037 0.00 0.00 0.00 3.51
3039 3142 7.607991 ACCATAATTTTCATTCTGTTCGAGTCT 59.392 33.333 0.00 0.00 0.00 3.24
3040 3143 7.752695 ACCATAATTTTCATTCTGTTCGAGTC 58.247 34.615 0.00 0.00 0.00 3.36
3041 3144 7.687941 ACCATAATTTTCATTCTGTTCGAGT 57.312 32.000 0.00 0.00 0.00 4.18
3042 3145 9.098355 TCTACCATAATTTTCATTCTGTTCGAG 57.902 33.333 0.00 0.00 0.00 4.04
3043 3146 9.443323 TTCTACCATAATTTTCATTCTGTTCGA 57.557 29.630 0.00 0.00 0.00 3.71
3044 3147 9.708222 CTTCTACCATAATTTTCATTCTGTTCG 57.292 33.333 0.00 0.00 0.00 3.95
3045 3148 9.508567 GCTTCTACCATAATTTTCATTCTGTTC 57.491 33.333 0.00 0.00 0.00 3.18
3046 3149 9.023962 TGCTTCTACCATAATTTTCATTCTGTT 57.976 29.630 0.00 0.00 0.00 3.16
3047 3150 8.579850 TGCTTCTACCATAATTTTCATTCTGT 57.420 30.769 0.00 0.00 0.00 3.41
3048 3151 9.859427 TTTGCTTCTACCATAATTTTCATTCTG 57.141 29.630 0.00 0.00 0.00 3.02
3050 3153 9.860898 ACTTTGCTTCTACCATAATTTTCATTC 57.139 29.630 0.00 0.00 0.00 2.67
3054 3157 9.569167 GGTAACTTTGCTTCTACCATAATTTTC 57.431 33.333 0.00 0.00 34.99 2.29
3055 3158 8.528643 GGGTAACTTTGCTTCTACCATAATTTT 58.471 33.333 0.00 0.00 36.34 1.82
3056 3159 7.893833 AGGGTAACTTTGCTTCTACCATAATTT 59.106 33.333 0.00 0.00 36.34 1.82
3057 3160 7.410991 AGGGTAACTTTGCTTCTACCATAATT 58.589 34.615 0.00 0.00 36.34 1.40
3058 3161 6.970191 AGGGTAACTTTGCTTCTACCATAAT 58.030 36.000 0.00 0.00 36.34 1.28
3059 3162 6.382919 AGGGTAACTTTGCTTCTACCATAA 57.617 37.500 0.00 0.00 36.34 1.90
3060 3163 6.382919 AAGGGTAACTTTGCTTCTACCATA 57.617 37.500 0.00 0.00 35.35 2.74
3061 3164 4.929146 AGGGTAACTTTGCTTCTACCAT 57.071 40.909 0.00 0.00 36.34 3.55
3062 3165 4.717279 AAGGGTAACTTTGCTTCTACCA 57.283 40.909 0.00 0.00 35.35 3.25
3063 3166 7.825761 TGTTATAAGGGTAACTTTGCTTCTACC 59.174 37.037 0.00 0.00 40.64 3.18
3064 3167 8.782339 TGTTATAAGGGTAACTTTGCTTCTAC 57.218 34.615 0.00 0.00 40.64 2.59
3065 3168 9.969001 AATGTTATAAGGGTAACTTTGCTTCTA 57.031 29.630 0.00 0.00 40.64 2.10
3066 3169 8.879427 AATGTTATAAGGGTAACTTTGCTTCT 57.121 30.769 0.00 0.00 40.64 2.85
3067 3170 9.923143 AAAATGTTATAAGGGTAACTTTGCTTC 57.077 29.630 0.00 0.00 40.64 3.86
3068 3171 9.923143 GAAAATGTTATAAGGGTAACTTTGCTT 57.077 29.630 0.00 0.00 40.64 3.91
3069 3172 8.528643 GGAAAATGTTATAAGGGTAACTTTGCT 58.471 33.333 0.00 0.00 40.64 3.91
3070 3173 8.528643 AGGAAAATGTTATAAGGGTAACTTTGC 58.471 33.333 0.00 0.00 40.64 3.68
3073 3176 8.528643 GCAAGGAAAATGTTATAAGGGTAACTT 58.471 33.333 0.00 0.00 43.28 2.66
3074 3177 7.148137 CGCAAGGAAAATGTTATAAGGGTAACT 60.148 37.037 0.00 0.00 35.94 2.24
3075 3178 6.970613 CGCAAGGAAAATGTTATAAGGGTAAC 59.029 38.462 0.00 0.00 35.60 2.50
3262 3370 7.441157 TCAAACTGTAGACAGACTAACAATTGG 59.559 37.037 16.44 0.00 46.59 3.16
3305 3413 6.934645 TCGTCATTTCTTAATTTCTCACTGGT 59.065 34.615 0.00 0.00 0.00 4.00
3326 3434 8.511465 TCTAATTACTATGCCGTTTATTCGTC 57.489 34.615 0.00 0.00 0.00 4.20
3336 3444 6.970043 GCTGACTCTATCTAATTACTATGCCG 59.030 42.308 0.00 0.00 0.00 5.69
3386 3494 4.561735 GCCTACAGCAAACAAGTGTTAA 57.438 40.909 0.00 0.00 42.97 2.01
3411 3519 9.970553 TGAACTGATAGAAGACCTAAACTAGTA 57.029 33.333 0.00 0.00 0.00 1.82
3442 3550 2.575735 TCAGGGTATGCACTTCCAATCA 59.424 45.455 0.00 0.00 0.00 2.57
3567 3800 7.841222 AGGAACATAGCCCTTCAATAGAAAATT 59.159 33.333 0.00 0.00 32.35 1.82
3572 3805 5.975988 AAGGAACATAGCCCTTCAATAGA 57.024 39.130 0.00 0.00 38.31 1.98
3598 3831 7.280205 GTCTAGAAACTGGTCAAAAAGAGTTCA 59.720 37.037 0.00 0.00 0.00 3.18
3613 3847 6.128336 CCAGCAAAGATGAAGTCTAGAAACTG 60.128 42.308 0.00 0.00 35.67 3.16
3637 3871 3.334583 TGGAGTACAAATGCTCTGACC 57.665 47.619 0.00 0.00 37.68 4.02
3649 3883 7.822334 CACTGGACTTTAACATATTGGAGTACA 59.178 37.037 0.00 0.00 0.00 2.90
3702 3936 1.671979 CTGTGTGCATGGACCCATAG 58.328 55.000 15.34 1.10 34.91 2.23
3703 3937 0.394216 GCTGTGTGCATGGACCCATA 60.394 55.000 15.34 0.00 42.31 2.74
3704 3938 1.679977 GCTGTGTGCATGGACCCAT 60.680 57.895 15.34 0.00 42.31 4.00
3705 3939 1.487850 TAGCTGTGTGCATGGACCCA 61.488 55.000 15.34 8.73 45.94 4.51
3706 3940 0.107017 ATAGCTGTGTGCATGGACCC 60.107 55.000 15.34 3.52 45.94 4.46
3707 3941 1.019673 CATAGCTGTGTGCATGGACC 58.980 55.000 15.34 6.88 45.94 4.46
3708 3942 1.019673 CCATAGCTGTGTGCATGGAC 58.980 55.000 10.90 10.90 45.06 4.02
3709 3943 0.107066 CCCATAGCTGTGTGCATGGA 60.107 55.000 11.78 0.00 45.06 3.41
3710 3944 0.394762 ACCCATAGCTGTGTGCATGG 60.395 55.000 9.80 6.83 45.94 3.66
3711 3945 1.019673 GACCCATAGCTGTGTGCATG 58.980 55.000 9.80 0.00 45.94 4.06
3712 3946 0.107017 GGACCCATAGCTGTGTGCAT 60.107 55.000 9.80 0.00 45.94 3.96
3713 3947 1.299648 GGACCCATAGCTGTGTGCA 59.700 57.895 9.80 0.00 45.94 4.57
3714 3948 0.107017 ATGGACCCATAGCTGTGTGC 60.107 55.000 9.80 0.00 43.29 4.57
3715 3949 1.671979 CATGGACCCATAGCTGTGTG 58.328 55.000 9.80 0.00 34.91 3.82
3716 3950 0.107017 GCATGGACCCATAGCTGTGT 60.107 55.000 9.80 0.00 34.91 3.72
3717 3951 0.107066 TGCATGGACCCATAGCTGTG 60.107 55.000 17.69 2.99 34.91 3.66
3718 3952 0.107017 GTGCATGGACCCATAGCTGT 60.107 55.000 5.98 0.00 34.91 4.40
3719 3953 0.107066 TGTGCATGGACCCATAGCTG 60.107 55.000 15.34 4.66 34.91 4.24
3720 3954 0.107017 GTGTGCATGGACCCATAGCT 60.107 55.000 15.34 0.00 34.91 3.32
3721 3955 0.394216 TGTGTGCATGGACCCATAGC 60.394 55.000 15.34 8.47 34.91 2.97
3722 3956 2.353357 ATGTGTGCATGGACCCATAG 57.647 50.000 13.37 0.00 34.91 2.23
3830 4064 7.652105 CACACTAAAAGTCTAAAGTGACTAGCA 59.348 37.037 13.33 0.00 45.49 3.49
3888 4122 3.817084 CCATGTGGCTCATATGGTTACAG 59.183 47.826 17.28 0.00 44.49 2.74
3911 4145 1.168714 GACTAGTTTTGCAGCCTGGG 58.831 55.000 0.00 0.00 0.00 4.45
4000 4234 8.900781 CACTTTCAGGAATCAATTACATCAGAT 58.099 33.333 0.00 0.00 0.00 2.90
4199 4435 5.063180 ACACACAACTGAATGGCATATTG 57.937 39.130 0.00 6.30 0.00 1.90
4306 4542 3.437395 TCAAATATGCTTTACGCGGTTGT 59.563 39.130 12.47 0.00 43.27 3.32
4506 4742 6.322201 AGTCCAACTCAATCATTTTTGTCTGT 59.678 34.615 0.00 0.00 0.00 3.41
4775 5011 4.345859 ACCTAAGTTTCCAATGTCGTCA 57.654 40.909 0.00 0.00 0.00 4.35
4783 5019 4.139038 GCCAGTGTTACCTAAGTTTCCAA 58.861 43.478 0.00 0.00 0.00 3.53
4822 5058 7.693951 GGTGTTCGAGAGATCATATTTGTTTTG 59.306 37.037 0.00 0.00 41.39 2.44
4998 5234 8.786826 AGTCATCATATCTAGAGTGCTACTAC 57.213 38.462 0.00 0.00 0.00 2.73
5412 5648 4.340381 AGGTGATATTTCAGGCATTTCAGC 59.660 41.667 0.00 0.00 33.06 4.26
5787 6023 4.759693 CACTAACTTGGATTGTTAGCCACA 59.240 41.667 11.95 0.00 46.28 4.17
5803 6039 7.038231 AGCCTTTACCTACTTGATTCACTAACT 60.038 37.037 0.00 0.00 0.00 2.24
5814 6050 7.865706 ATCATTGTTAGCCTTTACCTACTTG 57.134 36.000 0.00 0.00 0.00 3.16
5815 6051 8.989131 TCTATCATTGTTAGCCTTTACCTACTT 58.011 33.333 0.00 0.00 0.00 2.24
5863 6099 6.387465 CATCAAATCCCATTAGTGATCATGC 58.613 40.000 0.00 0.00 0.00 4.06
5995 6232 3.053991 CACCACACCAGGGTTCCAATATA 60.054 47.826 0.00 0.00 36.19 0.86
6008 6245 2.093711 CCATAAGATCGACACCACACCA 60.094 50.000 0.00 0.00 0.00 4.17
6089 6330 2.738587 ACACCACCACCACAACAATA 57.261 45.000 0.00 0.00 0.00 1.90
6090 6331 2.738587 TACACCACCACCACAACAAT 57.261 45.000 0.00 0.00 0.00 2.71
6160 6401 5.977635 TGGTTGTCGATCAATACATCTTCT 58.022 37.500 0.00 0.00 38.38 2.85
6394 6638 2.127708 GGCCTCCTCCCATTTCTCTTA 58.872 52.381 0.00 0.00 0.00 2.10
6472 6716 2.346847 CGATTTCCTCTTCTTGCGAGTG 59.653 50.000 0.00 0.00 0.00 3.51
6478 6722 5.111989 TGCATCTACGATTTCCTCTTCTTG 58.888 41.667 0.00 0.00 0.00 3.02
6505 6749 0.389391 AGGGTGTGTTCACTGAGACG 59.611 55.000 4.59 0.00 43.41 4.18
6551 6795 5.237996 CAGTTGCCGTCATCATCATCTAATT 59.762 40.000 0.00 0.00 0.00 1.40
6594 6844 7.679783 TGTCATCAGTCAGATAGAAGGAAAAA 58.320 34.615 0.00 0.00 34.43 1.94
6747 7001 5.521010 CACTGTAACAACCAAAGTTCGACTA 59.479 40.000 0.00 0.00 32.45 2.59
6890 7181 7.773224 TGAAAGTTTTCCATTAGTCTGAACTCA 59.227 33.333 2.41 0.00 35.31 3.41
6926 7217 9.178758 GGGATTTTCTTCATTACAAGTAGTCAT 57.821 33.333 0.00 0.00 0.00 3.06
6927 7218 8.160765 TGGGATTTTCTTCATTACAAGTAGTCA 58.839 33.333 0.00 0.00 0.00 3.41
6928 7219 8.561738 TGGGATTTTCTTCATTACAAGTAGTC 57.438 34.615 0.00 0.00 0.00 2.59
6929 7220 9.178758 GATGGGATTTTCTTCATTACAAGTAGT 57.821 33.333 0.00 0.00 0.00 2.73
6930 7221 8.624776 GGATGGGATTTTCTTCATTACAAGTAG 58.375 37.037 0.00 0.00 0.00 2.57
6931 7222 8.112822 TGGATGGGATTTTCTTCATTACAAGTA 58.887 33.333 0.00 0.00 0.00 2.24
6932 7223 6.953520 TGGATGGGATTTTCTTCATTACAAGT 59.046 34.615 0.00 0.00 0.00 3.16
6933 7224 7.260603 GTGGATGGGATTTTCTTCATTACAAG 58.739 38.462 0.00 0.00 0.00 3.16
6934 7225 6.154363 GGTGGATGGGATTTTCTTCATTACAA 59.846 38.462 0.00 0.00 0.00 2.41
6935 7226 5.656416 GGTGGATGGGATTTTCTTCATTACA 59.344 40.000 0.00 0.00 0.00 2.41
6936 7227 5.893824 AGGTGGATGGGATTTTCTTCATTAC 59.106 40.000 0.00 0.00 0.00 1.89
6937 7228 5.893255 CAGGTGGATGGGATTTTCTTCATTA 59.107 40.000 0.00 0.00 0.00 1.90
6939 7230 4.264532 ACAGGTGGATGGGATTTTCTTCAT 60.265 41.667 0.00 0.00 0.00 2.57
6940 7231 3.075882 ACAGGTGGATGGGATTTTCTTCA 59.924 43.478 0.00 0.00 0.00 3.02
6941 7232 3.701664 ACAGGTGGATGGGATTTTCTTC 58.298 45.455 0.00 0.00 0.00 2.87
6942 7233 3.833559 ACAGGTGGATGGGATTTTCTT 57.166 42.857 0.00 0.00 0.00 2.52
6943 7234 3.370527 CGTACAGGTGGATGGGATTTTCT 60.371 47.826 0.00 0.00 0.00 2.52
6944 7235 2.943033 CGTACAGGTGGATGGGATTTTC 59.057 50.000 0.00 0.00 0.00 2.29
6945 7236 2.574369 TCGTACAGGTGGATGGGATTTT 59.426 45.455 0.00 0.00 0.00 1.82
6946 7237 2.193127 TCGTACAGGTGGATGGGATTT 58.807 47.619 0.00 0.00 0.00 2.17
6947 7238 1.874129 TCGTACAGGTGGATGGGATT 58.126 50.000 0.00 0.00 0.00 3.01
6949 7240 1.484653 CAATCGTACAGGTGGATGGGA 59.515 52.381 0.00 0.00 0.00 4.37
6950 7241 1.484653 TCAATCGTACAGGTGGATGGG 59.515 52.381 0.00 0.00 0.00 4.00
6951 7242 2.936498 GTTCAATCGTACAGGTGGATGG 59.064 50.000 0.00 0.00 0.00 3.51
6953 7244 2.232941 ACGTTCAATCGTACAGGTGGAT 59.767 45.455 0.00 0.00 42.35 3.41
6954 7245 1.614903 ACGTTCAATCGTACAGGTGGA 59.385 47.619 0.00 0.00 42.35 4.02
6955 7246 1.724623 CACGTTCAATCGTACAGGTGG 59.275 52.381 0.00 0.00 42.27 4.61
6956 7247 1.126113 GCACGTTCAATCGTACAGGTG 59.874 52.381 0.00 0.00 42.27 4.00
6958 7249 1.710013 AGCACGTTCAATCGTACAGG 58.290 50.000 0.00 0.00 42.27 4.00
6960 7251 3.021269 AGAAGCACGTTCAATCGTACA 57.979 42.857 0.00 0.00 42.27 2.90
6961 7252 5.697848 ATTAGAAGCACGTTCAATCGTAC 57.302 39.130 0.00 0.00 42.27 3.67
6964 7255 5.203358 TGAATTAGAAGCACGTTCAATCG 57.797 39.130 0.00 0.00 37.67 3.34
6965 7256 6.546395 ACATGAATTAGAAGCACGTTCAATC 58.454 36.000 0.00 0.00 37.67 2.67
6967 7258 5.940192 ACATGAATTAGAAGCACGTTCAA 57.060 34.783 0.00 0.00 37.67 2.69
6969 7260 5.689819 ACAACATGAATTAGAAGCACGTTC 58.310 37.500 0.00 0.00 35.08 3.95
6970 7261 5.689383 ACAACATGAATTAGAAGCACGTT 57.311 34.783 0.00 0.00 0.00 3.99
6972 7263 6.088085 GGAAAACAACATGAATTAGAAGCACG 59.912 38.462 0.00 0.00 0.00 5.34
6973 7264 6.366061 GGGAAAACAACATGAATTAGAAGCAC 59.634 38.462 0.00 0.00 0.00 4.40
6976 7267 7.661040 ACAGGGAAAACAACATGAATTAGAAG 58.339 34.615 0.00 0.00 0.00 2.85
6977 7268 7.595819 ACAGGGAAAACAACATGAATTAGAA 57.404 32.000 0.00 0.00 0.00 2.10
6979 7270 7.384932 GGAAACAGGGAAAACAACATGAATTAG 59.615 37.037 0.00 0.00 0.00 1.73
6980 7271 7.147655 TGGAAACAGGGAAAACAACATGAATTA 60.148 33.333 0.00 0.00 35.01 1.40
6981 7272 6.054941 GGAAACAGGGAAAACAACATGAATT 58.945 36.000 0.00 0.00 0.00 2.17
6982 7273 5.130145 TGGAAACAGGGAAAACAACATGAAT 59.870 36.000 0.00 0.00 35.01 2.57
6983 7274 4.467795 TGGAAACAGGGAAAACAACATGAA 59.532 37.500 0.00 0.00 35.01 2.57
6984 7275 4.026744 TGGAAACAGGGAAAACAACATGA 58.973 39.130 0.00 0.00 35.01 3.07
6985 7276 4.399004 TGGAAACAGGGAAAACAACATG 57.601 40.909 0.00 0.00 35.01 3.21
6986 7277 5.428184 TTTGGAAACAGGGAAAACAACAT 57.572 34.783 0.00 0.00 44.54 2.71
6989 7280 6.054860 TGAATTTGGAAACAGGGAAAACAA 57.945 33.333 0.00 0.00 44.54 2.83
6990 7281 5.683876 TGAATTTGGAAACAGGGAAAACA 57.316 34.783 0.00 0.00 44.54 2.83
6991 7282 6.202762 GTCATGAATTTGGAAACAGGGAAAAC 59.797 38.462 0.00 0.00 44.54 2.43
6993 7284 5.221621 GGTCATGAATTTGGAAACAGGGAAA 60.222 40.000 0.00 0.00 44.54 3.13
6994 7285 4.283212 GGTCATGAATTTGGAAACAGGGAA 59.717 41.667 0.00 0.00 44.54 3.97
6995 7286 3.831911 GGTCATGAATTTGGAAACAGGGA 59.168 43.478 0.00 0.00 44.54 4.20
6996 7287 3.577848 TGGTCATGAATTTGGAAACAGGG 59.422 43.478 0.00 0.00 44.54 4.45
6997 7288 4.813027 CTGGTCATGAATTTGGAAACAGG 58.187 43.478 0.00 0.00 44.54 4.00
6998 7289 4.240096 GCTGGTCATGAATTTGGAAACAG 58.760 43.478 0.00 0.00 44.54 3.16
6999 7290 3.640498 TGCTGGTCATGAATTTGGAAACA 59.360 39.130 0.00 0.00 39.83 2.83
7001 7292 3.306225 GCTGCTGGTCATGAATTTGGAAA 60.306 43.478 0.00 0.00 0.00 3.13
7002 7293 2.231964 GCTGCTGGTCATGAATTTGGAA 59.768 45.455 0.00 0.00 0.00 3.53
7003 7294 1.820519 GCTGCTGGTCATGAATTTGGA 59.179 47.619 0.00 0.00 0.00 3.53
7004 7295 1.546923 TGCTGCTGGTCATGAATTTGG 59.453 47.619 0.00 0.00 0.00 3.28
7005 7296 2.230508 ACTGCTGCTGGTCATGAATTTG 59.769 45.455 11.29 0.00 0.00 2.32
7007 7298 1.816835 CACTGCTGCTGGTCATGAATT 59.183 47.619 11.29 0.00 0.00 2.17
7008 7299 1.460504 CACTGCTGCTGGTCATGAAT 58.539 50.000 11.29 0.00 0.00 2.57
7009 7300 1.239296 GCACTGCTGCTGGTCATGAA 61.239 55.000 11.29 0.00 40.63 2.57
7010 7301 1.673337 GCACTGCTGCTGGTCATGA 60.673 57.895 11.29 0.00 40.63 3.07
7011 7302 2.875485 GCACTGCTGCTGGTCATG 59.125 61.111 11.29 1.48 40.63 3.07
7078 7369 1.532794 TTGGCCCGAGCACCAAATT 60.533 52.632 0.00 0.00 42.87 1.82
7081 7372 4.196778 TGTTGGCCCGAGCACCAA 62.197 61.111 0.00 0.00 43.59 3.67
7091 7408 3.365265 CGTTGCTCCCTGTTGGCC 61.365 66.667 0.00 0.00 0.00 5.36
7109 7426 5.790593 TGTATCCAAGTTCCTACAACACTC 58.209 41.667 0.00 0.00 0.00 3.51
7116 7433 4.159135 TCCGTTCTGTATCCAAGTTCCTAC 59.841 45.833 0.00 0.00 0.00 3.18
7129 7642 3.491639 CACGTTTTCATGTCCGTTCTGTA 59.508 43.478 0.00 0.00 0.00 2.74
7170 7683 1.144057 GCCGTACTGGACTGGATGG 59.856 63.158 7.77 0.00 42.00 3.51
7203 7716 1.493772 TGCAGTAGTGTCGTTTTCCG 58.506 50.000 0.00 0.00 38.13 4.30
7302 7818 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
7304 7820 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
7305 7821 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
7308 7824 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
7309 7825 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
7310 7826 3.495193 TCGAGACAAGTAATTCCGAACG 58.505 45.455 0.00 0.00 0.00 3.95
7311 7827 5.834239 TTTCGAGACAAGTAATTCCGAAC 57.166 39.130 0.00 0.00 34.86 3.95
7313 7829 5.350365 CCATTTTCGAGACAAGTAATTCCGA 59.650 40.000 0.00 0.00 0.00 4.55
7314 7830 5.350365 TCCATTTTCGAGACAAGTAATTCCG 59.650 40.000 0.00 0.00 0.00 4.30
7315 7831 6.737254 TCCATTTTCGAGACAAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
7316 7832 7.752695 ACATCCATTTTCGAGACAAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
7320 7836 7.782049 AGATACATCCATTTTCGAGACAAGTA 58.218 34.615 0.00 0.00 0.00 2.24
7321 7837 6.644347 AGATACATCCATTTTCGAGACAAGT 58.356 36.000 0.00 0.00 0.00 3.16
7322 7838 8.138074 TCTAGATACATCCATTTTCGAGACAAG 58.862 37.037 0.00 0.00 0.00 3.16
7323 7839 8.007405 TCTAGATACATCCATTTTCGAGACAA 57.993 34.615 0.00 0.00 0.00 3.18
7325 7841 8.138712 AGTTCTAGATACATCCATTTTCGAGAC 58.861 37.037 0.00 0.00 0.00 3.36
7326 7842 8.239038 AGTTCTAGATACATCCATTTTCGAGA 57.761 34.615 0.00 0.00 0.00 4.04
7327 7843 9.967346 TTAGTTCTAGATACATCCATTTTCGAG 57.033 33.333 0.00 0.00 0.00 4.04
7354 7870 8.861086 ACAGAAATGGATGTATCTAGACGTATT 58.139 33.333 0.00 0.00 0.00 1.89
7355 7871 8.300286 CACAGAAATGGATGTATCTAGACGTAT 58.700 37.037 0.00 0.00 0.00 3.06
7356 7872 7.501225 TCACAGAAATGGATGTATCTAGACGTA 59.499 37.037 0.00 0.00 0.00 3.57
7357 7873 6.321435 TCACAGAAATGGATGTATCTAGACGT 59.679 38.462 0.00 0.00 0.00 4.34
7358 7874 6.638873 GTCACAGAAATGGATGTATCTAGACG 59.361 42.308 0.00 0.00 0.00 4.18
7359 7875 7.492524 TGTCACAGAAATGGATGTATCTAGAC 58.507 38.462 0.00 0.00 31.82 2.59
7361 7877 7.984050 ACTTGTCACAGAAATGGATGTATCTAG 59.016 37.037 0.00 0.00 0.00 2.43
7362 7878 7.851228 ACTTGTCACAGAAATGGATGTATCTA 58.149 34.615 0.00 0.00 0.00 1.98
7363 7879 6.715280 ACTTGTCACAGAAATGGATGTATCT 58.285 36.000 0.00 0.00 0.00 1.98
7364 7880 6.992063 ACTTGTCACAGAAATGGATGTATC 57.008 37.500 0.00 0.00 0.00 2.24
7365 7881 9.466497 AATTACTTGTCACAGAAATGGATGTAT 57.534 29.630 0.00 0.00 0.00 2.29
7366 7882 8.862325 AATTACTTGTCACAGAAATGGATGTA 57.138 30.769 0.00 0.00 0.00 2.29
7368 7884 7.253422 GGAATTACTTGTCACAGAAATGGATG 58.747 38.462 0.00 0.00 0.00 3.51
7370 7886 5.411361 CGGAATTACTTGTCACAGAAATGGA 59.589 40.000 0.00 0.00 0.00 3.41
7371 7887 5.411361 TCGGAATTACTTGTCACAGAAATGG 59.589 40.000 0.00 0.00 0.00 3.16
7372 7888 6.480524 TCGGAATTACTTGTCACAGAAATG 57.519 37.500 0.00 0.00 0.00 2.32
7373 7889 6.485313 TGTTCGGAATTACTTGTCACAGAAAT 59.515 34.615 0.00 0.00 0.00 2.17
7376 7892 4.951254 TGTTCGGAATTACTTGTCACAGA 58.049 39.130 0.00 0.00 0.00 3.41
7377 7893 4.152402 CCTGTTCGGAATTACTTGTCACAG 59.848 45.833 0.00 0.00 33.16 3.66
7378 7894 4.062293 CCTGTTCGGAATTACTTGTCACA 58.938 43.478 0.00 0.00 33.16 3.58
7379 7895 3.435671 CCCTGTTCGGAATTACTTGTCAC 59.564 47.826 0.00 0.00 33.16 3.67
7380 7896 3.558321 CCCCTGTTCGGAATTACTTGTCA 60.558 47.826 0.00 0.00 33.16 3.58
7381 7897 3.007635 CCCCTGTTCGGAATTACTTGTC 58.992 50.000 0.00 0.00 33.16 3.18
7382 7898 2.640826 TCCCCTGTTCGGAATTACTTGT 59.359 45.455 0.00 0.00 33.16 3.16
7383 7899 3.270877 CTCCCCTGTTCGGAATTACTTG 58.729 50.000 0.00 0.00 33.16 3.16
7386 7902 3.736126 CGTACTCCCCTGTTCGGAATTAC 60.736 52.174 0.00 0.00 33.16 1.89
7388 7904 1.206371 CGTACTCCCCTGTTCGGAATT 59.794 52.381 0.00 0.00 33.16 2.17
7390 7906 0.540365 ACGTACTCCCCTGTTCGGAA 60.540 55.000 0.00 0.00 35.56 4.30
7391 7907 1.075482 ACGTACTCCCCTGTTCGGA 59.925 57.895 0.00 0.00 35.56 4.55
7393 7909 0.388134 CACACGTACTCCCCTGTTCG 60.388 60.000 0.00 0.00 36.91 3.95
7394 7910 0.677842 ACACACGTACTCCCCTGTTC 59.322 55.000 0.00 0.00 0.00 3.18
7395 7911 1.615392 GTACACACGTACTCCCCTGTT 59.385 52.381 0.00 0.00 43.97 3.16
7397 7913 1.250328 TGTACACACGTACTCCCCTG 58.750 55.000 0.00 0.00 46.88 4.45
7398 7914 1.891150 CTTGTACACACGTACTCCCCT 59.109 52.381 0.00 0.00 46.88 4.79
7399 7915 1.670967 GCTTGTACACACGTACTCCCC 60.671 57.143 0.00 0.00 46.88 4.81
7400 7916 1.271656 AGCTTGTACACACGTACTCCC 59.728 52.381 0.00 0.00 46.88 4.30
7402 7918 3.490399 GAGAGCTTGTACACACGTACTC 58.510 50.000 0.00 0.00 46.88 2.59
7403 7919 2.228343 GGAGAGCTTGTACACACGTACT 59.772 50.000 0.00 0.00 46.88 2.73
7404 7920 2.593257 GGAGAGCTTGTACACACGTAC 58.407 52.381 0.00 0.00 46.94 3.67
7407 7948 0.732880 CCGGAGAGCTTGTACACACG 60.733 60.000 0.00 0.00 0.00 4.49
7460 8001 0.450482 CCGCAGACGTTTAAAGCACG 60.450 55.000 0.00 0.00 43.52 5.34
7463 8004 0.863144 TGTCCGCAGACGTTTAAAGC 59.137 50.000 0.00 0.00 46.74 3.51
7475 8016 0.462225 TTTGACCGAAGTTGTCCGCA 60.462 50.000 0.00 0.00 31.60 5.69
7482 8023 4.231439 GTTGTTTGTGTTTGACCGAAGTT 58.769 39.130 0.00 0.00 0.00 2.66
7483 8024 3.668491 CGTTGTTTGTGTTTGACCGAAGT 60.668 43.478 0.00 0.00 0.00 3.01
7484 8025 2.843643 CGTTGTTTGTGTTTGACCGAAG 59.156 45.455 0.00 0.00 0.00 3.79
7486 8027 1.805345 ACGTTGTTTGTGTTTGACCGA 59.195 42.857 0.00 0.00 0.00 4.69
7493 8034 2.672760 GCCTTCCAACGTTGTTTGTGTT 60.673 45.455 25.63 0.00 0.00 3.32
7494 8035 1.135228 GCCTTCCAACGTTGTTTGTGT 60.135 47.619 25.63 0.00 0.00 3.72
7495 8036 1.134175 AGCCTTCCAACGTTGTTTGTG 59.866 47.619 25.63 10.97 0.00 3.33
7503 8046 0.472471 TTTGAGGAGCCTTCCAACGT 59.528 50.000 0.00 0.00 46.64 3.99
7511 8054 4.696479 AATCACGATATTTGAGGAGCCT 57.304 40.909 0.00 0.00 0.00 4.58
7527 8070 6.801539 TGAGGAATGAAGTTGTGTAATCAC 57.198 37.500 0.00 0.00 44.08 3.06
7560 8103 3.562557 TGATCGATGTGCATGGATTTGAG 59.437 43.478 0.54 0.00 36.58 3.02
7693 8244 6.449635 TTTATGAAGCATATGTGAACCCAC 57.550 37.500 4.29 0.00 43.46 4.61
7710 8261 7.463544 CACGCAACTACTCAATGATTTTATGA 58.536 34.615 0.00 0.00 0.00 2.15
7713 8264 5.180304 TGCACGCAACTACTCAATGATTTTA 59.820 36.000 0.00 0.00 0.00 1.52
7714 8265 4.023279 TGCACGCAACTACTCAATGATTTT 60.023 37.500 0.00 0.00 0.00 1.82
7716 8267 3.073678 TGCACGCAACTACTCAATGATT 58.926 40.909 0.00 0.00 0.00 2.57
7725 8276 1.342555 TATCACGTGCACGCAACTAC 58.657 50.000 37.35 0.00 44.43 2.73
7753 8306 5.628134 ACTTTCTGAAAAAGTGTCGACAAC 58.372 37.500 21.95 14.41 38.88 3.32
7761 8314 8.482429 GCATATTGTGAACTTTCTGAAAAAGTG 58.518 33.333 4.18 0.00 40.10 3.16
7762 8315 8.416329 AGCATATTGTGAACTTTCTGAAAAAGT 58.584 29.630 4.18 0.00 41.82 2.66
7764 8317 8.632679 AGAGCATATTGTGAACTTTCTGAAAAA 58.367 29.630 4.18 0.00 0.00 1.94
7769 8322 5.106436 TGCAGAGCATATTGTGAACTTTCTG 60.106 40.000 0.00 0.00 31.71 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.