Multiple sequence alignment - TraesCS1D01G222300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G222300 chr1D 100.000 6770 0 0 1 6770 309982348 309975579 0.000000e+00 12502.0
1 TraesCS1D01G222300 chr1D 92.308 533 22 4 6246 6760 208753858 208753327 0.000000e+00 739.0
2 TraesCS1D01G222300 chr1D 80.386 311 31 20 1068 1352 36320164 36320470 6.880000e-50 209.0
3 TraesCS1D01G222300 chr1D 83.756 197 25 5 1198 1392 450714469 450714660 5.390000e-41 180.0
4 TraesCS1D01G222300 chr1D 92.308 78 4 2 1585 1660 36321132 36321209 7.180000e-20 110.0
5 TraesCS1D01G222300 chr1A 91.433 1856 90 22 2935 4769 389826263 389824456 0.000000e+00 2483.0
6 TraesCS1D01G222300 chr1A 89.122 1287 50 35 4887 6139 389824311 389823081 0.000000e+00 1519.0
7 TraesCS1D01G222300 chr1A 85.506 959 73 31 1 931 389829050 389828130 0.000000e+00 941.0
8 TraesCS1D01G222300 chr1A 86.447 819 66 29 1671 2449 389827978 389827165 0.000000e+00 856.0
9 TraesCS1D01G222300 chr1A 84.440 527 44 17 2450 2938 389826818 389826292 1.020000e-132 484.0
10 TraesCS1D01G222300 chr1A 80.195 308 34 14 1068 1352 435405589 435405892 8.900000e-49 206.0
11 TraesCS1D01G222300 chr1A 91.216 148 10 3 1512 1657 466137261 466137115 1.490000e-46 198.0
12 TraesCS1D01G222300 chr1A 92.857 56 4 0 1586 1641 435409712 435409767 1.560000e-11 82.4
13 TraesCS1D01G222300 chr3A 93.548 1395 56 13 3385 4769 128560199 128561569 0.000000e+00 2047.0
14 TraesCS1D01G222300 chr3A 90.562 943 37 21 4887 5810 128561714 128562623 0.000000e+00 1201.0
15 TraesCS1D01G222300 chr3A 88.996 727 55 18 287 1010 128551235 128550531 0.000000e+00 876.0
16 TraesCS1D01G222300 chr3A 84.684 790 90 17 1671 2449 128550451 128549682 0.000000e+00 760.0
17 TraesCS1D01G222300 chr3A 87.636 461 40 13 433 892 128551262 128551706 2.800000e-143 520.0
18 TraesCS1D01G222300 chr3A 88.276 435 35 10 2935 3366 128548782 128548361 2.180000e-139 507.0
19 TraesCS1D01G222300 chr3A 88.276 435 35 10 2935 3366 128558411 128558832 2.180000e-139 507.0
20 TraesCS1D01G222300 chr3A 83.217 572 66 16 1671 2232 128556776 128557327 1.310000e-136 497.0
21 TraesCS1D01G222300 chr3A 84.848 528 38 19 2450 2935 128557852 128558379 1.700000e-135 494.0
22 TraesCS1D01G222300 chr3A 89.702 369 29 2 2450 2812 128549338 128548973 4.780000e-126 462.0
23 TraesCS1D01G222300 chr3A 82.231 484 77 9 6264 6746 647501061 647500586 6.320000e-110 409.0
24 TraesCS1D01G222300 chr3A 93.173 249 12 4 1 245 128544588 128544835 1.790000e-95 361.0
25 TraesCS1D01G222300 chr3A 87.538 329 20 12 5810 6130 128562654 128562969 1.790000e-95 361.0
26 TraesCS1D01G222300 chr3A 89.143 175 18 1 2276 2449 128557334 128557508 4.110000e-52 217.0
27 TraesCS1D01G222300 chr3A 91.791 134 9 2 888 1020 128556573 128556705 1.160000e-42 185.0
28 TraesCS1D01G222300 chr1B 90.283 1307 61 30 4887 6144 419982167 419983456 0.000000e+00 1650.0
29 TraesCS1D01G222300 chr1B 90.973 1130 76 16 2949 4073 419978302 419979410 0.000000e+00 1498.0
30 TraesCS1D01G222300 chr1B 86.776 1036 56 31 1 1001 419973402 419974391 0.000000e+00 1079.0
31 TraesCS1D01G222300 chr1B 87.732 807 64 21 1671 2449 419975468 419976267 0.000000e+00 909.0
32 TraesCS1D01G222300 chr1B 86.747 415 44 5 4196 4603 419979446 419979856 1.040000e-122 451.0
33 TraesCS1D01G222300 chr1B 82.143 504 79 10 6245 6746 595040971 595040477 8.120000e-114 422.0
34 TraesCS1D01G222300 chr1B 87.879 165 20 0 4601 4765 419981794 419981958 1.930000e-45 195.0
35 TraesCS1D01G222300 chr1B 84.343 198 20 6 1218 1414 484886445 484886632 4.170000e-42 183.0
36 TraesCS1D01G222300 chr1B 89.116 147 13 3 1512 1657 428272 428416 5.390000e-41 180.0
37 TraesCS1D01G222300 chr1B 89.116 147 13 3 1512 1657 435397 435541 5.390000e-41 180.0
38 TraesCS1D01G222300 chr1B 95.652 69 2 1 2267 2334 496801099 496801031 7.180000e-20 110.0
39 TraesCS1D01G222300 chr1B 88.235 85 10 0 1585 1669 439526678 439526594 1.200000e-17 102.0
40 TraesCS1D01G222300 chr1B 86.022 93 13 0 2658 2750 40946237 40946145 4.320000e-17 100.0
41 TraesCS1D01G222300 chr1B 96.610 59 2 0 2549 2607 419978183 419978241 1.550000e-16 99.0
42 TraesCS1D01G222300 chr1B 100.000 31 0 0 2504 2534 419976746 419976776 2.640000e-04 58.4
43 TraesCS1D01G222300 chr7B 92.943 666 33 4 1017 1670 452175570 452176233 0.000000e+00 957.0
44 TraesCS1D01G222300 chr7B 82.464 211 30 5 1198 1406 239168816 239169021 1.940000e-40 178.0
45 TraesCS1D01G222300 chr4D 88.797 482 26 11 6245 6708 306374183 306374654 3.540000e-157 566.0
46 TraesCS1D01G222300 chr4B 86.940 513 48 6 1016 1512 364360832 364360323 5.930000e-155 558.0
47 TraesCS1D01G222300 chr4B 92.683 41 2 1 1315 1355 14490645 14490606 2.640000e-04 58.4
48 TraesCS1D01G222300 chr6D 88.914 442 30 12 6245 6667 156568364 156568805 1.670000e-145 527.0
49 TraesCS1D01G222300 chr6D 84.294 503 69 8 6245 6746 391684192 391684685 3.670000e-132 483.0
50 TraesCS1D01G222300 chr5D 86.635 419 50 5 6246 6663 106803981 106804394 6.190000e-125 459.0
51 TraesCS1D01G222300 chr5D 85.256 468 42 11 1070 1511 162654178 162653712 2.230000e-124 457.0
52 TraesCS1D01G222300 chr5D 88.750 320 28 5 1199 1512 162507006 162506689 1.070000e-102 385.0
53 TraesCS1D01G222300 chr5D 90.385 156 10 3 5320 5470 384741941 384742096 4.140000e-47 200.0
54 TraesCS1D01G222300 chr5D 89.583 48 5 0 5508 5555 384742152 384742199 2.040000e-05 62.1
55 TraesCS1D01G222300 chr7D 81.744 493 82 8 6255 6746 19141393 19140908 8.180000e-109 405.0
56 TraesCS1D01G222300 chr7D 81.218 197 30 5 1198 1392 61434890 61434699 1.180000e-32 152.0
57 TraesCS1D01G222300 chr7D 85.366 123 18 0 1247 1369 512788677 512788799 1.980000e-25 128.0
58 TraesCS1D01G222300 chr6A 81.349 504 85 8 6245 6746 29330635 29331131 1.060000e-107 401.0
59 TraesCS1D01G222300 chr6A 83.019 212 21 9 1203 1412 457093809 457094007 1.940000e-40 178.0
60 TraesCS1D01G222300 chr6A 79.024 205 29 5 2124 2314 592011224 592011428 1.980000e-25 128.0
61 TraesCS1D01G222300 chr6A 83.186 113 19 0 1257 1369 572347399 572347511 3.340000e-18 104.0
62 TraesCS1D01G222300 chr2B 83.432 338 50 6 6410 6746 610927526 610927858 6.590000e-80 309.0
63 TraesCS1D01G222300 chr2B 85.641 195 23 3 1205 1397 197993226 197993035 4.140000e-47 200.0
64 TraesCS1D01G222300 chr2B 96.774 31 1 0 2540 2570 206371369 206371399 1.200000e-02 52.8
65 TraesCS1D01G222300 chr5B 88.793 232 11 4 5180 5396 461609950 461610181 3.110000e-68 270.0
66 TraesCS1D01G222300 chr5B 84.264 197 24 5 1198 1392 673332058 673332249 1.160000e-42 185.0
67 TraesCS1D01G222300 chr5B 89.051 137 8 5 5401 5537 461703023 461703152 5.430000e-36 163.0
68 TraesCS1D01G222300 chr5B 95.652 69 2 1 2267 2334 24641579 24641511 7.180000e-20 110.0
69 TraesCS1D01G222300 chr5B 89.041 73 7 1 1589 1661 684373234 684373163 9.350000e-14 89.8
70 TraesCS1D01G222300 chr5B 92.727 55 4 0 2276 2330 442269912 442269966 5.630000e-11 80.5
71 TraesCS1D01G222300 chr6B 87.817 197 19 3 1203 1397 666089885 666090078 6.830000e-55 226.0
72 TraesCS1D01G222300 chr6B 79.828 233 29 13 2118 2337 16600046 16599819 3.270000e-33 154.0
73 TraesCS1D01G222300 chr3D 84.615 195 28 2 1248 1441 543768476 543768283 6.930000e-45 193.0
74 TraesCS1D01G222300 chr3D 83.756 197 25 5 1198 1392 350637144 350636953 5.390000e-41 180.0
75 TraesCS1D01G222300 chr3D 88.095 84 10 0 1585 1668 394064941 394064858 4.320000e-17 100.0
76 TraesCS1D01G222300 chr4A 88.811 143 16 0 1248 1390 154318289 154318147 6.980000e-40 176.0
77 TraesCS1D01G222300 chr4A 78.694 291 35 16 1090 1356 668317590 668317303 1.170000e-37 169.0
78 TraesCS1D01G222300 chr3B 87.919 149 18 0 1267 1415 719423233 719423085 6.980000e-40 176.0
79 TraesCS1D01G222300 chr2D 88.112 143 17 0 1248 1390 74518951 74518809 3.250000e-38 171.0
80 TraesCS1D01G222300 chr2D 84.337 166 26 0 1250 1415 9185163 9184998 5.430000e-36 163.0
81 TraesCS1D01G222300 chr2D 86.395 147 19 1 1512 1657 583230880 583231026 7.030000e-35 159.0
82 TraesCS1D01G222300 chr2D 96.774 31 1 0 2540 2570 146303652 146303682 1.200000e-02 52.8
83 TraesCS1D01G222300 chr2A 94.118 68 4 0 2267 2334 753566807 753566740 3.340000e-18 104.0
84 TraesCS1D01G222300 chrUn 91.781 73 3 2 1589 1660 19739302 19739232 1.550000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G222300 chr1D 309975579 309982348 6769 True 12502.000 12502 100.000000 1 6770 1 chr1D.!!$R2 6769
1 TraesCS1D01G222300 chr1D 208753327 208753858 531 True 739.000 739 92.308000 6246 6760 1 chr1D.!!$R1 514
2 TraesCS1D01G222300 chr1A 389823081 389829050 5969 True 1256.600 2483 87.389600 1 6139 5 chr1A.!!$R2 6138
3 TraesCS1D01G222300 chr3A 128556573 128562969 6396 False 688.625 2047 88.615375 888 6130 8 chr3A.!!$F3 5242
4 TraesCS1D01G222300 chr3A 128548361 128551235 2874 True 651.250 876 87.914500 287 3366 4 chr3A.!!$R2 3079
5 TraesCS1D01G222300 chr1B 419973402 419983456 10054 False 742.425 1650 90.875000 1 6144 8 chr1B.!!$F4 6143
6 TraesCS1D01G222300 chr7B 452175570 452176233 663 False 957.000 957 92.943000 1017 1670 1 chr7B.!!$F2 653
7 TraesCS1D01G222300 chr4B 364360323 364360832 509 True 558.000 558 86.940000 1016 1512 1 chr4B.!!$R2 496

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
219 227 0.179100 TACTCTACGAGTACGCGGCT 60.179 55.0 22.86 8.33 41.51 5.52 F
1098 1550 0.106519 AATCCTCGAGGGCCCATTTG 60.107 55.0 30.80 8.47 35.41 2.32 F
1659 2588 0.107165 CGAACCTCCCCAATCCCTTC 60.107 60.0 0.00 0.00 0.00 3.46 F
2461 3906 0.178967 ACCACACATGCATTGGTGGA 60.179 50.0 35.91 0.00 43.71 4.02 F
2882 5762 0.107848 AAGTAAGCAACGATCCCCCG 60.108 55.0 0.00 0.00 0.00 5.73 F
3373 6298 0.319383 TTGCGGGCGTCGTTTAACTA 60.319 50.0 0.00 0.00 41.72 2.24 F
4684 10922 0.877743 GGCTTGAAGTTGTCTCTGGC 59.122 55.0 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1660 2589 0.318699 TCAGGTCGAGCGTTTGACAG 60.319 55.0 19.76 12.18 39.16 3.51 R
2337 3316 0.178068 ACCACGCTCTGAAACACACT 59.822 50.0 0.00 0.00 0.00 3.55 R
2545 3990 0.179108 GGTAACTGGTAGCTGCTCGG 60.179 60.0 4.91 0.00 0.00 4.63 R
3390 7656 0.250945 TATGTGGGTTTTGCGCCAGA 60.251 50.0 4.18 0.00 0.00 3.86 R
4809 11047 0.108585 TGCCACTGGAAGACTGGAAC 59.891 55.0 0.00 0.00 32.07 3.62 R
4810 11048 0.108585 GTGCCACTGGAAGACTGGAA 59.891 55.0 0.00 0.00 32.07 3.53 R
6157 12557 0.030705 TCCAGGGGGAGGAGAAGATG 60.031 60.0 0.00 0.00 38.64 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 93 0.536233 TAGCAGCGCAGTGGGAAAAA 60.536 50.000 11.47 0.00 0.00 1.94
98 99 0.521735 CGCAGTGGGAAAAACTAGCC 59.478 55.000 0.00 0.00 0.00 3.93
171 179 2.158623 TGTAATGATCCACCAGCCATCC 60.159 50.000 0.00 0.00 0.00 3.51
208 216 5.340803 ACTGCATGTACAATGTACTCTACG 58.659 41.667 22.22 11.55 0.00 3.51
209 217 5.124936 ACTGCATGTACAATGTACTCTACGA 59.875 40.000 22.22 3.55 0.00 3.43
210 218 5.578776 TGCATGTACAATGTACTCTACGAG 58.421 41.667 22.22 7.33 35.52 4.18
219 227 0.179100 TACTCTACGAGTACGCGGCT 60.179 55.000 22.86 8.33 41.51 5.52
271 285 2.359850 GGCGAGCCATGTGGTTGA 60.360 61.111 9.58 0.00 37.57 3.18
273 287 1.210155 GCGAGCCATGTGGTTGAAC 59.790 57.895 0.35 0.00 37.57 3.18
274 288 1.237285 GCGAGCCATGTGGTTGAACT 61.237 55.000 0.35 0.00 37.57 3.01
275 289 1.238439 CGAGCCATGTGGTTGAACTT 58.762 50.000 0.35 0.00 37.57 2.66
276 290 1.069022 CGAGCCATGTGGTTGAACTTG 60.069 52.381 0.35 0.00 37.57 3.16
277 291 1.270550 GAGCCATGTGGTTGAACTTGG 59.729 52.381 0.35 5.20 44.38 3.61
278 292 1.133513 AGCCATGTGGTTGAACTTGGA 60.134 47.619 12.07 0.00 44.34 3.53
279 293 1.270550 GCCATGTGGTTGAACTTGGAG 59.729 52.381 12.07 0.00 44.34 3.86
280 294 1.888512 CCATGTGGTTGAACTTGGAGG 59.111 52.381 3.78 0.00 44.34 4.30
281 295 1.888512 CATGTGGTTGAACTTGGAGGG 59.111 52.381 0.00 0.00 0.00 4.30
282 296 0.184933 TGTGGTTGAACTTGGAGGGG 59.815 55.000 0.00 0.00 0.00 4.79
283 297 1.152830 TGGTTGAACTTGGAGGGGC 59.847 57.895 0.00 0.00 0.00 5.80
284 298 1.606601 GGTTGAACTTGGAGGGGCC 60.607 63.158 0.00 0.00 37.10 5.80
330 344 3.112709 GCAGCGTCGTCAGGGTTC 61.113 66.667 0.00 0.00 0.00 3.62
354 369 3.467803 GCTTATAATTCAGAGGGCACGT 58.532 45.455 0.00 0.00 0.00 4.49
355 370 4.502604 GGCTTATAATTCAGAGGGCACGTA 60.503 45.833 0.00 0.00 0.00 3.57
356 371 4.448060 GCTTATAATTCAGAGGGCACGTAC 59.552 45.833 0.00 0.00 0.00 3.67
357 372 2.572191 TAATTCAGAGGGCACGTACG 57.428 50.000 15.01 15.01 0.00 3.67
358 373 0.606604 AATTCAGAGGGCACGTACGT 59.393 50.000 16.72 16.72 0.00 3.57
359 374 1.466856 ATTCAGAGGGCACGTACGTA 58.533 50.000 22.34 1.90 0.00 3.57
360 375 1.246649 TTCAGAGGGCACGTACGTAA 58.753 50.000 22.34 6.22 0.00 3.18
412 427 8.642908 TCATGCATTGATTTTGATTGATTCTC 57.357 30.769 0.00 0.00 0.00 2.87
452 467 1.529244 GGCAGGGCTTGTGTTGTCT 60.529 57.895 0.00 0.00 0.00 3.41
474 489 5.594317 TCTCGTTCATTCACTGATGATCCTA 59.406 40.000 0.00 0.00 36.05 2.94
510 525 1.202817 TGGCGAGCAGTAAACGTATCA 59.797 47.619 0.00 0.00 0.00 2.15
513 528 2.151360 GCGAGCAGTAAACGTATCATCG 59.849 50.000 0.00 0.00 0.00 3.84
576 596 4.035208 GGTGTTTGACTGTTTGTTCGATCT 59.965 41.667 0.00 0.00 0.00 2.75
617 642 5.648247 AGGAATCCTATGGAATGATTTGGG 58.352 41.667 0.00 0.00 34.34 4.12
640 670 5.696724 GGATACGACGATCATCAGGAAAAAT 59.303 40.000 0.00 0.00 0.00 1.82
686 719 4.929707 GGGCGGGGCGAATTCGAT 62.930 66.667 31.01 0.00 43.02 3.59
722 764 5.582953 TGAATCCACATCCCAAGAAAGAAT 58.417 37.500 0.00 0.00 0.00 2.40
749 791 2.333926 CGAAATGTTGCGAGTGGTAGA 58.666 47.619 0.00 0.00 0.00 2.59
813 858 0.983378 GGGCTAGGGCGGGATCATAT 60.983 60.000 0.00 0.00 39.81 1.78
923 985 1.068585 GTTTGTCTGTCGGGGTCGT 59.931 57.895 0.00 0.00 37.69 4.34
969 1031 1.488261 GCTATACAACGCTGACGCCC 61.488 60.000 0.00 0.00 45.53 6.13
1063 1504 1.635487 TGAGGGGGTTTCAGAGGATTG 59.365 52.381 0.00 0.00 0.00 2.67
1065 1506 2.511637 GAGGGGGTTTCAGAGGATTGAT 59.488 50.000 0.00 0.00 0.00 2.57
1066 1507 2.929043 AGGGGGTTTCAGAGGATTGATT 59.071 45.455 0.00 0.00 0.00 2.57
1098 1550 0.106519 AATCCTCGAGGGCCCATTTG 60.107 55.000 30.80 8.47 35.41 2.32
1201 2126 2.227036 AGGCAGGGAACACAGGGAG 61.227 63.158 0.00 0.00 0.00 4.30
1408 2334 0.314935 CATGCCTCCGTTTTGCAACT 59.685 50.000 0.00 0.00 38.69 3.16
1513 2442 0.464373 CCATGGCCAGTTCGCTGTAT 60.464 55.000 13.05 0.00 43.51 2.29
1555 2484 5.841237 TCAAACATGTTTTTATGGAAGGGGA 59.159 36.000 21.10 8.10 32.32 4.81
1577 2506 2.875296 TGAAAACTTGGGGATGTGAGG 58.125 47.619 0.00 0.00 0.00 3.86
1589 2518 1.419387 GATGTGAGGGGAATGGAGAGG 59.581 57.143 0.00 0.00 0.00 3.69
1656 2585 2.595655 CCGAACCTCCCCAATCCC 59.404 66.667 0.00 0.00 0.00 3.85
1659 2588 0.107165 CGAACCTCCCCAATCCCTTC 60.107 60.000 0.00 0.00 0.00 3.46
1660 2589 0.259065 GAACCTCCCCAATCCCTTCC 59.741 60.000 0.00 0.00 0.00 3.46
1749 2691 3.147595 TCCCGTCTGGATCGCCTG 61.148 66.667 0.00 0.00 38.61 4.85
1750 2692 4.899239 CCCGTCTGGATCGCCTGC 62.899 72.222 0.00 0.00 37.49 4.85
1751 2693 4.899239 CCGTCTGGATCGCCTGCC 62.899 72.222 0.00 0.00 37.49 4.85
1752 2694 4.899239 CGTCTGGATCGCCTGCCC 62.899 72.222 0.00 0.00 33.46 5.36
1753 2695 4.554036 GTCTGGATCGCCTGCCCC 62.554 72.222 0.00 0.00 33.46 5.80
1754 2696 4.804420 TCTGGATCGCCTGCCCCT 62.804 66.667 0.00 0.00 33.46 4.79
1858 2800 3.023832 CTCTCTCCCCTCTGTTTCTCTC 58.976 54.545 0.00 0.00 0.00 3.20
1900 2869 9.185192 GCTGGTAATGATTTGTATGCTAATTTC 57.815 33.333 0.00 0.00 0.00 2.17
1927 2896 5.300286 GGCTGCTAGTGAAATATTTGGATGT 59.700 40.000 5.17 0.00 0.00 3.06
1968 2937 7.325660 ACAAGTTGTATGATTGATGACATCC 57.674 36.000 6.75 0.00 0.00 3.51
1973 2943 5.370679 TGTATGATTGATGACATCCAGTGG 58.629 41.667 12.90 1.40 0.00 4.00
2002 2975 8.638685 AAATTGCATGATTGATTGCTTAGTAC 57.361 30.769 0.00 0.00 39.60 2.73
2081 3056 5.883661 AGATTTAAATGTTCGCACATGGAG 58.116 37.500 5.17 0.00 43.34 3.86
2128 3107 5.345702 CACTGTGAGCAATTTGGGATATTG 58.654 41.667 0.32 0.00 36.34 1.90
2187 3166 2.489971 TCAGAACAACCAAGCGTTAGG 58.510 47.619 0.00 0.00 31.77 2.69
2205 3184 6.979238 GCGTTAGGAATTCAGTACATAGTTCT 59.021 38.462 7.93 0.00 0.00 3.01
2232 3211 5.363580 CCTAGGGGCATTACAAACATTTCAT 59.636 40.000 0.00 0.00 0.00 2.57
2233 3212 5.760484 AGGGGCATTACAAACATTTCATT 57.240 34.783 0.00 0.00 0.00 2.57
2260 3239 8.845227 ACACAACACATACAACAATCTCATAAA 58.155 29.630 0.00 0.00 0.00 1.40
2270 3249 6.265196 ACAACAATCTCATAAAAGAACTGGCA 59.735 34.615 0.00 0.00 0.00 4.92
2321 3300 6.683312 TCATATTCTGGAGAATCATGAGCT 57.317 37.500 5.14 0.51 43.17 4.09
2337 3316 2.498167 GAGCTGAAAAGAACTGGCTCA 58.502 47.619 0.00 0.00 43.60 4.26
2353 3332 1.858091 CTCAGTGTGTTTCAGAGCGT 58.142 50.000 0.00 0.00 0.00 5.07
2370 3349 1.675641 GTGGTCAAAGCTCCGCCAT 60.676 57.895 0.00 0.00 0.00 4.40
2415 3398 2.685017 TGACCGCTCTGCAGGGAT 60.685 61.111 20.53 0.38 34.38 3.85
2428 3411 2.825836 GGGATGAAGCCGCACTGG 60.826 66.667 0.00 0.00 42.50 4.00
2457 3902 1.809547 TCGTAACCACACATGCATTGG 59.190 47.619 13.34 13.34 36.39 3.16
2461 3906 0.178967 ACCACACATGCATTGGTGGA 60.179 50.000 35.91 0.00 43.71 4.02
2476 3921 4.650972 TGGTGGAAATAGTTAACCAGCT 57.349 40.909 12.29 0.00 46.68 4.24
2500 3945 8.988934 GCTGATTAATGGTCGACTGATTAATTA 58.011 33.333 27.91 24.96 34.09 1.40
2545 3990 0.690077 ATCCCTACTCCCCAACCGAC 60.690 60.000 0.00 0.00 0.00 4.79
2583 5420 9.878599 CAGTTACCGATATCCAAAATATTTGAC 57.121 33.333 0.39 0.00 0.00 3.18
2607 5444 3.570125 AGGACTAGGTTGCTTTCTTTTGC 59.430 43.478 0.00 0.00 0.00 3.68
2609 5446 2.293399 ACTAGGTTGCTTTCTTTTGCCG 59.707 45.455 0.00 0.00 0.00 5.69
2613 5450 3.572255 AGGTTGCTTTCTTTTGCCGATTA 59.428 39.130 0.00 0.00 0.00 1.75
2614 5451 3.920412 GGTTGCTTTCTTTTGCCGATTAG 59.080 43.478 0.00 0.00 0.00 1.73
2788 5633 0.681564 ACGCCCCAAAACACTTGACA 60.682 50.000 0.00 0.00 0.00 3.58
2791 5636 1.202405 GCCCCAAAACACTTGACACTG 60.202 52.381 0.00 0.00 0.00 3.66
2826 5671 4.410400 CTGTCCGCCTCCAACCCC 62.410 72.222 0.00 0.00 0.00 4.95
2841 5714 3.227276 CCCCGATCCTCTCCGTGG 61.227 72.222 0.00 0.00 0.00 4.94
2844 5717 1.454111 CCGATCCTCTCCGTGGTCT 60.454 63.158 0.00 0.00 0.00 3.85
2857 5730 1.474879 CGTGGTCTTCCTCCTCTTCTC 59.525 57.143 0.00 0.00 34.23 2.87
2860 5733 1.107945 GTCTTCCTCCTCTTCTCCCG 58.892 60.000 0.00 0.00 0.00 5.14
2873 5753 0.321298 TCTCCCGCCAAGTAAGCAAC 60.321 55.000 0.00 0.00 0.00 4.17
2882 5762 0.107848 AAGTAAGCAACGATCCCCCG 60.108 55.000 0.00 0.00 0.00 5.73
2883 5763 2.178235 GTAAGCAACGATCCCCCGC 61.178 63.158 0.00 0.00 0.00 6.13
2923 5804 8.598041 AGTTCTTTTGTCTCCACTACTGATTAT 58.402 33.333 0.00 0.00 0.00 1.28
2957 5870 9.234384 ACTAGTGATGAGAATATTACGAAAACG 57.766 33.333 0.00 0.00 0.00 3.60
2969 5882 9.585099 AATATTACGAAAACGGTACTGTAATGA 57.415 29.630 8.00 0.00 35.07 2.57
2976 5889 7.425309 CGAAAACGGTACTGTAATGATCATTTG 59.575 37.037 25.26 17.23 32.50 2.32
2983 5896 8.395633 GGTACTGTAATGATCATTTGGTGTAAC 58.604 37.037 25.26 19.33 32.50 2.50
2987 5900 8.171164 TGTAATGATCATTTGGTGTAACAACA 57.829 30.769 25.26 15.80 33.10 3.33
2988 5901 8.079203 TGTAATGATCATTTGGTGTAACAACAC 58.921 33.333 25.26 12.93 33.10 3.32
3012 5926 2.030805 CCTGTACTGCTGAAAACCTTGC 60.031 50.000 0.00 0.00 0.00 4.01
3013 5927 2.880890 CTGTACTGCTGAAAACCTTGCT 59.119 45.455 0.00 0.00 0.00 3.91
3014 5928 4.065088 CTGTACTGCTGAAAACCTTGCTA 58.935 43.478 0.00 0.00 0.00 3.49
3015 5929 4.065088 TGTACTGCTGAAAACCTTGCTAG 58.935 43.478 0.00 0.00 0.00 3.42
3016 5930 3.214696 ACTGCTGAAAACCTTGCTAGT 57.785 42.857 0.00 0.00 0.00 2.57
3017 5931 4.351874 ACTGCTGAAAACCTTGCTAGTA 57.648 40.909 0.00 0.00 0.00 1.82
3018 5932 4.319177 ACTGCTGAAAACCTTGCTAGTAG 58.681 43.478 0.00 0.00 0.00 2.57
3019 5933 4.202367 ACTGCTGAAAACCTTGCTAGTAGT 60.202 41.667 0.00 0.00 0.00 2.73
3020 5934 4.065088 TGCTGAAAACCTTGCTAGTAGTG 58.935 43.478 0.00 0.00 0.00 2.74
3034 5948 4.335874 GCTAGTAGTGCTAGTACTGCAGAA 59.664 45.833 25.92 12.98 46.81 3.02
3241 6159 7.856894 GTGTACAAATTTTGTTTCGTAGGCTAA 59.143 33.333 19.15 0.00 42.22 3.09
3299 6217 2.502142 TGAAGGCATGAAGCTGATGT 57.498 45.000 0.00 0.00 44.79 3.06
3308 6226 3.057969 TGAAGCTGATGTTGTTCCGAT 57.942 42.857 0.00 0.00 0.00 4.18
3373 6298 0.319383 TTGCGGGCGTCGTTTAACTA 60.319 50.000 0.00 0.00 41.72 2.24
3390 7656 8.662141 CGTTTAACTACCAAGCATATTAAGTGT 58.338 33.333 0.00 0.00 0.00 3.55
3447 7713 2.028043 GCTATTGCCGCATTGCCC 59.972 61.111 2.41 0.00 0.00 5.36
3616 7882 6.961554 CGTCATCTTTTAGGAACTACAAATGC 59.038 38.462 0.00 0.00 42.67 3.56
3617 7883 7.148407 CGTCATCTTTTAGGAACTACAAATGCT 60.148 37.037 0.00 0.00 42.67 3.79
3679 7945 8.798859 TTAGCTGAAGAATTTTGAGCTCTAAT 57.201 30.769 16.19 11.56 40.46 1.73
4281 8576 2.441375 TGAGACACATCCCACCAAAGAA 59.559 45.455 0.00 0.00 0.00 2.52
4302 8597 6.546395 AGAATCGTTCAAAATTTCGATCCTG 58.454 36.000 11.51 0.00 41.17 3.86
4305 8600 6.494893 TCGTTCAAAATTTCGATCCTGAAT 57.505 33.333 4.52 0.00 0.00 2.57
4312 8607 8.802267 TCAAAATTTCGATCCTGAATTTTACCT 58.198 29.630 14.08 0.00 32.98 3.08
4320 8615 5.359194 TCCTGAATTTTACCTAGGCTCAG 57.641 43.478 9.30 10.90 0.00 3.35
4494 8791 1.064060 GATTACAGCGGCATCCACAAC 59.936 52.381 1.45 0.00 0.00 3.32
4515 8812 9.559958 CACAACTCATTTCATCAATTAGTTACC 57.440 33.333 0.00 0.00 37.25 2.85
4535 8832 2.564062 CCCTGAATGCACTGGACAATTT 59.436 45.455 0.00 0.00 0.00 1.82
4634 10871 2.568090 CCGGGCATGCAACTGTTC 59.432 61.111 21.36 0.00 0.00 3.18
4658 10896 1.542492 AGTTTGATGCTGCCTCAAGG 58.458 50.000 17.56 0.00 34.33 3.61
4677 10915 1.322442 GGCTCAAGGCTTGAAGTTGT 58.678 50.000 28.27 0.00 39.58 3.32
4684 10922 0.877743 GGCTTGAAGTTGTCTCTGGC 59.122 55.000 0.00 0.00 0.00 4.85
4693 10931 2.173569 AGTTGTCTCTGGCTTCTTTGGT 59.826 45.455 0.00 0.00 0.00 3.67
4701 10939 2.031120 TGGCTTCTTTGGTTGGACTTG 58.969 47.619 0.00 0.00 0.00 3.16
4722 10960 5.574891 TGTGCAGTCAGTTTACAAACATT 57.425 34.783 7.53 0.00 41.30 2.71
4751 10989 5.102313 GTCTTGCACATTTATAAACCCTGC 58.898 41.667 13.17 13.17 0.00 4.85
4769 11007 6.697395 ACCCTGCAATTAGTTAAACATTTCC 58.303 36.000 0.00 0.00 0.00 3.13
4770 11008 6.268847 ACCCTGCAATTAGTTAAACATTTCCA 59.731 34.615 0.00 0.00 0.00 3.53
4771 11009 6.813152 CCCTGCAATTAGTTAAACATTTCCAG 59.187 38.462 0.00 0.00 0.00 3.86
4773 11011 7.542130 CCTGCAATTAGTTAAACATTTCCAGTC 59.458 37.037 0.00 0.00 0.00 3.51
4774 11012 7.946207 TGCAATTAGTTAAACATTTCCAGTCA 58.054 30.769 0.00 0.00 0.00 3.41
4775 11013 8.584157 TGCAATTAGTTAAACATTTCCAGTCAT 58.416 29.630 0.00 0.00 0.00 3.06
4779 11017 8.836268 TTAGTTAAACATTTCCAGTCATACGT 57.164 30.769 0.00 0.00 0.00 3.57
4780 11018 9.926158 TTAGTTAAACATTTCCAGTCATACGTA 57.074 29.630 0.00 0.00 0.00 3.57
4781 11019 8.248117 AGTTAAACATTTCCAGTCATACGTAC 57.752 34.615 0.00 0.00 0.00 3.67
4783 11021 9.357652 GTTAAACATTTCCAGTCATACGTACTA 57.642 33.333 0.00 0.00 0.00 1.82
4784 11022 9.577110 TTAAACATTTCCAGTCATACGTACTAG 57.423 33.333 0.00 0.00 0.00 2.57
4786 11024 6.793349 ACATTTCCAGTCATACGTACTAGTC 58.207 40.000 0.00 0.00 0.00 2.59
4787 11025 6.376299 ACATTTCCAGTCATACGTACTAGTCA 59.624 38.462 0.00 0.00 0.00 3.41
4788 11026 7.068348 ACATTTCCAGTCATACGTACTAGTCAT 59.932 37.037 0.00 0.00 0.00 3.06
4789 11027 7.400599 TTTCCAGTCATACGTACTAGTCATT 57.599 36.000 0.00 0.00 0.00 2.57
4791 11029 5.298527 TCCAGTCATACGTACTAGTCATTGG 59.701 44.000 0.00 0.00 0.00 3.16
4792 11030 5.507482 CCAGTCATACGTACTAGTCATTGGG 60.507 48.000 0.00 0.00 0.00 4.12
4793 11031 5.067413 CAGTCATACGTACTAGTCATTGGGT 59.933 44.000 0.00 0.00 0.00 4.51
4794 11032 6.261603 CAGTCATACGTACTAGTCATTGGGTA 59.738 42.308 0.00 0.00 0.00 3.69
4795 11033 6.261826 AGTCATACGTACTAGTCATTGGGTAC 59.738 42.308 0.00 0.00 33.42 3.34
4796 11034 6.038603 GTCATACGTACTAGTCATTGGGTACA 59.961 42.308 0.00 0.00 35.61 2.90
4797 11035 4.708726 ACGTACTAGTCATTGGGTACAC 57.291 45.455 0.00 0.00 35.61 2.90
4798 11036 4.081406 ACGTACTAGTCATTGGGTACACA 58.919 43.478 0.00 0.00 35.61 3.72
4799 11037 4.708421 ACGTACTAGTCATTGGGTACACAT 59.292 41.667 0.00 0.00 35.61 3.21
4800 11038 5.887598 ACGTACTAGTCATTGGGTACACATA 59.112 40.000 0.00 0.00 35.61 2.29
4801 11039 6.183360 ACGTACTAGTCATTGGGTACACATAC 60.183 42.308 0.00 0.00 35.61 2.39
4802 11040 6.183360 CGTACTAGTCATTGGGTACACATACA 60.183 42.308 0.00 0.00 35.61 2.29
4803 11041 5.974108 ACTAGTCATTGGGTACACATACAC 58.026 41.667 0.00 0.00 35.02 2.90
4804 11042 3.857052 AGTCATTGGGTACACATACACG 58.143 45.455 0.00 0.00 37.55 4.49
4805 11043 3.512329 AGTCATTGGGTACACATACACGA 59.488 43.478 0.00 0.00 37.55 4.35
4808 11046 5.006358 GTCATTGGGTACACATACACGATTC 59.994 44.000 0.00 0.00 36.78 2.52
4809 11047 3.153676 TGGGTACACATACACGATTCG 57.846 47.619 4.14 4.14 37.55 3.34
4810 11048 2.492881 TGGGTACACATACACGATTCGT 59.507 45.455 5.75 5.75 37.55 3.85
4813 11051 3.549070 GGTACACATACACGATTCGTTCC 59.451 47.826 9.40 0.00 38.32 3.62
4814 11052 3.306917 ACACATACACGATTCGTTCCA 57.693 42.857 9.40 0.00 38.32 3.53
4815 11053 3.250744 ACACATACACGATTCGTTCCAG 58.749 45.455 9.40 0.62 38.32 3.86
4816 11054 3.250744 CACATACACGATTCGTTCCAGT 58.749 45.455 9.40 7.04 38.32 4.00
4817 11055 3.303495 CACATACACGATTCGTTCCAGTC 59.697 47.826 9.40 0.00 38.32 3.51
4820 11058 2.673833 ACACGATTCGTTCCAGTCTTC 58.326 47.619 9.40 0.00 38.32 2.87
4821 11059 1.993370 CACGATTCGTTCCAGTCTTCC 59.007 52.381 9.40 0.00 38.32 3.46
4824 11062 2.352814 CGATTCGTTCCAGTCTTCCAGT 60.353 50.000 0.00 0.00 0.00 4.00
4825 11063 2.526304 TTCGTTCCAGTCTTCCAGTG 57.474 50.000 0.00 0.00 0.00 3.66
4827 11065 0.951040 CGTTCCAGTCTTCCAGTGGC 60.951 60.000 3.51 0.00 44.70 5.01
4828 11066 0.108585 GTTCCAGTCTTCCAGTGGCA 59.891 55.000 3.51 0.00 44.70 4.92
4829 11067 0.108585 TTCCAGTCTTCCAGTGGCAC 59.891 55.000 10.29 10.29 44.70 5.01
4830 11068 1.302832 CCAGTCTTCCAGTGGCACC 60.303 63.158 15.27 0.00 38.87 5.01
4832 11070 1.770110 AGTCTTCCAGTGGCACCCA 60.770 57.895 15.27 0.00 0.00 4.51
4833 11071 1.150536 GTCTTCCAGTGGCACCCAA 59.849 57.895 15.27 3.66 34.18 4.12
4834 11072 0.251341 GTCTTCCAGTGGCACCCAAT 60.251 55.000 15.27 0.00 34.18 3.16
4835 11073 0.482446 TCTTCCAGTGGCACCCAATT 59.518 50.000 15.27 0.00 34.18 2.32
4836 11074 0.890683 CTTCCAGTGGCACCCAATTC 59.109 55.000 15.27 0.00 34.18 2.17
4838 11076 0.187117 TCCAGTGGCACCCAATTCAA 59.813 50.000 15.27 0.00 34.18 2.69
4839 11077 1.203162 TCCAGTGGCACCCAATTCAAT 60.203 47.619 15.27 0.00 34.18 2.57
4840 11078 1.205417 CCAGTGGCACCCAATTCAATC 59.795 52.381 15.27 0.00 34.18 2.67
4841 11079 1.205417 CAGTGGCACCCAATTCAATCC 59.795 52.381 15.27 0.00 34.18 3.01
4842 11080 1.077663 AGTGGCACCCAATTCAATCCT 59.922 47.619 15.27 0.00 34.18 3.24
4843 11081 1.205417 GTGGCACCCAATTCAATCCTG 59.795 52.381 6.29 0.00 34.18 3.86
4844 11082 1.076841 TGGCACCCAATTCAATCCTGA 59.923 47.619 0.00 0.00 0.00 3.86
4845 11083 1.478105 GGCACCCAATTCAATCCTGAC 59.522 52.381 0.00 0.00 0.00 3.51
4846 11084 2.170166 GCACCCAATTCAATCCTGACA 58.830 47.619 0.00 0.00 0.00 3.58
4847 11085 2.762327 GCACCCAATTCAATCCTGACAT 59.238 45.455 0.00 0.00 0.00 3.06
4851 11089 6.509656 CACCCAATTCAATCCTGACATAATG 58.490 40.000 0.00 0.00 0.00 1.90
4852 11090 6.321945 CACCCAATTCAATCCTGACATAATGA 59.678 38.462 0.00 0.00 0.00 2.57
4853 11091 7.014905 CACCCAATTCAATCCTGACATAATGAT 59.985 37.037 0.00 0.00 0.00 2.45
4855 11093 7.375834 CCAATTCAATCCTGACATAATGATGG 58.624 38.462 0.00 0.00 37.39 3.51
4856 11094 6.585695 ATTCAATCCTGACATAATGATGGC 57.414 37.500 0.00 0.00 42.08 4.40
4865 11103 4.512571 TGACATAATGATGGCATCTCAACG 59.487 41.667 26.49 15.07 46.72 4.10
4866 11104 3.817084 ACATAATGATGGCATCTCAACGG 59.183 43.478 26.49 14.46 37.39 4.44
4868 11106 2.251409 ATGATGGCATCTCAACGGAG 57.749 50.000 26.49 0.00 42.80 4.63
4869 11107 2.092753 AATGATGGCATCTCAACGGAGT 60.093 45.455 26.49 2.54 42.05 3.85
4870 11108 1.134699 TGATGGCATCTCAACGGAGTC 60.135 52.381 26.49 0.00 45.00 3.36
4871 11109 0.179000 ATGGCATCTCAACGGAGTCC 59.821 55.000 0.00 0.00 45.00 3.85
4872 11110 1.191489 TGGCATCTCAACGGAGTCCA 61.191 55.000 10.49 0.00 45.00 4.02
4875 11113 2.359900 GCATCTCAACGGAGTCCATTT 58.640 47.619 10.49 0.00 45.00 2.32
4876 11114 2.352960 GCATCTCAACGGAGTCCATTTC 59.647 50.000 10.49 0.00 45.00 2.17
4877 11115 3.599343 CATCTCAACGGAGTCCATTTCA 58.401 45.455 10.49 0.00 45.00 2.69
4878 11116 3.319137 TCTCAACGGAGTCCATTTCAG 57.681 47.619 10.49 0.00 45.00 3.02
4879 11117 1.734465 CTCAACGGAGTCCATTTCAGC 59.266 52.381 10.49 0.00 45.00 4.26
4880 11118 1.071542 TCAACGGAGTCCATTTCAGCA 59.928 47.619 10.49 0.00 45.00 4.41
4881 11119 1.466167 CAACGGAGTCCATTTCAGCAG 59.534 52.381 10.49 0.00 45.00 4.24
4883 11121 1.072331 ACGGAGTCCATTTCAGCAGTT 59.928 47.619 10.49 0.00 29.74 3.16
4889 11214 4.319177 AGTCCATTTCAGCAGTTAGTCAC 58.681 43.478 0.00 0.00 0.00 3.67
4893 11218 4.083643 CCATTTCAGCAGTTAGTCACACTG 60.084 45.833 0.00 0.00 43.99 3.66
4957 11290 5.344743 TCAGCTCCACTCACTAAAATAGG 57.655 43.478 0.00 0.00 0.00 2.57
4962 11295 6.322712 AGCTCCACTCACTAAAATAGGTAGAG 59.677 42.308 0.00 0.00 32.89 2.43
4999 11332 4.656041 GCTTTGACCTCTTGATTCATTCG 58.344 43.478 0.00 0.00 0.00 3.34
5001 11334 5.672321 GCTTTGACCTCTTGATTCATTCGTC 60.672 44.000 0.00 0.00 0.00 4.20
5190 11527 2.991190 GTTCATCTCGAAGCGGTTTGTA 59.009 45.455 14.02 4.89 33.09 2.41
5403 11745 2.739996 CGAGGGCAAGATCAGGGCT 61.740 63.158 9.49 0.00 0.00 5.19
5494 11836 1.357907 TTTTTGCTGCTGTTGTGTGC 58.642 45.000 0.00 0.00 0.00 4.57
5501 11843 1.066257 GCTGTTGTGTGCCTGTTGG 59.934 57.895 0.00 0.00 0.00 3.77
5538 11880 0.797542 CTGCTGCTGAAGAAGAGTGC 59.202 55.000 0.00 0.00 32.35 4.40
5639 11995 1.275573 AGACTTTTCACGGGTAGCTCC 59.724 52.381 0.00 0.00 0.00 4.70
5645 12001 1.379977 CACGGGTAGCTCCTCTCCA 60.380 63.158 0.00 0.00 36.25 3.86
5649 12005 0.755686 GGGTAGCTCCTCTCCATGTG 59.244 60.000 0.00 0.00 36.25 3.21
5650 12006 1.689575 GGGTAGCTCCTCTCCATGTGA 60.690 57.143 0.00 0.00 36.25 3.58
5651 12007 2.111384 GGTAGCTCCTCTCCATGTGAA 58.889 52.381 0.00 0.00 0.00 3.18
5652 12008 2.501723 GGTAGCTCCTCTCCATGTGAAA 59.498 50.000 0.00 0.00 0.00 2.69
5663 12019 6.152323 CCTCTCCATGTGAAAGAAAATGTCAT 59.848 38.462 0.00 0.00 0.00 3.06
5694 12053 5.098893 TGACATTTTGGTGTCTTGTTTTCG 58.901 37.500 8.31 0.00 46.70 3.46
5755 12114 7.828717 TGATATGGTTTTCTACAGCTGAAATGA 59.171 33.333 23.35 9.50 34.04 2.57
5785 12144 2.123897 GGTGTGGGTTGGTGCAGT 60.124 61.111 0.00 0.00 0.00 4.40
5834 12224 1.741770 CTTTTCCCACGCCTCCGAG 60.742 63.158 0.00 0.00 38.29 4.63
5845 12235 4.507916 CTCCGAGGCTCCGAGGGA 62.508 72.222 20.83 14.80 0.00 4.20
5893 12287 3.006323 CCGGTGCTCTTTATCTATCTGCT 59.994 47.826 0.00 0.00 0.00 4.24
5894 12288 3.986572 CGGTGCTCTTTATCTATCTGCTG 59.013 47.826 0.00 0.00 0.00 4.41
5895 12289 3.745458 GGTGCTCTTTATCTATCTGCTGC 59.255 47.826 0.00 0.00 0.00 5.25
5904 12298 1.134280 TCTATCTGCTGCTCCTTTGGC 60.134 52.381 0.00 0.00 0.00 4.52
5908 12302 0.462581 CTGCTGCTCCTTTGGCGATA 60.463 55.000 0.00 0.00 0.00 2.92
5931 12325 1.782028 AAAGTGCGGCCGAGTGAAAC 61.782 55.000 33.48 15.75 0.00 2.78
5940 12334 1.373497 CGAGTGAAACGAGGCAGCT 60.373 57.895 0.00 0.00 45.86 4.24
6073 12473 2.674220 GCCTGCAGTAGCTCCCCTT 61.674 63.158 13.81 0.00 42.74 3.95
6082 12482 1.685517 GTAGCTCCCCTTACCGGTTAG 59.314 57.143 15.04 14.27 0.00 2.34
6145 12545 3.118454 CGAGGAAATGCCACGCGT 61.118 61.111 5.58 5.58 43.56 6.01
6146 12546 2.480555 GAGGAAATGCCACGCGTG 59.519 61.111 31.77 31.77 40.02 5.34
6147 12547 2.031919 AGGAAATGCCACGCGTGA 59.968 55.556 39.10 21.97 40.02 4.35
6148 12548 1.970917 GAGGAAATGCCACGCGTGAG 61.971 60.000 39.10 28.13 40.02 3.51
6149 12549 2.480555 GAAATGCCACGCGTGAGG 59.519 61.111 39.10 25.22 0.00 3.86
6150 12550 2.031919 AAATGCCACGCGTGAGGA 59.968 55.556 39.10 28.60 0.00 3.71
6151 12551 2.240612 GAAATGCCACGCGTGAGGAC 62.241 60.000 39.10 24.19 0.00 3.85
6152 12552 3.529341 AATGCCACGCGTGAGGACA 62.529 57.895 39.10 28.44 0.00 4.02
6153 12553 3.939837 ATGCCACGCGTGAGGACAG 62.940 63.158 39.10 22.24 0.00 3.51
6155 12555 4.662961 CCACGCGTGAGGACAGCA 62.663 66.667 39.10 0.00 0.00 4.41
6156 12556 3.108289 CACGCGTGAGGACAGCAG 61.108 66.667 34.93 1.79 0.00 4.24
6159 12559 2.435586 GCGTGAGGACAGCAGCAT 60.436 61.111 0.00 0.00 0.00 3.79
6160 12560 2.459442 GCGTGAGGACAGCAGCATC 61.459 63.158 0.00 0.00 0.00 3.91
6161 12561 1.217511 CGTGAGGACAGCAGCATCT 59.782 57.895 0.00 0.00 0.00 2.90
6162 12562 0.390866 CGTGAGGACAGCAGCATCTT 60.391 55.000 0.00 0.00 0.00 2.40
6163 12563 1.367659 GTGAGGACAGCAGCATCTTC 58.632 55.000 0.00 0.00 0.00 2.87
6164 12564 1.066286 GTGAGGACAGCAGCATCTTCT 60.066 52.381 9.39 0.00 0.00 2.85
6165 12565 1.206610 TGAGGACAGCAGCATCTTCTC 59.793 52.381 9.39 3.96 0.00 2.87
6166 12566 0.540923 AGGACAGCAGCATCTTCTCC 59.459 55.000 0.00 0.00 0.00 3.71
6167 12567 0.540923 GGACAGCAGCATCTTCTCCT 59.459 55.000 0.00 0.00 0.00 3.69
6168 12568 1.473080 GGACAGCAGCATCTTCTCCTC 60.473 57.143 0.00 0.00 0.00 3.71
6169 12569 0.540923 ACAGCAGCATCTTCTCCTCC 59.459 55.000 0.00 0.00 0.00 4.30
6170 12570 0.179051 CAGCAGCATCTTCTCCTCCC 60.179 60.000 0.00 0.00 0.00 4.30
6171 12571 1.148048 GCAGCATCTTCTCCTCCCC 59.852 63.158 0.00 0.00 0.00 4.81
6172 12572 1.835693 CAGCATCTTCTCCTCCCCC 59.164 63.158 0.00 0.00 0.00 5.40
6173 12573 0.693767 CAGCATCTTCTCCTCCCCCT 60.694 60.000 0.00 0.00 0.00 4.79
6174 12574 0.693767 AGCATCTTCTCCTCCCCCTG 60.694 60.000 0.00 0.00 0.00 4.45
6175 12575 1.704007 GCATCTTCTCCTCCCCCTGG 61.704 65.000 0.00 0.00 0.00 4.45
6176 12576 0.030705 CATCTTCTCCTCCCCCTGGA 60.031 60.000 0.00 0.00 38.75 3.86
6177 12577 0.725133 ATCTTCTCCTCCCCCTGGAA 59.275 55.000 0.00 0.00 41.17 3.53
6178 12578 0.043334 TCTTCTCCTCCCCCTGGAAG 59.957 60.000 0.00 0.00 41.17 3.46
6179 12579 0.043334 CTTCTCCTCCCCCTGGAAGA 59.957 60.000 0.00 0.00 41.17 2.87
6180 12580 0.725133 TTCTCCTCCCCCTGGAAGAT 59.275 55.000 0.00 0.00 41.17 2.40
6181 12581 0.266152 TCTCCTCCCCCTGGAAGATC 59.734 60.000 0.00 0.00 41.17 2.75
6182 12582 0.766288 CTCCTCCCCCTGGAAGATCC 60.766 65.000 0.00 0.00 41.17 3.36
6183 12583 1.004758 CCTCCCCCTGGAAGATCCA 59.995 63.158 0.00 0.00 45.98 3.41
6192 12592 2.042686 TGGAAGATCCAATCCAAGCG 57.957 50.000 9.42 0.00 45.00 4.68
6193 12593 0.665298 GGAAGATCCAATCCAAGCGC 59.335 55.000 0.00 0.00 36.28 5.92
6194 12594 0.305922 GAAGATCCAATCCAAGCGCG 59.694 55.000 0.00 0.00 0.00 6.86
6195 12595 1.718757 AAGATCCAATCCAAGCGCGC 61.719 55.000 26.66 26.66 0.00 6.86
6196 12596 2.438254 ATCCAATCCAAGCGCGCA 60.438 55.556 35.10 13.52 0.00 6.09
6197 12597 2.384391 GATCCAATCCAAGCGCGCAG 62.384 60.000 35.10 24.53 0.00 5.18
6198 12598 4.183686 CCAATCCAAGCGCGCAGG 62.184 66.667 35.10 32.04 0.00 4.85
6199 12599 3.126879 CAATCCAAGCGCGCAGGA 61.127 61.111 36.24 36.24 35.59 3.86
6200 12600 2.359850 AATCCAAGCGCGCAGGAA 60.360 55.556 37.21 25.04 34.62 3.36
6201 12601 2.401766 AATCCAAGCGCGCAGGAAG 61.402 57.895 37.21 21.09 34.62 3.46
6202 12602 2.803155 AATCCAAGCGCGCAGGAAGA 62.803 55.000 37.21 24.88 34.62 2.87
6203 12603 3.494336 CCAAGCGCGCAGGAAGAG 61.494 66.667 35.10 13.59 0.00 2.85
6204 12604 4.157958 CAAGCGCGCAGGAAGAGC 62.158 66.667 35.10 0.00 39.93 4.09
6211 12611 2.258591 GCAGGAAGAGCGTCGTCA 59.741 61.111 0.00 0.00 0.00 4.35
6212 12612 1.153745 GCAGGAAGAGCGTCGTCAT 60.154 57.895 0.00 0.00 0.00 3.06
6213 12613 1.142778 GCAGGAAGAGCGTCGTCATC 61.143 60.000 0.00 0.00 0.00 2.92
6214 12614 0.171231 CAGGAAGAGCGTCGTCATCA 59.829 55.000 0.00 0.00 0.00 3.07
6215 12615 0.453793 AGGAAGAGCGTCGTCATCAG 59.546 55.000 0.00 0.00 0.00 2.90
6216 12616 0.526524 GGAAGAGCGTCGTCATCAGG 60.527 60.000 0.00 0.00 0.00 3.86
6217 12617 0.526524 GAAGAGCGTCGTCATCAGGG 60.527 60.000 0.00 0.00 0.00 4.45
6218 12618 2.564553 AAGAGCGTCGTCATCAGGGC 62.565 60.000 0.00 0.00 0.00 5.19
6219 12619 4.148825 AGCGTCGTCATCAGGGCC 62.149 66.667 0.00 0.00 0.00 5.80
6222 12622 4.148825 GTCGTCATCAGGGCCGCT 62.149 66.667 0.00 0.00 0.00 5.52
6223 12623 3.838271 TCGTCATCAGGGCCGCTC 61.838 66.667 0.00 0.00 0.00 5.03
6224 12624 4.899239 CGTCATCAGGGCCGCTCC 62.899 72.222 0.00 0.00 0.00 4.70
6225 12625 3.474570 GTCATCAGGGCCGCTCCT 61.475 66.667 0.00 0.00 37.71 3.69
6226 12626 2.688666 TCATCAGGGCCGCTCCTT 60.689 61.111 0.00 0.00 34.31 3.36
6227 12627 2.273449 CATCAGGGCCGCTCCTTT 59.727 61.111 0.00 0.00 34.31 3.11
6228 12628 2.117156 CATCAGGGCCGCTCCTTTG 61.117 63.158 0.00 0.00 34.31 2.77
6229 12629 2.606587 ATCAGGGCCGCTCCTTTGT 61.607 57.895 0.00 0.00 34.31 2.83
6230 12630 2.826777 ATCAGGGCCGCTCCTTTGTG 62.827 60.000 0.00 0.00 34.31 3.33
6236 12636 2.427410 CGCTCCTTTGTGCGTTGC 60.427 61.111 0.00 0.00 46.34 4.17
6237 12637 2.050077 GCTCCTTTGTGCGTTGCC 60.050 61.111 0.00 0.00 0.00 4.52
6238 12638 2.252260 CTCCTTTGTGCGTTGCCG 59.748 61.111 0.00 0.00 37.07 5.69
6239 12639 2.515057 TCCTTTGTGCGTTGCCGT 60.515 55.556 0.00 0.00 36.15 5.68
6240 12640 2.058829 CTCCTTTGTGCGTTGCCGTT 62.059 55.000 0.00 0.00 36.15 4.44
6241 12641 1.657181 CCTTTGTGCGTTGCCGTTC 60.657 57.895 0.00 0.00 36.15 3.95
6242 12642 1.657181 CTTTGTGCGTTGCCGTTCC 60.657 57.895 0.00 0.00 36.15 3.62
6243 12643 2.999363 CTTTGTGCGTTGCCGTTCCC 62.999 60.000 0.00 0.00 36.15 3.97
6244 12644 4.555709 TGTGCGTTGCCGTTCCCT 62.556 61.111 0.00 0.00 36.15 4.20
6285 12685 1.834378 CCCTCCGCCTCTGCATCTA 60.834 63.158 0.00 0.00 37.32 1.98
6286 12686 1.664873 CCTCCGCCTCTGCATCTAG 59.335 63.158 0.00 0.00 37.32 2.43
6289 12689 0.395724 TCCGCCTCTGCATCTAGACA 60.396 55.000 0.00 0.00 37.32 3.41
6299 12699 3.703286 GCATCTAGACAATGCATGCAA 57.297 42.857 26.68 8.49 46.93 4.08
6380 12781 1.471676 CCGTCTAGGCAACATCTGTCC 60.472 57.143 0.00 0.00 41.41 4.02
6406 12807 3.713764 CTCCTATCCAGTTGATGAAGGGT 59.286 47.826 0.00 0.00 34.76 4.34
6421 12822 2.254152 AGGGTTGCTGATAGTCTGGA 57.746 50.000 0.00 0.00 0.00 3.86
6428 12829 4.944619 TGCTGATAGTCTGGACCTAATG 57.055 45.455 0.00 0.00 0.00 1.90
6429 12830 4.290093 TGCTGATAGTCTGGACCTAATGT 58.710 43.478 0.00 0.00 0.00 2.71
6531 12932 4.680237 CGGCGCACTCCTCAACCA 62.680 66.667 10.83 0.00 0.00 3.67
6604 13022 0.251922 TGTACCTTGCCCGGTCTAGT 60.252 55.000 0.00 0.00 38.49 2.57
6708 13126 4.100084 CCATGCCGCTGAGACCCA 62.100 66.667 0.00 0.00 0.00 4.51
6720 13138 2.079020 GAGACCCACCGTTGTCGACA 62.079 60.000 15.76 15.76 39.71 4.35
6726 13144 1.213491 CACCGTTGTCGACATGTCAA 58.787 50.000 24.93 10.29 39.71 3.18
6760 13178 0.980231 CTCCTCTTGTCCCCTCCAGG 60.980 65.000 0.00 0.00 0.00 4.45
6761 13179 1.081092 CCTCTTGTCCCCTCCAGGA 59.919 63.158 0.00 0.00 38.24 3.86
6762 13180 0.980231 CCTCTTGTCCCCTCCAGGAG 60.980 65.000 9.90 9.90 36.30 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 93 1.313812 CCTTGTCGACGGAGGCTAGT 61.314 60.000 20.61 0.00 0.00 2.57
98 99 1.080025 GGTTCCCTTGTCGACGGAG 60.080 63.158 11.62 11.14 0.00 4.63
123 124 0.798389 GTCGTAAGTCGTAACCCGGC 60.798 60.000 0.00 0.00 42.97 6.13
171 179 0.878523 TGCAGTTGGTCTCGGTTTCG 60.879 55.000 0.00 0.00 37.82 3.46
219 227 1.152860 CTCGCTCTCCCTGGCTCTA 60.153 63.158 0.00 0.00 0.00 2.43
280 294 3.653122 TACTCCTCCCCCTTGGCCC 62.653 68.421 0.00 0.00 0.00 5.80
281 295 0.994050 ATTACTCCTCCCCCTTGGCC 60.994 60.000 0.00 0.00 0.00 5.36
282 296 0.183731 CATTACTCCTCCCCCTTGGC 59.816 60.000 0.00 0.00 0.00 4.52
283 297 0.846693 CCATTACTCCTCCCCCTTGG 59.153 60.000 0.00 0.00 0.00 3.61
284 298 1.490910 GACCATTACTCCTCCCCCTTG 59.509 57.143 0.00 0.00 0.00 3.61
285 299 1.894699 GACCATTACTCCTCCCCCTT 58.105 55.000 0.00 0.00 0.00 3.95
330 344 2.224523 TGCCCTCTGAATTATAAGCCCG 60.225 50.000 0.00 0.00 0.00 6.13
357 372 2.091588 CACTGTGCCATTCGTACGTTAC 59.908 50.000 16.05 7.16 0.00 2.50
358 373 2.030096 TCACTGTGCCATTCGTACGTTA 60.030 45.455 16.05 5.21 0.00 3.18
359 374 1.144969 CACTGTGCCATTCGTACGTT 58.855 50.000 16.05 1.09 0.00 3.99
360 375 0.315886 TCACTGTGCCATTCGTACGT 59.684 50.000 16.05 0.00 0.00 3.57
368 383 2.303890 TGATCTCACTTCACTGTGCCAT 59.696 45.455 2.12 0.00 37.81 4.40
386 401 9.261180 GAGAATCAATCAAAATCAATGCATGAT 57.739 29.630 0.00 2.75 42.77 2.45
412 427 1.388547 CCATGTAATCCAACACCCCG 58.611 55.000 0.00 0.00 30.75 5.73
445 460 4.053469 TCAGTGAATGAACGAGACAACA 57.947 40.909 0.00 0.00 34.02 3.33
452 467 4.743057 AGGATCATCAGTGAATGAACGA 57.257 40.909 0.00 0.00 42.53 3.85
474 489 1.671054 CCACCGGTGAATGAACGCT 60.671 57.895 36.07 0.00 0.00 5.07
510 525 2.442272 CTGGACGGGGAGGACGAT 60.442 66.667 0.00 0.00 34.93 3.73
542 559 1.802365 GTCAAACACCACCCGTACATC 59.198 52.381 0.00 0.00 0.00 3.06
576 596 5.759506 TTCCTTACGAATTTTCACAGCAA 57.240 34.783 0.00 0.00 0.00 3.91
617 642 6.346919 CCATTTTTCCTGATGATCGTCGTATC 60.347 42.308 10.32 0.00 0.00 2.24
640 670 1.538512 GATCGCCGTATGCTACTACCA 59.461 52.381 0.00 0.00 38.05 3.25
686 719 1.159713 GGATTCATCCGTGCGCATCA 61.160 55.000 15.91 0.00 37.19 3.07
722 764 3.126171 CACTCGCAACATTTCGGGATTTA 59.874 43.478 0.00 0.00 0.00 1.40
749 791 5.338708 CCCTCAATTCTACTCCACTTGTCAT 60.339 44.000 0.00 0.00 0.00 3.06
1063 1504 5.539193 TCGAGGATTAGGGAGGTTTCTAATC 59.461 44.000 12.19 12.19 45.29 1.75
1065 1506 4.875389 TCGAGGATTAGGGAGGTTTCTAA 58.125 43.478 0.00 0.00 0.00 2.10
1066 1507 4.471548 CTCGAGGATTAGGGAGGTTTCTA 58.528 47.826 3.91 0.00 0.00 2.10
1098 1550 2.463876 GCTGTGCAAAACCTGAGAAAC 58.536 47.619 0.00 0.00 0.00 2.78
1138 2063 1.413077 GTGGATAGAAGGGGGTCGAAG 59.587 57.143 0.00 0.00 0.00 3.79
1308 2234 1.334384 GGAGAAGTGGAGGAGAGGGC 61.334 65.000 0.00 0.00 0.00 5.19
1513 2442 9.173021 CATGTTTGATAGACAGGGTTTGTATAA 57.827 33.333 0.00 0.00 41.05 0.98
1555 2484 3.834231 CCTCACATCCCCAAGTTTTCAAT 59.166 43.478 0.00 0.00 0.00 2.57
1577 2506 1.133668 CACCCAATCCTCTCCATTCCC 60.134 57.143 0.00 0.00 0.00 3.97
1589 2518 2.899303 TCCCTTTCTTCCACCCAATC 57.101 50.000 0.00 0.00 0.00 2.67
1624 2553 1.568118 TTCGGGGAGGTGGGGATTTC 61.568 60.000 0.00 0.00 0.00 2.17
1656 2585 0.784778 GTCGAGCGTTTGACAGGAAG 59.215 55.000 14.19 0.00 37.61 3.46
1659 2588 1.006102 AGGTCGAGCGTTTGACAGG 60.006 57.895 19.76 0.00 39.16 4.00
1660 2589 0.318699 TCAGGTCGAGCGTTTGACAG 60.319 55.000 19.76 12.18 39.16 3.51
1858 2800 7.500227 TCATTACCAGCCATCATAAGAAAGAAG 59.500 37.037 0.00 0.00 0.00 2.85
1900 2869 5.300034 TCCAAATATTTCACTAGCAGCCATG 59.700 40.000 0.00 0.00 0.00 3.66
2002 2975 3.804036 TCTACACCACCACAAAAGTCAG 58.196 45.455 0.00 0.00 0.00 3.51
2081 3056 4.938226 CCTTCACTTTCTCCATCTACAACC 59.062 45.833 0.00 0.00 0.00 3.77
2108 3087 3.132646 GCCAATATCCCAAATTGCTCACA 59.867 43.478 0.00 0.00 33.80 3.58
2110 3089 3.372897 TGCCAATATCCCAAATTGCTCA 58.627 40.909 0.00 0.00 33.80 4.26
2187 3166 8.301002 CCTAGGCTAGAACTATGTACTGAATTC 58.699 40.741 22.99 0.00 0.00 2.17
2218 3197 9.809096 ATGTGTTGTGTAATGAAATGTTTGTAA 57.191 25.926 0.00 0.00 0.00 2.41
2232 3211 7.793927 TGAGATTGTTGTATGTGTTGTGTAA 57.206 32.000 0.00 0.00 0.00 2.41
2233 3212 7.977789 ATGAGATTGTTGTATGTGTTGTGTA 57.022 32.000 0.00 0.00 0.00 2.90
2260 3239 2.224719 ACAGAATCAGCTGCCAGTTCTT 60.225 45.455 9.47 4.86 39.51 2.52
2321 3300 2.945008 CACACTGAGCCAGTTCTTTTCA 59.055 45.455 5.24 0.00 42.59 2.69
2337 3316 0.178068 ACCACGCTCTGAAACACACT 59.822 50.000 0.00 0.00 0.00 3.55
2428 3411 2.974935 TGTGGTTACGACACACGGCC 62.975 60.000 0.00 0.00 43.35 6.13
2457 3902 6.759497 AATCAGCTGGTTAACTATTTCCAC 57.241 37.500 11.42 0.00 0.00 4.02
2461 3906 8.823220 ACCATTAATCAGCTGGTTAACTATTT 57.177 30.769 29.69 14.19 40.34 1.40
2545 3990 0.179108 GGTAACTGGTAGCTGCTCGG 60.179 60.000 4.91 0.00 0.00 4.63
2583 5420 3.320673 AAGAAAGCAACCTAGTCCTCG 57.679 47.619 0.00 0.00 0.00 4.63
2607 5444 1.952296 AGTACTACGGCCACTAATCGG 59.048 52.381 2.24 0.00 0.00 4.18
2609 5446 4.499357 CCTGAAGTACTACGGCCACTAATC 60.499 50.000 2.24 0.00 0.00 1.75
2613 5450 1.183549 CCTGAAGTACTACGGCCACT 58.816 55.000 2.24 0.00 0.00 4.00
2614 5451 1.180029 TCCTGAAGTACTACGGCCAC 58.820 55.000 2.24 0.00 0.00 5.01
2661 5498 3.244422 TGGGATCCAACGCCACTTATATC 60.244 47.826 15.23 0.00 0.00 1.63
2699 5536 5.467035 TTTAGGCTCTTTTTGATGGGTTG 57.533 39.130 0.00 0.00 0.00 3.77
2700 5537 5.046376 CCATTTAGGCTCTTTTTGATGGGTT 60.046 40.000 0.00 0.00 31.43 4.11
2741 5579 5.247110 TGGGCTGTCCATTTGCTATTTTTAA 59.753 36.000 0.00 0.00 41.46 1.52
2814 5659 4.547367 GATCGGGGGTTGGAGGCG 62.547 72.222 0.00 0.00 0.00 5.52
2815 5660 4.191015 GGATCGGGGGTTGGAGGC 62.191 72.222 0.00 0.00 0.00 4.70
2817 5662 1.383248 AGAGGATCGGGGGTTGGAG 60.383 63.158 0.00 0.00 42.67 3.86
2818 5663 1.382695 GAGAGGATCGGGGGTTGGA 60.383 63.158 0.00 0.00 42.67 3.53
2819 5664 2.444256 GGAGAGGATCGGGGGTTGG 61.444 68.421 0.00 0.00 42.67 3.77
2820 5665 2.797278 CGGAGAGGATCGGGGGTTG 61.797 68.421 0.00 0.00 42.67 3.77
2821 5666 2.444140 CGGAGAGGATCGGGGGTT 60.444 66.667 0.00 0.00 42.67 4.11
2822 5667 3.752167 ACGGAGAGGATCGGGGGT 61.752 66.667 0.00 0.00 42.67 4.95
2823 5668 3.227276 CACGGAGAGGATCGGGGG 61.227 72.222 0.00 0.00 42.67 5.40
2824 5669 3.227276 CCACGGAGAGGATCGGGG 61.227 72.222 0.00 0.00 42.26 5.73
2826 5671 1.038130 AAGACCACGGAGAGGATCGG 61.038 60.000 0.00 0.00 42.26 4.18
2828 5673 0.747852 GGAAGACCACGGAGAGGATC 59.252 60.000 0.00 0.00 42.26 3.36
2841 5714 1.107945 CGGGAGAAGAGGAGGAAGAC 58.892 60.000 0.00 0.00 0.00 3.01
2844 5717 1.686110 GGCGGGAGAAGAGGAGGAA 60.686 63.158 0.00 0.00 0.00 3.36
2857 5730 1.024579 ATCGTTGCTTACTTGGCGGG 61.025 55.000 0.00 0.00 0.00 6.13
2860 5733 0.733150 GGGATCGTTGCTTACTTGGC 59.267 55.000 0.00 0.00 0.00 4.52
2890 5770 2.613223 GGAGACAAAAGAACTCGGAGGG 60.613 54.545 10.23 0.00 0.00 4.30
2893 5773 2.698797 AGTGGAGACAAAAGAACTCGGA 59.301 45.455 0.00 0.00 46.06 4.55
2894 5774 3.113260 AGTGGAGACAAAAGAACTCGG 57.887 47.619 0.00 0.00 46.06 4.63
2898 5779 8.779354 ATAATCAGTAGTGGAGACAAAAGAAC 57.221 34.615 0.00 0.00 46.06 3.01
2957 5870 8.395633 GTTACACCAAATGATCATTACAGTACC 58.604 37.037 21.00 10.51 0.00 3.34
2983 5896 1.344438 TCAGCAGTACAGGAGGTGTTG 59.656 52.381 0.00 0.00 40.94 3.33
2987 5900 2.224548 GGTTTTCAGCAGTACAGGAGGT 60.225 50.000 0.00 0.00 0.00 3.85
2988 5901 2.039084 AGGTTTTCAGCAGTACAGGAGG 59.961 50.000 0.00 0.00 0.00 4.30
3012 5926 6.094325 AACTTCTGCAGTACTAGCACTACTAG 59.906 42.308 14.67 9.85 44.12 2.57
3013 5927 5.498393 ACTTCTGCAGTACTAGCACTACTA 58.502 41.667 14.67 0.00 37.02 1.82
3014 5928 4.337145 ACTTCTGCAGTACTAGCACTACT 58.663 43.478 14.67 0.00 37.02 2.57
3015 5929 4.705337 ACTTCTGCAGTACTAGCACTAC 57.295 45.455 14.67 0.00 37.02 2.73
3016 5930 6.829229 TTAACTTCTGCAGTACTAGCACTA 57.171 37.500 14.67 5.23 37.02 2.74
3017 5931 5.723672 TTAACTTCTGCAGTACTAGCACT 57.276 39.130 14.67 0.00 37.02 4.40
3018 5932 6.100004 TCATTAACTTCTGCAGTACTAGCAC 58.900 40.000 14.67 0.00 37.02 4.40
3019 5933 6.071334 ACTCATTAACTTCTGCAGTACTAGCA 60.071 38.462 14.67 15.92 40.19 3.49
3020 5934 6.334202 ACTCATTAACTTCTGCAGTACTAGC 58.666 40.000 14.67 2.56 32.94 3.42
3226 6144 4.512571 GGACAACTTTAGCCTACGAAACAA 59.487 41.667 0.00 0.00 0.00 2.83
3232 6150 2.754946 TGGGACAACTTTAGCCTACG 57.245 50.000 0.00 0.00 31.92 3.51
3297 6215 4.001618 TGTGATTCTCATCGGAACAACA 57.998 40.909 0.00 0.00 31.08 3.33
3299 6217 4.872124 CAGATGTGATTCTCATCGGAACAA 59.128 41.667 18.19 0.00 44.20 2.83
3308 6226 4.694339 CTCATGCTCAGATGTGATTCTCA 58.306 43.478 0.00 0.00 30.18 3.27
3319 6237 2.629051 CACTTGATGCTCATGCTCAGA 58.371 47.619 0.00 0.00 40.48 3.27
3373 6298 3.947834 GCCAGACACTTAATATGCTTGGT 59.052 43.478 9.86 0.00 0.00 3.67
3390 7656 0.250945 TATGTGGGTTTTGCGCCAGA 60.251 50.000 4.18 0.00 0.00 3.86
3556 7822 1.213296 GGGGCAGATCTTAAGTGGGA 58.787 55.000 1.63 0.00 0.00 4.37
3616 7882 1.110442 TCCCACACAACAAAGCCAAG 58.890 50.000 0.00 0.00 0.00 3.61
3617 7883 0.820871 GTCCCACACAACAAAGCCAA 59.179 50.000 0.00 0.00 0.00 4.52
3679 7945 6.426937 GTCACTGTGCAAGAAAGGAAGTTATA 59.573 38.462 2.12 0.00 0.00 0.98
4132 8415 5.365025 AGCCTTCAGACAGTATCACATATGT 59.635 40.000 1.41 1.41 0.00 2.29
4249 8542 5.163248 TGGGATGTGTCTCAAGTAAGTGAAA 60.163 40.000 0.00 0.00 30.00 2.69
4281 8576 6.494893 TTCAGGATCGAAATTTTGAACGAT 57.505 33.333 12.14 11.55 45.77 3.73
4302 8597 7.988028 ACATAACTCTGAGCCTAGGTAAAATTC 59.012 37.037 11.31 0.19 0.00 2.17
4305 8600 6.439375 TGACATAACTCTGAGCCTAGGTAAAA 59.561 38.462 11.31 0.00 0.00 1.52
4312 8607 5.337571 CCTGTTTGACATAACTCTGAGCCTA 60.338 44.000 4.19 0.00 0.00 3.93
4320 8615 9.141400 CTTTACTAGACCTGTTTGACATAACTC 57.859 37.037 0.00 0.00 0.00 3.01
4406 8702 9.586435 GCAATAGATTGTTAAACTTAAAGCCAT 57.414 29.630 4.27 0.00 39.88 4.40
4494 8791 8.737168 TCAGGGTAACTAATTGATGAAATGAG 57.263 34.615 0.00 0.00 33.32 2.90
4515 8812 3.947910 AAATTGTCCAGTGCATTCAGG 57.052 42.857 0.00 0.00 0.00 3.86
4634 10871 4.707030 TGAGGCAGCATCAAACTTTATG 57.293 40.909 7.44 0.00 0.00 1.90
4658 10896 1.268079 GACAACTTCAAGCCTTGAGCC 59.732 52.381 7.29 0.00 45.47 4.70
4677 10915 1.774254 TCCAACCAAAGAAGCCAGAGA 59.226 47.619 0.00 0.00 0.00 3.10
4684 10922 2.426738 TGCACAAGTCCAACCAAAGAAG 59.573 45.455 0.00 0.00 0.00 2.85
4701 10939 9.329913 CTATAAATGTTTGTAAACTGACTGCAC 57.670 33.333 8.74 0.00 39.59 4.57
4722 10960 9.127277 GGGTTTATAAATGTGCAAGACCTATAA 57.873 33.333 0.31 0.00 0.00 0.98
4760 10998 7.609056 ACTAGTACGTATGACTGGAAATGTTT 58.391 34.615 7.25 0.00 0.00 2.83
4765 11003 7.255569 CAATGACTAGTACGTATGACTGGAAA 58.744 38.462 7.25 0.00 0.00 3.13
4769 11007 5.067413 ACCCAATGACTAGTACGTATGACTG 59.933 44.000 0.00 0.00 0.00 3.51
4770 11008 5.198965 ACCCAATGACTAGTACGTATGACT 58.801 41.667 0.00 0.00 0.00 3.41
4771 11009 5.511234 ACCCAATGACTAGTACGTATGAC 57.489 43.478 0.00 0.00 0.00 3.06
4773 11011 6.183360 TGTGTACCCAATGACTAGTACGTATG 60.183 42.308 0.00 0.00 38.31 2.39
4774 11012 5.887598 TGTGTACCCAATGACTAGTACGTAT 59.112 40.000 0.00 0.00 38.31 3.06
4775 11013 5.252547 TGTGTACCCAATGACTAGTACGTA 58.747 41.667 0.00 0.00 38.31 3.57
4776 11014 4.081406 TGTGTACCCAATGACTAGTACGT 58.919 43.478 0.00 0.00 38.31 3.57
4777 11015 4.707030 TGTGTACCCAATGACTAGTACG 57.293 45.455 0.00 0.00 38.31 3.67
4778 11016 6.976925 GTGTATGTGTACCCAATGACTAGTAC 59.023 42.308 0.00 0.00 36.47 2.73
4779 11017 6.183360 CGTGTATGTGTACCCAATGACTAGTA 60.183 42.308 0.00 0.00 0.00 1.82
4780 11018 5.393787 CGTGTATGTGTACCCAATGACTAGT 60.394 44.000 0.00 0.00 0.00 2.57
4781 11019 5.041287 CGTGTATGTGTACCCAATGACTAG 58.959 45.833 0.00 0.00 0.00 2.57
4783 11021 3.512329 TCGTGTATGTGTACCCAATGACT 59.488 43.478 0.00 0.00 0.00 3.41
4784 11022 3.852286 TCGTGTATGTGTACCCAATGAC 58.148 45.455 0.00 0.00 0.00 3.06
4786 11024 4.026062 CGAATCGTGTATGTGTACCCAATG 60.026 45.833 0.00 0.00 0.00 2.82
4787 11025 4.116961 CGAATCGTGTATGTGTACCCAAT 58.883 43.478 0.00 0.00 0.00 3.16
4788 11026 3.056678 ACGAATCGTGTATGTGTACCCAA 60.057 43.478 7.77 0.00 39.18 4.12
4789 11027 2.492881 ACGAATCGTGTATGTGTACCCA 59.507 45.455 7.77 0.00 39.18 4.51
4791 11029 3.549070 GGAACGAATCGTGTATGTGTACC 59.451 47.826 9.74 0.00 39.99 3.34
4792 11030 4.168014 TGGAACGAATCGTGTATGTGTAC 58.832 43.478 9.74 0.00 39.99 2.90
4793 11031 4.082625 ACTGGAACGAATCGTGTATGTGTA 60.083 41.667 9.74 0.00 39.99 2.90
4794 11032 3.250744 CTGGAACGAATCGTGTATGTGT 58.749 45.455 9.74 0.00 39.99 3.72
4795 11033 3.250744 ACTGGAACGAATCGTGTATGTG 58.749 45.455 9.74 0.83 39.99 3.21
4796 11034 3.192844 AGACTGGAACGAATCGTGTATGT 59.807 43.478 9.74 6.76 39.99 2.29
4797 11035 3.770666 AGACTGGAACGAATCGTGTATG 58.229 45.455 9.74 3.39 39.99 2.39
4798 11036 4.421948 GAAGACTGGAACGAATCGTGTAT 58.578 43.478 9.74 0.00 39.99 2.29
4799 11037 3.366679 GGAAGACTGGAACGAATCGTGTA 60.367 47.826 9.74 0.00 39.99 2.90
4800 11038 2.609737 GGAAGACTGGAACGAATCGTGT 60.610 50.000 9.74 2.08 39.99 4.49
4801 11039 1.993370 GGAAGACTGGAACGAATCGTG 59.007 52.381 9.74 0.00 39.99 4.35
4802 11040 1.616865 TGGAAGACTGGAACGAATCGT 59.383 47.619 0.96 0.96 43.97 3.73
4803 11041 2.263077 CTGGAAGACTGGAACGAATCG 58.737 52.381 0.00 0.00 34.07 3.34
4804 11042 2.996621 CACTGGAAGACTGGAACGAATC 59.003 50.000 0.00 0.00 37.43 2.52
4805 11043 2.289694 CCACTGGAAGACTGGAACGAAT 60.290 50.000 0.00 0.00 32.07 3.34
4808 11046 0.951040 GCCACTGGAAGACTGGAACG 60.951 60.000 0.00 0.00 32.07 3.95
4809 11047 0.108585 TGCCACTGGAAGACTGGAAC 59.891 55.000 0.00 0.00 32.07 3.62
4810 11048 0.108585 GTGCCACTGGAAGACTGGAA 59.891 55.000 0.00 0.00 32.07 3.53
4813 11051 1.302832 GGGTGCCACTGGAAGACTG 60.303 63.158 0.00 0.00 37.43 3.51
4814 11052 1.352622 TTGGGTGCCACTGGAAGACT 61.353 55.000 0.00 0.00 37.43 3.24
4815 11053 0.251341 ATTGGGTGCCACTGGAAGAC 60.251 55.000 0.00 0.00 37.43 3.01
4816 11054 0.482446 AATTGGGTGCCACTGGAAGA 59.518 50.000 0.00 0.00 37.43 2.87
4817 11055 0.890683 GAATTGGGTGCCACTGGAAG 59.109 55.000 0.00 0.00 42.29 3.46
4820 11058 1.205417 GATTGAATTGGGTGCCACTGG 59.795 52.381 0.00 0.00 30.78 4.00
4821 11059 1.205417 GGATTGAATTGGGTGCCACTG 59.795 52.381 0.00 0.00 30.78 3.66
4824 11062 1.076841 TCAGGATTGAATTGGGTGCCA 59.923 47.619 0.00 0.00 0.00 4.92
4825 11063 1.478105 GTCAGGATTGAATTGGGTGCC 59.522 52.381 0.00 0.00 34.49 5.01
4827 11065 6.321945 TCATTATGTCAGGATTGAATTGGGTG 59.678 38.462 0.00 0.00 34.49 4.61
4828 11066 6.434302 TCATTATGTCAGGATTGAATTGGGT 58.566 36.000 0.00 0.00 34.49 4.51
4829 11067 6.964807 TCATTATGTCAGGATTGAATTGGG 57.035 37.500 0.00 0.00 34.49 4.12
4830 11068 7.375834 CCATCATTATGTCAGGATTGAATTGG 58.624 38.462 0.00 0.00 34.49 3.16
4832 11070 6.551975 TGCCATCATTATGTCAGGATTGAATT 59.448 34.615 4.99 0.00 34.49 2.17
4833 11071 6.072649 TGCCATCATTATGTCAGGATTGAAT 58.927 36.000 4.99 0.00 34.49 2.57
4834 11072 5.447757 TGCCATCATTATGTCAGGATTGAA 58.552 37.500 4.99 0.00 34.49 2.69
4835 11073 5.051409 TGCCATCATTATGTCAGGATTGA 57.949 39.130 4.99 0.00 0.00 2.57
4836 11074 5.710567 AGATGCCATCATTATGTCAGGATTG 59.289 40.000 7.56 0.00 31.96 2.67
4838 11076 5.013808 TGAGATGCCATCATTATGTCAGGAT 59.986 40.000 7.56 0.00 31.96 3.24
4839 11077 4.348754 TGAGATGCCATCATTATGTCAGGA 59.651 41.667 7.56 0.00 31.96 3.86
4840 11078 4.648651 TGAGATGCCATCATTATGTCAGG 58.351 43.478 7.56 0.00 31.96 3.86
4841 11079 5.333875 CGTTGAGATGCCATCATTATGTCAG 60.334 44.000 7.56 0.00 31.96 3.51
4842 11080 4.512571 CGTTGAGATGCCATCATTATGTCA 59.487 41.667 7.56 0.00 31.96 3.58
4843 11081 4.083643 CCGTTGAGATGCCATCATTATGTC 60.084 45.833 7.56 0.00 31.96 3.06
4844 11082 3.817084 CCGTTGAGATGCCATCATTATGT 59.183 43.478 7.56 0.00 31.96 2.29
4845 11083 4.067192 TCCGTTGAGATGCCATCATTATG 58.933 43.478 7.56 0.00 31.96 1.90
4846 11084 4.202398 ACTCCGTTGAGATGCCATCATTAT 60.202 41.667 7.56 0.00 41.42 1.28
4847 11085 3.134623 ACTCCGTTGAGATGCCATCATTA 59.865 43.478 7.56 0.00 41.42 1.90
4851 11089 1.576356 GACTCCGTTGAGATGCCATC 58.424 55.000 0.00 0.00 41.42 3.51
4852 11090 0.179000 GGACTCCGTTGAGATGCCAT 59.821 55.000 0.00 0.00 41.42 4.40
4853 11091 1.191489 TGGACTCCGTTGAGATGCCA 61.191 55.000 0.00 0.00 41.42 4.92
4855 11093 2.029838 AATGGACTCCGTTGAGATGC 57.970 50.000 1.35 0.00 41.42 3.91
4856 11094 3.599343 TGAAATGGACTCCGTTGAGATG 58.401 45.455 3.11 0.00 41.42 2.90
4857 11095 3.866651 CTGAAATGGACTCCGTTGAGAT 58.133 45.455 3.11 0.00 41.42 2.75
4859 11097 1.734465 GCTGAAATGGACTCCGTTGAG 59.266 52.381 3.11 4.52 44.62 3.02
4860 11098 1.071542 TGCTGAAATGGACTCCGTTGA 59.928 47.619 3.11 0.00 32.46 3.18
4862 11100 1.072331 ACTGCTGAAATGGACTCCGTT 59.928 47.619 0.00 0.00 33.67 4.44
4863 11101 0.687354 ACTGCTGAAATGGACTCCGT 59.313 50.000 0.00 0.00 0.00 4.69
4864 11102 1.813513 AACTGCTGAAATGGACTCCG 58.186 50.000 0.00 0.00 0.00 4.63
4865 11103 3.935828 GACTAACTGCTGAAATGGACTCC 59.064 47.826 0.00 0.00 0.00 3.85
4866 11104 4.390297 GTGACTAACTGCTGAAATGGACTC 59.610 45.833 0.00 0.00 0.00 3.36
4868 11106 4.065088 TGTGACTAACTGCTGAAATGGAC 58.935 43.478 0.00 0.00 0.00 4.02
4869 11107 4.065088 GTGTGACTAACTGCTGAAATGGA 58.935 43.478 0.00 0.00 0.00 3.41
4870 11108 4.067896 AGTGTGACTAACTGCTGAAATGG 58.932 43.478 0.00 0.00 0.00 3.16
4871 11109 4.751600 TCAGTGTGACTAACTGCTGAAATG 59.248 41.667 0.00 0.00 43.88 2.32
4872 11110 4.960938 TCAGTGTGACTAACTGCTGAAAT 58.039 39.130 0.00 0.00 43.88 2.17
4875 11113 2.959030 ACTCAGTGTGACTAACTGCTGA 59.041 45.455 0.00 0.00 43.88 4.26
4876 11114 3.377346 ACTCAGTGTGACTAACTGCTG 57.623 47.619 0.00 0.00 43.88 4.41
4889 11214 2.943345 GCGTCCGTTGCACTCAGTG 61.943 63.158 0.00 0.00 36.51 3.66
4893 11218 1.891060 CTGAAGCGTCCGTTGCACTC 61.891 60.000 0.00 0.00 33.85 3.51
4957 11290 0.664224 GGCGACTCAGCTACCTCTAC 59.336 60.000 0.00 0.00 37.29 2.59
4962 11295 2.837371 AAAGCGGCGACTCAGCTACC 62.837 60.000 12.98 0.00 45.46 3.18
4999 11332 1.004918 CCGACCTCAACACCTGGAC 60.005 63.158 0.00 0.00 0.00 4.02
5001 11334 2.358737 GCCGACCTCAACACCTGG 60.359 66.667 0.00 0.00 0.00 4.45
5403 11745 1.444383 GATGAGCGACTGCACGACA 60.444 57.895 0.24 0.86 46.23 4.35
5480 11822 2.008268 AACAGGCACACAACAGCAGC 62.008 55.000 0.00 0.00 0.00 5.25
5481 11823 0.248743 CAACAGGCACACAACAGCAG 60.249 55.000 0.00 0.00 0.00 4.24
5494 11836 2.192608 GAAAGCAGAGCGCCAACAGG 62.193 60.000 2.29 0.00 44.04 4.00
5501 11843 2.698020 GCGTAGAAAGCAGAGCGC 59.302 61.111 0.00 0.00 42.91 5.92
5538 11880 1.444895 GCGCATTCAACCAAGCCAG 60.445 57.895 0.30 0.00 0.00 4.85
5639 11995 6.564709 TGACATTTTCTTTCACATGGAGAG 57.435 37.500 0.00 0.00 0.00 3.20
5645 12001 6.266103 AGTGTGGATGACATTTTCTTTCACAT 59.734 34.615 3.84 0.00 45.26 3.21
5649 12005 6.638468 GTCAAGTGTGGATGACATTTTCTTTC 59.362 38.462 1.30 0.00 44.19 2.62
5650 12006 6.507023 GTCAAGTGTGGATGACATTTTCTTT 58.493 36.000 1.30 0.00 44.19 2.52
5651 12007 6.076981 GTCAAGTGTGGATGACATTTTCTT 57.923 37.500 1.30 0.00 44.19 2.52
5652 12008 5.695851 GTCAAGTGTGGATGACATTTTCT 57.304 39.130 1.30 0.00 44.19 2.52
5663 12019 3.360867 ACACCAAAATGTCAAGTGTGGA 58.639 40.909 3.60 0.00 40.04 4.02
5694 12053 6.038997 ACAACAGAAATGGTACTCCTACTC 57.961 41.667 0.00 0.00 34.23 2.59
5755 12114 1.480498 CCCACACCAAACCTAGGCTTT 60.480 52.381 9.30 6.11 0.00 3.51
5785 12144 4.467084 GGGAATCCGTCGCAGGCA 62.467 66.667 0.00 0.00 39.02 4.75
5837 12227 3.752167 GGACCTCCCTCCCTCGGA 61.752 72.222 0.00 0.00 0.00 4.55
5893 12287 0.035534 TTGCTATCGCCAAAGGAGCA 60.036 50.000 0.00 0.00 41.23 4.26
5894 12288 1.094785 TTTGCTATCGCCAAAGGAGC 58.905 50.000 0.00 0.00 34.43 4.70
5895 12289 3.411415 CTTTTGCTATCGCCAAAGGAG 57.589 47.619 7.65 0.00 42.21 3.69
5940 12334 2.417516 GGCCAGAATCGCTCGCTA 59.582 61.111 0.00 0.00 30.78 4.26
6018 12418 3.723348 GTTTGCCTCGTGCCCGTC 61.723 66.667 0.00 0.00 40.16 4.79
6021 12421 3.670377 GGTGTTTGCCTCGTGCCC 61.670 66.667 0.00 0.00 40.16 5.36
6082 12482 1.146263 ATCAGTCGGCCGGGATTTC 59.854 57.895 27.83 9.10 0.00 2.17
6136 12536 4.662961 CTGTCCTCACGCGTGGCA 62.663 66.667 36.41 26.33 0.00 4.92
6144 12544 1.066286 AGAAGATGCTGCTGTCCTCAC 60.066 52.381 0.00 0.00 0.00 3.51
6145 12545 1.206610 GAGAAGATGCTGCTGTCCTCA 59.793 52.381 0.00 0.00 0.00 3.86
6146 12546 1.473080 GGAGAAGATGCTGCTGTCCTC 60.473 57.143 0.00 0.00 0.00 3.71
6147 12547 0.540923 GGAGAAGATGCTGCTGTCCT 59.459 55.000 0.00 0.00 0.00 3.85
6148 12548 0.540923 AGGAGAAGATGCTGCTGTCC 59.459 55.000 0.00 0.00 35.09 4.02
6149 12549 1.473080 GGAGGAGAAGATGCTGCTGTC 60.473 57.143 0.00 0.00 36.65 3.51
6150 12550 0.540923 GGAGGAGAAGATGCTGCTGT 59.459 55.000 0.00 0.00 36.65 4.40
6151 12551 0.179051 GGGAGGAGAAGATGCTGCTG 60.179 60.000 0.00 0.00 37.85 4.41
6152 12552 1.344191 GGGGAGGAGAAGATGCTGCT 61.344 60.000 0.00 0.00 37.85 4.24
6153 12553 1.148048 GGGGAGGAGAAGATGCTGC 59.852 63.158 0.00 0.00 36.94 5.25
6154 12554 0.693767 AGGGGGAGGAGAAGATGCTG 60.694 60.000 0.00 0.00 0.00 4.41
6155 12555 0.693767 CAGGGGGAGGAGAAGATGCT 60.694 60.000 0.00 0.00 0.00 3.79
6156 12556 1.704007 CCAGGGGGAGGAGAAGATGC 61.704 65.000 0.00 0.00 35.59 3.91
6157 12557 0.030705 TCCAGGGGGAGGAGAAGATG 60.031 60.000 0.00 0.00 38.64 2.90
6158 12558 0.725133 TTCCAGGGGGAGGAGAAGAT 59.275 55.000 0.00 0.00 46.01 2.40
6159 12559 0.043334 CTTCCAGGGGGAGGAGAAGA 59.957 60.000 0.00 0.00 46.01 2.87
6160 12560 0.043334 TCTTCCAGGGGGAGGAGAAG 59.957 60.000 0.00 0.00 43.74 2.85
6161 12561 2.193174 TCTTCCAGGGGGAGGAGAA 58.807 57.895 0.00 0.00 43.74 2.87
6162 12562 3.969914 TCTTCCAGGGGGAGGAGA 58.030 61.111 0.00 0.00 43.74 3.71
6165 12565 1.004758 TGGATCTTCCAGGGGGAGG 59.995 63.158 0.00 0.00 42.67 4.30
6166 12566 4.838307 TGGATCTTCCAGGGGGAG 57.162 61.111 0.00 0.00 42.67 4.30
6173 12573 2.018644 GCGCTTGGATTGGATCTTCCA 61.019 52.381 0.00 8.05 46.61 3.53
6174 12574 0.665298 GCGCTTGGATTGGATCTTCC 59.335 55.000 0.00 0.00 36.96 3.46
6175 12575 0.305922 CGCGCTTGGATTGGATCTTC 59.694 55.000 5.56 0.00 0.00 2.87
6176 12576 1.718757 GCGCGCTTGGATTGGATCTT 61.719 55.000 26.67 0.00 0.00 2.40
6177 12577 2.182842 GCGCGCTTGGATTGGATCT 61.183 57.895 26.67 0.00 0.00 2.75
6178 12578 2.329339 GCGCGCTTGGATTGGATC 59.671 61.111 26.67 0.00 0.00 3.36
6179 12579 2.438254 TGCGCGCTTGGATTGGAT 60.438 55.556 33.29 0.00 0.00 3.41
6180 12580 3.126879 CTGCGCGCTTGGATTGGA 61.127 61.111 33.29 7.29 0.00 3.53
6181 12581 4.183686 CCTGCGCGCTTGGATTGG 62.184 66.667 33.29 17.25 0.00 3.16
6182 12582 2.588146 CTTCCTGCGCGCTTGGATTG 62.588 60.000 33.98 27.05 0.00 2.67
6183 12583 2.359850 TTCCTGCGCGCTTGGATT 60.360 55.556 33.98 0.00 0.00 3.01
6184 12584 2.821366 CTTCCTGCGCGCTTGGAT 60.821 61.111 33.98 0.00 0.00 3.41
6185 12585 3.939837 CTCTTCCTGCGCGCTTGGA 62.940 63.158 31.59 31.59 0.00 3.53
6186 12586 3.494336 CTCTTCCTGCGCGCTTGG 61.494 66.667 33.29 30.65 0.00 3.61
6187 12587 4.157958 GCTCTTCCTGCGCGCTTG 62.158 66.667 33.29 23.46 0.00 4.01
6194 12594 1.142778 GATGACGACGCTCTTCCTGC 61.143 60.000 0.00 0.00 0.00 4.85
6195 12595 0.171231 TGATGACGACGCTCTTCCTG 59.829 55.000 0.00 0.00 0.00 3.86
6196 12596 0.453793 CTGATGACGACGCTCTTCCT 59.546 55.000 0.00 0.00 0.00 3.36
6197 12597 0.526524 CCTGATGACGACGCTCTTCC 60.527 60.000 0.00 0.00 0.00 3.46
6198 12598 0.526524 CCCTGATGACGACGCTCTTC 60.527 60.000 0.00 1.08 0.00 2.87
6199 12599 1.513158 CCCTGATGACGACGCTCTT 59.487 57.895 0.00 0.00 0.00 2.85
6200 12600 3.069980 GCCCTGATGACGACGCTCT 62.070 63.158 0.00 0.00 0.00 4.09
6201 12601 2.583593 GCCCTGATGACGACGCTC 60.584 66.667 0.00 0.00 0.00 5.03
6202 12602 4.148825 GGCCCTGATGACGACGCT 62.149 66.667 0.00 0.00 0.00 5.07
6205 12605 4.148825 AGCGGCCCTGATGACGAC 62.149 66.667 0.00 0.00 0.00 4.34
6206 12606 3.838271 GAGCGGCCCTGATGACGA 61.838 66.667 0.00 0.00 0.00 4.20
6207 12607 4.899239 GGAGCGGCCCTGATGACG 62.899 72.222 0.00 0.00 0.00 4.35
6208 12608 2.543067 AAAGGAGCGGCCCTGATGAC 62.543 60.000 10.22 0.00 36.49 3.06
6209 12609 2.300967 AAAGGAGCGGCCCTGATGA 61.301 57.895 10.22 0.00 36.49 2.92
6210 12610 2.117156 CAAAGGAGCGGCCCTGATG 61.117 63.158 10.22 9.07 36.49 3.07
6211 12611 2.273449 CAAAGGAGCGGCCCTGAT 59.727 61.111 10.22 1.68 36.49 2.90
6212 12612 3.249189 ACAAAGGAGCGGCCCTGA 61.249 61.111 10.22 0.00 36.49 3.86
6213 12613 3.058160 CACAAAGGAGCGGCCCTG 61.058 66.667 10.22 3.72 36.49 4.45
6220 12620 2.050077 GGCAACGCACAAAGGAGC 60.050 61.111 0.00 0.00 0.00 4.70
6270 12670 0.395724 TGTCTAGATGCAGAGGCGGA 60.396 55.000 0.00 0.00 45.35 5.54
6272 12672 2.133553 CATTGTCTAGATGCAGAGGCG 58.866 52.381 0.00 0.00 45.35 5.52
6285 12685 1.624336 AGTGGTTGCATGCATTGTCT 58.376 45.000 23.37 14.70 0.00 3.41
6286 12686 2.443887 AAGTGGTTGCATGCATTGTC 57.556 45.000 23.37 12.67 0.00 3.18
6289 12689 9.835389 ATAATTAATAAAGTGGTTGCATGCATT 57.165 25.926 23.37 14.07 0.00 3.56
6358 12759 2.426024 GACAGATGTTGCCTAGACGGTA 59.574 50.000 0.00 0.00 34.25 4.02
6380 12781 5.011533 CCTTCATCAACTGGATAGGAGTAGG 59.988 48.000 0.00 0.00 34.78 3.18
6406 12807 4.716784 ACATTAGGTCCAGACTATCAGCAA 59.283 41.667 0.00 0.00 0.00 3.91
6428 12829 1.230324 GGCTGTGAGGTCTGTTTGAC 58.770 55.000 0.00 0.00 44.63 3.18
6429 12830 0.836606 TGGCTGTGAGGTCTGTTTGA 59.163 50.000 0.00 0.00 0.00 2.69
6442 12843 5.246307 GTCTTAGATGTTAGGTTTGGCTGT 58.754 41.667 0.00 0.00 0.00 4.40
6509 12910 4.803426 GAGGAGTGCGCCGGACTG 62.803 72.222 18.13 0.00 0.00 3.51
6554 12955 6.878923 CAGTACAACACTAAAGATGGATTGGA 59.121 38.462 0.00 0.00 34.98 3.53
6627 13045 2.040544 GGATGGTGGCGTTGTCTGG 61.041 63.158 0.00 0.00 0.00 3.86
6708 13126 1.942677 TTTGACATGTCGACAACGGT 58.057 45.000 24.13 20.12 40.21 4.83
6720 13138 0.392461 AGCGGCGTGGTATTTGACAT 60.392 50.000 9.37 0.00 0.00 3.06
6726 13144 2.499685 GAGGAGCGGCGTGGTATT 59.500 61.111 9.37 0.00 0.00 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.