Multiple sequence alignment - TraesCS1D01G219000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G219000 chr1D 100.000 4094 0 0 1 4094 306633613 306637706 0.000000e+00 7561.0
1 TraesCS1D01G219000 chr1D 84.116 277 22 16 1931 2187 486869633 486869359 8.790000e-62 248.0
2 TraesCS1D01G219000 chr1D 94.175 103 6 0 1929 2031 486865411 486865309 1.520000e-34 158.0
3 TraesCS1D01G219000 chr1D 92.683 41 1 2 2249 2288 436855698 436855659 1.590000e-04 58.4
4 TraesCS1D01G219000 chr1A 91.860 1511 95 14 143 1645 385273808 385275298 0.000000e+00 2084.0
5 TraesCS1D01G219000 chr1A 89.164 646 32 14 2864 3503 385276887 385277500 0.000000e+00 771.0
6 TraesCS1D01G219000 chr1A 89.984 609 24 12 1648 2239 385275338 385275926 0.000000e+00 752.0
7 TraesCS1D01G219000 chr1A 95.887 462 16 2 2379 2837 385275930 385276391 0.000000e+00 745.0
8 TraesCS1D01G219000 chr1A 92.771 332 9 4 2498 2829 385276416 385276732 2.230000e-127 466.0
9 TraesCS1D01G219000 chr1A 92.683 41 1 2 2249 2288 566410591 566410630 1.590000e-04 58.4
10 TraesCS1D01G219000 chr1A 92.683 41 1 2 2249 2288 566413376 566413415 1.590000e-04 58.4
11 TraesCS1D01G219000 chr1A 92.683 41 1 2 2249 2288 566416231 566416270 1.590000e-04 58.4
12 TraesCS1D01G219000 chr1B 93.417 957 47 11 713 1658 413983136 413984087 0.000000e+00 1404.0
13 TraesCS1D01G219000 chr1B 91.047 659 29 13 1658 2288 413984118 413984774 0.000000e+00 863.0
14 TraesCS1D01G219000 chr1B 92.727 550 25 7 2296 2831 413984818 413985366 0.000000e+00 780.0
15 TraesCS1D01G219000 chr1B 87.080 565 69 3 178 738 413982509 413983073 1.610000e-178 636.0
16 TraesCS1D01G219000 chr1B 93.917 411 18 5 2865 3270 413985489 413985897 7.520000e-172 614.0
17 TraesCS1D01G219000 chr1B 78.009 914 118 55 1929 2813 677998302 677997443 7.900000e-137 497.0
18 TraesCS1D01G219000 chr1B 86.667 255 18 11 1929 2182 656853648 656853409 6.750000e-68 268.0
19 TraesCS1D01G219000 chr1B 85.652 230 22 9 2623 2846 677994357 677994133 8.850000e-57 231.0
20 TraesCS1D01G219000 chr1B 83.682 239 19 11 3555 3778 413986874 413987107 1.490000e-49 207.0
21 TraesCS1D01G219000 chr6A 85.606 528 56 17 2294 2812 155795618 155795102 1.670000e-148 536.0
22 TraesCS1D01G219000 chr6D 84.381 525 59 19 2295 2812 125021308 125021816 1.020000e-135 494.0
23 TraesCS1D01G219000 chr6D 86.441 236 17 11 2582 2812 95860212 95860437 1.140000e-60 244.0
24 TraesCS1D01G219000 chr6D 86.885 61 5 3 2230 2288 315747377 315747436 9.500000e-07 65.8
25 TraesCS1D01G219000 chr6B 83.681 527 61 20 2295 2813 223258223 223258732 1.330000e-129 473.0
26 TraesCS1D01G219000 chr6B 86.458 96 8 4 46 141 314591454 314591544 2.600000e-17 100.0
27 TraesCS1D01G219000 chr4A 87.925 265 18 13 1929 2181 61888180 61887918 2.390000e-77 300.0
28 TraesCS1D01G219000 chr4A 92.593 81 4 2 61 141 609073920 609073842 9.300000e-22 115.0
29 TraesCS1D01G219000 chr4A 89.412 85 5 3 3516 3598 49257403 49257321 2.010000e-18 104.0
30 TraesCS1D01G219000 chr2B 83.706 313 38 11 2440 2741 477403350 477403040 2.410000e-72 283.0
31 TraesCS1D01G219000 chr2B 86.111 72 9 1 3527 3598 445257206 445257136 4.390000e-10 76.8
32 TraesCS1D01G219000 chr4D 85.409 281 25 10 2533 2811 404220828 404220562 1.120000e-70 278.0
33 TraesCS1D01G219000 chr4D 84.906 265 26 12 1929 2181 404221332 404221070 5.250000e-64 255.0
34 TraesCS1D01G219000 chr4D 88.235 85 3 4 3516 3598 414153650 414153729 1.210000e-15 95.3
35 TraesCS1D01G219000 chr3B 85.714 273 25 12 1915 2181 111553859 111554123 4.030000e-70 276.0
36 TraesCS1D01G219000 chr3B 85.659 258 23 12 1929 2181 119964605 119964853 4.060000e-65 259.0
37 TraesCS1D01G219000 chr3B 92.500 80 4 2 62 141 693084106 693084029 3.340000e-21 113.0
38 TraesCS1D01G219000 chr3B 92.500 80 2 4 63 141 15111120 15111044 1.200000e-20 111.0
39 TraesCS1D01G219000 chr3A 86.770 257 22 11 1929 2179 77892488 77892738 4.030000e-70 276.0
40 TraesCS1D01G219000 chr2D 80.220 364 34 26 2239 2600 403328822 403328495 5.290000e-59 239.0
41 TraesCS1D01G219000 chr2A 92.547 161 11 1 2440 2600 540772491 540772332 3.180000e-56 230.0
42 TraesCS1D01G219000 chr2A 86.503 163 19 3 2440 2600 540691832 540691671 4.210000e-40 176.0
43 TraesCS1D01G219000 chr2A 93.671 79 4 1 63 141 712843635 712843558 2.590000e-22 117.0
44 TraesCS1D01G219000 chr4B 92.523 107 6 2 2076 2181 614260078 614259973 7.090000e-33 152.0
45 TraesCS1D01G219000 chr7A 91.860 86 3 3 60 141 274661123 274661038 2.590000e-22 117.0
46 TraesCS1D01G219000 chr3D 92.500 80 3 3 64 141 12881645 12881723 1.200000e-20 111.0
47 TraesCS1D01G219000 chrUn 91.358 81 6 1 62 141 226012791 226012871 4.330000e-20 110.0
48 TraesCS1D01G219000 chr7D 91.358 81 5 2 62 141 602639126 602639047 4.330000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G219000 chr1D 306633613 306637706 4093 False 7561.000000 7561 100.000000 1 4094 1 chr1D.!!$F1 4093
1 TraesCS1D01G219000 chr1D 486865309 486869633 4324 True 203.000000 248 89.145500 1929 2187 2 chr1D.!!$R2 258
2 TraesCS1D01G219000 chr1A 385273808 385277500 3692 False 963.600000 2084 91.933200 143 3503 5 chr1A.!!$F1 3360
3 TraesCS1D01G219000 chr1B 413982509 413987107 4598 False 750.666667 1404 90.311667 178 3778 6 chr1B.!!$F1 3600
4 TraesCS1D01G219000 chr1B 677994133 677998302 4169 True 364.000000 497 81.830500 1929 2846 2 chr1B.!!$R2 917
5 TraesCS1D01G219000 chr6A 155795102 155795618 516 True 536.000000 536 85.606000 2294 2812 1 chr6A.!!$R1 518
6 TraesCS1D01G219000 chr6D 125021308 125021816 508 False 494.000000 494 84.381000 2295 2812 1 chr6D.!!$F2 517
7 TraesCS1D01G219000 chr6B 223258223 223258732 509 False 473.000000 473 83.681000 2295 2813 1 chr6B.!!$F1 518
8 TraesCS1D01G219000 chr4D 404220562 404221332 770 True 266.500000 278 85.157500 1929 2811 2 chr4D.!!$R1 882

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
294 298 0.096976 CAAATGTCCCTAGCAACGCG 59.903 55.0 3.53 3.53 0.00 6.01 F
1004 1108 0.171903 CTTAGCACAGCACCAATGGC 59.828 55.0 0.00 0.00 0.00 4.40 F
1135 1239 0.173481 GTGCTGACATCTCCGTGCTA 59.827 55.0 0.00 0.00 0.00 3.49 F
2289 2515 0.673644 AAGTGCCGTATGACACTGCC 60.674 55.0 4.52 0.00 46.17 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1166 1270 1.219124 GAAGCGGCTGATGACCTCA 59.781 57.895 1.81 0.00 0.00 3.86 R
2862 6475 0.181114 AGCAGGTTCAAGTGCACTGA 59.819 50.000 22.49 16.73 42.47 3.41 R
2928 7752 4.708421 AGAATGCAACCAGATAGCACAATT 59.292 37.500 0.00 0.00 41.60 2.32 R
3986 11028 0.033208 GAGGGCCATGGATTTGGTGA 60.033 55.000 18.40 0.00 39.11 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 9.113838 AGTTCCATATGTTTGCTAGACATTAAG 57.886 33.333 1.24 0.00 38.58 1.85
49 50 9.109393 GTTCCATATGTTTGCTAGACATTAAGA 57.891 33.333 1.24 0.00 38.58 2.10
50 51 9.679661 TTCCATATGTTTGCTAGACATTAAGAA 57.320 29.630 1.24 0.00 38.58 2.52
51 52 9.679661 TCCATATGTTTGCTAGACATTAAGAAA 57.320 29.630 1.24 0.00 38.58 2.52
57 58 9.332502 TGTTTGCTAGACATTAAGAAAACTACA 57.667 29.630 7.30 0.00 40.51 2.74
60 61 9.772973 TTGCTAGACATTAAGAAAACTACAAGA 57.227 29.630 0.00 0.00 0.00 3.02
61 62 9.944376 TGCTAGACATTAAGAAAACTACAAGAT 57.056 29.630 0.00 0.00 0.00 2.40
84 85 9.678260 AGATTTATTATTGCATGATACTCCCTC 57.322 33.333 0.00 0.00 0.00 4.30
85 86 8.814038 ATTTATTATTGCATGATACTCCCTCC 57.186 34.615 0.00 0.00 0.00 4.30
86 87 2.847327 ATTGCATGATACTCCCTCCG 57.153 50.000 0.00 0.00 0.00 4.63
87 88 1.496060 TTGCATGATACTCCCTCCGT 58.504 50.000 0.00 0.00 0.00 4.69
88 89 2.375014 TGCATGATACTCCCTCCGTA 57.625 50.000 0.00 0.00 0.00 4.02
89 90 2.673258 TGCATGATACTCCCTCCGTAA 58.327 47.619 0.00 0.00 0.00 3.18
90 91 3.035363 TGCATGATACTCCCTCCGTAAA 58.965 45.455 0.00 0.00 0.00 2.01
91 92 3.181469 TGCATGATACTCCCTCCGTAAAC 60.181 47.826 0.00 0.00 0.00 2.01
92 93 3.069729 GCATGATACTCCCTCCGTAAACT 59.930 47.826 0.00 0.00 0.00 2.66
93 94 4.280174 GCATGATACTCCCTCCGTAAACTA 59.720 45.833 0.00 0.00 0.00 2.24
94 95 5.221382 GCATGATACTCCCTCCGTAAACTAA 60.221 44.000 0.00 0.00 0.00 2.24
95 96 6.518537 GCATGATACTCCCTCCGTAAACTAAT 60.519 42.308 0.00 0.00 0.00 1.73
96 97 7.309621 GCATGATACTCCCTCCGTAAACTAATA 60.310 40.741 0.00 0.00 0.00 0.98
97 98 8.750298 CATGATACTCCCTCCGTAAACTAATAT 58.250 37.037 0.00 0.00 0.00 1.28
98 99 9.986157 ATGATACTCCCTCCGTAAACTAATATA 57.014 33.333 0.00 0.00 0.00 0.86
99 100 9.812347 TGATACTCCCTCCGTAAACTAATATAA 57.188 33.333 0.00 0.00 0.00 0.98
102 103 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
103 104 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
104 105 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
105 106 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
106 107 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
107 108 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
108 109 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
109 110 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
110 111 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
229 232 3.628942 TCATGTTTCATGCTACCATGCTC 59.371 43.478 5.03 0.00 46.69 4.26
236 239 3.943381 TCATGCTACCATGCTCAGAAAAG 59.057 43.478 0.00 0.00 46.69 2.27
243 246 6.264067 GCTACCATGCTCAGAAAAGGAATAAT 59.736 38.462 0.00 0.00 0.00 1.28
285 288 5.725551 TGTTATCCCATACAAATGTCCCT 57.274 39.130 0.00 0.00 0.00 4.20
294 298 0.096976 CAAATGTCCCTAGCAACGCG 59.903 55.000 3.53 3.53 0.00 6.01
438 443 8.641498 ATGGAATCATACATTTGTTATCCTCC 57.359 34.615 0.00 0.00 0.00 4.30
538 543 8.839310 ATTTATCTGACAACTATGTATGCTCC 57.161 34.615 0.00 0.00 40.74 4.70
552 557 2.209690 TGCTCCGATATATCACCCGA 57.790 50.000 13.11 1.94 0.00 5.14
559 564 6.239064 GCTCCGATATATCACCCGATATCTTT 60.239 42.308 13.11 0.00 42.66 2.52
560 565 7.040617 GCTCCGATATATCACCCGATATCTTTA 60.041 40.741 13.11 0.00 42.66 1.85
563 568 9.982651 CCGATATATCACCCGATATCTTTAAAT 57.017 33.333 13.11 0.00 42.66 1.40
630 635 6.753107 AATAACTAATCAAAGTTGACCGGG 57.247 37.500 6.32 0.00 39.95 5.73
639 644 4.703093 TCAAAGTTGACCGGGGAATAATTC 59.297 41.667 6.32 0.00 31.01 2.17
707 714 6.183361 TGTTTCAGGGGATAGCCGAAATTATA 60.183 38.462 2.54 0.00 33.83 0.98
768 837 7.228906 GGGTAGTATTTCTTTCATTTAGGGCTC 59.771 40.741 0.00 0.00 0.00 4.70
769 838 7.993758 GGTAGTATTTCTTTCATTTAGGGCTCT 59.006 37.037 0.00 0.00 0.00 4.09
894 992 4.702081 AGAGACACGTGCGCGGTC 62.702 66.667 25.20 24.77 43.45 4.79
997 1101 1.800805 TCTCAAGCTTAGCACAGCAC 58.199 50.000 7.07 0.00 42.84 4.40
1004 1108 0.171903 CTTAGCACAGCACCAATGGC 59.828 55.000 0.00 0.00 0.00 4.40
1005 1109 1.585267 TTAGCACAGCACCAATGGCG 61.585 55.000 0.00 0.00 36.08 5.69
1006 1110 2.746412 TAGCACAGCACCAATGGCGT 62.746 55.000 0.00 0.00 36.08 5.68
1038 1142 4.141228 ACCTTCATCATGATCAAGCCTGAT 60.141 41.667 13.47 1.11 45.34 2.90
1070 1174 2.105128 CCTCGTAAGCGCCTCCTG 59.895 66.667 2.29 0.00 38.14 3.86
1135 1239 0.173481 GTGCTGACATCTCCGTGCTA 59.827 55.000 0.00 0.00 0.00 3.49
1154 1258 5.230097 GTGCTACTGTTTTTGTTTCTGCTTC 59.770 40.000 0.00 0.00 0.00 3.86
1166 1270 3.616956 TTCTGCTTCAATCAGATCGGT 57.383 42.857 0.00 0.00 39.96 4.69
1399 1503 2.125961 GTACATCGTCTCCGGCCCT 61.126 63.158 0.00 0.00 33.95 5.19
1453 1557 1.476891 GTCTCCACTGGACGCAAGATA 59.523 52.381 0.00 0.00 43.62 1.98
1527 1631 2.126071 CGTCGACATCGGCAGGTT 60.126 61.111 17.16 0.00 45.47 3.50
1574 1680 9.817365 CAGTGAAAGTAGTTATTGAGTTGAATG 57.183 33.333 0.00 0.00 0.00 2.67
1654 1761 5.043903 CCTCGATACTTGAATGTGTAGTGG 58.956 45.833 0.00 0.00 0.00 4.00
1767 1925 2.612672 GCCAACTAAGCCTAAATCGTCC 59.387 50.000 0.00 0.00 0.00 4.79
1823 1990 8.417176 CAGTTCATAAAATCTTGTTTGCGTTAC 58.583 33.333 0.00 0.00 0.00 2.50
1853 2022 6.535150 TGATTTATTCAGACTCTAGGCGTTTG 59.465 38.462 0.00 0.00 0.00 2.93
1860 2029 5.127194 TCAGACTCTAGGCGTTTGATTGTAT 59.873 40.000 0.00 0.00 0.00 2.29
2035 2211 1.414919 ACACACTGAAGCCTTTCCGTA 59.585 47.619 0.00 0.00 30.76 4.02
2215 2430 5.308237 GGTCCTCCCAGTTACATATTCTGAT 59.692 44.000 0.00 0.00 0.00 2.90
2237 2463 8.729805 TGATATGGTTTTTGCTTTTGTTTCTT 57.270 26.923 0.00 0.00 0.00 2.52
2288 2514 0.721718 GAAGTGCCGTATGACACTGC 59.278 55.000 4.52 0.00 46.17 4.40
2289 2515 0.673644 AAGTGCCGTATGACACTGCC 60.674 55.000 4.52 0.00 46.17 4.85
2290 2516 2.125713 TGCCGTATGACACTGCCG 60.126 61.111 0.00 0.00 36.61 5.69
2291 2517 2.125673 GCCGTATGACACTGCCGT 60.126 61.111 0.00 0.00 31.64 5.68
2292 2518 2.452813 GCCGTATGACACTGCCGTG 61.453 63.158 6.73 6.73 46.63 4.94
2327 2589 1.216678 TGTGGTTTTGTCTGGGATGGT 59.783 47.619 0.00 0.00 0.00 3.55
2377 2639 4.286910 GCTGTGTGCTTGATTTTAAACGA 58.713 39.130 0.00 0.00 38.95 3.85
2405 2681 6.882610 TTCTGCAATGCTTTCTTCTCTTTA 57.117 33.333 6.82 0.00 0.00 1.85
2408 2684 5.872635 TGCAATGCTTTCTTCTCTTTATCG 58.127 37.500 6.82 0.00 0.00 2.92
2478 2754 1.202417 CCACGTCTCCATTAGCGACAT 60.202 52.381 0.00 0.00 0.00 3.06
2507 2783 1.281577 TGGAGATGCTACATTGTGCCA 59.718 47.619 0.00 0.00 0.00 4.92
2614 2892 4.510711 CACTTCTTGACTGCATAGCCATAG 59.489 45.833 0.00 0.00 0.00 2.23
2842 6455 8.181573 TCAGAAAAATAATACAATGTTCGAGGC 58.818 33.333 0.00 0.00 0.00 4.70
2844 6457 6.767524 AAAATAATACAATGTTCGAGGCCA 57.232 33.333 5.01 0.00 0.00 5.36
2846 6459 6.560253 AATAATACAATGTTCGAGGCCATC 57.440 37.500 5.01 0.00 0.00 3.51
2856 6469 2.234143 TCGAGGCCATCTACAGATCAG 58.766 52.381 5.01 0.00 31.21 2.90
2857 6470 1.336702 CGAGGCCATCTACAGATCAGC 60.337 57.143 5.01 3.24 31.21 4.26
2858 6471 0.678395 AGGCCATCTACAGATCAGCG 59.322 55.000 5.01 0.00 33.76 5.18
2861 6474 1.495878 CCATCTACAGATCAGCGCAC 58.504 55.000 11.47 0.00 31.21 5.34
2862 6475 1.068281 CCATCTACAGATCAGCGCACT 59.932 52.381 11.47 0.00 31.21 4.40
2884 7703 1.152902 TGCACTTGAACCTGCTGCT 60.153 52.632 0.00 0.00 34.29 4.24
2898 7722 3.382546 CCTGCTGCTTATGCCTGTTTAAT 59.617 43.478 0.00 0.00 38.71 1.40
2915 7739 7.341256 CCTGTTTAATACACTAGTGTCTCCCTA 59.659 40.741 31.11 13.86 43.74 3.53
2916 7740 8.834004 TGTTTAATACACTAGTGTCTCCCTAT 57.166 34.615 31.11 15.55 43.74 2.57
2923 7747 6.615617 ACACTAGTGTCTCCCTATGTATCAT 58.384 40.000 22.95 0.00 40.24 2.45
3224 8049 4.326826 TGAAGTTATCTCCTTGTGCTTGG 58.673 43.478 0.00 0.00 0.00 3.61
3316 8176 5.466058 TGCTTTTGTTGTGCTTTGATTATGG 59.534 36.000 0.00 0.00 0.00 2.74
3338 8980 5.022335 GCTTTGCCATACTTTTCTTTTGC 57.978 39.130 0.00 0.00 0.00 3.68
3339 8981 4.083855 GCTTTGCCATACTTTTCTTTTGCC 60.084 41.667 0.00 0.00 0.00 4.52
3355 8997 2.309528 TGCCGGTTAGTAGCAGAATG 57.690 50.000 1.90 0.00 40.87 2.67
3384 9026 5.708697 ACTCATGATCTTCACAGCAAATTGA 59.291 36.000 0.00 0.00 0.00 2.57
3426 9463 7.922837 TGATGCACACTCAATGTTATAGAATG 58.077 34.615 0.00 0.00 40.64 2.67
3427 9464 7.553760 TGATGCACACTCAATGTTATAGAATGT 59.446 33.333 0.00 0.00 40.64 2.71
3428 9465 7.075674 TGCACACTCAATGTTATAGAATGTG 57.924 36.000 0.00 0.00 40.64 3.21
3429 9466 6.878389 TGCACACTCAATGTTATAGAATGTGA 59.122 34.615 7.33 0.00 40.64 3.58
3431 9468 9.045223 GCACACTCAATGTTATAGAATGTGATA 57.955 33.333 7.33 0.00 40.64 2.15
3484 9522 9.075519 CATTGGTATTGTAGCTGTATGTTTTTG 57.924 33.333 0.00 0.00 0.00 2.44
3511 9549 8.137437 CCAAAATAAGGCAATATGTAACTCTGG 58.863 37.037 0.00 0.00 0.00 3.86
3512 9550 8.686334 CAAAATAAGGCAATATGTAACTCTGGT 58.314 33.333 0.00 0.00 0.00 4.00
3513 9551 8.451908 AAATAAGGCAATATGTAACTCTGGTC 57.548 34.615 0.00 0.00 0.00 4.02
3514 9552 5.435686 AAGGCAATATGTAACTCTGGTCA 57.564 39.130 0.00 0.00 0.00 4.02
3516 9554 6.006275 AGGCAATATGTAACTCTGGTCATT 57.994 37.500 0.00 0.00 0.00 2.57
3518 9556 6.891908 AGGCAATATGTAACTCTGGTCATTTT 59.108 34.615 0.00 0.00 0.00 1.82
3519 9557 7.397192 AGGCAATATGTAACTCTGGTCATTTTT 59.603 33.333 0.00 0.00 0.00 1.94
3520 9558 8.682710 GGCAATATGTAACTCTGGTCATTTTTA 58.317 33.333 0.00 0.00 0.00 1.52
3521 9559 9.503427 GCAATATGTAACTCTGGTCATTTTTAC 57.497 33.333 0.00 0.00 0.00 2.01
3533 9688 5.189934 TGGTCATTTTTACCACCAAAAACCT 59.810 36.000 0.00 0.00 42.10 3.50
3535 9690 6.259167 GGTCATTTTTACCACCAAAAACCTTC 59.741 38.462 0.00 0.00 39.49 3.46
3536 9691 6.259167 GTCATTTTTACCACCAAAAACCTTCC 59.741 38.462 0.00 0.00 39.49 3.46
3537 9692 5.757099 TTTTTACCACCAAAAACCTTCCA 57.243 34.783 0.00 0.00 33.57 3.53
3538 9693 5.757099 TTTTACCACCAAAAACCTTCCAA 57.243 34.783 0.00 0.00 0.00 3.53
3541 9696 3.178046 ACCACCAAAAACCTTCCAACTT 58.822 40.909 0.00 0.00 0.00 2.66
3542 9697 3.585289 ACCACCAAAAACCTTCCAACTTT 59.415 39.130 0.00 0.00 0.00 2.66
3543 9698 4.778427 ACCACCAAAAACCTTCCAACTTTA 59.222 37.500 0.00 0.00 0.00 1.85
3544 9699 5.248705 ACCACCAAAAACCTTCCAACTTTAA 59.751 36.000 0.00 0.00 0.00 1.52
3547 9702 7.655732 CCACCAAAAACCTTCCAACTTTAATAG 59.344 37.037 0.00 0.00 0.00 1.73
3548 9703 8.417884 CACCAAAAACCTTCCAACTTTAATAGA 58.582 33.333 0.00 0.00 0.00 1.98
3549 9704 9.154632 ACCAAAAACCTTCCAACTTTAATAGAT 57.845 29.630 0.00 0.00 0.00 1.98
3553 9708 7.939784 AACCTTCCAACTTTAATAGATGACC 57.060 36.000 0.00 0.00 0.00 4.02
3586 10613 5.974751 GTGTTTCAAAATACATCACGGTTGT 59.025 36.000 0.00 0.00 31.31 3.32
3591 10618 5.995282 TCAAAATACATCACGGTTGTCTTCT 59.005 36.000 0.00 0.00 0.00 2.85
3593 10620 5.862924 AATACATCACGGTTGTCTTCTTG 57.137 39.130 0.00 0.00 0.00 3.02
3598 10625 0.834612 ACGGTTGTCTTCTTGTGGGA 59.165 50.000 0.00 0.00 0.00 4.37
3599 10626 1.420138 ACGGTTGTCTTCTTGTGGGAT 59.580 47.619 0.00 0.00 0.00 3.85
3602 10629 3.317993 CGGTTGTCTTCTTGTGGGATTTT 59.682 43.478 0.00 0.00 0.00 1.82
3603 10630 4.517453 CGGTTGTCTTCTTGTGGGATTTTA 59.483 41.667 0.00 0.00 0.00 1.52
3606 10633 7.090808 GGTTGTCTTCTTGTGGGATTTTAATC 58.909 38.462 0.00 0.00 34.66 1.75
3608 10635 7.452880 TGTCTTCTTGTGGGATTTTAATCTG 57.547 36.000 2.77 0.00 35.73 2.90
3653 10694 3.050089 TGGAGGTGTGGGAGAAAAACTA 58.950 45.455 0.00 0.00 0.00 2.24
3655 10696 4.079672 TGGAGGTGTGGGAGAAAAACTAAA 60.080 41.667 0.00 0.00 0.00 1.85
3657 10698 5.538813 GGAGGTGTGGGAGAAAAACTAAATT 59.461 40.000 0.00 0.00 0.00 1.82
3723 10764 7.845617 TGTGAAAATTTACGTGCATAAGAAC 57.154 32.000 0.00 0.00 0.00 3.01
3727 10768 9.302345 TGAAAATTTACGTGCATAAGAACAAAA 57.698 25.926 0.00 0.00 0.00 2.44
3782 10824 9.787532 TCTTTTTGAAAGTACTGTTCATTTGAG 57.212 29.630 16.20 12.88 35.03 3.02
3784 10826 6.942532 TTGAAAGTACTGTTCATTTGAGCT 57.057 33.333 16.20 0.00 35.03 4.09
3785 10827 6.545504 TGAAAGTACTGTTCATTTGAGCTC 57.454 37.500 6.82 6.82 30.08 4.09
3786 10828 6.054941 TGAAAGTACTGTTCATTTGAGCTCA 58.945 36.000 13.74 13.74 30.08 4.26
3787 10829 5.931441 AAGTACTGTTCATTTGAGCTCAC 57.069 39.130 18.03 4.16 0.00 3.51
3788 10830 3.990469 AGTACTGTTCATTTGAGCTCACG 59.010 43.478 18.03 8.32 0.00 4.35
3790 10832 2.545526 ACTGTTCATTTGAGCTCACGTG 59.454 45.455 18.03 17.66 0.00 4.49
3791 10833 2.802247 CTGTTCATTTGAGCTCACGTGA 59.198 45.455 18.03 19.68 0.00 4.35
3793 10835 3.002246 TGTTCATTTGAGCTCACGTGAAC 59.998 43.478 37.22 37.22 43.45 3.18
3796 10838 1.487482 TTTGAGCTCACGTGAACTCG 58.513 50.000 32.48 18.38 39.46 4.18
3797 10839 0.666374 TTGAGCTCACGTGAACTCGA 59.334 50.000 32.48 30.09 39.46 4.04
3799 10841 3.453465 GCTCACGTGAACTCGAGC 58.547 61.111 20.49 14.27 43.60 5.03
3801 10843 1.068287 GCTCACGTGAACTCGAGCTC 61.068 60.000 20.49 11.06 45.86 4.09
3802 10844 0.238553 CTCACGTGAACTCGAGCTCA 59.761 55.000 20.49 14.39 34.70 4.26
3805 10847 2.486592 TCACGTGAACTCGAGCTCATAA 59.513 45.455 20.62 5.30 34.70 1.90
3806 10848 3.128764 TCACGTGAACTCGAGCTCATAAT 59.871 43.478 20.62 7.56 34.70 1.28
3807 10849 4.334481 TCACGTGAACTCGAGCTCATAATA 59.666 41.667 20.62 5.92 34.70 0.98
3808 10850 4.438145 CACGTGAACTCGAGCTCATAATAC 59.562 45.833 20.62 7.44 34.70 1.89
3809 10851 4.335874 ACGTGAACTCGAGCTCATAATACT 59.664 41.667 20.62 0.00 34.70 2.12
3810 10852 5.163642 ACGTGAACTCGAGCTCATAATACTT 60.164 40.000 20.62 0.00 34.70 2.24
3811 10853 5.744345 CGTGAACTCGAGCTCATAATACTTT 59.256 40.000 20.62 0.00 0.00 2.66
3813 10855 7.394872 GTGAACTCGAGCTCATAATACTTTTG 58.605 38.462 20.62 0.00 0.00 2.44
3814 10856 5.975410 ACTCGAGCTCATAATACTTTTGC 57.025 39.130 13.61 0.00 0.00 3.68
3815 10857 5.665459 ACTCGAGCTCATAATACTTTTGCT 58.335 37.500 13.61 0.00 0.00 3.91
3816 10858 6.806751 ACTCGAGCTCATAATACTTTTGCTA 58.193 36.000 13.61 0.00 0.00 3.49
3817 10859 7.437748 ACTCGAGCTCATAATACTTTTGCTAT 58.562 34.615 13.61 0.00 0.00 2.97
3818 10860 7.383572 ACTCGAGCTCATAATACTTTTGCTATG 59.616 37.037 13.61 0.00 0.00 2.23
3819 10861 6.146184 TCGAGCTCATAATACTTTTGCTATGC 59.854 38.462 15.40 0.00 0.00 3.14
3821 10863 7.329471 CGAGCTCATAATACTTTTGCTATGCTA 59.671 37.037 15.40 0.00 0.00 3.49
3822 10864 9.160496 GAGCTCATAATACTTTTGCTATGCTAT 57.840 33.333 9.40 0.00 0.00 2.97
3823 10865 9.512588 AGCTCATAATACTTTTGCTATGCTATT 57.487 29.630 0.00 0.00 0.00 1.73
3824 10866 9.552114 GCTCATAATACTTTTGCTATGCTATTG 57.448 33.333 0.00 0.00 0.00 1.90
3826 10868 9.791801 TCATAATACTTTTGCTATGCTATTGGA 57.208 29.630 0.00 0.00 0.00 3.53
3829 10871 7.880160 ATACTTTTGCTATGCTATTGGAACA 57.120 32.000 0.00 0.00 0.00 3.18
3842 10884 2.093306 TGGAACAATGTACAGCCGAG 57.907 50.000 0.33 0.00 31.92 4.63
3843 10885 0.727398 GGAACAATGTACAGCCGAGC 59.273 55.000 0.33 0.00 0.00 5.03
3844 10886 1.676014 GGAACAATGTACAGCCGAGCT 60.676 52.381 0.33 0.00 40.77 4.09
3845 10887 2.076863 GAACAATGTACAGCCGAGCTT 58.923 47.619 0.33 0.00 36.40 3.74
3846 10888 1.726853 ACAATGTACAGCCGAGCTTC 58.273 50.000 0.33 0.00 36.40 3.86
3847 10889 1.276421 ACAATGTACAGCCGAGCTTCT 59.724 47.619 0.33 0.00 36.40 2.85
3848 10890 1.929836 CAATGTACAGCCGAGCTTCTC 59.070 52.381 0.33 0.00 36.40 2.87
3849 10891 1.186200 ATGTACAGCCGAGCTTCTCA 58.814 50.000 0.33 0.00 36.40 3.27
3850 10892 0.966179 TGTACAGCCGAGCTTCTCAA 59.034 50.000 0.00 0.00 36.40 3.02
3851 10893 1.343142 TGTACAGCCGAGCTTCTCAAA 59.657 47.619 0.00 0.00 36.40 2.69
3852 10894 2.028112 TGTACAGCCGAGCTTCTCAAAT 60.028 45.455 0.00 0.00 36.40 2.32
3853 10895 1.446907 ACAGCCGAGCTTCTCAAATG 58.553 50.000 0.00 0.00 36.40 2.32
3854 10896 0.098376 CAGCCGAGCTTCTCAAATGC 59.902 55.000 0.00 0.00 36.40 3.56
3855 10897 1.028868 AGCCGAGCTTCTCAAATGCC 61.029 55.000 0.00 0.00 33.89 4.40
3856 10898 1.997928 GCCGAGCTTCTCAAATGCCC 61.998 60.000 0.00 0.00 0.00 5.36
3857 10899 1.379642 CCGAGCTTCTCAAATGCCCC 61.380 60.000 0.00 0.00 0.00 5.80
3858 10900 0.393537 CGAGCTTCTCAAATGCCCCT 60.394 55.000 0.00 0.00 0.00 4.79
3859 10901 1.844687 GAGCTTCTCAAATGCCCCTT 58.155 50.000 0.00 0.00 0.00 3.95
3860 10902 2.680805 CGAGCTTCTCAAATGCCCCTTA 60.681 50.000 0.00 0.00 0.00 2.69
3861 10903 2.948315 GAGCTTCTCAAATGCCCCTTAG 59.052 50.000 0.00 0.00 0.00 2.18
3862 10904 2.027385 GCTTCTCAAATGCCCCTTAGG 58.973 52.381 0.00 0.00 39.47 2.69
3863 10905 2.357154 GCTTCTCAAATGCCCCTTAGGA 60.357 50.000 0.00 0.00 38.24 2.94
3864 10906 3.689569 GCTTCTCAAATGCCCCTTAGGAT 60.690 47.826 0.00 0.00 38.24 3.24
3865 10907 3.582998 TCTCAAATGCCCCTTAGGATG 57.417 47.619 0.00 0.00 38.24 3.51
3866 10908 2.175499 TCTCAAATGCCCCTTAGGATGG 59.825 50.000 0.00 0.00 38.24 3.51
3867 10909 1.217689 TCAAATGCCCCTTAGGATGGG 59.782 52.381 0.00 0.00 45.22 4.00
3876 10918 3.601443 CCTTAGGATGGGATCGATGAC 57.399 52.381 0.54 0.00 0.00 3.06
3877 10919 2.234908 CCTTAGGATGGGATCGATGACC 59.765 54.545 0.54 5.63 0.00 4.02
3878 10920 1.938585 TAGGATGGGATCGATGACCC 58.061 55.000 14.04 14.04 45.74 4.46
3883 10925 2.516448 GGGATCGATGACCCAGTCA 58.484 57.895 15.65 0.00 46.90 3.41
3884 10926 0.390860 GGGATCGATGACCCAGTCAG 59.609 60.000 15.65 0.00 46.04 3.51
3885 10927 1.115467 GGATCGATGACCCAGTCAGT 58.885 55.000 0.54 0.00 46.04 3.41
3886 10928 1.202463 GGATCGATGACCCAGTCAGTG 60.202 57.143 0.54 0.00 46.04 3.66
3887 10929 1.751351 GATCGATGACCCAGTCAGTGA 59.249 52.381 0.54 4.23 46.04 3.41
3888 10930 0.888619 TCGATGACCCAGTCAGTGAC 59.111 55.000 15.78 15.78 46.04 3.67
3889 10931 0.891373 CGATGACCCAGTCAGTGACT 59.109 55.000 20.34 20.34 46.04 3.41
3890 10932 2.092323 CGATGACCCAGTCAGTGACTA 58.908 52.381 25.04 10.24 46.04 2.59
3891 10933 2.492088 CGATGACCCAGTCAGTGACTAA 59.508 50.000 25.04 9.41 46.04 2.24
3892 10934 3.673594 CGATGACCCAGTCAGTGACTAAC 60.674 52.174 25.04 15.80 46.04 2.34
3893 10935 1.611977 TGACCCAGTCAGTGACTAACG 59.388 52.381 25.04 16.60 41.37 3.18
3894 10936 0.317479 ACCCAGTCAGTGACTAACGC 59.683 55.000 25.04 0.00 41.37 4.84
3895 10937 0.389948 CCCAGTCAGTGACTAACGCC 60.390 60.000 25.04 0.00 41.37 5.68
3896 10938 0.389948 CCAGTCAGTGACTAACGCCC 60.390 60.000 25.04 0.00 41.37 6.13
3897 10939 0.603569 CAGTCAGTGACTAACGCCCT 59.396 55.000 25.04 0.00 41.37 5.19
3898 10940 1.000955 CAGTCAGTGACTAACGCCCTT 59.999 52.381 25.04 0.00 41.37 3.95
3899 10941 1.272769 AGTCAGTGACTAACGCCCTTC 59.727 52.381 24.36 0.00 41.51 3.46
3900 10942 1.000506 GTCAGTGACTAACGCCCTTCA 59.999 52.381 16.26 0.00 0.00 3.02
3901 10943 1.899814 TCAGTGACTAACGCCCTTCAT 59.100 47.619 0.00 0.00 0.00 2.57
3902 10944 3.093814 TCAGTGACTAACGCCCTTCATA 58.906 45.455 0.00 0.00 0.00 2.15
3903 10945 3.704566 TCAGTGACTAACGCCCTTCATAT 59.295 43.478 0.00 0.00 0.00 1.78
3904 10946 4.891168 TCAGTGACTAACGCCCTTCATATA 59.109 41.667 0.00 0.00 0.00 0.86
3905 10947 5.538813 TCAGTGACTAACGCCCTTCATATAT 59.461 40.000 0.00 0.00 0.00 0.86
3906 10948 5.635280 CAGTGACTAACGCCCTTCATATATG 59.365 44.000 6.36 6.36 0.00 1.78
3907 10949 4.929808 GTGACTAACGCCCTTCATATATGG 59.070 45.833 12.78 0.00 0.00 2.74
3908 10950 4.591498 TGACTAACGCCCTTCATATATGGT 59.409 41.667 12.78 0.00 0.00 3.55
3909 10951 5.148651 ACTAACGCCCTTCATATATGGTC 57.851 43.478 12.78 0.00 0.00 4.02
3910 10952 4.591498 ACTAACGCCCTTCATATATGGTCA 59.409 41.667 12.78 0.00 0.00 4.02
3911 10953 4.431416 AACGCCCTTCATATATGGTCAA 57.569 40.909 12.78 0.00 0.00 3.18
3912 10954 4.640771 ACGCCCTTCATATATGGTCAAT 57.359 40.909 12.78 0.00 0.00 2.57
3913 10955 5.755409 ACGCCCTTCATATATGGTCAATA 57.245 39.130 12.78 0.00 0.00 1.90
3914 10956 6.313519 ACGCCCTTCATATATGGTCAATAT 57.686 37.500 12.78 0.00 35.55 1.28
3915 10957 6.349300 ACGCCCTTCATATATGGTCAATATC 58.651 40.000 12.78 0.00 33.35 1.63
3916 10958 6.156949 ACGCCCTTCATATATGGTCAATATCT 59.843 38.462 12.78 0.00 33.35 1.98
3917 10959 7.344612 ACGCCCTTCATATATGGTCAATATCTA 59.655 37.037 12.78 0.00 33.35 1.98
3918 10960 7.869937 CGCCCTTCATATATGGTCAATATCTAG 59.130 40.741 12.78 0.00 33.35 2.43
3919 10961 8.153550 GCCCTTCATATATGGTCAATATCTAGG 58.846 40.741 12.78 4.80 33.35 3.02
3920 10962 8.654997 CCCTTCATATATGGTCAATATCTAGGG 58.345 40.741 12.78 8.98 33.18 3.53
3921 10963 8.153550 CCTTCATATATGGTCAATATCTAGGGC 58.846 40.741 12.78 0.00 33.35 5.19
3922 10964 7.290110 TCATATATGGTCAATATCTAGGGCG 57.710 40.000 12.78 0.00 33.35 6.13
3923 10965 6.267699 TCATATATGGTCAATATCTAGGGCGG 59.732 42.308 12.78 0.00 33.35 6.13
3924 10966 2.391926 TGGTCAATATCTAGGGCGGA 57.608 50.000 0.00 0.00 0.00 5.54
3925 10967 2.902608 TGGTCAATATCTAGGGCGGAT 58.097 47.619 0.00 0.00 0.00 4.18
3926 10968 4.055710 TGGTCAATATCTAGGGCGGATA 57.944 45.455 0.00 0.00 0.00 2.59
3927 10969 4.422057 TGGTCAATATCTAGGGCGGATAA 58.578 43.478 0.00 0.00 30.78 1.75
3928 10970 4.466370 TGGTCAATATCTAGGGCGGATAAG 59.534 45.833 0.00 0.00 30.78 1.73
3929 10971 4.710375 GGTCAATATCTAGGGCGGATAAGA 59.290 45.833 0.00 0.00 30.78 2.10
3930 10972 5.163499 GGTCAATATCTAGGGCGGATAAGAG 60.163 48.000 0.00 0.00 30.78 2.85
3931 10973 4.956700 TCAATATCTAGGGCGGATAAGAGG 59.043 45.833 0.00 0.00 30.78 3.69
3932 10974 4.883021 ATATCTAGGGCGGATAAGAGGA 57.117 45.455 0.00 0.00 30.78 3.71
3933 10975 2.588464 TCTAGGGCGGATAAGAGGAG 57.412 55.000 0.00 0.00 0.00 3.69
3934 10976 1.075698 TCTAGGGCGGATAAGAGGAGG 59.924 57.143 0.00 0.00 0.00 4.30
3935 10977 0.542232 TAGGGCGGATAAGAGGAGGC 60.542 60.000 0.00 0.00 0.00 4.70
3936 10978 2.744377 GGCGGATAAGAGGAGGCC 59.256 66.667 0.00 0.00 0.00 5.19
3937 10979 2.744377 GCGGATAAGAGGAGGCCC 59.256 66.667 0.00 0.00 0.00 5.80
3938 10980 3.052081 CGGATAAGAGGAGGCCCG 58.948 66.667 0.00 0.00 37.58 6.13
3939 10981 2.574955 CGGATAAGAGGAGGCCCGG 61.575 68.421 0.00 0.00 37.58 5.73
3940 10982 1.152312 GGATAAGAGGAGGCCCGGA 60.152 63.158 0.73 0.00 37.58 5.14
3941 10983 0.545548 GGATAAGAGGAGGCCCGGAT 60.546 60.000 0.73 0.00 37.58 4.18
3942 10984 0.610687 GATAAGAGGAGGCCCGGATG 59.389 60.000 0.73 0.00 37.58 3.51
3943 10985 1.484444 ATAAGAGGAGGCCCGGATGC 61.484 60.000 0.73 0.00 37.58 3.91
3955 10997 3.782042 GGATGCGTCCGTCACTTC 58.218 61.111 9.75 0.00 34.13 3.01
3956 10998 2.158959 GGATGCGTCCGTCACTTCG 61.159 63.158 9.75 0.00 34.13 3.79
3966 11008 2.529136 CGTCACTTCGGACTAGACAG 57.471 55.000 0.00 0.00 35.63 3.51
3967 11009 2.074576 CGTCACTTCGGACTAGACAGA 58.925 52.381 0.00 0.00 35.63 3.41
3968 11010 2.678836 CGTCACTTCGGACTAGACAGAT 59.321 50.000 0.00 0.00 35.63 2.90
3969 11011 3.127203 CGTCACTTCGGACTAGACAGATT 59.873 47.826 0.00 0.00 35.63 2.40
3970 11012 4.416620 GTCACTTCGGACTAGACAGATTG 58.583 47.826 0.00 0.00 34.92 2.67
3971 11013 3.444034 TCACTTCGGACTAGACAGATTGG 59.556 47.826 0.00 0.00 0.00 3.16
3972 11014 3.444034 CACTTCGGACTAGACAGATTGGA 59.556 47.826 0.00 0.00 0.00 3.53
3973 11015 4.098654 CACTTCGGACTAGACAGATTGGAT 59.901 45.833 0.00 0.00 0.00 3.41
3974 11016 4.339814 ACTTCGGACTAGACAGATTGGATC 59.660 45.833 0.00 0.00 0.00 3.36
3975 11017 3.898482 TCGGACTAGACAGATTGGATCA 58.102 45.455 0.00 0.00 0.00 2.92
3976 11018 4.278310 TCGGACTAGACAGATTGGATCAA 58.722 43.478 0.00 0.00 0.00 2.57
3977 11019 4.895889 TCGGACTAGACAGATTGGATCAAT 59.104 41.667 0.00 0.00 36.72 2.57
3992 11034 9.820725 GATTGGATCAATCATAAATTTCACCAA 57.179 29.630 13.76 0.00 46.50 3.67
3995 11037 9.820725 TGGATCAATCATAAATTTCACCAAATC 57.179 29.630 0.00 0.00 30.37 2.17
3996 11038 9.264719 GGATCAATCATAAATTTCACCAAATCC 57.735 33.333 0.00 0.00 30.37 3.01
3997 11039 9.820725 GATCAATCATAAATTTCACCAAATCCA 57.179 29.630 0.00 0.00 30.37 3.41
3999 11041 9.602568 TCAATCATAAATTTCACCAAATCCATG 57.397 29.630 0.00 0.00 30.37 3.66
4000 11042 8.832521 CAATCATAAATTTCACCAAATCCATGG 58.167 33.333 4.97 4.97 46.38 3.66
4001 11043 6.347696 TCATAAATTTCACCAAATCCATGGC 58.652 36.000 6.96 0.00 44.75 4.40
4002 11044 3.632643 AATTTCACCAAATCCATGGCC 57.367 42.857 6.96 0.00 44.75 5.36
4003 11045 1.274712 TTTCACCAAATCCATGGCCC 58.725 50.000 6.96 0.00 44.75 5.80
4004 11046 0.413037 TTCACCAAATCCATGGCCCT 59.587 50.000 6.96 0.00 44.75 5.19
4005 11047 0.033208 TCACCAAATCCATGGCCCTC 60.033 55.000 6.96 0.00 44.75 4.30
4006 11048 1.044790 CACCAAATCCATGGCCCTCC 61.045 60.000 6.96 0.00 44.75 4.30
4007 11049 1.224003 ACCAAATCCATGGCCCTCCT 61.224 55.000 6.96 0.00 44.75 3.69
4008 11050 0.468771 CCAAATCCATGGCCCTCCTC 60.469 60.000 6.96 0.00 32.78 3.71
4009 11051 0.820891 CAAATCCATGGCCCTCCTCG 60.821 60.000 6.96 0.00 0.00 4.63
4010 11052 2.631012 AAATCCATGGCCCTCCTCGC 62.631 60.000 6.96 0.00 0.00 5.03
4023 11065 4.514577 CTCGCGGCCGTCCTTCAT 62.515 66.667 28.70 0.00 35.54 2.57
4024 11066 4.077184 TCGCGGCCGTCCTTCATT 62.077 61.111 28.70 0.00 35.54 2.57
4025 11067 3.124921 CGCGGCCGTCCTTCATTT 61.125 61.111 28.70 0.00 0.00 2.32
4026 11068 2.791927 GCGGCCGTCCTTCATTTC 59.208 61.111 28.70 0.93 0.00 2.17
4027 11069 2.761195 GCGGCCGTCCTTCATTTCC 61.761 63.158 28.70 0.32 0.00 3.13
4028 11070 1.078426 CGGCCGTCCTTCATTTCCT 60.078 57.895 19.50 0.00 0.00 3.36
4029 11071 1.369091 CGGCCGTCCTTCATTTCCTG 61.369 60.000 19.50 0.00 0.00 3.86
4030 11072 1.657751 GGCCGTCCTTCATTTCCTGC 61.658 60.000 0.00 0.00 0.00 4.85
4031 11073 1.657751 GCCGTCCTTCATTTCCTGCC 61.658 60.000 0.00 0.00 0.00 4.85
4032 11074 0.035056 CCGTCCTTCATTTCCTGCCT 60.035 55.000 0.00 0.00 0.00 4.75
4033 11075 1.373570 CGTCCTTCATTTCCTGCCTC 58.626 55.000 0.00 0.00 0.00 4.70
4034 11076 1.065854 CGTCCTTCATTTCCTGCCTCT 60.066 52.381 0.00 0.00 0.00 3.69
4035 11077 2.363683 GTCCTTCATTTCCTGCCTCTG 58.636 52.381 0.00 0.00 0.00 3.35
4036 11078 2.026822 GTCCTTCATTTCCTGCCTCTGA 60.027 50.000 0.00 0.00 0.00 3.27
4037 11079 2.238144 TCCTTCATTTCCTGCCTCTGAG 59.762 50.000 0.00 0.00 0.00 3.35
4038 11080 2.026449 CCTTCATTTCCTGCCTCTGAGT 60.026 50.000 3.66 0.00 0.00 3.41
4039 11081 3.269178 CTTCATTTCCTGCCTCTGAGTC 58.731 50.000 3.66 0.00 0.00 3.36
4040 11082 1.205655 TCATTTCCTGCCTCTGAGTCG 59.794 52.381 3.66 0.00 0.00 4.18
4041 11083 1.066573 CATTTCCTGCCTCTGAGTCGT 60.067 52.381 3.66 0.00 0.00 4.34
4042 11084 1.048601 TTTCCTGCCTCTGAGTCGTT 58.951 50.000 3.66 0.00 0.00 3.85
4043 11085 0.318441 TTCCTGCCTCTGAGTCGTTG 59.682 55.000 3.66 0.00 0.00 4.10
4044 11086 0.827925 TCCTGCCTCTGAGTCGTTGT 60.828 55.000 3.66 0.00 0.00 3.32
4045 11087 0.389166 CCTGCCTCTGAGTCGTTGTC 60.389 60.000 3.66 0.00 0.00 3.18
4046 11088 0.730834 CTGCCTCTGAGTCGTTGTCG 60.731 60.000 3.66 0.00 38.55 4.35
4047 11089 1.286260 GCCTCTGAGTCGTTGTCGT 59.714 57.895 3.66 0.00 38.33 4.34
4048 11090 0.729816 GCCTCTGAGTCGTTGTCGTC 60.730 60.000 3.66 0.00 38.33 4.20
4049 11091 0.109689 CCTCTGAGTCGTTGTCGTCC 60.110 60.000 3.66 0.00 38.33 4.79
4050 11092 0.875728 CTCTGAGTCGTTGTCGTCCT 59.124 55.000 0.00 0.00 38.33 3.85
4051 11093 0.873054 TCTGAGTCGTTGTCGTCCTC 59.127 55.000 0.00 0.00 37.00 3.71
4052 11094 0.109689 CTGAGTCGTTGTCGTCCTCC 60.110 60.000 0.00 0.00 36.30 4.30
4053 11095 0.820482 TGAGTCGTTGTCGTCCTCCA 60.820 55.000 0.00 0.00 36.30 3.86
4054 11096 0.526662 GAGTCGTTGTCGTCCTCCAT 59.473 55.000 0.00 0.00 38.33 3.41
4055 11097 0.526662 AGTCGTTGTCGTCCTCCATC 59.473 55.000 0.00 0.00 38.33 3.51
4056 11098 0.526662 GTCGTTGTCGTCCTCCATCT 59.473 55.000 0.00 0.00 38.33 2.90
4057 11099 1.067776 GTCGTTGTCGTCCTCCATCTT 60.068 52.381 0.00 0.00 38.33 2.40
4058 11100 1.616865 TCGTTGTCGTCCTCCATCTTT 59.383 47.619 0.00 0.00 38.33 2.52
4059 11101 1.726791 CGTTGTCGTCCTCCATCTTTG 59.273 52.381 0.00 0.00 0.00 2.77
4060 11102 1.464997 GTTGTCGTCCTCCATCTTTGC 59.535 52.381 0.00 0.00 0.00 3.68
4061 11103 0.976641 TGTCGTCCTCCATCTTTGCT 59.023 50.000 0.00 0.00 0.00 3.91
4062 11104 1.347707 TGTCGTCCTCCATCTTTGCTT 59.652 47.619 0.00 0.00 0.00 3.91
4063 11105 2.003301 GTCGTCCTCCATCTTTGCTTC 58.997 52.381 0.00 0.00 0.00 3.86
4064 11106 1.623311 TCGTCCTCCATCTTTGCTTCA 59.377 47.619 0.00 0.00 0.00 3.02
4065 11107 1.734465 CGTCCTCCATCTTTGCTTCAC 59.266 52.381 0.00 0.00 0.00 3.18
4066 11108 2.087646 GTCCTCCATCTTTGCTTCACC 58.912 52.381 0.00 0.00 0.00 4.02
4067 11109 1.704628 TCCTCCATCTTTGCTTCACCA 59.295 47.619 0.00 0.00 0.00 4.17
4068 11110 2.309755 TCCTCCATCTTTGCTTCACCAT 59.690 45.455 0.00 0.00 0.00 3.55
4069 11111 3.094572 CCTCCATCTTTGCTTCACCATT 58.905 45.455 0.00 0.00 0.00 3.16
4070 11112 3.129988 CCTCCATCTTTGCTTCACCATTC 59.870 47.826 0.00 0.00 0.00 2.67
4071 11113 2.749076 TCCATCTTTGCTTCACCATTCG 59.251 45.455 0.00 0.00 0.00 3.34
4072 11114 2.523015 CATCTTTGCTTCACCATTCGC 58.477 47.619 0.00 0.00 0.00 4.70
4073 11115 0.516877 TCTTTGCTTCACCATTCGCG 59.483 50.000 0.00 0.00 0.00 5.87
4074 11116 1.067199 CTTTGCTTCACCATTCGCGC 61.067 55.000 0.00 0.00 0.00 6.86
4075 11117 1.514678 TTTGCTTCACCATTCGCGCT 61.515 50.000 5.56 0.00 0.00 5.92
4076 11118 2.099062 GCTTCACCATTCGCGCTG 59.901 61.111 5.56 0.56 0.00 5.18
4077 11119 2.099062 CTTCACCATTCGCGCTGC 59.901 61.111 5.56 0.00 0.00 5.25
4078 11120 3.386867 CTTCACCATTCGCGCTGCC 62.387 63.158 5.56 0.00 0.00 4.85
4082 11124 4.545706 CCATTCGCGCTGCCCCTA 62.546 66.667 5.56 0.00 0.00 3.53
4083 11125 3.272334 CATTCGCGCTGCCCCTAC 61.272 66.667 5.56 0.00 0.00 3.18
4084 11126 4.547367 ATTCGCGCTGCCCCTACC 62.547 66.667 5.56 0.00 0.00 3.18
4088 11130 4.937431 GCGCTGCCCCTACCCATC 62.937 72.222 0.00 0.00 0.00 3.51
4089 11131 3.479203 CGCTGCCCCTACCCATCA 61.479 66.667 0.00 0.00 0.00 3.07
4090 11132 2.193248 GCTGCCCCTACCCATCAC 59.807 66.667 0.00 0.00 0.00 3.06
4091 11133 2.919043 CTGCCCCTACCCATCACC 59.081 66.667 0.00 0.00 0.00 4.02
4092 11134 2.694616 TGCCCCTACCCATCACCC 60.695 66.667 0.00 0.00 0.00 4.61
4093 11135 2.368329 GCCCCTACCCATCACCCT 60.368 66.667 0.00 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 9.113838 CTTAATGTCTAGCAAACATATGGAACT 57.886 33.333 7.80 1.66 36.35 3.01
23 24 9.109393 TCTTAATGTCTAGCAAACATATGGAAC 57.891 33.333 7.80 0.00 36.35 3.62
24 25 9.679661 TTCTTAATGTCTAGCAAACATATGGAA 57.320 29.630 7.80 0.54 36.35 3.53
25 26 9.679661 TTTCTTAATGTCTAGCAAACATATGGA 57.320 29.630 7.80 0.00 36.35 3.41
31 32 9.332502 TGTAGTTTTCTTAATGTCTAGCAAACA 57.667 29.630 0.00 0.00 32.37 2.83
34 35 9.772973 TCTTGTAGTTTTCTTAATGTCTAGCAA 57.227 29.630 0.00 0.00 0.00 3.91
35 36 9.944376 ATCTTGTAGTTTTCTTAATGTCTAGCA 57.056 29.630 0.00 0.00 0.00 3.49
58 59 9.678260 GAGGGAGTATCATGCAATAATAAATCT 57.322 33.333 0.00 0.00 36.25 2.40
59 60 8.897752 GGAGGGAGTATCATGCAATAATAAATC 58.102 37.037 0.00 0.00 36.25 2.17
60 61 7.554118 CGGAGGGAGTATCATGCAATAATAAAT 59.446 37.037 0.00 0.00 36.25 1.40
61 62 6.878923 CGGAGGGAGTATCATGCAATAATAAA 59.121 38.462 0.00 0.00 36.25 1.40
62 63 6.013725 ACGGAGGGAGTATCATGCAATAATAA 60.014 38.462 0.00 0.00 36.25 1.40
63 64 5.483937 ACGGAGGGAGTATCATGCAATAATA 59.516 40.000 0.00 0.00 36.25 0.98
64 65 4.287067 ACGGAGGGAGTATCATGCAATAAT 59.713 41.667 0.00 0.00 36.25 1.28
65 66 3.646162 ACGGAGGGAGTATCATGCAATAA 59.354 43.478 0.00 0.00 36.25 1.40
66 67 3.239449 ACGGAGGGAGTATCATGCAATA 58.761 45.455 0.00 0.00 36.25 1.90
67 68 2.050144 ACGGAGGGAGTATCATGCAAT 58.950 47.619 0.00 0.00 36.25 3.56
68 69 1.496060 ACGGAGGGAGTATCATGCAA 58.504 50.000 0.00 0.00 36.25 4.08
69 70 2.375014 TACGGAGGGAGTATCATGCA 57.625 50.000 0.00 0.00 36.25 3.96
70 71 3.069729 AGTTTACGGAGGGAGTATCATGC 59.930 47.826 0.00 0.00 36.25 4.06
71 72 4.939052 AGTTTACGGAGGGAGTATCATG 57.061 45.455 0.00 0.00 36.25 3.07
72 73 8.896722 ATATTAGTTTACGGAGGGAGTATCAT 57.103 34.615 0.00 0.00 36.25 2.45
73 74 9.812347 TTATATTAGTTTACGGAGGGAGTATCA 57.188 33.333 0.00 0.00 36.25 2.15
76 77 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
77 78 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
78 79 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
79 80 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
80 81 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
81 82 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
82 83 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
83 84 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
84 85 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
119 120 9.669353 CCGTAATAAGAGCGTTTAGATAACTAA 57.331 33.333 0.00 0.00 36.90 2.24
120 121 9.056005 TCCGTAATAAGAGCGTTTAGATAACTA 57.944 33.333 0.00 0.00 0.00 2.24
121 122 7.934457 TCCGTAATAAGAGCGTTTAGATAACT 58.066 34.615 0.00 0.00 0.00 2.24
122 123 7.325579 CCTCCGTAATAAGAGCGTTTAGATAAC 59.674 40.741 0.00 0.00 0.00 1.89
123 124 7.365741 CCTCCGTAATAAGAGCGTTTAGATAA 58.634 38.462 0.00 0.00 0.00 1.75
124 125 6.072286 CCCTCCGTAATAAGAGCGTTTAGATA 60.072 42.308 0.00 0.00 0.00 1.98
125 126 5.278858 CCCTCCGTAATAAGAGCGTTTAGAT 60.279 44.000 0.00 0.00 0.00 1.98
126 127 4.037208 CCCTCCGTAATAAGAGCGTTTAGA 59.963 45.833 0.00 0.00 0.00 2.10
127 128 4.037208 TCCCTCCGTAATAAGAGCGTTTAG 59.963 45.833 0.00 0.00 0.00 1.85
128 129 3.953612 TCCCTCCGTAATAAGAGCGTTTA 59.046 43.478 0.00 0.00 0.00 2.01
129 130 2.762327 TCCCTCCGTAATAAGAGCGTTT 59.238 45.455 0.00 0.00 0.00 3.60
130 131 2.361438 CTCCCTCCGTAATAAGAGCGTT 59.639 50.000 0.00 0.00 0.00 4.84
131 132 1.955080 CTCCCTCCGTAATAAGAGCGT 59.045 52.381 0.00 0.00 0.00 5.07
132 133 1.955080 ACTCCCTCCGTAATAAGAGCG 59.045 52.381 0.00 0.00 0.00 5.03
133 134 5.725325 ATTACTCCCTCCGTAATAAGAGC 57.275 43.478 0.00 0.00 36.19 4.09
206 209 3.379372 AGCATGGTAGCATGAAACATGAC 59.621 43.478 33.31 15.75 40.92 3.06
214 217 3.632643 TTTCTGAGCATGGTAGCATGA 57.367 42.857 33.31 15.27 36.85 3.07
285 288 1.087202 CAATACCCTGCGCGTTGCTA 61.087 55.000 8.43 0.00 46.63 3.49
419 424 6.000246 TGCTGGAGGATAACAAATGTATGA 58.000 37.500 0.00 0.00 0.00 2.15
434 439 2.092753 AGTATGGTGTCAATGCTGGAGG 60.093 50.000 0.00 0.00 0.00 4.30
438 443 7.087409 TGAAAATAGTATGGTGTCAATGCTG 57.913 36.000 0.00 0.00 0.00 4.41
529 534 3.380320 CGGGTGATATATCGGAGCATACA 59.620 47.826 8.19 0.00 0.00 2.29
552 557 8.416329 GGCTTTGACACATGGATTTAAAGATAT 58.584 33.333 12.72 0.00 0.00 1.63
559 564 5.479724 TGAATGGCTTTGACACATGGATTTA 59.520 36.000 0.00 0.00 0.00 1.40
560 565 4.283978 TGAATGGCTTTGACACATGGATTT 59.716 37.500 0.00 0.00 0.00 2.17
563 568 2.874014 TGAATGGCTTTGACACATGGA 58.126 42.857 0.00 0.00 0.00 3.41
608 613 5.045432 TCCCCGGTCAACTTTGATTAGTTAT 60.045 40.000 0.00 0.00 39.73 1.89
610 615 3.073356 TCCCCGGTCAACTTTGATTAGTT 59.927 43.478 0.00 0.00 39.73 2.24
615 620 2.899303 ATTCCCCGGTCAACTTTGAT 57.101 45.000 0.00 0.00 39.73 2.57
707 714 4.731313 AGAAAAACTTCCACTCAGGGAT 57.269 40.909 0.00 0.00 36.67 3.85
769 838 8.634444 GCTGAATAGGAGTAACTCTCTATCAAA 58.366 37.037 0.00 0.00 42.40 2.69
781 879 4.843728 CTTTGTGGGCTGAATAGGAGTAA 58.156 43.478 0.00 0.00 0.00 2.24
783 881 2.619074 GCTTTGTGGGCTGAATAGGAGT 60.619 50.000 0.00 0.00 0.00 3.85
784 882 2.019984 GCTTTGTGGGCTGAATAGGAG 58.980 52.381 0.00 0.00 0.00 3.69
997 1101 3.197790 CTGCTCCGACGCCATTGG 61.198 66.667 0.00 0.00 0.00 3.16
1004 1108 0.526524 GATGAAGGTCTGCTCCGACG 60.527 60.000 0.00 0.00 34.75 5.12
1005 1109 0.532573 TGATGAAGGTCTGCTCCGAC 59.467 55.000 0.00 0.00 0.00 4.79
1006 1110 1.137675 CATGATGAAGGTCTGCTCCGA 59.862 52.381 0.00 0.00 0.00 4.55
1070 1174 2.612604 GACGGGAGAGAAGAGAAAAGC 58.387 52.381 0.00 0.00 0.00 3.51
1073 1177 1.174783 CCGACGGGAGAGAAGAGAAA 58.825 55.000 5.81 0.00 34.06 2.52
1135 1239 6.397272 TGATTGAAGCAGAAACAAAAACAGT 58.603 32.000 0.00 0.00 0.00 3.55
1154 1258 2.967599 TGACCTCACCGATCTGATTG 57.032 50.000 0.00 0.00 0.00 2.67
1166 1270 1.219124 GAAGCGGCTGATGACCTCA 59.781 57.895 1.81 0.00 0.00 3.86
1399 1503 1.663379 CCCAGACCATAGCGACGACA 61.663 60.000 0.00 0.00 0.00 4.35
1574 1680 4.627467 CGCAATCAGGATAAGCTATACACC 59.373 45.833 0.00 0.00 0.00 4.16
1633 1740 5.650703 TCTCCACTACACATTCAAGTATCGA 59.349 40.000 0.00 0.00 0.00 3.59
1635 1742 7.101652 TCTCTCCACTACACATTCAAGTATC 57.898 40.000 0.00 0.00 0.00 2.24
1654 1761 4.815269 AGTAGTCTGCAACACAATCTCTC 58.185 43.478 0.00 0.00 0.00 3.20
1747 1905 3.869065 TGGACGATTTAGGCTTAGTTGG 58.131 45.455 0.00 0.00 0.00 3.77
1794 1961 7.867403 ACGCAAACAAGATTTTATGAACTGAAT 59.133 29.630 0.00 0.00 0.00 2.57
1847 2016 5.283060 AGTTCTGTCATACAATCAAACGC 57.717 39.130 0.00 0.00 0.00 4.84
1853 2022 6.763135 TGAGCCATAAGTTCTGTCATACAATC 59.237 38.462 0.00 0.00 0.00 2.67
1860 2029 3.264193 ACCATGAGCCATAAGTTCTGTCA 59.736 43.478 0.00 0.00 0.00 3.58
2126 2341 1.604278 GTTTGAAGGCTCACAGTGACC 59.396 52.381 0.00 6.61 0.00 4.02
2215 2430 8.785329 AGAAAGAAACAAAAGCAAAAACCATA 57.215 26.923 0.00 0.00 0.00 2.74
2237 2463 1.964223 AGCTCTTCACCGAGACAAGAA 59.036 47.619 0.00 0.00 32.74 2.52
2288 2514 4.570772 CCACAGAGGTTATGATAAACACGG 59.429 45.833 2.74 0.00 0.00 4.94
2289 2515 5.718649 CCACAGAGGTTATGATAAACACG 57.281 43.478 2.74 0.00 0.00 4.49
2327 2589 1.064314 AGCCGGTGCAATTGGGTAATA 60.064 47.619 7.72 0.00 41.13 0.98
2336 2598 0.813184 CTGAATCAAGCCGGTGCAAT 59.187 50.000 1.90 0.00 41.13 3.56
2377 2639 4.771054 AGAAGAAAGCATTGCAGAAATCCT 59.229 37.500 11.91 0.00 0.00 3.24
2428 2704 5.334802 GGCCCAAGCAAAATCAACAAAATAC 60.335 40.000 0.00 0.00 42.56 1.89
2478 2754 1.208052 GTAGCATCTCCAGTCAAGGCA 59.792 52.381 0.00 0.00 0.00 4.75
2507 2783 6.052360 GTGAAAAGTCCAAGAACTCTCTCTT 58.948 40.000 0.00 0.00 36.02 2.85
2699 6263 1.375908 CTCTTAGGCGGCAACTGCA 60.376 57.895 13.08 0.00 44.36 4.41
2842 6455 1.068281 AGTGCGCTGATCTGTAGATGG 59.932 52.381 9.73 0.00 34.37 3.51
2844 6457 2.027385 TGAGTGCGCTGATCTGTAGAT 58.973 47.619 3.44 0.00 37.51 1.98
2846 6459 1.133982 ACTGAGTGCGCTGATCTGTAG 59.866 52.381 3.44 5.60 0.00 2.74
2861 6474 0.590195 GCAGGTTCAAGTGCACTGAG 59.410 55.000 22.49 16.45 39.62 3.35
2862 6475 0.181114 AGCAGGTTCAAGTGCACTGA 59.819 50.000 22.49 16.73 42.47 3.41
2884 7703 8.537016 AGACACTAGTGTATTAAACAGGCATAA 58.463 33.333 27.98 0.00 45.05 1.90
2898 7722 7.145474 TGATACATAGGGAGACACTAGTGTA 57.855 40.000 27.98 12.27 45.05 2.90
2923 7747 7.637631 TGCAACCAGATAGCACAATTTATAA 57.362 32.000 0.00 0.00 32.55 0.98
2928 7752 4.708421 AGAATGCAACCAGATAGCACAATT 59.292 37.500 0.00 0.00 41.60 2.32
3224 8049 1.510480 GCAGATACCGCTTGGATGCC 61.510 60.000 0.00 0.00 36.26 4.40
3229 8054 1.153289 AGCAGCAGATACCGCTTGG 60.153 57.895 0.00 0.00 37.72 3.61
3294 8154 5.697633 AGCCATAATCAAAGCACAACAAAAG 59.302 36.000 0.00 0.00 0.00 2.27
3316 8176 4.083855 GGCAAAAGAAAAGTATGGCAAAGC 60.084 41.667 0.00 0.00 36.65 3.51
3324 8966 6.128090 GCTACTAACCGGCAAAAGAAAAGTAT 60.128 38.462 0.00 0.00 0.00 2.12
3338 8980 1.134521 TGGCATTCTGCTACTAACCGG 60.135 52.381 0.00 0.00 44.28 5.28
3339 8981 2.309528 TGGCATTCTGCTACTAACCG 57.690 50.000 0.00 0.00 44.28 4.44
3355 8997 3.427233 GCTGTGAAGATCATGAGTTTGGC 60.427 47.826 0.09 0.00 0.00 4.52
3356 8998 3.754850 TGCTGTGAAGATCATGAGTTTGG 59.245 43.478 0.09 0.00 0.00 3.28
3357 8999 5.366829 TTGCTGTGAAGATCATGAGTTTG 57.633 39.130 0.09 0.00 0.00 2.93
3358 9000 6.585695 ATTTGCTGTGAAGATCATGAGTTT 57.414 33.333 0.09 0.00 0.00 2.66
3359 9001 6.208007 TCAATTTGCTGTGAAGATCATGAGTT 59.792 34.615 0.09 0.00 0.00 3.01
3384 9026 5.463061 GTGCATCAAACAAAACTAAGCACAT 59.537 36.000 0.00 0.00 46.42 3.21
3432 9469 9.874215 GCTGTTAACGATATTAATAGTTTTCCC 57.126 33.333 0.26 0.00 33.59 3.97
3446 9484 7.042321 GCTACAATACCAATGCTGTTAACGATA 60.042 37.037 0.26 0.00 0.00 2.92
3509 9547 5.189934 AGGTTTTTGGTGGTAAAAATGACCA 59.810 36.000 0.00 0.00 44.86 4.02
3510 9548 5.676552 AGGTTTTTGGTGGTAAAAATGACC 58.323 37.500 0.00 0.00 40.43 4.02
3511 9549 6.259167 GGAAGGTTTTTGGTGGTAAAAATGAC 59.741 38.462 0.00 0.00 40.43 3.06
3512 9550 6.070194 TGGAAGGTTTTTGGTGGTAAAAATGA 60.070 34.615 0.00 0.00 40.43 2.57
3513 9551 6.116126 TGGAAGGTTTTTGGTGGTAAAAATG 58.884 36.000 0.00 0.00 40.43 2.32
3514 9552 6.314899 TGGAAGGTTTTTGGTGGTAAAAAT 57.685 33.333 0.00 0.00 40.43 1.82
3516 9554 5.248705 AGTTGGAAGGTTTTTGGTGGTAAAA 59.751 36.000 0.00 0.00 0.00 1.52
3518 9556 4.354662 AGTTGGAAGGTTTTTGGTGGTAA 58.645 39.130 0.00 0.00 0.00 2.85
3519 9557 3.983821 AGTTGGAAGGTTTTTGGTGGTA 58.016 40.909 0.00 0.00 0.00 3.25
3520 9558 2.827755 AGTTGGAAGGTTTTTGGTGGT 58.172 42.857 0.00 0.00 0.00 4.16
3521 9559 3.904800 AAGTTGGAAGGTTTTTGGTGG 57.095 42.857 0.00 0.00 0.00 4.61
3580 10607 2.185004 ATCCCACAAGAAGACAACCG 57.815 50.000 0.00 0.00 0.00 4.44
3586 10613 7.039784 CCAACAGATTAAAATCCCACAAGAAGA 60.040 37.037 0.00 0.00 36.04 2.87
3591 10618 5.047377 GCTCCAACAGATTAAAATCCCACAA 60.047 40.000 0.00 0.00 36.04 3.33
3593 10620 4.462483 TGCTCCAACAGATTAAAATCCCAC 59.538 41.667 0.00 0.00 36.04 4.61
3608 10635 5.754890 ACAAATCATCTTTTGTTGCTCCAAC 59.245 36.000 1.33 1.33 45.14 3.77
3657 10698 9.130661 TCCAGATGTGAAAAAGAACTAAATCAA 57.869 29.630 0.00 0.00 0.00 2.57
3665 10706 5.418310 TTCGTCCAGATGTGAAAAAGAAC 57.582 39.130 0.00 0.00 0.00 3.01
3679 10720 3.691118 ACAATGGAATCACATTCGTCCAG 59.309 43.478 0.00 0.00 43.22 3.86
3681 10722 3.689161 TCACAATGGAATCACATTCGTCC 59.311 43.478 0.00 0.00 38.94 4.79
3756 10798 9.787532 CTCAAATGAACAGTACTTTCAAAAAGA 57.212 29.630 18.18 13.98 36.57 2.52
3757 10799 8.534778 GCTCAAATGAACAGTACTTTCAAAAAG 58.465 33.333 18.18 14.77 36.57 2.27
3767 10809 3.741344 ACGTGAGCTCAAATGAACAGTAC 59.259 43.478 20.19 0.00 0.00 2.73
3780 10822 3.008664 CTCGAGTTCACGTGAGCTC 57.991 57.895 37.87 37.87 45.29 4.09
3782 10824 3.453465 GCTCGAGTTCACGTGAGC 58.547 61.111 23.14 23.14 45.95 4.26
3784 10826 0.881796 ATGAGCTCGAGTTCACGTGA 59.118 50.000 30.73 15.76 38.07 4.35
3785 10827 2.544480 TATGAGCTCGAGTTCACGTG 57.456 50.000 30.73 9.94 38.07 4.49
3786 10828 3.784701 ATTATGAGCTCGAGTTCACGT 57.215 42.857 30.73 19.82 38.07 4.49
3787 10829 4.849883 AGTATTATGAGCTCGAGTTCACG 58.150 43.478 30.73 0.00 38.07 4.35
3788 10830 7.394872 CAAAAGTATTATGAGCTCGAGTTCAC 58.605 38.462 30.73 18.80 38.07 3.18
3790 10832 6.256757 AGCAAAAGTATTATGAGCTCGAGTTC 59.743 38.462 21.09 21.09 0.00 3.01
3791 10833 6.109359 AGCAAAAGTATTATGAGCTCGAGTT 58.891 36.000 15.13 8.18 0.00 3.01
3793 10835 7.621013 GCATAGCAAAAGTATTATGAGCTCGAG 60.621 40.741 8.45 8.45 32.49 4.04
3796 10838 7.432350 AGCATAGCAAAAGTATTATGAGCTC 57.568 36.000 6.82 6.82 32.49 4.09
3797 10839 9.512588 AATAGCATAGCAAAAGTATTATGAGCT 57.487 29.630 0.00 0.00 34.84 4.09
3805 10847 7.880160 TGTTCCAATAGCATAGCAAAAGTAT 57.120 32.000 0.00 0.00 0.00 2.12
3806 10848 7.695480 TTGTTCCAATAGCATAGCAAAAGTA 57.305 32.000 0.00 0.00 0.00 2.24
3807 10849 6.588719 TTGTTCCAATAGCATAGCAAAAGT 57.411 33.333 0.00 0.00 0.00 2.66
3808 10850 7.037438 ACATTGTTCCAATAGCATAGCAAAAG 58.963 34.615 0.00 0.00 0.00 2.27
3809 10851 6.934056 ACATTGTTCCAATAGCATAGCAAAA 58.066 32.000 0.00 0.00 0.00 2.44
3810 10852 6.528537 ACATTGTTCCAATAGCATAGCAAA 57.471 33.333 0.00 0.00 0.00 3.68
3811 10853 6.601217 TGTACATTGTTCCAATAGCATAGCAA 59.399 34.615 0.00 0.00 0.00 3.91
3813 10855 6.618287 TGTACATTGTTCCAATAGCATAGC 57.382 37.500 0.00 0.00 0.00 2.97
3814 10856 6.293626 GGCTGTACATTGTTCCAATAGCATAG 60.294 42.308 0.00 0.00 0.00 2.23
3815 10857 5.530915 GGCTGTACATTGTTCCAATAGCATA 59.469 40.000 0.00 0.00 0.00 3.14
3816 10858 4.339247 GGCTGTACATTGTTCCAATAGCAT 59.661 41.667 0.00 0.00 0.00 3.79
3817 10859 3.694072 GGCTGTACATTGTTCCAATAGCA 59.306 43.478 0.00 1.69 0.00 3.49
3818 10860 3.242739 CGGCTGTACATTGTTCCAATAGC 60.243 47.826 0.00 0.00 0.00 2.97
3819 10861 4.188462 TCGGCTGTACATTGTTCCAATAG 58.812 43.478 0.00 0.00 0.00 1.73
3821 10863 3.009723 CTCGGCTGTACATTGTTCCAAT 58.990 45.455 0.00 0.00 0.00 3.16
3822 10864 2.422597 CTCGGCTGTACATTGTTCCAA 58.577 47.619 0.00 0.00 0.00 3.53
3823 10865 1.943968 GCTCGGCTGTACATTGTTCCA 60.944 52.381 0.00 0.00 0.00 3.53
3824 10866 0.727398 GCTCGGCTGTACATTGTTCC 59.273 55.000 0.00 0.00 0.00 3.62
3825 10867 1.726853 AGCTCGGCTGTACATTGTTC 58.273 50.000 0.00 0.00 37.57 3.18
3826 10868 2.076863 GAAGCTCGGCTGTACATTGTT 58.923 47.619 0.00 0.00 39.62 2.83
3827 10869 1.276421 AGAAGCTCGGCTGTACATTGT 59.724 47.619 0.00 0.00 39.62 2.71
3828 10870 1.929836 GAGAAGCTCGGCTGTACATTG 59.070 52.381 0.00 0.00 39.62 2.82
3829 10871 1.550524 TGAGAAGCTCGGCTGTACATT 59.449 47.619 0.00 0.00 39.62 2.71
3830 10872 1.186200 TGAGAAGCTCGGCTGTACAT 58.814 50.000 0.00 0.00 39.62 2.29
3831 10873 0.966179 TTGAGAAGCTCGGCTGTACA 59.034 50.000 0.00 0.00 39.62 2.90
3832 10874 2.080286 TTTGAGAAGCTCGGCTGTAC 57.920 50.000 0.00 0.00 39.62 2.90
3833 10875 2.621338 CATTTGAGAAGCTCGGCTGTA 58.379 47.619 0.00 0.00 39.62 2.74
3834 10876 1.446907 CATTTGAGAAGCTCGGCTGT 58.553 50.000 0.00 0.00 39.62 4.40
3835 10877 0.098376 GCATTTGAGAAGCTCGGCTG 59.902 55.000 0.00 0.00 39.62 4.85
3836 10878 1.028868 GGCATTTGAGAAGCTCGGCT 61.029 55.000 0.00 0.00 42.56 5.52
3837 10879 1.431036 GGCATTTGAGAAGCTCGGC 59.569 57.895 0.00 0.00 32.35 5.54
3838 10880 1.379642 GGGGCATTTGAGAAGCTCGG 61.380 60.000 0.00 0.00 32.35 4.63
3839 10881 0.393537 AGGGGCATTTGAGAAGCTCG 60.394 55.000 0.00 0.00 32.35 5.03
3840 10882 1.844687 AAGGGGCATTTGAGAAGCTC 58.155 50.000 0.00 0.00 0.00 4.09
3841 10883 2.357569 CCTAAGGGGCATTTGAGAAGCT 60.358 50.000 0.00 0.00 0.00 3.74
3842 10884 2.027385 CCTAAGGGGCATTTGAGAAGC 58.973 52.381 0.00 0.00 0.00 3.86
3843 10885 3.652057 TCCTAAGGGGCATTTGAGAAG 57.348 47.619 0.00 0.00 34.39 2.85
3844 10886 3.373001 CCATCCTAAGGGGCATTTGAGAA 60.373 47.826 0.00 0.00 34.39 2.87
3845 10887 2.175499 CCATCCTAAGGGGCATTTGAGA 59.825 50.000 0.00 0.00 34.39 3.27
3846 10888 2.590821 CCATCCTAAGGGGCATTTGAG 58.409 52.381 0.00 0.00 34.39 3.02
3847 10889 1.217689 CCCATCCTAAGGGGCATTTGA 59.782 52.381 0.00 0.00 40.23 2.69
3848 10890 1.217689 TCCCATCCTAAGGGGCATTTG 59.782 52.381 0.00 0.00 46.64 2.32
3849 10891 1.619298 TCCCATCCTAAGGGGCATTT 58.381 50.000 0.00 0.00 46.64 2.32
3850 10892 1.713078 GATCCCATCCTAAGGGGCATT 59.287 52.381 0.00 0.00 46.64 3.56
3851 10893 1.376649 GATCCCATCCTAAGGGGCAT 58.623 55.000 0.00 0.00 46.64 4.40
3852 10894 1.127567 CGATCCCATCCTAAGGGGCA 61.128 60.000 0.00 0.00 46.64 5.36
3853 10895 0.836400 TCGATCCCATCCTAAGGGGC 60.836 60.000 0.00 0.00 46.64 5.80
3856 10898 2.234908 GGTCATCGATCCCATCCTAAGG 59.765 54.545 0.00 0.00 0.00 2.69
3857 10899 2.234908 GGGTCATCGATCCCATCCTAAG 59.765 54.545 15.65 0.00 42.95 2.18
3858 10900 2.257207 GGGTCATCGATCCCATCCTAA 58.743 52.381 15.65 0.00 42.95 2.69
3859 10901 1.938585 GGGTCATCGATCCCATCCTA 58.061 55.000 15.65 0.00 42.95 2.94
3860 10902 2.765352 GGGTCATCGATCCCATCCT 58.235 57.895 15.65 0.00 42.95 3.24
3865 10907 0.390860 CTGACTGGGTCATCGATCCC 59.609 60.000 14.04 14.04 41.94 3.85
3866 10908 1.115467 ACTGACTGGGTCATCGATCC 58.885 55.000 0.00 0.00 41.94 3.36
3867 10909 1.751351 TCACTGACTGGGTCATCGATC 59.249 52.381 0.00 0.00 41.94 3.69
3868 10910 1.478510 GTCACTGACTGGGTCATCGAT 59.521 52.381 1.58 0.00 41.94 3.59
3869 10911 0.888619 GTCACTGACTGGGTCATCGA 59.111 55.000 1.58 0.00 41.94 3.59
3870 10912 0.891373 AGTCACTGACTGGGTCATCG 59.109 55.000 11.07 0.00 41.76 3.84
3871 10913 3.673594 CGTTAGTCACTGACTGGGTCATC 60.674 52.174 20.19 0.54 43.30 2.92
3872 10914 2.231478 CGTTAGTCACTGACTGGGTCAT 59.769 50.000 20.19 0.00 43.30 3.06
3873 10915 1.611977 CGTTAGTCACTGACTGGGTCA 59.388 52.381 20.19 0.00 43.30 4.02
3874 10916 1.669211 GCGTTAGTCACTGACTGGGTC 60.669 57.143 20.19 7.90 43.30 4.46
3875 10917 0.317479 GCGTTAGTCACTGACTGGGT 59.683 55.000 20.19 0.00 43.30 4.51
3876 10918 0.389948 GGCGTTAGTCACTGACTGGG 60.390 60.000 20.19 10.69 43.30 4.45
3877 10919 0.389948 GGGCGTTAGTCACTGACTGG 60.390 60.000 20.19 11.00 43.30 4.00
3878 10920 0.603569 AGGGCGTTAGTCACTGACTG 59.396 55.000 20.19 6.33 43.30 3.51
3879 10921 1.272769 GAAGGGCGTTAGTCACTGACT 59.727 52.381 16.00 16.00 45.54 3.41
3880 10922 1.000506 TGAAGGGCGTTAGTCACTGAC 59.999 52.381 0.38 0.38 0.00 3.51
3881 10923 1.334160 TGAAGGGCGTTAGTCACTGA 58.666 50.000 0.00 0.00 0.00 3.41
3882 10924 2.386661 ATGAAGGGCGTTAGTCACTG 57.613 50.000 0.00 0.00 0.00 3.66
3883 10925 5.279506 CCATATATGAAGGGCGTTAGTCACT 60.280 44.000 14.54 0.00 0.00 3.41
3884 10926 4.929808 CCATATATGAAGGGCGTTAGTCAC 59.070 45.833 14.54 0.00 0.00 3.67
3885 10927 4.591498 ACCATATATGAAGGGCGTTAGTCA 59.409 41.667 14.54 0.00 0.00 3.41
3886 10928 5.148651 ACCATATATGAAGGGCGTTAGTC 57.851 43.478 14.54 0.00 0.00 2.59
3887 10929 4.591498 TGACCATATATGAAGGGCGTTAGT 59.409 41.667 14.54 0.00 31.18 2.24
3888 10930 5.147330 TGACCATATATGAAGGGCGTTAG 57.853 43.478 14.54 0.00 31.18 2.34
3889 10931 5.554437 TTGACCATATATGAAGGGCGTTA 57.446 39.130 14.54 0.00 31.18 3.18
3890 10932 4.431416 TTGACCATATATGAAGGGCGTT 57.569 40.909 14.54 0.00 31.18 4.84
3891 10933 4.640771 ATTGACCATATATGAAGGGCGT 57.359 40.909 14.54 2.13 31.18 5.68
3892 10934 6.586344 AGATATTGACCATATATGAAGGGCG 58.414 40.000 14.54 0.00 31.18 6.13
3893 10935 8.153550 CCTAGATATTGACCATATATGAAGGGC 58.846 40.741 14.54 0.09 0.00 5.19
3894 10936 8.654997 CCCTAGATATTGACCATATATGAAGGG 58.345 40.741 14.54 9.31 34.03 3.95
3895 10937 8.153550 GCCCTAGATATTGACCATATATGAAGG 58.846 40.741 14.54 0.00 0.00 3.46
3896 10938 7.869937 CGCCCTAGATATTGACCATATATGAAG 59.130 40.741 14.54 0.94 0.00 3.02
3897 10939 7.202001 CCGCCCTAGATATTGACCATATATGAA 60.202 40.741 14.54 1.12 0.00 2.57
3898 10940 6.267699 CCGCCCTAGATATTGACCATATATGA 59.732 42.308 14.54 0.00 0.00 2.15
3899 10941 6.267699 TCCGCCCTAGATATTGACCATATATG 59.732 42.308 5.68 5.68 0.00 1.78
3900 10942 6.382087 TCCGCCCTAGATATTGACCATATAT 58.618 40.000 0.00 0.00 0.00 0.86
3901 10943 5.773091 TCCGCCCTAGATATTGACCATATA 58.227 41.667 0.00 0.00 0.00 0.86
3902 10944 4.620723 TCCGCCCTAGATATTGACCATAT 58.379 43.478 0.00 0.00 0.00 1.78
3903 10945 4.055710 TCCGCCCTAGATATTGACCATA 57.944 45.455 0.00 0.00 0.00 2.74
3904 10946 2.902608 TCCGCCCTAGATATTGACCAT 58.097 47.619 0.00 0.00 0.00 3.55
3905 10947 2.391926 TCCGCCCTAGATATTGACCA 57.608 50.000 0.00 0.00 0.00 4.02
3906 10948 4.710375 TCTTATCCGCCCTAGATATTGACC 59.290 45.833 0.00 0.00 0.00 4.02
3907 10949 5.163499 CCTCTTATCCGCCCTAGATATTGAC 60.163 48.000 0.00 0.00 0.00 3.18
3908 10950 4.956700 CCTCTTATCCGCCCTAGATATTGA 59.043 45.833 0.00 0.00 0.00 2.57
3909 10951 4.956700 TCCTCTTATCCGCCCTAGATATTG 59.043 45.833 0.00 0.00 0.00 1.90
3910 10952 5.205056 CTCCTCTTATCCGCCCTAGATATT 58.795 45.833 0.00 0.00 0.00 1.28
3911 10953 4.386986 CCTCCTCTTATCCGCCCTAGATAT 60.387 50.000 0.00 0.00 0.00 1.63
3912 10954 3.053544 CCTCCTCTTATCCGCCCTAGATA 60.054 52.174 0.00 0.00 0.00 1.98
3913 10955 2.291930 CCTCCTCTTATCCGCCCTAGAT 60.292 54.545 0.00 0.00 0.00 1.98
3914 10956 1.075698 CCTCCTCTTATCCGCCCTAGA 59.924 57.143 0.00 0.00 0.00 2.43
3915 10957 1.551452 CCTCCTCTTATCCGCCCTAG 58.449 60.000 0.00 0.00 0.00 3.02
3916 10958 0.542232 GCCTCCTCTTATCCGCCCTA 60.542 60.000 0.00 0.00 0.00 3.53
3917 10959 1.839296 GCCTCCTCTTATCCGCCCT 60.839 63.158 0.00 0.00 0.00 5.19
3918 10960 2.744377 GCCTCCTCTTATCCGCCC 59.256 66.667 0.00 0.00 0.00 6.13
3919 10961 2.744377 GGCCTCCTCTTATCCGCC 59.256 66.667 0.00 0.00 0.00 6.13
3920 10962 2.744377 GGGCCTCCTCTTATCCGC 59.256 66.667 0.84 0.00 0.00 5.54
3921 10963 2.574955 CCGGGCCTCCTCTTATCCG 61.575 68.421 0.84 0.00 37.50 4.18
3922 10964 0.545548 ATCCGGGCCTCCTCTTATCC 60.546 60.000 0.84 0.00 0.00 2.59
3923 10965 0.610687 CATCCGGGCCTCCTCTTATC 59.389 60.000 0.84 0.00 0.00 1.75
3924 10966 1.484444 GCATCCGGGCCTCCTCTTAT 61.484 60.000 0.84 0.00 0.00 1.73
3925 10967 2.140792 GCATCCGGGCCTCCTCTTA 61.141 63.158 0.84 0.00 0.00 2.10
3926 10968 3.483869 GCATCCGGGCCTCCTCTT 61.484 66.667 0.84 0.00 0.00 2.85
3938 10980 2.158959 CGAAGTGACGGACGCATCC 61.159 63.158 0.00 0.00 42.28 3.51
3939 10981 3.374330 CGAAGTGACGGACGCATC 58.626 61.111 0.00 0.00 0.00 3.91
3947 10989 2.074576 TCTGTCTAGTCCGAAGTGACG 58.925 52.381 0.00 0.00 40.26 4.35
3948 10990 4.416620 CAATCTGTCTAGTCCGAAGTGAC 58.583 47.826 0.00 0.00 35.43 3.67
3949 10991 3.444034 CCAATCTGTCTAGTCCGAAGTGA 59.556 47.826 0.00 0.00 0.00 3.41
3950 10992 3.444034 TCCAATCTGTCTAGTCCGAAGTG 59.556 47.826 0.00 0.00 0.00 3.16
3951 10993 3.698289 TCCAATCTGTCTAGTCCGAAGT 58.302 45.455 0.00 0.00 0.00 3.01
3952 10994 4.339530 TGATCCAATCTGTCTAGTCCGAAG 59.660 45.833 0.00 0.00 0.00 3.79
3953 10995 4.278310 TGATCCAATCTGTCTAGTCCGAA 58.722 43.478 0.00 0.00 0.00 4.30
3954 10996 3.898482 TGATCCAATCTGTCTAGTCCGA 58.102 45.455 0.00 0.00 0.00 4.55
3955 10997 4.655762 TTGATCCAATCTGTCTAGTCCG 57.344 45.455 0.00 0.00 0.00 4.79
3969 11011 9.820725 GATTTGGTGAAATTTATGATTGATCCA 57.179 29.630 0.00 0.00 31.58 3.41
3970 11012 9.264719 GGATTTGGTGAAATTTATGATTGATCC 57.735 33.333 0.00 0.00 31.58 3.36
3971 11013 9.820725 TGGATTTGGTGAAATTTATGATTGATC 57.179 29.630 0.00 0.00 31.58 2.92
3973 11015 9.602568 CATGGATTTGGTGAAATTTATGATTGA 57.397 29.630 0.00 0.00 32.40 2.57
3974 11016 8.832521 CCATGGATTTGGTGAAATTTATGATTG 58.167 33.333 5.56 0.00 32.40 2.67
3975 11017 7.499895 GCCATGGATTTGGTGAAATTTATGATT 59.500 33.333 18.40 0.00 39.11 2.57
3976 11018 6.993902 GCCATGGATTTGGTGAAATTTATGAT 59.006 34.615 18.40 0.00 39.11 2.45
3977 11019 6.347696 GCCATGGATTTGGTGAAATTTATGA 58.652 36.000 18.40 0.00 39.11 2.15
3978 11020 5.528320 GGCCATGGATTTGGTGAAATTTATG 59.472 40.000 18.40 0.00 39.11 1.90
3979 11021 5.397786 GGGCCATGGATTTGGTGAAATTTAT 60.398 40.000 18.40 0.00 39.11 1.40
3980 11022 4.080638 GGGCCATGGATTTGGTGAAATTTA 60.081 41.667 18.40 0.00 39.11 1.40
3981 11023 3.308331 GGGCCATGGATTTGGTGAAATTT 60.308 43.478 18.40 0.00 39.11 1.82
3982 11024 2.239402 GGGCCATGGATTTGGTGAAATT 59.761 45.455 18.40 0.00 39.11 1.82
3983 11025 1.839354 GGGCCATGGATTTGGTGAAAT 59.161 47.619 18.40 0.00 39.11 2.17
3984 11026 1.203288 AGGGCCATGGATTTGGTGAAA 60.203 47.619 18.40 0.00 39.11 2.69
3985 11027 0.413037 AGGGCCATGGATTTGGTGAA 59.587 50.000 18.40 0.00 39.11 3.18
3986 11028 0.033208 GAGGGCCATGGATTTGGTGA 60.033 55.000 18.40 0.00 39.11 4.02
3987 11029 1.044790 GGAGGGCCATGGATTTGGTG 61.045 60.000 18.40 0.00 39.11 4.17
3988 11030 1.224003 AGGAGGGCCATGGATTTGGT 61.224 55.000 18.40 0.00 39.11 3.67
3989 11031 0.468771 GAGGAGGGCCATGGATTTGG 60.469 60.000 18.40 0.00 39.94 3.28
3990 11032 0.820891 CGAGGAGGGCCATGGATTTG 60.821 60.000 18.40 0.00 36.29 2.32
3991 11033 1.533711 CGAGGAGGGCCATGGATTT 59.466 57.895 18.40 0.00 36.29 2.17
3992 11034 3.125376 GCGAGGAGGGCCATGGATT 62.125 63.158 18.40 0.00 36.29 3.01
3993 11035 3.564218 GCGAGGAGGGCCATGGAT 61.564 66.667 18.40 0.00 36.29 3.41
4006 11048 4.514577 ATGAAGGACGGCCGCGAG 62.515 66.667 28.58 0.00 39.96 5.03
4007 11049 3.599285 AAATGAAGGACGGCCGCGA 62.599 57.895 28.58 2.51 39.96 5.87
4008 11050 3.095898 GAAATGAAGGACGGCCGCG 62.096 63.158 28.58 1.99 39.96 6.46
4009 11051 2.761195 GGAAATGAAGGACGGCCGC 61.761 63.158 28.58 18.35 39.96 6.53
4010 11052 1.078426 AGGAAATGAAGGACGGCCG 60.078 57.895 26.86 26.86 39.96 6.13
4011 11053 1.657751 GCAGGAAATGAAGGACGGCC 61.658 60.000 0.00 0.00 0.00 6.13
4012 11054 1.657751 GGCAGGAAATGAAGGACGGC 61.658 60.000 0.00 0.00 0.00 5.68
4013 11055 0.035056 AGGCAGGAAATGAAGGACGG 60.035 55.000 0.00 0.00 0.00 4.79
4014 11056 1.065854 AGAGGCAGGAAATGAAGGACG 60.066 52.381 0.00 0.00 0.00 4.79
4015 11057 2.026822 TCAGAGGCAGGAAATGAAGGAC 60.027 50.000 0.00 0.00 0.00 3.85
4016 11058 2.238144 CTCAGAGGCAGGAAATGAAGGA 59.762 50.000 0.00 0.00 0.00 3.36
4017 11059 2.026449 ACTCAGAGGCAGGAAATGAAGG 60.026 50.000 1.53 0.00 0.00 3.46
4018 11060 3.269178 GACTCAGAGGCAGGAAATGAAG 58.731 50.000 0.00 0.00 0.00 3.02
4019 11061 2.354103 CGACTCAGAGGCAGGAAATGAA 60.354 50.000 3.54 0.00 0.00 2.57
4020 11062 1.205655 CGACTCAGAGGCAGGAAATGA 59.794 52.381 3.54 0.00 0.00 2.57
4021 11063 1.066573 ACGACTCAGAGGCAGGAAATG 60.067 52.381 3.54 0.00 0.00 2.32
4022 11064 1.270907 ACGACTCAGAGGCAGGAAAT 58.729 50.000 3.54 0.00 0.00 2.17
4023 11065 1.048601 AACGACTCAGAGGCAGGAAA 58.951 50.000 3.54 0.00 0.00 3.13
4024 11066 0.318441 CAACGACTCAGAGGCAGGAA 59.682 55.000 3.54 0.00 0.00 3.36
4025 11067 0.827925 ACAACGACTCAGAGGCAGGA 60.828 55.000 3.54 0.00 0.00 3.86
4026 11068 0.389166 GACAACGACTCAGAGGCAGG 60.389 60.000 3.54 0.00 0.00 4.85
4027 11069 0.730834 CGACAACGACTCAGAGGCAG 60.731 60.000 3.54 0.00 42.66 4.85
4028 11070 1.285950 CGACAACGACTCAGAGGCA 59.714 57.895 3.54 0.00 42.66 4.75
4029 11071 0.729816 GACGACAACGACTCAGAGGC 60.730 60.000 1.53 0.00 42.66 4.70
4030 11072 0.109689 GGACGACAACGACTCAGAGG 60.110 60.000 1.53 0.00 42.66 3.69
4031 11073 0.875728 AGGACGACAACGACTCAGAG 59.124 55.000 0.00 0.00 42.66 3.35
4032 11074 0.873054 GAGGACGACAACGACTCAGA 59.127 55.000 0.00 0.00 41.95 3.27
4033 11075 0.109689 GGAGGACGACAACGACTCAG 60.110 60.000 15.48 0.00 43.02 3.35
4034 11076 0.820482 TGGAGGACGACAACGACTCA 60.820 55.000 15.48 5.22 43.02 3.41
4035 11077 0.526662 ATGGAGGACGACAACGACTC 59.473 55.000 0.00 0.00 42.66 3.36
4036 11078 0.526662 GATGGAGGACGACAACGACT 59.473 55.000 0.00 0.00 42.66 4.18
4037 11079 0.526662 AGATGGAGGACGACAACGAC 59.473 55.000 0.00 0.00 42.66 4.34
4038 11080 1.254026 AAGATGGAGGACGACAACGA 58.746 50.000 0.00 0.00 42.66 3.85
4039 11081 1.726791 CAAAGATGGAGGACGACAACG 59.273 52.381 0.00 0.00 45.75 4.10
4040 11082 1.464997 GCAAAGATGGAGGACGACAAC 59.535 52.381 0.00 0.00 0.00 3.32
4041 11083 1.347707 AGCAAAGATGGAGGACGACAA 59.652 47.619 0.00 0.00 0.00 3.18
4042 11084 0.976641 AGCAAAGATGGAGGACGACA 59.023 50.000 0.00 0.00 0.00 4.35
4043 11085 2.003301 GAAGCAAAGATGGAGGACGAC 58.997 52.381 0.00 0.00 0.00 4.34
4044 11086 1.623311 TGAAGCAAAGATGGAGGACGA 59.377 47.619 0.00 0.00 0.00 4.20
4045 11087 1.734465 GTGAAGCAAAGATGGAGGACG 59.266 52.381 0.00 0.00 0.00 4.79
4046 11088 2.087646 GGTGAAGCAAAGATGGAGGAC 58.912 52.381 0.00 0.00 0.00 3.85
4047 11089 1.704628 TGGTGAAGCAAAGATGGAGGA 59.295 47.619 0.00 0.00 0.00 3.71
4048 11090 2.205022 TGGTGAAGCAAAGATGGAGG 57.795 50.000 0.00 0.00 0.00 4.30
4049 11091 3.181503 CGAATGGTGAAGCAAAGATGGAG 60.182 47.826 0.00 0.00 0.00 3.86
4050 11092 2.749076 CGAATGGTGAAGCAAAGATGGA 59.251 45.455 0.00 0.00 0.00 3.41
4051 11093 2.733227 GCGAATGGTGAAGCAAAGATGG 60.733 50.000 0.00 0.00 0.00 3.51
4052 11094 2.523015 GCGAATGGTGAAGCAAAGATG 58.477 47.619 0.00 0.00 0.00 2.90
4053 11095 1.131126 CGCGAATGGTGAAGCAAAGAT 59.869 47.619 0.00 0.00 0.00 2.40
4054 11096 0.516877 CGCGAATGGTGAAGCAAAGA 59.483 50.000 0.00 0.00 0.00 2.52
4055 11097 1.067199 GCGCGAATGGTGAAGCAAAG 61.067 55.000 12.10 0.00 0.00 2.77
4056 11098 1.081509 GCGCGAATGGTGAAGCAAA 60.082 52.632 12.10 0.00 0.00 3.68
4057 11099 1.965930 AGCGCGAATGGTGAAGCAA 60.966 52.632 12.10 0.00 0.00 3.91
4058 11100 2.358615 AGCGCGAATGGTGAAGCA 60.359 55.556 12.10 0.00 0.00 3.91
4059 11101 2.099062 CAGCGCGAATGGTGAAGC 59.901 61.111 12.10 0.00 39.68 3.86
4060 11102 2.099062 GCAGCGCGAATGGTGAAG 59.901 61.111 12.10 0.00 39.68 3.02
4061 11103 3.430862 GGCAGCGCGAATGGTGAA 61.431 61.111 12.10 0.00 39.68 3.18
4065 11107 4.545706 TAGGGGCAGCGCGAATGG 62.546 66.667 12.10 0.00 0.00 3.16
4066 11108 3.272334 GTAGGGGCAGCGCGAATG 61.272 66.667 12.10 9.16 0.00 2.67
4067 11109 4.547367 GGTAGGGGCAGCGCGAAT 62.547 66.667 12.10 0.00 0.00 3.34
4071 11113 4.937431 GATGGGTAGGGGCAGCGC 62.937 72.222 0.00 0.00 0.00 5.92
4072 11114 3.479203 TGATGGGTAGGGGCAGCG 61.479 66.667 0.00 0.00 0.00 5.18
4073 11115 2.193248 GTGATGGGTAGGGGCAGC 59.807 66.667 0.00 0.00 0.00 5.25
4074 11116 2.757124 GGGTGATGGGTAGGGGCAG 61.757 68.421 0.00 0.00 0.00 4.85
4075 11117 2.694616 GGGTGATGGGTAGGGGCA 60.695 66.667 0.00 0.00 0.00 5.36
4076 11118 2.368329 AGGGTGATGGGTAGGGGC 60.368 66.667 0.00 0.00 0.00 5.80


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.