Multiple sequence alignment - TraesCS1D01G225500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G225500 chr1D 100.000 3667 0 0 718 4384 314012352 314016018 0.000000e+00 6772.0
1 TraesCS1D01G225500 chr1D 100.000 530 0 0 1 530 314011635 314012164 0.000000e+00 979.0
2 TraesCS1D01G225500 chr1B 93.258 1943 70 26 719 2628 424082591 424084505 0.000000e+00 2806.0
3 TraesCS1D01G225500 chr1B 92.402 895 50 6 2787 3681 424084504 424085380 0.000000e+00 1260.0
4 TraesCS1D01G225500 chr1B 85.110 544 33 11 1 523 424081647 424082163 3.020000e-141 512.0
5 TraesCS1D01G225500 chr1B 85.309 388 32 17 3674 4046 424085459 424085836 1.150000e-100 377.0
6 TraesCS1D01G225500 chr1B 97.500 40 1 0 2361 2400 424083506 424083467 7.870000e-08 69.4
7 TraesCS1D01G225500 chr1A 89.337 1191 67 29 719 1899 394319646 394320786 0.000000e+00 1441.0
8 TraesCS1D01G225500 chr1A 91.996 987 44 20 2787 3749 394321356 394322331 0.000000e+00 1352.0
9 TraesCS1D01G225500 chr1A 89.655 580 39 12 2054 2628 394320794 394321357 0.000000e+00 719.0
10 TraesCS1D01G225500 chr1A 86.788 386 35 9 1 385 394306789 394307159 2.440000e-112 416.0
11 TraesCS1D01G225500 chr1A 98.214 112 2 0 419 530 394319414 394319525 3.460000e-46 196.0
12 TraesCS1D01G225500 chr1A 92.308 39 3 0 2361 2399 394320540 394320502 6.130000e-04 56.5
13 TraesCS1D01G225500 chr5A 85.161 620 73 11 973 1585 670272455 670271848 6.230000e-173 617.0
14 TraesCS1D01G225500 chr5A 87.755 245 16 5 4046 4277 706672182 706671939 1.550000e-69 274.0
15 TraesCS1D01G225500 chr5A 94.479 163 9 0 2627 2789 320214244 320214406 7.280000e-63 252.0
16 TraesCS1D01G225500 chr5A 72.952 525 90 29 2788 3278 670268438 670267932 7.650000e-28 135.0
17 TraesCS1D01G225500 chr4B 82.986 623 80 13 973 1585 625225589 625224983 1.390000e-149 540.0
18 TraesCS1D01G225500 chr4B 92.405 158 9 3 1902 2058 106227561 106227406 5.710000e-54 222.0
19 TraesCS1D01G225500 chr4D 81.862 623 79 16 973 1585 488507193 488506595 1.100000e-135 494.0
20 TraesCS1D01G225500 chr4D 84.553 369 52 4 2229 2593 488506156 488505789 1.160000e-95 361.0
21 TraesCS1D01G225500 chr4D 94.444 162 9 0 2627 2788 34661688 34661527 2.620000e-62 250.0
22 TraesCS1D01G225500 chr4D 92.453 159 10 2 1902 2059 74079504 74079347 4.410000e-55 226.0
23 TraesCS1D01G225500 chr4D 93.913 115 5 2 4270 4384 378289237 378289349 5.830000e-39 172.0
24 TraesCS1D01G225500 chr7A 88.259 247 16 4 4044 4277 715926053 715926299 2.580000e-72 283.0
25 TraesCS1D01G225500 chr7A 93.913 115 7 0 4270 4384 715926319 715926433 1.620000e-39 174.0
26 TraesCS1D01G225500 chr7D 91.089 202 14 3 4070 4269 604426833 604427032 2.010000e-68 270.0
27 TraesCS1D01G225500 chr7D 94.479 163 9 0 2627 2789 454079247 454079409 7.280000e-63 252.0
28 TraesCS1D01G225500 chr7D 93.162 117 6 1 4270 4384 604427063 604427179 2.100000e-38 171.0
29 TraesCS1D01G225500 chr7B 94.444 162 9 0 2627 2788 490208151 490207990 2.620000e-62 250.0
30 TraesCS1D01G225500 chr7B 92.442 172 11 2 2619 2789 382331922 382332092 1.220000e-60 244.0
31 TraesCS1D01G225500 chr6A 81.288 326 45 13 4070 4384 25770206 25769886 2.620000e-62 250.0
32 TraesCS1D01G225500 chr6A 89.595 173 15 2 1895 2066 366029452 366029622 2.660000e-52 217.0
33 TraesCS1D01G225500 chr2B 94.444 162 9 0 2627 2788 608226886 608226725 2.620000e-62 250.0
34 TraesCS1D01G225500 chr5D 92.941 170 12 0 2620 2789 529218334 529218165 9.420000e-62 248.0
35 TraesCS1D01G225500 chr4A 93.333 165 11 0 2627 2791 137967140 137966976 1.220000e-60 244.0
36 TraesCS1D01G225500 chr4A 93.827 162 10 0 2627 2788 137972669 137972830 1.220000e-60 244.0
37 TraesCS1D01G225500 chr5B 87.317 205 16 2 4044 4238 90179525 90179729 4.410000e-55 226.0
38 TraesCS1D01G225500 chr5B 91.304 115 9 1 4270 4384 249577951 249578064 5.870000e-34 156.0
39 TraesCS1D01G225500 chr3D 92.405 158 9 3 1902 2058 322435444 322435289 5.710000e-54 222.0
40 TraesCS1D01G225500 chr3D 88.398 181 17 4 1877 2055 288550433 288550611 9.550000e-52 215.0
41 TraesCS1D01G225500 chr3D 87.302 63 4 3 419 480 533921492 533921551 7.870000e-08 69.4
42 TraesCS1D01G225500 chr6B 91.411 163 10 4 1898 2058 617176578 617176738 2.050000e-53 220.0
43 TraesCS1D01G225500 chr3B 89.655 174 15 2 1886 2056 328715616 328715443 7.380000e-53 219.0
44 TraesCS1D01G225500 chr2D 89.881 168 15 2 1893 2059 58651693 58651859 9.550000e-52 215.0
45 TraesCS1D01G225500 chr6D 88.462 130 6 2 4039 4159 2245507 2245378 9.820000e-32 148.0
46 TraesCS1D01G225500 chr2A 83.478 115 5 9 4270 4384 631849157 631849257 1.300000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G225500 chr1D 314011635 314016018 4383 False 3875.50 6772 100.00000 1 4384 2 chr1D.!!$F1 4383
1 TraesCS1D01G225500 chr1B 424081647 424085836 4189 False 1238.75 2806 89.01975 1 4046 4 chr1B.!!$F1 4045
2 TraesCS1D01G225500 chr1A 394319414 394322331 2917 False 927.00 1441 92.30050 419 3749 4 chr1A.!!$F2 3330
3 TraesCS1D01G225500 chr5A 670267932 670272455 4523 True 376.00 617 79.05650 973 3278 2 chr5A.!!$R2 2305
4 TraesCS1D01G225500 chr4B 625224983 625225589 606 True 540.00 540 82.98600 973 1585 1 chr4B.!!$R2 612
5 TraesCS1D01G225500 chr4D 488505789 488507193 1404 True 427.50 494 83.20750 973 2593 2 chr4D.!!$R3 1620

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
340 342 0.388649 TCTCTTTCTTCTGCGACGGC 60.389 55.0 0.00 0.0 40.52 5.68 F
1846 3103 0.035458 CAGAGGAAGGCGGAACAGTT 59.965 55.0 0.00 0.0 0.00 3.16 F
2617 5477 0.318107 GTTTGCAAGCAGTCGCATGT 60.318 50.0 8.58 0.0 39.07 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2125 4855 1.656652 ATGACCTATCAGCGTTGTGC 58.343 50.0 0.00 0.0 46.98 4.57 R
2780 5640 0.035881 CGCCATGCATGATACTCCCT 59.964 55.0 28.31 0.0 0.00 4.20 R
4231 7253 0.041926 GCGTCGTTAGTTTGCGGTTT 60.042 50.0 0.00 0.0 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 1.385528 TCGCGAGCCATGTTAGTCTA 58.614 50.000 3.71 0.00 0.00 2.59
63 64 9.561069 AGCCATGTTAGTCTAAATAAAGTATGG 57.439 33.333 0.00 0.00 34.73 2.74
95 96 8.768019 ACGTTAATAGGTTCAAGTTACAGTTTC 58.232 33.333 0.00 0.00 0.00 2.78
99 100 5.500645 AGGTTCAAGTTACAGTTTCAAGC 57.499 39.130 0.00 0.00 0.00 4.01
100 101 5.193679 AGGTTCAAGTTACAGTTTCAAGCT 58.806 37.500 0.00 0.00 0.00 3.74
101 102 5.652452 AGGTTCAAGTTACAGTTTCAAGCTT 59.348 36.000 0.00 0.00 0.00 3.74
102 103 5.971792 GGTTCAAGTTACAGTTTCAAGCTTC 59.028 40.000 0.00 0.00 0.00 3.86
103 104 6.404293 GGTTCAAGTTACAGTTTCAAGCTTCA 60.404 38.462 0.00 0.00 0.00 3.02
104 105 6.942532 TCAAGTTACAGTTTCAAGCTTCAT 57.057 33.333 0.00 0.00 0.00 2.57
105 106 6.959361 TCAAGTTACAGTTTCAAGCTTCATC 58.041 36.000 0.00 0.00 0.00 2.92
106 107 6.542005 TCAAGTTACAGTTTCAAGCTTCATCA 59.458 34.615 0.00 0.00 0.00 3.07
107 108 7.229306 TCAAGTTACAGTTTCAAGCTTCATCAT 59.771 33.333 0.00 0.00 0.00 2.45
117 118 8.857216 GTTTCAAGCTTCATCATGAAAGTATTG 58.143 33.333 8.83 9.54 41.08 1.90
121 122 7.317842 AGCTTCATCATGAAAGTATTGAGTG 57.682 36.000 0.00 0.00 35.73 3.51
122 123 6.883217 AGCTTCATCATGAAAGTATTGAGTGT 59.117 34.615 0.00 0.00 35.73 3.55
123 124 6.965500 GCTTCATCATGAAAGTATTGAGTGTG 59.035 38.462 0.00 0.00 35.73 3.82
124 125 6.426980 TCATCATGAAAGTATTGAGTGTGC 57.573 37.500 0.00 0.00 0.00 4.57
132 133 7.047271 TGAAAGTATTGAGTGTGCATAGCATA 58.953 34.615 0.00 0.00 41.91 3.14
162 163 4.027458 CGATAATGCCAAAAACGAAGCATG 60.027 41.667 0.00 0.00 44.87 4.06
163 164 2.818130 ATGCCAAAAACGAAGCATGT 57.182 40.000 0.00 0.00 43.99 3.21
164 165 3.932545 ATGCCAAAAACGAAGCATGTA 57.067 38.095 0.00 0.00 43.99 2.29
166 167 4.250116 TGCCAAAAACGAAGCATGTAAT 57.750 36.364 0.00 0.00 0.00 1.89
176 177 7.391148 AACGAAGCATGTAATAATCTTTGGT 57.609 32.000 0.00 0.00 0.00 3.67
232 233 1.402968 CAGGCAGTGTCCACAATATGC 59.597 52.381 0.00 0.91 33.77 3.14
266 267 0.535780 TTGCAGGTTCAGCCACTCTG 60.536 55.000 0.00 0.00 44.21 3.35
301 302 1.118965 TGAGGTGAGGCCGTTCTCAA 61.119 55.000 15.28 3.80 44.30 3.02
308 310 3.804873 GTGAGGCCGTTCTCAAGATATTC 59.195 47.826 0.00 0.00 44.30 1.75
321 323 8.868522 TCTCAAGATATTCTGAAACACCAAAT 57.131 30.769 0.00 0.00 0.00 2.32
329 331 7.830099 ATTCTGAAACACCAAATCTCTTTCT 57.170 32.000 0.00 0.00 0.00 2.52
331 333 7.264373 TCTGAAACACCAAATCTCTTTCTTC 57.736 36.000 0.00 0.00 0.00 2.87
336 338 3.748048 CACCAAATCTCTTTCTTCTGCGA 59.252 43.478 0.00 0.00 0.00 5.10
337 339 3.748568 ACCAAATCTCTTTCTTCTGCGAC 59.251 43.478 0.00 0.00 0.00 5.19
338 340 3.181526 CCAAATCTCTTTCTTCTGCGACG 60.182 47.826 0.00 0.00 0.00 5.12
339 341 2.285827 ATCTCTTTCTTCTGCGACGG 57.714 50.000 0.00 0.00 0.00 4.79
340 342 0.388649 TCTCTTTCTTCTGCGACGGC 60.389 55.000 0.00 0.00 40.52 5.68
350 352 4.933483 GCGACGGCAAATCAAACA 57.067 50.000 0.00 0.00 39.62 2.83
351 353 2.420097 GCGACGGCAAATCAAACAC 58.580 52.632 0.00 0.00 39.62 3.32
352 354 1.001745 GCGACGGCAAATCAAACACC 61.002 55.000 0.00 0.00 39.62 4.16
377 379 1.399440 CAAACCAGTGGATGCTCATCG 59.601 52.381 18.40 0.00 38.69 3.84
404 406 5.220796 CCACACTCAATATCACATCTTGCAG 60.221 44.000 0.00 0.00 0.00 4.41
475 496 4.241681 CAGGTAGCTTCTGAACTCTGAAC 58.758 47.826 10.22 0.00 34.36 3.18
753 1008 4.070552 GCTCGTCCCGCTCAGGTT 62.071 66.667 0.00 0.00 38.74 3.50
803 1058 4.697756 TCTGGGGTTTGGCTCGCG 62.698 66.667 0.00 0.00 0.00 5.87
809 1064 4.736631 GTTTGGCTCGCGGCGTTC 62.737 66.667 22.90 14.36 42.94 3.95
810 1065 4.980805 TTTGGCTCGCGGCGTTCT 62.981 61.111 22.90 0.00 42.94 3.01
811 1066 3.576932 TTTGGCTCGCGGCGTTCTA 62.577 57.895 22.90 10.17 42.94 2.10
812 1067 3.982372 TTGGCTCGCGGCGTTCTAG 62.982 63.158 22.90 13.17 42.94 2.43
873 1128 4.521062 CCGCAGAAGGAGCCTCGG 62.521 72.222 0.74 0.74 0.00 4.63
902 1165 3.740397 CACCCTCGGCGTCGTGTA 61.740 66.667 10.18 0.00 37.69 2.90
908 1171 2.803670 CGGCGTCGTGTACACCTG 60.804 66.667 20.11 10.90 0.00 4.00
912 1175 1.886861 GCGTCGTGTACACCTGCTTG 61.887 60.000 20.11 5.25 0.00 4.01
915 1178 2.667318 CGTGTACACCTGCTTGCCG 61.667 63.158 20.11 1.33 0.00 5.69
923 1186 1.296715 CCTGCTTGCCGAACTACCT 59.703 57.895 0.00 0.00 0.00 3.08
942 1205 3.052620 GAGCAGCGCCTCGTAGTCA 62.053 63.158 2.29 0.00 0.00 3.41
949 1212 1.080705 GCCTCGTAGTCACACGCTT 60.081 57.895 0.00 0.00 41.67 4.68
963 1226 2.899339 GCTTCCGCATCTGAGGGC 60.899 66.667 0.00 0.00 35.57 5.19
1026 1292 4.851252 ATGGGGCAGGAGGGGGAG 62.851 72.222 0.00 0.00 0.00 4.30
1487 1759 1.274167 TGCTTCGACTCCGGTAATGTT 59.726 47.619 0.00 0.00 36.24 2.71
1617 1897 1.344763 AGCTAGTTCTTCAACCGTGCT 59.655 47.619 0.00 0.00 32.22 4.40
1695 2278 2.294791 TGGTTTTGTAATCAGTTGCCCG 59.705 45.455 0.00 0.00 0.00 6.13
1846 3103 0.035458 CAGAGGAAGGCGGAACAGTT 59.965 55.000 0.00 0.00 0.00 3.16
1962 3771 3.442625 TCAGTTGGACTACATACGGACTG 59.557 47.826 0.00 0.00 35.73 3.51
2076 4806 5.241403 ACTTTCATACTGTGGGTGATGAA 57.759 39.130 0.10 0.10 36.71 2.57
2125 4855 2.015736 ACAGAGTAATCCTTGCTGCG 57.984 50.000 0.00 0.00 0.00 5.18
2131 4861 0.521291 TAATCCTTGCTGCGCACAAC 59.479 50.000 5.66 0.00 38.71 3.32
2201 5042 8.143835 AGGAGATTTGTTGATTTGTACCTTTTG 58.856 33.333 0.00 0.00 0.00 2.44
2319 5160 4.041198 ACGGACAAGGGTAAGATCTTGAAA 59.959 41.667 18.47 0.00 41.94 2.69
2334 5175 4.867086 TCTTGAAAGTTTCTTGGGAAGGT 58.133 39.130 16.33 0.00 32.61 3.50
2391 5232 4.265073 AGATCTTTAAGCAATTCGGCACT 58.735 39.130 0.00 0.00 35.83 4.40
2446 5287 3.439857 AGAGCAAGGGTTCAGCAATTA 57.560 42.857 0.00 0.00 0.00 1.40
2562 5407 9.151471 TGTAGATCTTGAACTAGCACATAAAAC 57.849 33.333 0.00 0.00 0.00 2.43
2581 5426 3.176552 ACTGAGCTCATTTCAGATCCG 57.823 47.619 18.63 3.69 43.75 4.18
2593 5438 5.854010 TTTCAGATCCGCTACAAGATAGT 57.146 39.130 0.00 0.00 0.00 2.12
2594 5439 6.954487 TTTCAGATCCGCTACAAGATAGTA 57.046 37.500 0.00 0.00 0.00 1.82
2595 5440 6.561737 TTCAGATCCGCTACAAGATAGTAG 57.438 41.667 0.00 0.00 43.39 2.57
2609 5454 4.764172 AGATAGTAGGAGTTTGCAAGCAG 58.236 43.478 16.04 0.00 0.00 4.24
2617 5477 0.318107 GTTTGCAAGCAGTCGCATGT 60.318 50.000 8.58 0.00 39.07 3.21
2627 5487 4.503910 AGCAGTCGCATGTCTATGTTTTA 58.496 39.130 0.00 0.00 42.27 1.52
2628 5488 4.330074 AGCAGTCGCATGTCTATGTTTTAC 59.670 41.667 0.00 0.00 42.27 2.01
2629 5489 4.330074 GCAGTCGCATGTCTATGTTTTACT 59.670 41.667 0.00 0.00 38.36 2.24
2630 5490 5.500931 GCAGTCGCATGTCTATGTTTTACTC 60.501 44.000 0.00 0.00 38.36 2.59
2631 5491 5.005779 CAGTCGCATGTCTATGTTTTACTCC 59.994 44.000 0.00 0.00 36.65 3.85
2632 5492 4.270325 GTCGCATGTCTATGTTTTACTCCC 59.730 45.833 0.00 0.00 36.65 4.30
2633 5493 4.161565 TCGCATGTCTATGTTTTACTCCCT 59.838 41.667 0.00 0.00 36.65 4.20
2634 5494 4.508124 CGCATGTCTATGTTTTACTCCCTC 59.492 45.833 0.00 0.00 36.65 4.30
2635 5495 4.816925 GCATGTCTATGTTTTACTCCCTCC 59.183 45.833 0.00 0.00 36.65 4.30
2636 5496 4.730949 TGTCTATGTTTTACTCCCTCCG 57.269 45.455 0.00 0.00 0.00 4.63
2637 5497 4.091549 TGTCTATGTTTTACTCCCTCCGT 58.908 43.478 0.00 0.00 0.00 4.69
2638 5498 4.529377 TGTCTATGTTTTACTCCCTCCGTT 59.471 41.667 0.00 0.00 0.00 4.44
2639 5499 5.107824 GTCTATGTTTTACTCCCTCCGTTC 58.892 45.833 0.00 0.00 0.00 3.95
2640 5500 2.845363 TGTTTTACTCCCTCCGTTCC 57.155 50.000 0.00 0.00 0.00 3.62
2641 5501 2.332117 TGTTTTACTCCCTCCGTTCCT 58.668 47.619 0.00 0.00 0.00 3.36
2642 5502 3.509442 TGTTTTACTCCCTCCGTTCCTA 58.491 45.455 0.00 0.00 0.00 2.94
2643 5503 3.903090 TGTTTTACTCCCTCCGTTCCTAA 59.097 43.478 0.00 0.00 0.00 2.69
2644 5504 4.347583 TGTTTTACTCCCTCCGTTCCTAAA 59.652 41.667 0.00 0.00 0.00 1.85
2645 5505 5.013391 TGTTTTACTCCCTCCGTTCCTAAAT 59.987 40.000 0.00 0.00 0.00 1.40
2646 5506 6.213195 TGTTTTACTCCCTCCGTTCCTAAATA 59.787 38.462 0.00 0.00 0.00 1.40
2647 5507 7.092757 TGTTTTACTCCCTCCGTTCCTAAATAT 60.093 37.037 0.00 0.00 0.00 1.28
2648 5508 8.424133 GTTTTACTCCCTCCGTTCCTAAATATA 58.576 37.037 0.00 0.00 0.00 0.86
2649 5509 8.551682 TTTACTCCCTCCGTTCCTAAATATAA 57.448 34.615 0.00 0.00 0.00 0.98
2650 5510 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2651 5511 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2652 5512 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2653 5513 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2654 5514 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2655 5515 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
2656 5516 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
2657 5517 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
2673 5533 8.622948 AAGTCTTTTTAGAGGTTCTAATGTGG 57.377 34.615 0.00 0.00 38.60 4.17
2674 5534 7.974504 AGTCTTTTTAGAGGTTCTAATGTGGA 58.025 34.615 0.00 0.00 38.60 4.02
2675 5535 7.878644 AGTCTTTTTAGAGGTTCTAATGTGGAC 59.121 37.037 0.00 6.54 38.60 4.02
2676 5536 7.878644 GTCTTTTTAGAGGTTCTAATGTGGACT 59.121 37.037 0.00 0.00 38.60 3.85
2677 5537 7.878127 TCTTTTTAGAGGTTCTAATGTGGACTG 59.122 37.037 0.00 0.00 38.60 3.51
2678 5538 3.618690 AGAGGTTCTAATGTGGACTGC 57.381 47.619 0.00 0.00 0.00 4.40
2679 5539 2.906389 AGAGGTTCTAATGTGGACTGCA 59.094 45.455 0.00 0.00 0.00 4.41
2680 5540 3.521126 AGAGGTTCTAATGTGGACTGCAT 59.479 43.478 0.00 0.00 0.00 3.96
2681 5541 4.716784 AGAGGTTCTAATGTGGACTGCATA 59.283 41.667 0.00 0.00 0.00 3.14
2682 5542 4.770795 AGGTTCTAATGTGGACTGCATAC 58.229 43.478 0.00 0.00 0.00 2.39
2683 5543 3.555956 GGTTCTAATGTGGACTGCATACG 59.444 47.826 0.00 0.00 0.00 3.06
2684 5544 3.452755 TCTAATGTGGACTGCATACGG 57.547 47.619 0.00 0.00 0.00 4.02
2685 5545 3.028130 TCTAATGTGGACTGCATACGGA 58.972 45.455 0.00 0.00 0.00 4.69
2686 5546 2.315925 AATGTGGACTGCATACGGAG 57.684 50.000 0.00 0.00 36.48 4.63
2705 5565 6.931838 ACGGAGTAAAATGAGTGAATCTACA 58.068 36.000 0.00 0.00 41.94 2.74
2706 5566 6.812160 ACGGAGTAAAATGAGTGAATCTACAC 59.188 38.462 0.00 0.00 41.94 2.90
2751 5611 9.832445 ACATCCGTATGTAGTCTTTATTGAAAT 57.168 29.630 0.00 0.00 44.66 2.17
2754 5614 9.745880 TCCGTATGTAGTCTTTATTGAAATCTC 57.254 33.333 0.00 0.00 0.00 2.75
2755 5615 9.751542 CCGTATGTAGTCTTTATTGAAATCTCT 57.248 33.333 0.00 0.00 0.00 3.10
2782 5642 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
2783 5643 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
2784 5644 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
2785 5645 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
2786 5646 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
2800 5660 1.580845 GGGAGTATCATGCATGGCGC 61.581 60.000 25.97 16.81 37.96 6.53
2832 5692 9.166173 TGTCTCTGTTTATGGTTCAATAATCAG 57.834 33.333 9.83 9.83 39.28 2.90
2889 5749 1.577328 CGCGTGGATCTTTGCCAAGT 61.577 55.000 0.00 0.00 37.25 3.16
2909 5769 6.405953 CCAAGTTGTACTATCTGTCGGAATCT 60.406 42.308 1.45 0.00 0.00 2.40
2939 5804 0.665835 TTTGTTGTGCGGCTAACCAG 59.334 50.000 14.77 0.00 34.57 4.00
2988 5853 4.478843 CACTGAAGAACCATTCTGTGTG 57.521 45.455 14.59 7.24 46.07 3.82
3042 5907 0.748367 GTTCAAGAATCGGGAGGGCC 60.748 60.000 0.00 0.00 0.00 5.80
3082 5947 0.393077 CACCTGAACCGAGGACAAGT 59.607 55.000 0.00 0.00 36.51 3.16
3287 6180 4.454161 AGTTTAGCATATGTGTTGCGTGAA 59.546 37.500 4.29 0.00 44.82 3.18
3288 6181 4.598406 TTAGCATATGTGTTGCGTGAAG 57.402 40.909 4.29 0.00 44.82 3.02
3289 6182 1.131126 AGCATATGTGTTGCGTGAAGC 59.869 47.619 4.29 0.00 44.82 3.86
3466 6359 0.399454 AGGATCATCAGGGCAATCCG 59.601 55.000 0.00 0.00 42.09 4.18
3482 6375 4.034510 GCAATCCGGAACAATCTTCTAGTG 59.965 45.833 9.01 0.00 0.00 2.74
3576 6469 0.183971 TGAAAGGGAAACGGAGCCAA 59.816 50.000 0.00 0.00 0.00 4.52
3578 6471 1.893137 GAAAGGGAAACGGAGCCAATT 59.107 47.619 0.00 0.00 0.00 2.32
3579 6472 2.009681 AAGGGAAACGGAGCCAATTT 57.990 45.000 0.00 0.00 0.00 1.82
3605 6498 4.200838 TCCATACTTGTGCTTTCGATCA 57.799 40.909 0.00 0.00 0.00 2.92
3609 6502 1.873591 ACTTGTGCTTTCGATCACACC 59.126 47.619 13.06 0.00 42.21 4.16
3666 6559 7.653647 CCCACTTAAAGCAAACAATTACTACA 58.346 34.615 0.00 0.00 0.00 2.74
3722 6723 0.674581 TGCTGATGGAAGGCAAGTCG 60.675 55.000 0.00 0.00 32.79 4.18
3767 6771 9.277783 GATTGTTGTACTATTGATCTTAGCCAT 57.722 33.333 0.00 0.00 0.00 4.40
3820 6828 3.429141 CTGCTTGCTGCCTGTCGG 61.429 66.667 0.00 0.00 42.00 4.79
3840 6849 0.879090 GTCCGGGCAAAGTAAAGTGG 59.121 55.000 0.00 0.00 0.00 4.00
3841 6850 0.891904 TCCGGGCAAAGTAAAGTGGC 60.892 55.000 0.00 0.00 39.48 5.01
3842 6851 1.175983 CCGGGCAAAGTAAAGTGGCA 61.176 55.000 0.00 0.00 41.85 4.92
3843 6852 0.671251 CGGGCAAAGTAAAGTGGCAA 59.329 50.000 0.00 0.00 41.85 4.52
3844 6853 1.335872 CGGGCAAAGTAAAGTGGCAAG 60.336 52.381 0.00 0.00 41.85 4.01
3866 6875 1.004440 GCAAGCCGGAGAACTGAGT 60.004 57.895 5.05 0.00 0.00 3.41
3867 6876 0.246635 GCAAGCCGGAGAACTGAGTA 59.753 55.000 5.05 0.00 0.00 2.59
3868 6877 1.997669 CAAGCCGGAGAACTGAGTAC 58.002 55.000 5.05 0.00 0.00 2.73
3869 6878 1.546476 CAAGCCGGAGAACTGAGTACT 59.454 52.381 5.05 0.00 0.00 2.73
3870 6879 1.465794 AGCCGGAGAACTGAGTACTC 58.534 55.000 16.32 16.32 0.00 2.59
3871 6880 0.456628 GCCGGAGAACTGAGTACTCC 59.543 60.000 20.11 4.63 44.50 3.85
3876 6885 4.394439 GGAGAACTGAGTACTCCAATCC 57.606 50.000 20.11 15.05 46.42 3.01
3877 6886 3.181485 GGAGAACTGAGTACTCCAATCCG 60.181 52.174 20.11 4.49 46.42 4.18
3889 6898 2.684881 CTCCAATCCGCTATTTGCAACT 59.315 45.455 0.00 0.00 43.06 3.16
3891 6900 3.876914 TCCAATCCGCTATTTGCAACTAG 59.123 43.478 17.14 17.14 43.06 2.57
3892 6901 3.627577 CCAATCCGCTATTTGCAACTAGT 59.372 43.478 20.94 3.01 43.06 2.57
3893 6902 4.814234 CCAATCCGCTATTTGCAACTAGTA 59.186 41.667 20.94 10.46 43.06 1.82
3897 6916 3.621268 CCGCTATTTGCAACTAGTAAGCA 59.379 43.478 20.94 16.41 43.06 3.91
3951 6970 3.697439 TAGCTGGATTGGCGGCACC 62.697 63.158 12.92 11.93 39.84 5.01
4001 7020 3.250280 GGTCATCATGCATAGTGCTGAAG 59.750 47.826 0.00 0.00 45.31 3.02
4002 7021 3.250280 GTCATCATGCATAGTGCTGAAGG 59.750 47.826 0.00 0.00 45.31 3.46
4003 7022 1.671979 TCATGCATAGTGCTGAAGGC 58.328 50.000 0.00 0.00 45.31 4.35
4004 7023 1.211212 TCATGCATAGTGCTGAAGGCT 59.789 47.619 0.00 0.00 45.31 4.58
4005 7024 1.333931 CATGCATAGTGCTGAAGGCTG 59.666 52.381 0.00 0.00 45.31 4.85
4006 7025 0.614812 TGCATAGTGCTGAAGGCTGA 59.385 50.000 3.41 0.00 45.31 4.26
4007 7026 1.211212 TGCATAGTGCTGAAGGCTGAT 59.789 47.619 3.41 0.00 45.31 2.90
4008 7027 2.435437 TGCATAGTGCTGAAGGCTGATA 59.565 45.455 3.41 0.00 45.31 2.15
4010 7029 3.397482 CATAGTGCTGAAGGCTGATACC 58.603 50.000 0.00 0.00 42.39 2.73
4012 7031 0.175760 GTGCTGAAGGCTGATACCGA 59.824 55.000 0.00 0.00 42.39 4.69
4013 7032 0.175760 TGCTGAAGGCTGATACCGAC 59.824 55.000 0.00 0.00 42.39 4.79
4014 7033 0.461961 GCTGAAGGCTGATACCGACT 59.538 55.000 0.00 0.00 38.06 4.18
4048 7070 2.522271 GAGCTCCTCCAGGTAAGGG 58.478 63.158 0.87 0.00 34.46 3.95
4049 7071 1.690985 AGCTCCTCCAGGTAAGGGC 60.691 63.158 0.00 0.00 34.46 5.19
4050 7072 1.995626 GCTCCTCCAGGTAAGGGCA 60.996 63.158 0.00 0.00 34.46 5.36
4051 7073 1.348775 GCTCCTCCAGGTAAGGGCAT 61.349 60.000 0.00 0.00 34.46 4.40
4052 7074 0.471617 CTCCTCCAGGTAAGGGCATG 59.528 60.000 0.00 0.00 34.46 4.06
4053 7075 0.253160 TCCTCCAGGTAAGGGCATGT 60.253 55.000 0.00 0.00 34.46 3.21
4054 7076 1.009060 TCCTCCAGGTAAGGGCATGTA 59.991 52.381 0.00 0.00 34.46 2.29
4055 7077 1.141053 CCTCCAGGTAAGGGCATGTAC 59.859 57.143 0.00 0.00 0.00 2.90
4056 7078 1.837439 CTCCAGGTAAGGGCATGTACA 59.163 52.381 0.00 0.00 0.00 2.90
4057 7079 2.439507 CTCCAGGTAAGGGCATGTACAT 59.560 50.000 1.41 1.41 0.00 2.29
4058 7080 2.438021 TCCAGGTAAGGGCATGTACATC 59.562 50.000 5.07 1.16 0.00 3.06
4059 7081 2.172505 CCAGGTAAGGGCATGTACATCA 59.827 50.000 5.07 0.00 0.00 3.07
4060 7082 3.470709 CAGGTAAGGGCATGTACATCAG 58.529 50.000 5.07 0.00 0.00 2.90
4061 7083 3.115390 AGGTAAGGGCATGTACATCAGT 58.885 45.455 5.07 0.00 0.00 3.41
4062 7084 3.523564 AGGTAAGGGCATGTACATCAGTT 59.476 43.478 5.07 0.29 0.00 3.16
4063 7085 4.018415 AGGTAAGGGCATGTACATCAGTTT 60.018 41.667 5.07 1.80 0.00 2.66
4064 7086 5.190925 AGGTAAGGGCATGTACATCAGTTTA 59.809 40.000 5.07 0.86 0.00 2.01
4065 7087 5.527582 GGTAAGGGCATGTACATCAGTTTAG 59.472 44.000 5.07 0.00 0.00 1.85
4066 7088 5.435686 AAGGGCATGTACATCAGTTTAGA 57.564 39.130 5.07 0.00 0.00 2.10
4067 7089 4.770795 AGGGCATGTACATCAGTTTAGAC 58.229 43.478 5.07 0.00 0.00 2.59
4068 7090 4.225042 AGGGCATGTACATCAGTTTAGACA 59.775 41.667 5.07 0.00 0.00 3.41
4069 7091 4.332819 GGGCATGTACATCAGTTTAGACAC 59.667 45.833 5.07 0.00 0.00 3.67
4070 7092 5.178797 GGCATGTACATCAGTTTAGACACT 58.821 41.667 5.07 0.00 0.00 3.55
4071 7093 5.063944 GGCATGTACATCAGTTTAGACACTG 59.936 44.000 5.07 0.00 44.96 3.66
4072 7094 5.639506 GCATGTACATCAGTTTAGACACTGT 59.360 40.000 5.07 0.00 44.10 3.55
4073 7095 6.811665 GCATGTACATCAGTTTAGACACTGTA 59.188 38.462 5.07 0.00 44.10 2.74
4074 7096 7.330946 GCATGTACATCAGTTTAGACACTGTAA 59.669 37.037 5.07 0.00 44.10 2.41
4075 7097 9.371136 CATGTACATCAGTTTAGACACTGTAAT 57.629 33.333 5.07 0.00 44.10 1.89
4076 7098 8.757164 TGTACATCAGTTTAGACACTGTAATG 57.243 34.615 0.00 1.87 44.10 1.90
4077 7099 8.581578 TGTACATCAGTTTAGACACTGTAATGA 58.418 33.333 8.66 0.00 44.10 2.57
4078 7100 9.587772 GTACATCAGTTTAGACACTGTAATGAT 57.412 33.333 8.66 0.00 44.10 2.45
4079 7101 8.709386 ACATCAGTTTAGACACTGTAATGATC 57.291 34.615 8.66 0.00 44.10 2.92
4080 7102 8.314021 ACATCAGTTTAGACACTGTAATGATCA 58.686 33.333 0.00 0.00 44.10 2.92
4081 7103 9.322773 CATCAGTTTAGACACTGTAATGATCAT 57.677 33.333 1.18 1.18 44.10 2.45
4082 7104 8.932945 TCAGTTTAGACACTGTAATGATCATC 57.067 34.615 9.06 0.00 44.10 2.92
4083 7105 7.981789 TCAGTTTAGACACTGTAATGATCATCC 59.018 37.037 9.06 3.55 44.10 3.51
4084 7106 7.765819 CAGTTTAGACACTGTAATGATCATCCA 59.234 37.037 9.06 8.14 39.59 3.41
4085 7107 7.766278 AGTTTAGACACTGTAATGATCATCCAC 59.234 37.037 9.06 10.66 0.00 4.02
4086 7108 4.686972 AGACACTGTAATGATCATCCACG 58.313 43.478 9.06 9.00 0.00 4.94
4087 7109 4.160439 AGACACTGTAATGATCATCCACGT 59.840 41.667 9.06 9.54 0.00 4.49
4088 7110 4.433615 ACACTGTAATGATCATCCACGTC 58.566 43.478 9.06 0.00 0.00 4.34
4089 7111 4.081697 ACACTGTAATGATCATCCACGTCA 60.082 41.667 9.06 2.19 0.00 4.35
4090 7112 5.052481 CACTGTAATGATCATCCACGTCAT 58.948 41.667 9.06 0.00 34.23 3.06
4091 7113 5.176406 CACTGTAATGATCATCCACGTCATC 59.824 44.000 9.06 0.00 31.74 2.92
4092 7114 5.069648 ACTGTAATGATCATCCACGTCATCT 59.930 40.000 9.06 0.00 31.74 2.90
4093 7115 6.265422 ACTGTAATGATCATCCACGTCATCTA 59.735 38.462 9.06 0.00 31.74 1.98
4094 7116 7.039434 ACTGTAATGATCATCCACGTCATCTAT 60.039 37.037 9.06 0.00 31.74 1.98
4095 7117 8.348285 TGTAATGATCATCCACGTCATCTATA 57.652 34.615 9.06 0.00 31.74 1.31
4096 7118 8.462016 TGTAATGATCATCCACGTCATCTATAG 58.538 37.037 9.06 0.00 31.74 1.31
4097 7119 7.709149 AATGATCATCCACGTCATCTATAGA 57.291 36.000 9.06 4.57 31.74 1.98
4098 7120 6.502136 TGATCATCCACGTCATCTATAGAC 57.498 41.667 4.10 0.00 0.00 2.59
4099 7121 6.003950 TGATCATCCACGTCATCTATAGACA 58.996 40.000 4.10 0.00 35.77 3.41
4100 7122 5.948992 TCATCCACGTCATCTATAGACAG 57.051 43.478 4.10 1.00 35.77 3.51
4101 7123 4.216472 TCATCCACGTCATCTATAGACAGC 59.784 45.833 4.10 0.00 35.77 4.40
4102 7124 3.551846 TCCACGTCATCTATAGACAGCA 58.448 45.455 4.10 0.00 35.77 4.41
4103 7125 3.565902 TCCACGTCATCTATAGACAGCAG 59.434 47.826 4.10 0.00 35.77 4.24
4104 7126 3.316588 CCACGTCATCTATAGACAGCAGT 59.683 47.826 4.10 0.00 35.77 4.40
4105 7127 4.515567 CCACGTCATCTATAGACAGCAGTA 59.484 45.833 4.10 0.00 35.77 2.74
4106 7128 5.008712 CCACGTCATCTATAGACAGCAGTAA 59.991 44.000 4.10 0.00 35.77 2.24
4107 7129 6.459710 CCACGTCATCTATAGACAGCAGTAAA 60.460 42.308 4.10 0.00 35.77 2.01
4108 7130 6.972901 CACGTCATCTATAGACAGCAGTAAAA 59.027 38.462 4.10 0.00 35.77 1.52
4109 7131 7.488150 CACGTCATCTATAGACAGCAGTAAAAA 59.512 37.037 4.10 0.00 35.77 1.94
4110 7132 7.488471 ACGTCATCTATAGACAGCAGTAAAAAC 59.512 37.037 4.10 0.00 35.77 2.43
4111 7133 7.488150 CGTCATCTATAGACAGCAGTAAAAACA 59.512 37.037 4.10 0.00 35.77 2.83
4112 7134 9.319143 GTCATCTATAGACAGCAGTAAAAACAT 57.681 33.333 4.10 0.00 36.06 2.71
4113 7135 9.534565 TCATCTATAGACAGCAGTAAAAACATC 57.465 33.333 4.10 0.00 0.00 3.06
4114 7136 9.317936 CATCTATAGACAGCAGTAAAAACATCA 57.682 33.333 4.10 0.00 0.00 3.07
4116 7138 9.534565 TCTATAGACAGCAGTAAAAACATCATC 57.465 33.333 0.00 0.00 0.00 2.92
4117 7139 9.539825 CTATAGACAGCAGTAAAAACATCATCT 57.460 33.333 0.00 0.00 0.00 2.90
4119 7141 7.602517 AGACAGCAGTAAAAACATCATCTAC 57.397 36.000 0.00 0.00 0.00 2.59
4120 7142 7.161404 AGACAGCAGTAAAAACATCATCTACA 58.839 34.615 0.00 0.00 0.00 2.74
4121 7143 7.661437 AGACAGCAGTAAAAACATCATCTACAA 59.339 33.333 0.00 0.00 0.00 2.41
4122 7144 8.340618 ACAGCAGTAAAAACATCATCTACAAT 57.659 30.769 0.00 0.00 0.00 2.71
4123 7145 9.448438 ACAGCAGTAAAAACATCATCTACAATA 57.552 29.630 0.00 0.00 0.00 1.90
4124 7146 9.926751 CAGCAGTAAAAACATCATCTACAATAG 57.073 33.333 0.00 0.00 0.00 1.73
4125 7147 9.672673 AGCAGTAAAAACATCATCTACAATAGT 57.327 29.630 0.00 0.00 0.00 2.12
4126 7148 9.922305 GCAGTAAAAACATCATCTACAATAGTC 57.078 33.333 0.00 0.00 0.00 2.59
4129 7151 9.922305 GTAAAAACATCATCTACAATAGTCTGC 57.078 33.333 0.00 0.00 0.00 4.26
4130 7152 8.798859 AAAAACATCATCTACAATAGTCTGCT 57.201 30.769 0.00 0.00 0.00 4.24
4131 7153 8.798859 AAAACATCATCTACAATAGTCTGCTT 57.201 30.769 0.00 0.00 0.00 3.91
4132 7154 8.798859 AAACATCATCTACAATAGTCTGCTTT 57.201 30.769 0.00 0.00 0.00 3.51
4133 7155 8.798859 AACATCATCTACAATAGTCTGCTTTT 57.201 30.769 0.00 0.00 0.00 2.27
4134 7156 8.798859 ACATCATCTACAATAGTCTGCTTTTT 57.201 30.769 0.00 0.00 0.00 1.94
4157 7179 2.922384 CTATCTGTAGCACGTGGATCG 58.078 52.381 18.88 3.45 46.00 3.69
4166 7188 2.509336 CGTGGATCGTGGGCAGAC 60.509 66.667 0.00 0.00 34.52 3.51
4167 7189 2.125106 GTGGATCGTGGGCAGACC 60.125 66.667 0.00 0.00 40.81 3.85
4168 7190 3.770040 TGGATCGTGGGCAGACCG 61.770 66.667 0.00 0.00 44.64 4.79
4179 7201 2.046023 CAGACCGCTGCATGGGAA 60.046 61.111 9.94 0.00 34.95 3.97
4180 7202 2.045926 AGACCGCTGCATGGGAAC 60.046 61.111 9.94 4.23 0.00 3.62
4199 7221 5.963594 GGAACCTCTATCTTTCGTTGTACT 58.036 41.667 0.00 0.00 0.00 2.73
4200 7222 6.396450 GGAACCTCTATCTTTCGTTGTACTT 58.604 40.000 0.00 0.00 0.00 2.24
4201 7223 6.530887 GGAACCTCTATCTTTCGTTGTACTTC 59.469 42.308 0.00 0.00 0.00 3.01
4202 7224 6.837471 ACCTCTATCTTTCGTTGTACTTCT 57.163 37.500 0.00 0.00 0.00 2.85
4203 7225 7.229581 ACCTCTATCTTTCGTTGTACTTCTT 57.770 36.000 0.00 0.00 0.00 2.52
4204 7226 7.091443 ACCTCTATCTTTCGTTGTACTTCTTG 58.909 38.462 0.00 0.00 0.00 3.02
4205 7227 6.035112 CCTCTATCTTTCGTTGTACTTCTTGC 59.965 42.308 0.00 0.00 0.00 4.01
4206 7228 5.867716 TCTATCTTTCGTTGTACTTCTTGCC 59.132 40.000 0.00 0.00 0.00 4.52
4207 7229 3.135994 TCTTTCGTTGTACTTCTTGCCC 58.864 45.455 0.00 0.00 0.00 5.36
4208 7230 2.623878 TTCGTTGTACTTCTTGCCCA 57.376 45.000 0.00 0.00 0.00 5.36
4209 7231 2.163818 TCGTTGTACTTCTTGCCCAG 57.836 50.000 0.00 0.00 0.00 4.45
4210 7232 1.689813 TCGTTGTACTTCTTGCCCAGA 59.310 47.619 0.00 0.00 0.00 3.86
4211 7233 2.103432 TCGTTGTACTTCTTGCCCAGAA 59.897 45.455 0.00 0.00 39.39 3.02
4212 7234 2.223377 CGTTGTACTTCTTGCCCAGAAC 59.777 50.000 0.00 0.00 36.51 3.01
4213 7235 2.163818 TGTACTTCTTGCCCAGAACG 57.836 50.000 0.00 0.00 36.51 3.95
4214 7236 1.414919 TGTACTTCTTGCCCAGAACGT 59.585 47.619 0.00 0.00 36.51 3.99
4215 7237 1.798813 GTACTTCTTGCCCAGAACGTG 59.201 52.381 0.00 0.00 36.51 4.49
4223 7245 2.425592 CCAGAACGTGGGCACTGA 59.574 61.111 0.00 0.00 43.63 3.41
4224 7246 1.003355 CCAGAACGTGGGCACTGAT 60.003 57.895 0.00 0.00 43.63 2.90
4225 7247 1.300971 CCAGAACGTGGGCACTGATG 61.301 60.000 0.00 0.00 43.63 3.07
4236 7258 3.024423 CACTGATGCATGCAAACCG 57.976 52.632 26.68 19.04 0.00 4.44
4237 7259 1.074319 CACTGATGCATGCAAACCGC 61.074 55.000 26.68 12.14 42.89 5.68
4247 7269 3.829754 GCAAACCGCAAACTAACGA 57.170 47.368 0.00 0.00 41.79 3.85
4248 7270 1.391787 GCAAACCGCAAACTAACGAC 58.608 50.000 0.00 0.00 41.79 4.34
4249 7271 1.654463 CAAACCGCAAACTAACGACG 58.346 50.000 0.00 0.00 0.00 5.12
4250 7272 0.041926 AAACCGCAAACTAACGACGC 60.042 50.000 0.00 0.00 0.00 5.19
4251 7273 1.834458 AACCGCAAACTAACGACGCC 61.834 55.000 0.00 0.00 0.00 5.68
4252 7274 2.025418 CCGCAAACTAACGACGCCT 61.025 57.895 0.00 0.00 0.00 5.52
4253 7275 1.129809 CGCAAACTAACGACGCCTG 59.870 57.895 0.00 0.00 0.00 4.85
4254 7276 1.279527 CGCAAACTAACGACGCCTGA 61.280 55.000 0.00 0.00 0.00 3.86
4255 7277 0.438830 GCAAACTAACGACGCCTGAG 59.561 55.000 0.00 0.00 0.00 3.35
4256 7278 0.438830 CAAACTAACGACGCCTGAGC 59.561 55.000 0.00 0.00 0.00 4.26
4266 7288 2.813908 GCCTGAGCGTACAACGGG 60.814 66.667 1.25 0.00 42.82 5.28
4267 7289 2.125673 CCTGAGCGTACAACGGGG 60.126 66.667 1.25 0.00 42.82 5.73
4268 7290 2.642254 CCTGAGCGTACAACGGGGA 61.642 63.158 1.25 0.00 42.82 4.81
4269 7291 1.153823 CTGAGCGTACAACGGGGAG 60.154 63.158 1.25 0.00 42.82 4.30
4270 7292 2.183555 GAGCGTACAACGGGGAGG 59.816 66.667 1.25 0.00 42.82 4.30
4271 7293 2.283388 AGCGTACAACGGGGAGGA 60.283 61.111 1.25 0.00 42.82 3.71
4272 7294 1.673808 GAGCGTACAACGGGGAGGAT 61.674 60.000 1.25 0.00 42.82 3.24
4273 7295 0.396139 AGCGTACAACGGGGAGGATA 60.396 55.000 1.25 0.00 42.82 2.59
4274 7296 0.677842 GCGTACAACGGGGAGGATAT 59.322 55.000 1.25 0.00 42.82 1.63
4275 7297 1.336609 GCGTACAACGGGGAGGATATC 60.337 57.143 1.25 0.00 42.82 1.63
4276 7298 1.068748 CGTACAACGGGGAGGATATCG 60.069 57.143 0.00 0.00 38.08 2.92
4277 7299 2.233271 GTACAACGGGGAGGATATCGA 58.767 52.381 0.00 0.00 0.00 3.59
4278 7300 1.038280 ACAACGGGGAGGATATCGAC 58.962 55.000 0.00 0.00 0.00 4.20
4279 7301 0.317479 CAACGGGGAGGATATCGACC 59.683 60.000 7.90 7.90 0.00 4.79
4280 7302 3.275088 CGGGGAGGATATCGACCG 58.725 66.667 10.26 10.26 40.98 4.79
4281 7303 1.602888 CGGGGAGGATATCGACCGT 60.603 63.158 14.19 0.00 41.55 4.83
4282 7304 1.584380 CGGGGAGGATATCGACCGTC 61.584 65.000 14.19 7.69 41.55 4.79
4283 7305 0.251253 GGGGAGGATATCGACCGTCT 60.251 60.000 9.61 0.00 0.00 4.18
4284 7306 0.882474 GGGAGGATATCGACCGTCTG 59.118 60.000 9.61 0.00 0.00 3.51
4285 7307 0.241481 GGAGGATATCGACCGTCTGC 59.759 60.000 0.00 0.00 0.00 4.26
4286 7308 0.952280 GAGGATATCGACCGTCTGCA 59.048 55.000 0.00 0.00 0.00 4.41
4287 7309 1.337071 GAGGATATCGACCGTCTGCAA 59.663 52.381 0.00 0.00 0.00 4.08
4288 7310 1.754803 AGGATATCGACCGTCTGCAAA 59.245 47.619 0.00 0.00 0.00 3.68
4289 7311 2.167693 AGGATATCGACCGTCTGCAAAA 59.832 45.455 0.00 0.00 0.00 2.44
4290 7312 3.131396 GGATATCGACCGTCTGCAAAAT 58.869 45.455 0.00 0.00 0.00 1.82
4291 7313 3.560068 GGATATCGACCGTCTGCAAAATT 59.440 43.478 0.00 0.00 0.00 1.82
4292 7314 4.748102 GGATATCGACCGTCTGCAAAATTA 59.252 41.667 0.00 0.00 0.00 1.40
4293 7315 5.235616 GGATATCGACCGTCTGCAAAATTAA 59.764 40.000 0.00 0.00 0.00 1.40
4294 7316 3.799137 TCGACCGTCTGCAAAATTAAC 57.201 42.857 0.00 0.00 0.00 2.01
4295 7317 2.156117 TCGACCGTCTGCAAAATTAACG 59.844 45.455 0.00 0.00 0.00 3.18
4296 7318 2.156117 CGACCGTCTGCAAAATTAACGA 59.844 45.455 0.00 0.00 35.45 3.85
4297 7319 3.476181 GACCGTCTGCAAAATTAACGAC 58.524 45.455 0.00 0.00 35.45 4.34
4298 7320 2.873472 ACCGTCTGCAAAATTAACGACA 59.127 40.909 0.00 0.00 35.45 4.35
4299 7321 3.223157 CCGTCTGCAAAATTAACGACAC 58.777 45.455 0.00 0.00 35.45 3.67
4300 7322 3.223157 CGTCTGCAAAATTAACGACACC 58.777 45.455 0.00 0.00 35.45 4.16
4301 7323 3.561503 GTCTGCAAAATTAACGACACCC 58.438 45.455 0.00 0.00 0.00 4.61
4302 7324 3.252458 GTCTGCAAAATTAACGACACCCT 59.748 43.478 0.00 0.00 0.00 4.34
4303 7325 3.500680 TCTGCAAAATTAACGACACCCTC 59.499 43.478 0.00 0.00 0.00 4.30
4307 7329 2.375173 AATTAACGACACCCTCGGTC 57.625 50.000 0.00 0.00 38.12 4.79
4308 7330 1.553706 ATTAACGACACCCTCGGTCT 58.446 50.000 0.00 0.00 38.12 3.85
4309 7331 0.883833 TTAACGACACCCTCGGTCTC 59.116 55.000 0.00 0.00 38.12 3.36
4310 7332 0.037303 TAACGACACCCTCGGTCTCT 59.963 55.000 0.00 0.00 38.12 3.10
4311 7333 1.242665 AACGACACCCTCGGTCTCTC 61.243 60.000 0.00 0.00 38.12 3.20
4312 7334 1.377463 CGACACCCTCGGTCTCTCT 60.377 63.158 0.00 0.00 38.87 3.10
4313 7335 1.370587 CGACACCCTCGGTCTCTCTC 61.371 65.000 0.00 0.00 38.87 3.20
4314 7336 1.000646 ACACCCTCGGTCTCTCTCC 60.001 63.158 0.00 0.00 31.02 3.71
4315 7337 1.304952 CACCCTCGGTCTCTCTCCT 59.695 63.158 0.00 0.00 31.02 3.69
4316 7338 0.547075 CACCCTCGGTCTCTCTCCTA 59.453 60.000 0.00 0.00 31.02 2.94
4317 7339 0.841289 ACCCTCGGTCTCTCTCCTAG 59.159 60.000 0.00 0.00 0.00 3.02
4318 7340 0.536460 CCCTCGGTCTCTCTCCTAGC 60.536 65.000 0.00 0.00 0.00 3.42
4319 7341 0.472471 CCTCGGTCTCTCTCCTAGCT 59.528 60.000 0.00 0.00 0.00 3.32
4320 7342 1.542547 CCTCGGTCTCTCTCCTAGCTC 60.543 61.905 0.00 0.00 0.00 4.09
4321 7343 1.416401 CTCGGTCTCTCTCCTAGCTCT 59.584 57.143 0.00 0.00 0.00 4.09
4322 7344 1.414919 TCGGTCTCTCTCCTAGCTCTC 59.585 57.143 0.00 0.00 0.00 3.20
4323 7345 1.416401 CGGTCTCTCTCCTAGCTCTCT 59.584 57.143 0.00 0.00 0.00 3.10
4324 7346 2.548067 CGGTCTCTCTCCTAGCTCTCTC 60.548 59.091 0.00 0.00 0.00 3.20
4325 7347 2.706190 GGTCTCTCTCCTAGCTCTCTCT 59.294 54.545 0.00 0.00 0.00 3.10
4326 7348 3.244249 GGTCTCTCTCCTAGCTCTCTCTC 60.244 56.522 0.00 0.00 0.00 3.20
4327 7349 2.972713 TCTCTCTCCTAGCTCTCTCTCC 59.027 54.545 0.00 0.00 0.00 3.71
4328 7350 2.975489 CTCTCTCCTAGCTCTCTCTCCT 59.025 54.545 0.00 0.00 0.00 3.69
4329 7351 2.972713 TCTCTCCTAGCTCTCTCTCCTC 59.027 54.545 0.00 0.00 0.00 3.71
4330 7352 2.039084 CTCTCCTAGCTCTCTCTCCTCC 59.961 59.091 0.00 0.00 0.00 4.30
4331 7353 1.774254 CTCCTAGCTCTCTCTCCTCCA 59.226 57.143 0.00 0.00 0.00 3.86
4332 7354 2.376518 CTCCTAGCTCTCTCTCCTCCAT 59.623 54.545 0.00 0.00 0.00 3.41
4333 7355 2.108075 TCCTAGCTCTCTCTCCTCCATG 59.892 54.545 0.00 0.00 0.00 3.66
4334 7356 2.158475 CCTAGCTCTCTCTCCTCCATGT 60.158 54.545 0.00 0.00 0.00 3.21
4335 7357 3.073798 CCTAGCTCTCTCTCCTCCATGTA 59.926 52.174 0.00 0.00 0.00 2.29
4336 7358 3.678965 AGCTCTCTCTCCTCCATGTAA 57.321 47.619 0.00 0.00 0.00 2.41
4337 7359 4.197559 AGCTCTCTCTCCTCCATGTAAT 57.802 45.455 0.00 0.00 0.00 1.89
4338 7360 3.896888 AGCTCTCTCTCCTCCATGTAATG 59.103 47.826 0.00 0.00 46.21 1.90
4354 7376 5.643379 TGTAATGAAAAATCTGAGGTGGC 57.357 39.130 0.00 0.00 0.00 5.01
4355 7377 5.076182 TGTAATGAAAAATCTGAGGTGGCA 58.924 37.500 0.00 0.00 0.00 4.92
4356 7378 5.716228 TGTAATGAAAAATCTGAGGTGGCAT 59.284 36.000 0.00 0.00 0.00 4.40
4357 7379 6.889177 TGTAATGAAAAATCTGAGGTGGCATA 59.111 34.615 0.00 0.00 0.00 3.14
4358 7380 5.841957 ATGAAAAATCTGAGGTGGCATAC 57.158 39.130 0.00 0.00 0.00 2.39
4359 7381 3.689161 TGAAAAATCTGAGGTGGCATACG 59.311 43.478 0.00 0.00 0.00 3.06
4360 7382 3.350219 AAAATCTGAGGTGGCATACGT 57.650 42.857 0.00 0.00 0.00 3.57
4361 7383 3.350219 AAATCTGAGGTGGCATACGTT 57.650 42.857 0.00 0.00 0.00 3.99
4362 7384 4.481368 AAATCTGAGGTGGCATACGTTA 57.519 40.909 0.00 0.00 0.00 3.18
4363 7385 4.689612 AATCTGAGGTGGCATACGTTAT 57.310 40.909 0.00 0.00 0.00 1.89
4364 7386 5.801531 AATCTGAGGTGGCATACGTTATA 57.198 39.130 0.00 0.00 0.00 0.98
4365 7387 4.848562 TCTGAGGTGGCATACGTTATAG 57.151 45.455 0.00 0.00 0.00 1.31
4366 7388 4.466827 TCTGAGGTGGCATACGTTATAGA 58.533 43.478 0.00 0.00 0.00 1.98
4367 7389 4.277672 TCTGAGGTGGCATACGTTATAGAC 59.722 45.833 0.00 0.00 0.00 2.59
4382 7404 6.707599 GTTATAGACGGTTGATTAGATGCC 57.292 41.667 0.00 0.00 0.00 4.40
4383 7405 2.225068 AGACGGTTGATTAGATGCCG 57.775 50.000 0.00 0.00 46.83 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 0.530744 AGACTAACATGGCTCGCGAA 59.469 50.000 11.33 0.00 0.00 4.70
32 33 1.385528 TAGACTAACATGGCTCGCGA 58.614 50.000 9.26 9.26 0.00 5.87
63 64 9.283420 GTAACTTGAACCTATTAACGTAGAGAC 57.717 37.037 0.00 0.00 0.00 3.36
75 76 6.998673 AGCTTGAAACTGTAACTTGAACCTAT 59.001 34.615 0.00 0.00 0.00 2.57
76 77 6.354130 AGCTTGAAACTGTAACTTGAACCTA 58.646 36.000 0.00 0.00 0.00 3.08
95 96 7.696872 CACTCAATACTTTCATGATGAAGCTTG 59.303 37.037 2.10 10.21 37.70 4.01
99 100 6.965500 GCACACTCAATACTTTCATGATGAAG 59.035 38.462 8.01 0.30 37.70 3.02
100 101 6.430616 TGCACACTCAATACTTTCATGATGAA 59.569 34.615 3.29 3.29 34.03 2.57
101 102 5.939296 TGCACACTCAATACTTTCATGATGA 59.061 36.000 0.00 0.00 0.00 2.92
102 103 6.185852 TGCACACTCAATACTTTCATGATG 57.814 37.500 0.00 0.00 0.00 3.07
103 104 7.255035 GCTATGCACACTCAATACTTTCATGAT 60.255 37.037 0.00 0.00 0.00 2.45
104 105 6.037500 GCTATGCACACTCAATACTTTCATGA 59.962 38.462 0.00 0.00 0.00 3.07
105 106 6.183360 TGCTATGCACACTCAATACTTTCATG 60.183 38.462 0.00 0.00 31.71 3.07
106 107 5.882000 TGCTATGCACACTCAATACTTTCAT 59.118 36.000 0.00 0.00 31.71 2.57
107 108 5.244755 TGCTATGCACACTCAATACTTTCA 58.755 37.500 0.00 0.00 31.71 2.69
123 124 5.624081 GCATTATCGATTGCATATGCTATGC 59.376 40.000 25.97 18.99 44.76 3.14
124 125 6.140786 GGCATTATCGATTGCATATGCTATG 58.859 40.000 25.97 17.96 40.66 2.23
132 133 4.503734 CGTTTTTGGCATTATCGATTGCAT 59.496 37.500 20.53 2.12 40.66 3.96
138 139 3.189495 TGCTTCGTTTTTGGCATTATCGA 59.811 39.130 0.00 0.00 0.00 3.59
139 140 3.497118 TGCTTCGTTTTTGGCATTATCG 58.503 40.909 0.00 0.00 0.00 2.92
145 146 3.717400 TTACATGCTTCGTTTTTGGCA 57.283 38.095 0.00 0.00 39.06 4.92
215 216 1.202222 GCTGCATATTGTGGACACTGC 60.202 52.381 3.91 5.83 0.00 4.40
232 233 3.192001 ACCTGCAATTCTGTATTGTGCTG 59.808 43.478 8.49 0.00 44.52 4.41
257 258 2.173126 AGCCTATCTTCAGAGTGGCT 57.827 50.000 15.69 15.69 45.38 4.75
266 267 3.314635 CACCTCATGCAAAGCCTATCTTC 59.685 47.826 0.00 0.00 32.88 2.87
301 302 9.525826 AAAGAGATTTGGTGTTTCAGAATATCT 57.474 29.630 0.00 0.00 31.70 1.98
308 310 7.137426 CAGAAGAAAGAGATTTGGTGTTTCAG 58.863 38.462 0.00 0.00 30.92 3.02
321 323 0.388649 GCCGTCGCAGAAGAAAGAGA 60.389 55.000 0.00 0.00 38.59 3.10
336 338 0.673437 CCAGGTGTTTGATTTGCCGT 59.327 50.000 0.00 0.00 0.00 5.68
337 339 0.667184 GCCAGGTGTTTGATTTGCCG 60.667 55.000 0.00 0.00 0.00 5.69
338 340 0.320683 GGCCAGGTGTTTGATTTGCC 60.321 55.000 0.00 0.00 0.00 4.52
339 341 0.392336 TGGCCAGGTGTTTGATTTGC 59.608 50.000 0.00 0.00 0.00 3.68
340 342 2.871633 GTTTGGCCAGGTGTTTGATTTG 59.128 45.455 5.11 0.00 0.00 2.32
341 343 2.158827 GGTTTGGCCAGGTGTTTGATTT 60.159 45.455 5.11 0.00 37.17 2.17
342 344 1.416030 GGTTTGGCCAGGTGTTTGATT 59.584 47.619 5.11 0.00 37.17 2.57
343 345 1.047801 GGTTTGGCCAGGTGTTTGAT 58.952 50.000 5.11 0.00 37.17 2.57
344 346 0.324738 TGGTTTGGCCAGGTGTTTGA 60.325 50.000 5.11 0.00 43.61 2.69
345 347 2.206635 TGGTTTGGCCAGGTGTTTG 58.793 52.632 5.11 0.00 43.61 2.93
346 348 4.796408 TGGTTTGGCCAGGTGTTT 57.204 50.000 5.11 0.00 43.61 2.83
377 379 4.194640 AGATGTGATATTGAGTGTGGTGC 58.805 43.478 0.00 0.00 0.00 5.01
404 406 2.137810 ACAGAGGTAGAGTGAGAGCC 57.862 55.000 0.00 0.00 0.00 4.70
717 738 1.500512 CGGGTGAAGAAACCGCGAAA 61.501 55.000 8.23 0.00 41.52 3.46
753 1008 1.640917 AACCCTAGAACGCTGGAGAA 58.359 50.000 0.00 0.00 0.00 2.87
805 1060 3.554692 CAAGGCGCGGCTAGAACG 61.555 66.667 36.46 17.45 0.00 3.95
806 1061 3.865830 GCAAGGCGCGGCTAGAAC 61.866 66.667 36.46 20.58 0.00 3.01
832 1087 2.184322 GATGCCGGCGAGACAAGA 59.816 61.111 23.90 0.49 0.00 3.02
895 1150 1.566018 GGCAAGCAGGTGTACACGAC 61.566 60.000 19.41 11.12 0.00 4.34
896 1151 1.301401 GGCAAGCAGGTGTACACGA 60.301 57.895 19.41 0.00 0.00 4.35
897 1152 2.667318 CGGCAAGCAGGTGTACACG 61.667 63.158 19.41 8.15 0.00 4.49
902 1165 0.602905 GTAGTTCGGCAAGCAGGTGT 60.603 55.000 0.00 0.00 0.00 4.16
908 1171 1.362406 GCTCAGGTAGTTCGGCAAGC 61.362 60.000 0.00 0.00 0.00 4.01
912 1175 1.811679 GCTGCTCAGGTAGTTCGGC 60.812 63.158 0.00 0.00 0.00 5.54
915 1178 1.811679 GGCGCTGCTCAGGTAGTTC 60.812 63.158 7.64 0.00 0.00 3.01
923 1186 3.052620 GACTACGAGGCGCTGCTCA 62.053 63.158 7.64 0.00 0.00 4.26
1026 1292 1.423056 CTCGTAGTGGTCGACGTCC 59.577 63.158 10.58 4.02 41.85 4.79
1173 1439 2.665000 CTGGCGAGGCTCTGGAAA 59.335 61.111 13.50 0.00 0.00 3.13
1617 1897 6.039047 GCTGGATGAGATCTTTAAGCAATTCA 59.961 38.462 0.00 0.00 0.00 2.57
1695 2278 5.467705 TCTAACGTCTAAAGCTCAACTTCC 58.532 41.667 0.00 0.00 37.75 3.46
2087 4817 7.336396 ACTCTGTTTGTAGGTTAACACTTTCT 58.664 34.615 8.10 0.00 31.46 2.52
2089 4819 9.623000 ATTACTCTGTTTGTAGGTTAACACTTT 57.377 29.630 8.10 0.00 31.46 2.66
2125 4855 1.656652 ATGACCTATCAGCGTTGTGC 58.343 50.000 0.00 0.00 46.98 4.57
2131 4861 2.103094 TGAAGGGAATGACCTATCAGCG 59.897 50.000 0.00 0.00 40.87 5.18
2201 5042 5.335504 GGTCAGTCAGTAGTAGTACCAACAC 60.336 48.000 4.02 0.00 0.00 3.32
2319 5160 1.754201 GCACCACCTTCCCAAGAAACT 60.754 52.381 0.00 0.00 0.00 2.66
2391 5232 6.057533 AGTCTTGATCACAATGTCTTCAACA 58.942 36.000 0.00 0.00 43.51 3.33
2446 5287 3.094572 CCTCTTTGGAAGCCATGACAAT 58.905 45.455 0.00 0.00 38.35 2.71
2498 5342 6.794534 AGGTAGAAAATTTCTCCAGGACAAT 58.205 36.000 11.97 0.00 41.14 2.71
2562 5407 1.865970 GCGGATCTGAAATGAGCTCAG 59.134 52.381 22.96 8.09 41.47 3.35
2581 5426 5.661458 TGCAAACTCCTACTATCTTGTAGC 58.339 41.667 0.00 0.00 38.75 3.58
2593 5438 1.795768 CGACTGCTTGCAAACTCCTA 58.204 50.000 0.00 0.00 0.00 2.94
2594 5439 1.510480 GCGACTGCTTGCAAACTCCT 61.510 55.000 0.00 0.00 38.39 3.69
2595 5440 1.081840 GCGACTGCTTGCAAACTCC 60.082 57.895 0.00 0.00 38.39 3.85
2609 5454 4.270325 GGGAGTAAAACATAGACATGCGAC 59.730 45.833 0.00 0.00 35.39 5.19
2617 5477 4.161001 GGAACGGAGGGAGTAAAACATAGA 59.839 45.833 0.00 0.00 0.00 1.98
2627 5487 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
2628 5488 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
2629 5489 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
2630 5490 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
2631 5491 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
2647 5507 9.720769 CCACATTAGAACCTCTAAAAAGACTTA 57.279 33.333 0.50 0.00 41.72 2.24
2648 5508 8.437575 TCCACATTAGAACCTCTAAAAAGACTT 58.562 33.333 0.50 0.00 41.72 3.01
2649 5509 7.878644 GTCCACATTAGAACCTCTAAAAAGACT 59.121 37.037 0.50 0.00 41.72 3.24
2650 5510 7.878644 AGTCCACATTAGAACCTCTAAAAAGAC 59.121 37.037 0.50 5.95 41.72 3.01
2651 5511 7.878127 CAGTCCACATTAGAACCTCTAAAAAGA 59.122 37.037 0.50 0.00 41.72 2.52
2652 5512 7.361286 GCAGTCCACATTAGAACCTCTAAAAAG 60.361 40.741 0.50 0.00 41.72 2.27
2653 5513 6.430000 GCAGTCCACATTAGAACCTCTAAAAA 59.570 38.462 0.50 0.00 41.72 1.94
2654 5514 5.938125 GCAGTCCACATTAGAACCTCTAAAA 59.062 40.000 0.50 0.00 41.72 1.52
2655 5515 5.012664 TGCAGTCCACATTAGAACCTCTAAA 59.987 40.000 0.50 0.00 41.72 1.85
2656 5516 4.530553 TGCAGTCCACATTAGAACCTCTAA 59.469 41.667 0.00 0.00 42.49 2.10
2657 5517 4.093743 TGCAGTCCACATTAGAACCTCTA 58.906 43.478 0.00 0.00 0.00 2.43
2658 5518 2.906389 TGCAGTCCACATTAGAACCTCT 59.094 45.455 0.00 0.00 0.00 3.69
2659 5519 3.334583 TGCAGTCCACATTAGAACCTC 57.665 47.619 0.00 0.00 0.00 3.85
2660 5520 4.680708 CGTATGCAGTCCACATTAGAACCT 60.681 45.833 0.00 0.00 0.00 3.50
2661 5521 3.555956 CGTATGCAGTCCACATTAGAACC 59.444 47.826 0.00 0.00 0.00 3.62
2662 5522 3.555956 CCGTATGCAGTCCACATTAGAAC 59.444 47.826 0.00 0.00 0.00 3.01
2663 5523 3.449377 TCCGTATGCAGTCCACATTAGAA 59.551 43.478 0.00 0.00 0.00 2.10
2664 5524 3.028130 TCCGTATGCAGTCCACATTAGA 58.972 45.455 0.00 0.00 0.00 2.10
2665 5525 3.181475 ACTCCGTATGCAGTCCACATTAG 60.181 47.826 0.00 0.00 0.00 1.73
2666 5526 2.764010 ACTCCGTATGCAGTCCACATTA 59.236 45.455 0.00 0.00 0.00 1.90
2667 5527 1.555075 ACTCCGTATGCAGTCCACATT 59.445 47.619 0.00 0.00 0.00 2.71
2668 5528 1.195115 ACTCCGTATGCAGTCCACAT 58.805 50.000 0.00 0.00 0.00 3.21
2669 5529 1.842052 TACTCCGTATGCAGTCCACA 58.158 50.000 0.00 0.00 0.00 4.17
2670 5530 2.953466 TTACTCCGTATGCAGTCCAC 57.047 50.000 0.00 0.00 0.00 4.02
2671 5531 3.965379 TTTTACTCCGTATGCAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
2672 5532 4.439057 TCATTTTACTCCGTATGCAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
2673 5533 5.005779 CACTCATTTTACTCCGTATGCAGTC 59.994 44.000 0.00 0.00 0.00 3.51
2674 5534 4.870426 CACTCATTTTACTCCGTATGCAGT 59.130 41.667 0.00 0.00 0.00 4.40
2675 5535 5.109210 TCACTCATTTTACTCCGTATGCAG 58.891 41.667 0.00 0.00 0.00 4.41
2676 5536 5.079689 TCACTCATTTTACTCCGTATGCA 57.920 39.130 0.00 0.00 0.00 3.96
2677 5537 6.480320 AGATTCACTCATTTTACTCCGTATGC 59.520 38.462 0.00 0.00 0.00 3.14
2678 5538 8.969267 GTAGATTCACTCATTTTACTCCGTATG 58.031 37.037 0.00 0.00 0.00 2.39
2679 5539 8.692710 TGTAGATTCACTCATTTTACTCCGTAT 58.307 33.333 0.00 0.00 0.00 3.06
2680 5540 7.972277 GTGTAGATTCACTCATTTTACTCCGTA 59.028 37.037 0.00 0.00 35.68 4.02
2681 5541 6.812160 GTGTAGATTCACTCATTTTACTCCGT 59.188 38.462 0.00 0.00 35.68 4.69
2682 5542 7.036220 AGTGTAGATTCACTCATTTTACTCCG 58.964 38.462 0.00 0.00 44.07 4.63
2728 5588 9.745880 GAGATTTCAATAAAGACTACATACGGA 57.254 33.333 0.00 0.00 0.00 4.69
2729 5589 9.751542 AGAGATTTCAATAAAGACTACATACGG 57.248 33.333 0.00 0.00 0.00 4.02
2756 5616 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
2757 5617 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
2758 5618 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
2759 5619 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2760 5620 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2761 5621 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2762 5622 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2763 5623 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2764 5624 7.951806 TGATACTCCCTCCGTTCCTAAATATAA 59.048 37.037 0.00 0.00 0.00 0.98
2765 5625 7.472741 TGATACTCCCTCCGTTCCTAAATATA 58.527 38.462 0.00 0.00 0.00 0.86
2766 5626 6.320518 TGATACTCCCTCCGTTCCTAAATAT 58.679 40.000 0.00 0.00 0.00 1.28
2767 5627 5.708544 TGATACTCCCTCCGTTCCTAAATA 58.291 41.667 0.00 0.00 0.00 1.40
2768 5628 4.553678 TGATACTCCCTCCGTTCCTAAAT 58.446 43.478 0.00 0.00 0.00 1.40
2769 5629 3.985127 TGATACTCCCTCCGTTCCTAAA 58.015 45.455 0.00 0.00 0.00 1.85
2770 5630 3.675348 TGATACTCCCTCCGTTCCTAA 57.325 47.619 0.00 0.00 0.00 2.69
2771 5631 3.497332 CATGATACTCCCTCCGTTCCTA 58.503 50.000 0.00 0.00 0.00 2.94
2772 5632 2.320781 CATGATACTCCCTCCGTTCCT 58.679 52.381 0.00 0.00 0.00 3.36
2773 5633 1.270358 GCATGATACTCCCTCCGTTCC 60.270 57.143 0.00 0.00 0.00 3.62
2774 5634 1.412710 TGCATGATACTCCCTCCGTTC 59.587 52.381 0.00 0.00 0.00 3.95
2775 5635 1.496060 TGCATGATACTCCCTCCGTT 58.504 50.000 0.00 0.00 0.00 4.44
2776 5636 1.345741 CATGCATGATACTCCCTCCGT 59.654 52.381 22.59 0.00 0.00 4.69
2777 5637 1.338484 CCATGCATGATACTCCCTCCG 60.338 57.143 28.31 2.48 0.00 4.63
2778 5638 1.612726 GCCATGCATGATACTCCCTCC 60.613 57.143 28.31 0.00 0.00 4.30
2779 5639 1.818642 GCCATGCATGATACTCCCTC 58.181 55.000 28.31 1.88 0.00 4.30
2780 5640 0.035881 CGCCATGCATGATACTCCCT 59.964 55.000 28.31 0.00 0.00 4.20
2781 5641 1.580845 GCGCCATGCATGATACTCCC 61.581 60.000 28.31 5.15 45.45 4.30
2782 5642 1.871772 GCGCCATGCATGATACTCC 59.128 57.895 28.31 7.64 45.45 3.85
2800 5660 5.997746 TGAACCATAAACAGAGACAGAAAGG 59.002 40.000 0.00 0.00 0.00 3.11
2909 5769 6.857956 AGCCGCACAACAAAAACATATAATA 58.142 32.000 0.00 0.00 0.00 0.98
2939 5804 4.420168 TGCTGTAAAAAGTCAACAAGTGC 58.580 39.130 0.00 0.00 0.00 4.40
2988 5853 1.337118 TGGGACAGGGAAAACATTGC 58.663 50.000 0.00 0.00 0.00 3.56
3082 5947 4.991776 TGAACCCAGTTCCATCAATGTTA 58.008 39.130 5.09 0.00 41.35 2.41
3155 6020 7.736447 AATACAGTGGAAACTGAAGAAGAAG 57.264 36.000 12.57 0.00 39.99 2.85
3195 6088 1.062587 CACTAGCCGCGAGAAAAATGG 59.937 52.381 8.23 0.00 0.00 3.16
3287 6180 6.642540 CACACAAGTATATGTCATATCACGCT 59.357 38.462 8.66 1.95 0.00 5.07
3288 6181 6.616471 GCACACAAGTATATGTCATATCACGC 60.616 42.308 8.66 0.00 0.00 5.34
3289 6182 6.420604 TGCACACAAGTATATGTCATATCACG 59.579 38.462 8.66 0.38 0.00 4.35
3290 6183 7.713764 TGCACACAAGTATATGTCATATCAC 57.286 36.000 8.66 6.50 0.00 3.06
3291 6184 8.776470 CAATGCACACAAGTATATGTCATATCA 58.224 33.333 8.66 0.00 0.00 2.15
3292 6185 8.777413 ACAATGCACACAAGTATATGTCATATC 58.223 33.333 8.66 2.18 0.00 1.63
3293 6186 8.681486 ACAATGCACACAAGTATATGTCATAT 57.319 30.769 10.20 10.20 0.00 1.78
3296 6189 6.876257 TGTACAATGCACACAAGTATATGTCA 59.124 34.615 0.00 0.00 0.00 3.58
3384 6277 0.600518 CATGCCTCGAGGAGCATCAG 60.601 60.000 35.69 15.90 46.58 2.90
3466 6359 6.308282 CAGTAACGACACTAGAAGATTGTTCC 59.692 42.308 0.00 0.00 0.00 3.62
3554 6447 1.241990 GCTCCGTTTCCCTTTCACCC 61.242 60.000 0.00 0.00 0.00 4.61
3576 6469 7.498900 TCGAAAGCACAAGTATGGATATGAAAT 59.501 33.333 0.00 0.00 0.00 2.17
3578 6471 6.345298 TCGAAAGCACAAGTATGGATATGAA 58.655 36.000 0.00 0.00 0.00 2.57
3579 6472 5.912892 TCGAAAGCACAAGTATGGATATGA 58.087 37.500 0.00 0.00 0.00 2.15
3609 6502 0.607489 CTTCTGGCACCAGGACAAGG 60.607 60.000 16.52 0.00 43.75 3.61
3754 6755 5.039920 ACTGCATACATGGCTAAGATCAA 57.960 39.130 0.00 0.00 0.00 2.57
3756 6757 4.623167 CGTACTGCATACATGGCTAAGATC 59.377 45.833 0.00 0.00 32.79 2.75
3757 6758 4.280929 TCGTACTGCATACATGGCTAAGAT 59.719 41.667 0.00 0.00 32.79 2.40
3763 6767 1.257936 CGTTCGTACTGCATACATGGC 59.742 52.381 0.00 0.00 32.79 4.40
3767 6771 1.175654 TCCCGTTCGTACTGCATACA 58.824 50.000 0.00 0.00 32.79 2.29
3814 6822 4.323477 TTTGCCCGGACCCGACAG 62.323 66.667 10.42 0.00 42.83 3.51
3817 6825 1.766625 TTTACTTTGCCCGGACCCGA 61.767 55.000 10.42 0.00 42.83 5.14
3820 6828 0.879090 CACTTTACTTTGCCCGGACC 59.121 55.000 0.73 0.00 0.00 4.46
3821 6829 0.879090 CCACTTTACTTTGCCCGGAC 59.121 55.000 0.73 0.00 0.00 4.79
3840 6849 3.621892 CTCCGGCTTGCTTGCTTGC 62.622 63.158 0.00 0.00 0.00 4.01
3841 6850 1.518056 TTCTCCGGCTTGCTTGCTTG 61.518 55.000 0.00 0.00 0.00 4.01
3842 6851 1.228245 TTCTCCGGCTTGCTTGCTT 60.228 52.632 0.00 0.00 0.00 3.91
3843 6852 1.968540 GTTCTCCGGCTTGCTTGCT 60.969 57.895 0.00 0.00 0.00 3.91
3844 6853 1.968540 AGTTCTCCGGCTTGCTTGC 60.969 57.895 0.00 0.00 0.00 4.01
3877 6886 5.351465 TGTCTGCTTACTAGTTGCAAATAGC 59.649 40.000 28.65 20.13 45.96 2.97
3889 6898 4.507710 CTGGCTCAATTGTCTGCTTACTA 58.492 43.478 5.13 0.00 0.00 1.82
3891 6900 2.159462 GCTGGCTCAATTGTCTGCTTAC 60.159 50.000 5.13 0.00 0.00 2.34
3892 6901 2.086869 GCTGGCTCAATTGTCTGCTTA 58.913 47.619 5.13 2.84 0.00 3.09
3893 6902 0.886563 GCTGGCTCAATTGTCTGCTT 59.113 50.000 5.13 0.00 0.00 3.91
3897 6916 0.251033 TGCTGCTGGCTCAATTGTCT 60.251 50.000 5.13 0.00 42.39 3.41
3965 6984 5.412594 GCATGATGACCAATATAATCGGTGT 59.587 40.000 0.00 0.00 31.63 4.16
4001 7020 0.755698 TCCTCCAGTCGGTATCAGCC 60.756 60.000 0.00 0.00 0.00 4.85
4002 7021 0.671251 CTCCTCCAGTCGGTATCAGC 59.329 60.000 0.00 0.00 0.00 4.26
4003 7022 1.950909 GTCTCCTCCAGTCGGTATCAG 59.049 57.143 0.00 0.00 0.00 2.90
4004 7023 1.409802 GGTCTCCTCCAGTCGGTATCA 60.410 57.143 0.00 0.00 0.00 2.15
4005 7024 1.320507 GGTCTCCTCCAGTCGGTATC 58.679 60.000 0.00 0.00 0.00 2.24
4006 7025 0.106116 GGGTCTCCTCCAGTCGGTAT 60.106 60.000 0.00 0.00 0.00 2.73
4007 7026 1.305623 GGGTCTCCTCCAGTCGGTA 59.694 63.158 0.00 0.00 0.00 4.02
4008 7027 2.037527 GGGTCTCCTCCAGTCGGT 59.962 66.667 0.00 0.00 0.00 4.69
4010 7029 3.141488 CCGGGTCTCCTCCAGTCG 61.141 72.222 0.00 0.00 0.00 4.18
4012 7031 2.360980 CTCCGGGTCTCCTCCAGT 59.639 66.667 0.00 0.00 0.00 4.00
4013 7032 2.443016 CCTCCGGGTCTCCTCCAG 60.443 72.222 0.00 0.00 0.00 3.86
4014 7033 2.944954 TCCTCCGGGTCTCCTCCA 60.945 66.667 0.00 0.00 0.00 3.86
4046 7068 4.332819 GTGTCTAAACTGATGTACATGCCC 59.667 45.833 14.43 0.00 0.00 5.36
4047 7069 5.178797 AGTGTCTAAACTGATGTACATGCC 58.821 41.667 14.43 0.00 0.00 4.40
4059 7081 7.766278 GTGGATGATCATTACAGTGTCTAAACT 59.234 37.037 10.14 0.00 0.00 2.66
4060 7082 7.254117 CGTGGATGATCATTACAGTGTCTAAAC 60.254 40.741 10.14 0.00 0.00 2.01
4061 7083 6.756542 CGTGGATGATCATTACAGTGTCTAAA 59.243 38.462 10.14 0.00 0.00 1.85
4062 7084 6.127451 ACGTGGATGATCATTACAGTGTCTAA 60.127 38.462 10.14 0.00 0.00 2.10
4063 7085 5.359860 ACGTGGATGATCATTACAGTGTCTA 59.640 40.000 10.14 0.00 0.00 2.59
4064 7086 4.160439 ACGTGGATGATCATTACAGTGTCT 59.840 41.667 10.14 0.00 0.00 3.41
4065 7087 4.433615 ACGTGGATGATCATTACAGTGTC 58.566 43.478 10.14 0.00 0.00 3.67
4066 7088 4.081697 TGACGTGGATGATCATTACAGTGT 60.082 41.667 10.14 12.67 0.00 3.55
4067 7089 4.432712 TGACGTGGATGATCATTACAGTG 58.567 43.478 10.14 9.95 0.00 3.66
4068 7090 4.736126 TGACGTGGATGATCATTACAGT 57.264 40.909 10.14 13.24 0.00 3.55
4069 7091 5.536260 AGATGACGTGGATGATCATTACAG 58.464 41.667 10.14 10.66 33.21 2.74
4070 7092 5.535753 AGATGACGTGGATGATCATTACA 57.464 39.130 10.14 9.62 33.21 2.41
4071 7093 8.678199 TCTATAGATGACGTGGATGATCATTAC 58.322 37.037 10.14 11.20 33.21 1.89
4072 7094 8.678199 GTCTATAGATGACGTGGATGATCATTA 58.322 37.037 10.14 0.00 33.21 1.90
4073 7095 7.177392 TGTCTATAGATGACGTGGATGATCATT 59.823 37.037 10.14 0.00 37.26 2.57
4074 7096 6.660949 TGTCTATAGATGACGTGGATGATCAT 59.339 38.462 8.25 8.25 37.26 2.45
4075 7097 6.003950 TGTCTATAGATGACGTGGATGATCA 58.996 40.000 5.57 0.00 37.26 2.92
4076 7098 6.502136 TGTCTATAGATGACGTGGATGATC 57.498 41.667 5.57 0.00 37.26 2.92
4077 7099 5.105957 GCTGTCTATAGATGACGTGGATGAT 60.106 44.000 5.57 0.00 37.26 2.45
4078 7100 4.216472 GCTGTCTATAGATGACGTGGATGA 59.784 45.833 5.57 0.00 37.26 2.92
4079 7101 4.022849 TGCTGTCTATAGATGACGTGGATG 60.023 45.833 5.57 0.00 37.26 3.51
4080 7102 4.145052 TGCTGTCTATAGATGACGTGGAT 58.855 43.478 5.57 0.00 37.26 3.41
4081 7103 3.551846 TGCTGTCTATAGATGACGTGGA 58.448 45.455 5.57 0.00 37.26 4.02
4082 7104 3.316588 ACTGCTGTCTATAGATGACGTGG 59.683 47.826 5.57 0.00 37.26 4.94
4083 7105 4.560136 ACTGCTGTCTATAGATGACGTG 57.440 45.455 5.57 0.00 37.26 4.49
4084 7106 6.694877 TTTACTGCTGTCTATAGATGACGT 57.305 37.500 5.57 0.00 37.26 4.34
4085 7107 7.488150 TGTTTTTACTGCTGTCTATAGATGACG 59.512 37.037 5.57 0.00 37.26 4.35
4086 7108 8.703604 TGTTTTTACTGCTGTCTATAGATGAC 57.296 34.615 5.57 0.00 35.21 3.06
4087 7109 9.534565 GATGTTTTTACTGCTGTCTATAGATGA 57.465 33.333 5.57 0.00 0.00 2.92
4088 7110 9.317936 TGATGTTTTTACTGCTGTCTATAGATG 57.682 33.333 5.57 3.71 0.00 2.90
4090 7112 9.534565 GATGATGTTTTTACTGCTGTCTATAGA 57.465 33.333 0.00 0.00 0.00 1.98
4091 7113 9.539825 AGATGATGTTTTTACTGCTGTCTATAG 57.460 33.333 0.00 0.00 0.00 1.31
4093 7115 9.319143 GTAGATGATGTTTTTACTGCTGTCTAT 57.681 33.333 0.00 0.00 0.00 1.98
4094 7116 8.311109 TGTAGATGATGTTTTTACTGCTGTCTA 58.689 33.333 0.00 0.00 0.00 2.59
4095 7117 7.161404 TGTAGATGATGTTTTTACTGCTGTCT 58.839 34.615 0.00 0.00 0.00 3.41
4096 7118 7.364522 TGTAGATGATGTTTTTACTGCTGTC 57.635 36.000 0.00 0.00 0.00 3.51
4097 7119 7.744087 TTGTAGATGATGTTTTTACTGCTGT 57.256 32.000 0.66 0.66 0.00 4.40
4098 7120 9.926751 CTATTGTAGATGATGTTTTTACTGCTG 57.073 33.333 0.00 0.00 0.00 4.41
4099 7121 9.672673 ACTATTGTAGATGATGTTTTTACTGCT 57.327 29.630 0.00 0.00 0.00 4.24
4100 7122 9.922305 GACTATTGTAGATGATGTTTTTACTGC 57.078 33.333 0.00 0.00 0.00 4.40
4103 7125 9.922305 GCAGACTATTGTAGATGATGTTTTTAC 57.078 33.333 0.00 0.00 0.00 2.01
4104 7126 9.890629 AGCAGACTATTGTAGATGATGTTTTTA 57.109 29.630 0.00 0.00 0.00 1.52
4105 7127 8.798859 AGCAGACTATTGTAGATGATGTTTTT 57.201 30.769 0.00 0.00 0.00 1.94
4106 7128 8.798859 AAGCAGACTATTGTAGATGATGTTTT 57.201 30.769 0.00 0.00 0.00 2.43
4107 7129 8.798859 AAAGCAGACTATTGTAGATGATGTTT 57.201 30.769 0.00 0.00 0.00 2.83
4108 7130 8.798859 AAAAGCAGACTATTGTAGATGATGTT 57.201 30.769 0.00 0.00 0.00 2.71
4109 7131 8.798859 AAAAAGCAGACTATTGTAGATGATGT 57.201 30.769 0.00 0.00 0.00 3.06
4137 7159 2.922384 CGATCCACGTGCTACAGATAG 58.078 52.381 10.91 3.84 37.22 2.08
4139 7161 3.946950 CGATCCACGTGCTACAGAT 57.053 52.632 10.91 7.01 37.22 2.90
4150 7172 2.125106 GGTCTGCCCACGATCCAC 60.125 66.667 0.00 0.00 0.00 4.02
4151 7173 3.770040 CGGTCTGCCCACGATCCA 61.770 66.667 0.00 0.00 0.00 3.41
4162 7184 2.046023 TTCCCATGCAGCGGTCTG 60.046 61.111 4.37 0.00 43.16 3.51
4163 7185 2.045926 GTTCCCATGCAGCGGTCT 60.046 61.111 4.37 0.00 0.00 3.85
4164 7186 3.134127 GGTTCCCATGCAGCGGTC 61.134 66.667 4.37 0.00 0.00 4.79
4165 7187 3.628646 GAGGTTCCCATGCAGCGGT 62.629 63.158 4.37 0.00 0.00 5.68
4166 7188 1.971505 TAGAGGTTCCCATGCAGCGG 61.972 60.000 0.00 0.00 0.00 5.52
4167 7189 0.107456 ATAGAGGTTCCCATGCAGCG 59.893 55.000 0.00 0.00 0.00 5.18
4168 7190 1.419387 AGATAGAGGTTCCCATGCAGC 59.581 52.381 0.00 0.00 0.00 5.25
4169 7191 3.853355 AAGATAGAGGTTCCCATGCAG 57.147 47.619 0.00 0.00 0.00 4.41
4170 7192 3.432186 CGAAAGATAGAGGTTCCCATGCA 60.432 47.826 0.00 0.00 0.00 3.96
4171 7193 3.134458 CGAAAGATAGAGGTTCCCATGC 58.866 50.000 0.00 0.00 0.00 4.06
4172 7194 4.408182 ACGAAAGATAGAGGTTCCCATG 57.592 45.455 0.00 0.00 0.00 3.66
4173 7195 4.225267 ACAACGAAAGATAGAGGTTCCCAT 59.775 41.667 0.00 0.00 0.00 4.00
4174 7196 3.581332 ACAACGAAAGATAGAGGTTCCCA 59.419 43.478 0.00 0.00 0.00 4.37
4175 7197 4.203654 ACAACGAAAGATAGAGGTTCCC 57.796 45.455 0.00 0.00 0.00 3.97
4176 7198 5.963594 AGTACAACGAAAGATAGAGGTTCC 58.036 41.667 0.00 0.00 0.00 3.62
4177 7199 7.314393 AGAAGTACAACGAAAGATAGAGGTTC 58.686 38.462 0.00 0.00 0.00 3.62
4178 7200 7.229581 AGAAGTACAACGAAAGATAGAGGTT 57.770 36.000 0.00 0.00 0.00 3.50
4179 7201 6.837471 AGAAGTACAACGAAAGATAGAGGT 57.163 37.500 0.00 0.00 0.00 3.85
4180 7202 6.035112 GCAAGAAGTACAACGAAAGATAGAGG 59.965 42.308 0.00 0.00 0.00 3.69
4181 7203 6.035112 GGCAAGAAGTACAACGAAAGATAGAG 59.965 42.308 0.00 0.00 0.00 2.43
4182 7204 5.867716 GGCAAGAAGTACAACGAAAGATAGA 59.132 40.000 0.00 0.00 0.00 1.98
4183 7205 5.063564 GGGCAAGAAGTACAACGAAAGATAG 59.936 44.000 0.00 0.00 0.00 2.08
4184 7206 4.933400 GGGCAAGAAGTACAACGAAAGATA 59.067 41.667 0.00 0.00 0.00 1.98
4185 7207 3.751698 GGGCAAGAAGTACAACGAAAGAT 59.248 43.478 0.00 0.00 0.00 2.40
4186 7208 3.135994 GGGCAAGAAGTACAACGAAAGA 58.864 45.455 0.00 0.00 0.00 2.52
4187 7209 2.875933 TGGGCAAGAAGTACAACGAAAG 59.124 45.455 0.00 0.00 0.00 2.62
4188 7210 2.875933 CTGGGCAAGAAGTACAACGAAA 59.124 45.455 0.00 0.00 0.00 3.46
4189 7211 2.103432 TCTGGGCAAGAAGTACAACGAA 59.897 45.455 0.00 0.00 29.54 3.85
4190 7212 1.689813 TCTGGGCAAGAAGTACAACGA 59.310 47.619 0.00 0.00 29.54 3.85
4191 7213 2.163818 TCTGGGCAAGAAGTACAACG 57.836 50.000 0.00 0.00 29.54 4.10
4192 7214 2.223377 CGTTCTGGGCAAGAAGTACAAC 59.777 50.000 4.08 0.00 45.69 3.32
4193 7215 2.158871 ACGTTCTGGGCAAGAAGTACAA 60.159 45.455 4.08 0.00 45.69 2.41
4194 7216 1.414919 ACGTTCTGGGCAAGAAGTACA 59.585 47.619 4.08 0.00 45.69 2.90
4195 7217 1.798813 CACGTTCTGGGCAAGAAGTAC 59.201 52.381 4.08 0.00 45.69 2.73
4196 7218 1.270625 CCACGTTCTGGGCAAGAAGTA 60.271 52.381 4.08 0.00 45.69 2.24
4197 7219 0.535102 CCACGTTCTGGGCAAGAAGT 60.535 55.000 4.08 2.90 45.69 3.01
4198 7220 2.247790 CCACGTTCTGGGCAAGAAG 58.752 57.895 4.08 2.26 45.69 2.85
4199 7221 4.473643 CCACGTTCTGGGCAAGAA 57.526 55.556 0.00 0.00 42.83 2.52
4206 7228 1.003355 ATCAGTGCCCACGTTCTGG 60.003 57.895 0.00 0.00 40.26 3.86
4207 7229 1.915614 GCATCAGTGCCCACGTTCTG 61.916 60.000 0.00 0.00 45.76 3.02
4208 7230 1.672356 GCATCAGTGCCCACGTTCT 60.672 57.895 0.00 0.00 45.76 3.01
4209 7231 2.870372 GCATCAGTGCCCACGTTC 59.130 61.111 0.00 0.00 45.76 3.95
4218 7240 1.074319 GCGGTTTGCATGCATCAGTG 61.074 55.000 23.37 11.78 45.45 3.66
4219 7241 1.213537 GCGGTTTGCATGCATCAGT 59.786 52.632 23.37 0.00 45.45 3.41
4220 7242 4.082192 GCGGTTTGCATGCATCAG 57.918 55.556 23.37 18.23 45.45 2.90
4229 7251 1.391787 GTCGTTAGTTTGCGGTTTGC 58.608 50.000 0.00 0.00 46.70 3.68
4230 7252 1.654463 CGTCGTTAGTTTGCGGTTTG 58.346 50.000 0.00 0.00 0.00 2.93
4231 7253 0.041926 GCGTCGTTAGTTTGCGGTTT 60.042 50.000 0.00 0.00 0.00 3.27
4232 7254 1.566077 GCGTCGTTAGTTTGCGGTT 59.434 52.632 0.00 0.00 0.00 4.44
4233 7255 2.312436 GGCGTCGTTAGTTTGCGGT 61.312 57.895 0.00 0.00 0.00 5.68
4234 7256 2.025418 AGGCGTCGTTAGTTTGCGG 61.025 57.895 0.00 0.00 0.00 5.69
4235 7257 1.129809 CAGGCGTCGTTAGTTTGCG 59.870 57.895 0.00 0.00 0.00 4.85
4236 7258 0.438830 CTCAGGCGTCGTTAGTTTGC 59.561 55.000 0.00 0.00 0.00 3.68
4237 7259 0.438830 GCTCAGGCGTCGTTAGTTTG 59.561 55.000 0.00 0.00 0.00 2.93
4238 7260 2.823628 GCTCAGGCGTCGTTAGTTT 58.176 52.632 0.00 0.00 0.00 2.66
4239 7261 4.573162 GCTCAGGCGTCGTTAGTT 57.427 55.556 0.00 0.00 0.00 2.24
4249 7271 2.813908 CCCGTTGTACGCTCAGGC 60.814 66.667 0.00 0.00 40.91 4.85
4250 7272 2.125673 CCCCGTTGTACGCTCAGG 60.126 66.667 0.00 0.00 40.91 3.86
4251 7273 1.153823 CTCCCCGTTGTACGCTCAG 60.154 63.158 0.00 0.00 40.91 3.35
4252 7274 2.642254 CCTCCCCGTTGTACGCTCA 61.642 63.158 0.00 0.00 40.91 4.26
4253 7275 1.673808 ATCCTCCCCGTTGTACGCTC 61.674 60.000 0.00 0.00 40.91 5.03
4254 7276 0.396139 TATCCTCCCCGTTGTACGCT 60.396 55.000 0.00 0.00 40.91 5.07
4255 7277 0.677842 ATATCCTCCCCGTTGTACGC 59.322 55.000 0.00 0.00 40.91 4.42
4256 7278 1.068748 CGATATCCTCCCCGTTGTACG 60.069 57.143 0.00 0.00 42.11 3.67
4257 7279 2.030451 GTCGATATCCTCCCCGTTGTAC 60.030 54.545 0.00 0.00 0.00 2.90
4258 7280 2.233271 GTCGATATCCTCCCCGTTGTA 58.767 52.381 0.00 0.00 0.00 2.41
4259 7281 1.038280 GTCGATATCCTCCCCGTTGT 58.962 55.000 0.00 0.00 0.00 3.32
4260 7282 0.317479 GGTCGATATCCTCCCCGTTG 59.683 60.000 0.00 0.00 0.00 4.10
4261 7283 1.177256 CGGTCGATATCCTCCCCGTT 61.177 60.000 0.00 0.00 32.76 4.44
4262 7284 1.602888 CGGTCGATATCCTCCCCGT 60.603 63.158 0.00 0.00 32.76 5.28
4263 7285 1.584380 GACGGTCGATATCCTCCCCG 61.584 65.000 12.72 12.72 39.56 5.73
4264 7286 0.251253 AGACGGTCGATATCCTCCCC 60.251 60.000 1.89 0.00 0.00 4.81
4265 7287 0.882474 CAGACGGTCGATATCCTCCC 59.118 60.000 1.89 0.00 0.00 4.30
4266 7288 0.241481 GCAGACGGTCGATATCCTCC 59.759 60.000 1.89 0.00 0.00 4.30
4267 7289 0.952280 TGCAGACGGTCGATATCCTC 59.048 55.000 1.89 0.00 0.00 3.71
4268 7290 1.399714 TTGCAGACGGTCGATATCCT 58.600 50.000 1.89 0.00 0.00 3.24
4269 7291 2.218953 TTTGCAGACGGTCGATATCC 57.781 50.000 1.89 0.00 0.00 2.59
4270 7292 4.795970 AATTTTGCAGACGGTCGATATC 57.204 40.909 1.89 0.00 0.00 1.63
4271 7293 5.276678 CGTTAATTTTGCAGACGGTCGATAT 60.277 40.000 1.89 0.00 0.00 1.63
4272 7294 4.031991 CGTTAATTTTGCAGACGGTCGATA 59.968 41.667 1.89 0.00 0.00 2.92
4273 7295 3.181524 CGTTAATTTTGCAGACGGTCGAT 60.182 43.478 1.89 0.00 0.00 3.59
4274 7296 2.156117 CGTTAATTTTGCAGACGGTCGA 59.844 45.455 1.89 0.00 0.00 4.20
4275 7297 2.156117 TCGTTAATTTTGCAGACGGTCG 59.844 45.455 1.89 0.00 34.72 4.79
4276 7298 3.059461 TGTCGTTAATTTTGCAGACGGTC 60.059 43.478 0.00 0.00 34.72 4.79
4277 7299 2.873472 TGTCGTTAATTTTGCAGACGGT 59.127 40.909 0.00 0.00 34.72 4.83
4278 7300 3.223157 GTGTCGTTAATTTTGCAGACGG 58.777 45.455 0.00 0.00 34.72 4.79
4279 7301 3.223157 GGTGTCGTTAATTTTGCAGACG 58.777 45.455 0.00 0.00 35.24 4.18
4280 7302 3.252458 AGGGTGTCGTTAATTTTGCAGAC 59.748 43.478 0.00 0.00 0.00 3.51
4281 7303 3.482436 AGGGTGTCGTTAATTTTGCAGA 58.518 40.909 0.00 0.00 0.00 4.26
4282 7304 3.666902 CGAGGGTGTCGTTAATTTTGCAG 60.667 47.826 0.00 0.00 44.20 4.41
4283 7305 2.224549 CGAGGGTGTCGTTAATTTTGCA 59.775 45.455 0.00 0.00 44.20 4.08
4284 7306 2.846693 CGAGGGTGTCGTTAATTTTGC 58.153 47.619 0.00 0.00 44.20 3.68
4295 7317 1.033202 GGAGAGAGACCGAGGGTGTC 61.033 65.000 3.90 3.90 44.96 3.67
4296 7318 1.000646 GGAGAGAGACCGAGGGTGT 60.001 63.158 0.00 0.00 35.25 4.16
4297 7319 0.547075 TAGGAGAGAGACCGAGGGTG 59.453 60.000 0.00 0.00 35.25 4.61
4298 7320 0.841289 CTAGGAGAGAGACCGAGGGT 59.159 60.000 0.00 0.00 39.44 4.34
4299 7321 0.536460 GCTAGGAGAGAGACCGAGGG 60.536 65.000 0.00 0.00 32.25 4.30
4300 7322 0.472471 AGCTAGGAGAGAGACCGAGG 59.528 60.000 0.00 0.00 32.25 4.63
4301 7323 1.416401 AGAGCTAGGAGAGAGACCGAG 59.584 57.143 0.00 0.00 34.19 4.63
4302 7324 1.414919 GAGAGCTAGGAGAGAGACCGA 59.585 57.143 0.00 0.00 0.00 4.69
4303 7325 1.416401 AGAGAGCTAGGAGAGAGACCG 59.584 57.143 0.00 0.00 0.00 4.79
4304 7326 2.706190 AGAGAGAGCTAGGAGAGAGACC 59.294 54.545 0.00 0.00 0.00 3.85
4305 7327 3.244249 GGAGAGAGAGCTAGGAGAGAGAC 60.244 56.522 0.00 0.00 0.00 3.36
4306 7328 2.972713 GGAGAGAGAGCTAGGAGAGAGA 59.027 54.545 0.00 0.00 0.00 3.10
4307 7329 2.975489 AGGAGAGAGAGCTAGGAGAGAG 59.025 54.545 0.00 0.00 0.00 3.20
4308 7330 2.972713 GAGGAGAGAGAGCTAGGAGAGA 59.027 54.545 0.00 0.00 0.00 3.10
4309 7331 2.039084 GGAGGAGAGAGAGCTAGGAGAG 59.961 59.091 0.00 0.00 0.00 3.20
4310 7332 2.054799 GGAGGAGAGAGAGCTAGGAGA 58.945 57.143 0.00 0.00 0.00 3.71
4311 7333 1.774254 TGGAGGAGAGAGAGCTAGGAG 59.226 57.143 0.00 0.00 0.00 3.69
4312 7334 1.900254 TGGAGGAGAGAGAGCTAGGA 58.100 55.000 0.00 0.00 0.00 2.94
4313 7335 2.158475 ACATGGAGGAGAGAGAGCTAGG 60.158 54.545 0.00 0.00 0.00 3.02
4314 7336 3.228188 ACATGGAGGAGAGAGAGCTAG 57.772 52.381 0.00 0.00 0.00 3.42
4315 7337 4.797912 TTACATGGAGGAGAGAGAGCTA 57.202 45.455 0.00 0.00 0.00 3.32
4316 7338 3.678965 TTACATGGAGGAGAGAGAGCT 57.321 47.619 0.00 0.00 0.00 4.09
4317 7339 3.894427 TCATTACATGGAGGAGAGAGAGC 59.106 47.826 0.00 0.00 0.00 4.09
4318 7340 6.477053 TTTCATTACATGGAGGAGAGAGAG 57.523 41.667 0.00 0.00 0.00 3.20
4319 7341 6.874278 TTTTCATTACATGGAGGAGAGAGA 57.126 37.500 0.00 0.00 0.00 3.10
4320 7342 7.992033 AGATTTTTCATTACATGGAGGAGAGAG 59.008 37.037 0.00 0.00 0.00 3.20
4321 7343 7.772292 CAGATTTTTCATTACATGGAGGAGAGA 59.228 37.037 0.00 0.00 0.00 3.10
4322 7344 7.772292 TCAGATTTTTCATTACATGGAGGAGAG 59.228 37.037 0.00 0.00 0.00 3.20
4323 7345 7.632861 TCAGATTTTTCATTACATGGAGGAGA 58.367 34.615 0.00 0.00 0.00 3.71
4324 7346 7.013083 CCTCAGATTTTTCATTACATGGAGGAG 59.987 40.741 0.00 0.00 39.42 3.69
4325 7347 6.830324 CCTCAGATTTTTCATTACATGGAGGA 59.170 38.462 0.00 0.00 39.42 3.71
4326 7348 6.604795 ACCTCAGATTTTTCATTACATGGAGG 59.395 38.462 0.00 0.00 42.02 4.30
4327 7349 7.415989 CCACCTCAGATTTTTCATTACATGGAG 60.416 40.741 0.00 0.00 0.00 3.86
4328 7350 6.377996 CCACCTCAGATTTTTCATTACATGGA 59.622 38.462 0.00 0.00 0.00 3.41
4329 7351 6.567050 CCACCTCAGATTTTTCATTACATGG 58.433 40.000 0.00 0.00 0.00 3.66
4330 7352 6.038356 GCCACCTCAGATTTTTCATTACATG 58.962 40.000 0.00 0.00 0.00 3.21
4331 7353 5.716228 TGCCACCTCAGATTTTTCATTACAT 59.284 36.000 0.00 0.00 0.00 2.29
4332 7354 5.076182 TGCCACCTCAGATTTTTCATTACA 58.924 37.500 0.00 0.00 0.00 2.41
4333 7355 5.643379 TGCCACCTCAGATTTTTCATTAC 57.357 39.130 0.00 0.00 0.00 1.89
4334 7356 6.038161 CGTATGCCACCTCAGATTTTTCATTA 59.962 38.462 0.00 0.00 0.00 1.90
4335 7357 5.163622 CGTATGCCACCTCAGATTTTTCATT 60.164 40.000 0.00 0.00 0.00 2.57
4336 7358 4.336433 CGTATGCCACCTCAGATTTTTCAT 59.664 41.667 0.00 0.00 0.00 2.57
4337 7359 3.689161 CGTATGCCACCTCAGATTTTTCA 59.311 43.478 0.00 0.00 0.00 2.69
4338 7360 3.689649 ACGTATGCCACCTCAGATTTTTC 59.310 43.478 0.00 0.00 0.00 2.29
4339 7361 3.686016 ACGTATGCCACCTCAGATTTTT 58.314 40.909 0.00 0.00 0.00 1.94
4340 7362 3.350219 ACGTATGCCACCTCAGATTTT 57.650 42.857 0.00 0.00 0.00 1.82
4341 7363 3.350219 AACGTATGCCACCTCAGATTT 57.650 42.857 0.00 0.00 0.00 2.17
4342 7364 4.689612 ATAACGTATGCCACCTCAGATT 57.310 40.909 0.00 0.00 0.00 2.40
4343 7365 5.047943 GTCTATAACGTATGCCACCTCAGAT 60.048 44.000 0.00 0.00 0.00 2.90
4344 7366 4.277672 GTCTATAACGTATGCCACCTCAGA 59.722 45.833 0.00 0.00 0.00 3.27
4345 7367 4.547532 GTCTATAACGTATGCCACCTCAG 58.452 47.826 0.00 0.00 0.00 3.35
4346 7368 3.004002 CGTCTATAACGTATGCCACCTCA 59.996 47.826 0.00 0.00 46.42 3.86
4347 7369 3.562505 CGTCTATAACGTATGCCACCTC 58.437 50.000 0.00 0.00 46.42 3.85
4348 7370 3.637998 CGTCTATAACGTATGCCACCT 57.362 47.619 0.00 0.00 46.42 4.00
4359 7381 5.345202 CGGCATCTAATCAACCGTCTATAAC 59.655 44.000 0.00 0.00 39.05 1.89
4360 7382 5.466819 CGGCATCTAATCAACCGTCTATAA 58.533 41.667 0.00 0.00 39.05 0.98
4361 7383 5.055642 CGGCATCTAATCAACCGTCTATA 57.944 43.478 0.00 0.00 39.05 1.31
4362 7384 3.914312 CGGCATCTAATCAACCGTCTAT 58.086 45.455 0.00 0.00 39.05 1.98
4363 7385 3.364889 CGGCATCTAATCAACCGTCTA 57.635 47.619 0.00 0.00 39.05 2.59
4364 7386 2.225068 CGGCATCTAATCAACCGTCT 57.775 50.000 0.00 0.00 39.05 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.