Multiple sequence alignment - TraesCS1D01G216200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G216200 chr1D 100.000 6322 0 0 1 6322 301952633 301946312 0.000000e+00 11675.0
1 TraesCS1D01G216200 chr1D 98.174 219 4 0 352 570 301952063 301951845 3.580000e-102 383.0
2 TraesCS1D01G216200 chr1D 98.174 219 4 0 571 789 301952282 301952064 3.580000e-102 383.0
3 TraesCS1D01G216200 chr1D 97.041 169 5 0 3837 4005 490423316 490423148 1.040000e-72 285.0
4 TraesCS1D01G216200 chr1A 94.636 3039 106 30 813 3811 376674628 376671607 0.000000e+00 4656.0
5 TraesCS1D01G216200 chr1A 89.184 1017 44 21 4577 5580 376671069 376670106 0.000000e+00 1208.0
6 TraesCS1D01G216200 chr1A 95.730 562 16 5 4004 4562 376671609 376671053 0.000000e+00 898.0
7 TraesCS1D01G216200 chr1A 87.734 693 54 11 5658 6322 376670099 376669410 0.000000e+00 780.0
8 TraesCS1D01G216200 chr1B 96.570 2653 66 10 1201 3838 407548021 407545379 0.000000e+00 4372.0
9 TraesCS1D01G216200 chr1B 94.091 1337 34 15 3999 5329 407545380 407544083 0.000000e+00 1989.0
10 TraesCS1D01G216200 chr1B 84.284 999 89 27 5363 6322 407544080 407543111 0.000000e+00 913.0
11 TraesCS1D01G216200 chr1B 90.940 298 18 3 853 1143 407548316 407548021 5.940000e-105 392.0
12 TraesCS1D01G216200 chr6D 95.965 570 21 2 2 570 362259390 362258822 0.000000e+00 924.0
13 TraesCS1D01G216200 chr6D 94.376 569 19 6 2 570 362698368 362697813 0.000000e+00 861.0
14 TraesCS1D01G216200 chr6D 91.901 568 40 6 2 567 55765530 55766093 0.000000e+00 789.0
15 TraesCS1D01G216200 chr6D 93.750 240 13 1 571 810 362698031 362697794 6.030000e-95 359.0
16 TraesCS1D01G216200 chr6D 93.333 240 14 1 571 810 362259040 362258803 2.800000e-93 353.0
17 TraesCS1D01G216200 chr6D 95.604 182 8 0 3820 4001 34664400 34664581 6.200000e-75 292.0
18 TraesCS1D01G216200 chr6D 88.382 241 23 5 571 809 55765880 55766117 1.040000e-72 285.0
19 TraesCS1D01G216200 chr3B 92.632 570 39 3 2 570 643972835 643972268 0.000000e+00 817.0
20 TraesCS1D01G216200 chr3B 92.887 239 15 1 571 809 643972486 643972250 4.690000e-91 346.0
21 TraesCS1D01G216200 chr3B 84.270 267 20 12 5877 6121 65361757 65361491 2.280000e-59 241.0
22 TraesCS1D01G216200 chr3B 92.857 42 3 0 3484 3525 14152267 14152308 1.900000e-05 62.1
23 TraesCS1D01G216200 chr4D 91.404 570 25 6 2 570 175810874 175811420 0.000000e+00 760.0
24 TraesCS1D01G216200 chr4D 92.917 240 15 1 571 810 175811202 175811439 1.300000e-91 348.0
25 TraesCS1D01G216200 chr4A 91.481 270 22 1 14 282 110874670 110874939 2.780000e-98 370.0
26 TraesCS1D01G216200 chr4A 97.006 167 5 0 3834 4000 618164902 618165068 1.340000e-71 281.0
27 TraesCS1D01G216200 chr4A 89.286 56 6 0 267 322 110874973 110875028 3.160000e-08 71.3
28 TraesCS1D01G216200 chr5A 84.182 373 41 11 5770 6126 30558508 30558878 4.690000e-91 346.0
29 TraesCS1D01G216200 chr5A 84.475 219 25 5 5770 5983 30559671 30559885 2.310000e-49 207.0
30 TraesCS1D01G216200 chr5A 88.000 125 15 0 3157 3281 621546088 621545964 1.420000e-31 148.0
31 TraesCS1D01G216200 chrUn 84.298 363 45 10 5771 6126 65829701 65829344 1.690000e-90 344.0
32 TraesCS1D01G216200 chrUn 96.491 171 4 2 3837 4005 74119615 74119445 1.340000e-71 281.0
33 TraesCS1D01G216200 chr5B 84.298 363 45 10 5771 6126 36798489 36798846 1.690000e-90 344.0
34 TraesCS1D01G216200 chr5B 84.298 363 45 10 5771 6126 36829264 36829621 1.690000e-90 344.0
35 TraesCS1D01G216200 chr5B 84.196 367 41 12 5771 6126 36613550 36613190 2.180000e-89 340.0
36 TraesCS1D01G216200 chr5B 95.402 174 6 2 3836 4007 93472100 93472273 6.240000e-70 276.0
37 TraesCS1D01G216200 chr5B 83.471 121 15 4 338 457 177649433 177649317 2.410000e-19 108.0
38 TraesCS1D01G216200 chr5B 86.207 87 11 1 590 676 177649402 177649317 6.750000e-15 93.5
39 TraesCS1D01G216200 chr3D 88.327 257 15 10 5877 6122 42368061 42368313 1.720000e-75 294.0
40 TraesCS1D01G216200 chr3D 95.652 46 2 0 165 210 3525613 3525568 2.440000e-09 75.0
41 TraesCS1D01G216200 chr6A 97.576 165 4 0 3836 4000 98747563 98747399 3.730000e-72 283.0
42 TraesCS1D01G216200 chr6A 84.120 233 31 4 571 802 89307715 89307942 2.970000e-53 220.0
43 TraesCS1D01G216200 chr6A 83.691 233 31 5 339 570 89307703 89307929 4.960000e-51 213.0
44 TraesCS1D01G216200 chr6B 97.024 168 4 1 3835 4001 226362646 226362479 1.340000e-71 281.0
45 TraesCS1D01G216200 chr5D 97.024 168 4 1 3837 4003 303991760 303991593 1.340000e-71 281.0
46 TraesCS1D01G216200 chr5D 81.163 361 53 10 5770 6121 42066024 42066378 6.240000e-70 276.0
47 TraesCS1D01G216200 chr2B 94.886 176 9 0 3825 4000 47170921 47170746 6.240000e-70 276.0
48 TraesCS1D01G216200 chr3A 85.263 285 19 17 5877 6144 53335515 53335237 8.080000e-69 272.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G216200 chr1D 301946312 301952633 6321 True 4147.0 11675 98.782667 1 6322 3 chr1D.!!$R2 6321
1 TraesCS1D01G216200 chr1A 376669410 376674628 5218 True 1885.5 4656 91.821000 813 6322 4 chr1A.!!$R1 5509
2 TraesCS1D01G216200 chr1B 407543111 407548316 5205 True 1916.5 4372 91.471250 853 6322 4 chr1B.!!$R1 5469
3 TraesCS1D01G216200 chr6D 362258803 362259390 587 True 638.5 924 94.649000 2 810 2 chr6D.!!$R1 808
4 TraesCS1D01G216200 chr6D 362697794 362698368 574 True 610.0 861 94.063000 2 810 2 chr6D.!!$R2 808
5 TraesCS1D01G216200 chr6D 55765530 55766117 587 False 537.0 789 90.141500 2 809 2 chr6D.!!$F2 807
6 TraesCS1D01G216200 chr3B 643972250 643972835 585 True 581.5 817 92.759500 2 809 2 chr3B.!!$R2 807
7 TraesCS1D01G216200 chr4D 175810874 175811439 565 False 554.0 760 92.160500 2 810 2 chr4D.!!$F1 808
8 TraesCS1D01G216200 chr5A 30558508 30559885 1377 False 276.5 346 84.328500 5770 6126 2 chr5A.!!$F1 356

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
392 404 0.032017 AGACCTCGTGGGCCTTCTAT 60.032 55.000 5.55 0.0 44.45 1.98 F
535 547 0.036010 AGTGATTCAACGGCTGGGAG 60.036 55.000 0.00 0.0 0.00 4.30 F
543 555 0.106918 AACGGCTGGGAGTGTCAAAA 60.107 50.000 0.00 0.0 0.00 2.44 F
549 561 0.107410 TGGGAGTGTCAAAACGCTGT 60.107 50.000 0.00 0.0 46.11 4.40 F
550 562 0.307760 GGGAGTGTCAAAACGCTGTG 59.692 55.000 0.00 0.0 46.11 3.66 F
552 564 0.307760 GAGTGTCAAAACGCTGTGGG 59.692 55.000 0.00 0.0 46.11 4.61 F
1728 1768 0.657312 TGAAACTGCTGCACGACTTG 59.343 50.000 0.00 0.0 0.00 3.16 F
2660 2759 0.456221 AGAGCCGTGAGTATGTTCCG 59.544 55.000 0.00 0.0 0.00 4.30 F
3851 3952 1.569548 TGATCTACTCCCTCCGTTCCT 59.430 52.381 0.00 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1699 1739 0.179045 AGCAGTTTCAGCAGAACGGT 60.179 50.000 0.00 0.00 32.39 4.83 R
1854 1896 1.681538 ATCCGCTCGATAGTCACACT 58.318 50.000 0.00 0.00 37.40 3.55 R
1855 1897 2.493713 AATCCGCTCGATAGTCACAC 57.506 50.000 0.00 0.00 37.40 3.82 R
1856 1898 3.473625 TCTAATCCGCTCGATAGTCACA 58.526 45.455 0.00 0.00 37.40 3.58 R
1857 1899 4.688511 ATCTAATCCGCTCGATAGTCAC 57.311 45.455 0.00 0.00 37.40 3.67 R
2148 2247 7.380602 GGATCACATATTTGCAATTTACTGCTC 59.619 37.037 0.00 0.00 43.07 4.26 R
2911 3010 1.882912 TGTGAACAGCAGCTAACTGG 58.117 50.000 17.59 3.35 44.63 4.00 R
3984 4085 3.991683 AGTAAATACTCCCTCCGTTCCT 58.008 45.455 0.00 0.00 0.00 3.36 R
5604 5753 0.108804 TGTTGCGAGGGAAGATCGTC 60.109 55.000 0.00 0.00 42.13 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
211 223 0.396001 GCCGAGGAAGAGTAGAGGGT 60.396 60.000 0.00 0.00 0.00 4.34
212 224 1.394618 CCGAGGAAGAGTAGAGGGTG 58.605 60.000 0.00 0.00 0.00 4.61
213 225 1.064611 CCGAGGAAGAGTAGAGGGTGA 60.065 57.143 0.00 0.00 0.00 4.02
214 226 2.294074 CGAGGAAGAGTAGAGGGTGAG 58.706 57.143 0.00 0.00 0.00 3.51
215 227 2.356330 CGAGGAAGAGTAGAGGGTGAGT 60.356 54.545 0.00 0.00 0.00 3.41
218 230 3.592427 AGGAAGAGTAGAGGGTGAGTACA 59.408 47.826 0.00 0.00 0.00 2.90
219 231 4.230964 AGGAAGAGTAGAGGGTGAGTACAT 59.769 45.833 0.00 0.00 0.00 2.29
220 232 4.339814 GGAAGAGTAGAGGGTGAGTACATG 59.660 50.000 0.00 0.00 0.00 3.21
221 233 3.904717 AGAGTAGAGGGTGAGTACATGG 58.095 50.000 0.00 0.00 0.00 3.66
222 234 2.362717 GAGTAGAGGGTGAGTACATGGC 59.637 54.545 0.00 0.00 0.00 4.40
223 235 2.108168 GTAGAGGGTGAGTACATGGCA 58.892 52.381 0.00 0.00 0.00 4.92
224 236 1.885049 AGAGGGTGAGTACATGGCAT 58.115 50.000 0.00 0.00 0.00 4.40
225 237 1.765314 AGAGGGTGAGTACATGGCATC 59.235 52.381 0.00 0.00 0.00 3.91
226 238 0.465705 AGGGTGAGTACATGGCATCG 59.534 55.000 0.00 0.00 0.00 3.84
227 239 0.464036 GGGTGAGTACATGGCATCGA 59.536 55.000 0.00 0.00 0.00 3.59
228 240 1.571919 GGTGAGTACATGGCATCGAC 58.428 55.000 0.00 0.00 0.00 4.20
229 241 1.200483 GTGAGTACATGGCATCGACG 58.800 55.000 0.00 0.00 0.00 5.12
324 336 2.029365 GCAGCTCGAGGATACGTTTTTC 59.971 50.000 15.58 0.00 46.39 2.29
341 353 5.344665 CGTTTTTCTTTTGTGAAACTGCTCA 59.655 36.000 0.00 0.00 38.04 4.26
362 374 3.567478 AGGATAGGTTTGGAGACATGC 57.433 47.619 0.00 0.00 42.32 4.06
363 375 3.118531 AGGATAGGTTTGGAGACATGCT 58.881 45.455 0.00 0.00 42.32 3.79
364 376 3.135530 AGGATAGGTTTGGAGACATGCTC 59.864 47.826 8.20 8.20 42.32 4.26
374 386 3.347958 GAGACATGCTCCGTTAGAGAG 57.652 52.381 0.00 0.00 46.50 3.20
375 387 2.946329 GAGACATGCTCCGTTAGAGAGA 59.054 50.000 0.00 0.00 46.50 3.10
376 388 2.685897 AGACATGCTCCGTTAGAGAGAC 59.314 50.000 0.00 0.00 46.50 3.36
377 389 1.751924 ACATGCTCCGTTAGAGAGACC 59.248 52.381 0.00 0.00 46.50 3.85
378 390 2.028130 CATGCTCCGTTAGAGAGACCT 58.972 52.381 0.00 0.00 46.50 3.85
379 391 1.752683 TGCTCCGTTAGAGAGACCTC 58.247 55.000 0.00 0.00 46.50 3.85
380 392 0.658897 GCTCCGTTAGAGAGACCTCG 59.341 60.000 0.00 0.00 46.50 4.63
381 393 2.013058 GCTCCGTTAGAGAGACCTCGT 61.013 57.143 0.00 0.00 46.50 4.18
382 394 1.666700 CTCCGTTAGAGAGACCTCGTG 59.333 57.143 0.00 0.00 46.50 4.35
383 395 0.733729 CCGTTAGAGAGACCTCGTGG 59.266 60.000 0.99 0.99 44.08 4.94
384 396 0.733729 CGTTAGAGAGACCTCGTGGG 59.266 60.000 8.63 2.00 44.08 4.61
385 397 0.456628 GTTAGAGAGACCTCGTGGGC 59.543 60.000 8.63 4.52 44.08 5.36
386 398 0.683504 TTAGAGAGACCTCGTGGGCC 60.684 60.000 5.55 0.00 44.45 5.80
387 399 1.572689 TAGAGAGACCTCGTGGGCCT 61.573 60.000 5.55 2.72 44.45 5.19
388 400 1.985116 GAGAGACCTCGTGGGCCTT 60.985 63.158 5.55 0.00 44.45 4.35
389 401 1.950973 GAGAGACCTCGTGGGCCTTC 61.951 65.000 5.55 0.04 44.45 3.46
390 402 1.985116 GAGACCTCGTGGGCCTTCT 60.985 63.158 5.55 0.00 44.45 2.85
391 403 0.683504 GAGACCTCGTGGGCCTTCTA 60.684 60.000 5.55 0.00 44.45 2.10
392 404 0.032017 AGACCTCGTGGGCCTTCTAT 60.032 55.000 5.55 0.00 44.45 1.98
393 405 0.389757 GACCTCGTGGGCCTTCTATC 59.610 60.000 4.53 0.00 39.10 2.08
394 406 0.325296 ACCTCGTGGGCCTTCTATCA 60.325 55.000 4.53 0.00 39.10 2.15
395 407 0.830648 CCTCGTGGGCCTTCTATCAA 59.169 55.000 4.53 0.00 0.00 2.57
396 408 1.209504 CCTCGTGGGCCTTCTATCAAA 59.790 52.381 4.53 0.00 0.00 2.69
397 409 2.280628 CTCGTGGGCCTTCTATCAAAC 58.719 52.381 4.53 0.00 0.00 2.93
398 410 1.006832 CGTGGGCCTTCTATCAAACG 58.993 55.000 4.53 0.00 0.00 3.60
399 411 1.379527 GTGGGCCTTCTATCAAACGG 58.620 55.000 4.53 0.00 0.00 4.44
400 412 0.393808 TGGGCCTTCTATCAAACGGC 60.394 55.000 4.53 0.00 39.98 5.68
402 414 2.405143 GCCTTCTATCAAACGGCCC 58.595 57.895 0.00 0.00 34.75 5.80
403 415 0.393808 GCCTTCTATCAAACGGCCCA 60.394 55.000 0.00 0.00 34.75 5.36
404 416 1.953311 GCCTTCTATCAAACGGCCCAA 60.953 52.381 0.00 0.00 34.75 4.12
405 417 2.654863 CCTTCTATCAAACGGCCCAAT 58.345 47.619 0.00 0.00 0.00 3.16
406 418 3.023832 CCTTCTATCAAACGGCCCAATT 58.976 45.455 0.00 0.00 0.00 2.32
407 419 3.066760 CCTTCTATCAAACGGCCCAATTC 59.933 47.826 0.00 0.00 0.00 2.17
408 420 2.285083 TCTATCAAACGGCCCAATTCG 58.715 47.619 0.00 0.00 0.00 3.34
409 421 1.333619 CTATCAAACGGCCCAATTCGG 59.666 52.381 0.00 0.00 0.00 4.30
420 432 2.755836 CCAATTCGGGACAATTAGCG 57.244 50.000 0.00 0.00 0.00 4.26
421 433 1.268539 CCAATTCGGGACAATTAGCGC 60.269 52.381 0.00 0.00 0.00 5.92
422 434 1.400142 CAATTCGGGACAATTAGCGCA 59.600 47.619 11.47 0.00 0.00 6.09
423 435 1.745232 ATTCGGGACAATTAGCGCAA 58.255 45.000 11.47 1.85 0.00 4.85
424 436 0.800012 TTCGGGACAATTAGCGCAAC 59.200 50.000 11.47 0.00 0.00 4.17
425 437 0.036765 TCGGGACAATTAGCGCAACT 60.037 50.000 11.47 0.00 0.00 3.16
426 438 0.373716 CGGGACAATTAGCGCAACTC 59.626 55.000 11.47 0.00 0.00 3.01
427 439 0.373716 GGGACAATTAGCGCAACTCG 59.626 55.000 11.47 0.00 42.12 4.18
428 440 1.076332 GGACAATTAGCGCAACTCGT 58.924 50.000 11.47 0.00 41.07 4.18
429 441 1.463444 GGACAATTAGCGCAACTCGTT 59.537 47.619 11.47 0.00 41.07 3.85
430 442 2.474032 GGACAATTAGCGCAACTCGTTC 60.474 50.000 11.47 0.00 41.07 3.95
431 443 2.412089 GACAATTAGCGCAACTCGTTCT 59.588 45.455 11.47 0.00 41.07 3.01
432 444 2.412089 ACAATTAGCGCAACTCGTTCTC 59.588 45.455 11.47 0.00 41.07 2.87
433 445 1.641577 ATTAGCGCAACTCGTTCTCC 58.358 50.000 11.47 0.00 41.07 3.71
434 446 0.731514 TTAGCGCAACTCGTTCTCCG 60.732 55.000 11.47 0.00 41.07 4.63
435 447 2.537792 TAGCGCAACTCGTTCTCCGG 62.538 60.000 11.47 0.00 41.07 5.14
436 448 2.257371 CGCAACTCGTTCTCCGGA 59.743 61.111 2.93 2.93 37.11 5.14
437 449 1.801913 CGCAACTCGTTCTCCGGAG 60.802 63.158 26.32 26.32 37.11 4.63
438 450 2.095252 GCAACTCGTTCTCCGGAGC 61.095 63.158 27.39 12.82 37.11 4.70
439 451 1.289066 CAACTCGTTCTCCGGAGCA 59.711 57.895 27.39 14.29 37.11 4.26
440 452 0.734253 CAACTCGTTCTCCGGAGCAG 60.734 60.000 27.39 19.68 37.11 4.24
441 453 2.202676 CTCGTTCTCCGGAGCAGC 60.203 66.667 27.39 16.71 37.11 5.25
442 454 2.989253 TCGTTCTCCGGAGCAGCA 60.989 61.111 27.39 6.53 37.11 4.41
443 455 2.507992 CGTTCTCCGGAGCAGCAG 60.508 66.667 27.39 11.70 0.00 4.24
444 456 2.817396 GTTCTCCGGAGCAGCAGC 60.817 66.667 27.39 7.82 42.56 5.25
445 457 4.087892 TTCTCCGGAGCAGCAGCC 62.088 66.667 27.39 0.00 43.56 4.85
450 462 4.399395 CGGAGCAGCAGCCCAGAA 62.399 66.667 0.00 0.00 43.56 3.02
451 463 2.034687 GGAGCAGCAGCCCAGAAA 59.965 61.111 0.00 0.00 43.56 2.52
452 464 1.604593 GGAGCAGCAGCCCAGAAAA 60.605 57.895 0.00 0.00 43.56 2.29
453 465 1.583477 GAGCAGCAGCCCAGAAAAC 59.417 57.895 0.00 0.00 43.56 2.43
454 466 2.192608 GAGCAGCAGCCCAGAAAACG 62.193 60.000 0.00 0.00 43.56 3.60
455 467 2.956987 CAGCAGCCCAGAAAACGG 59.043 61.111 0.00 0.00 0.00 4.44
456 468 1.898574 CAGCAGCCCAGAAAACGGT 60.899 57.895 0.00 0.00 0.00 4.83
457 469 1.898574 AGCAGCCCAGAAAACGGTG 60.899 57.895 0.00 0.00 0.00 4.94
458 470 2.644992 CAGCCCAGAAAACGGTGC 59.355 61.111 0.00 0.00 0.00 5.01
459 471 2.597510 AGCCCAGAAAACGGTGCC 60.598 61.111 0.00 0.00 0.00 5.01
460 472 2.597510 GCCCAGAAAACGGTGCCT 60.598 61.111 0.00 0.00 0.00 4.75
461 473 2.200337 GCCCAGAAAACGGTGCCTT 61.200 57.895 0.00 0.00 0.00 4.35
462 474 1.744320 GCCCAGAAAACGGTGCCTTT 61.744 55.000 0.00 0.00 0.00 3.11
463 475 0.313987 CCCAGAAAACGGTGCCTTTC 59.686 55.000 0.00 0.00 32.72 2.62
464 476 1.028905 CCAGAAAACGGTGCCTTTCA 58.971 50.000 6.57 0.00 34.60 2.69
465 477 1.001378 CCAGAAAACGGTGCCTTTCAG 60.001 52.381 6.57 0.00 34.60 3.02
466 478 0.668535 AGAAAACGGTGCCTTTCAGC 59.331 50.000 6.57 0.00 39.70 4.26
467 479 0.383949 GAAAACGGTGCCTTTCAGCA 59.616 50.000 0.19 0.00 43.09 4.41
468 480 0.385390 AAAACGGTGCCTTTCAGCAG 59.615 50.000 0.00 0.00 45.14 4.24
469 481 0.751643 AAACGGTGCCTTTCAGCAGT 60.752 50.000 0.00 0.00 45.14 4.40
470 482 1.166531 AACGGTGCCTTTCAGCAGTC 61.167 55.000 0.00 0.00 45.14 3.51
471 483 1.597854 CGGTGCCTTTCAGCAGTCA 60.598 57.895 0.00 0.00 45.14 3.41
472 484 1.572085 CGGTGCCTTTCAGCAGTCAG 61.572 60.000 0.00 0.00 45.14 3.51
473 485 1.578423 GTGCCTTTCAGCAGTCAGC 59.422 57.895 0.00 0.00 45.14 4.26
484 496 0.512952 GCAGTCAGCGTTACAACTGG 59.487 55.000 9.53 0.00 39.57 4.00
485 497 1.148310 CAGTCAGCGTTACAACTGGG 58.852 55.000 3.13 0.00 36.36 4.45
486 498 1.045407 AGTCAGCGTTACAACTGGGA 58.955 50.000 3.13 0.00 34.57 4.37
487 499 1.145803 GTCAGCGTTACAACTGGGAC 58.854 55.000 3.13 0.00 34.57 4.46
488 500 0.319211 TCAGCGTTACAACTGGGACG 60.319 55.000 3.13 0.00 38.45 4.79
489 501 1.005394 AGCGTTACAACTGGGACGG 60.005 57.895 8.51 0.00 42.99 4.79
490 502 2.674084 GCGTTACAACTGGGACGGC 61.674 63.158 8.51 0.00 39.14 5.68
491 503 2.030958 CGTTACAACTGGGACGGCC 61.031 63.158 0.00 0.00 39.14 6.13
492 504 2.030958 GTTACAACTGGGACGGCCG 61.031 63.158 26.86 26.86 39.14 6.13
493 505 2.208619 TTACAACTGGGACGGCCGA 61.209 57.895 35.90 8.44 39.14 5.54
494 506 1.546589 TTACAACTGGGACGGCCGAT 61.547 55.000 35.90 16.95 39.14 4.18
495 507 1.952102 TACAACTGGGACGGCCGATC 61.952 60.000 35.90 24.28 39.14 3.69
496 508 3.000819 AACTGGGACGGCCGATCA 61.001 61.111 35.90 23.65 39.14 2.92
497 509 2.589157 AACTGGGACGGCCGATCAA 61.589 57.895 35.90 15.73 39.14 2.57
498 510 2.119484 AACTGGGACGGCCGATCAAA 62.119 55.000 35.90 15.27 39.14 2.69
499 511 1.153168 CTGGGACGGCCGATCAAAT 60.153 57.895 35.90 8.10 33.83 2.32
500 512 1.153249 TGGGACGGCCGATCAAATC 60.153 57.895 35.90 17.99 33.83 2.17
501 513 1.146263 GGGACGGCCGATCAAATCT 59.854 57.895 35.90 6.14 33.83 2.40
502 514 0.463833 GGGACGGCCGATCAAATCTT 60.464 55.000 35.90 5.18 33.83 2.40
503 515 0.657840 GGACGGCCGATCAAATCTTG 59.342 55.000 35.90 0.00 0.00 3.02
504 516 1.369625 GACGGCCGATCAAATCTTGT 58.630 50.000 35.90 3.54 0.00 3.16
505 517 1.062587 GACGGCCGATCAAATCTTGTG 59.937 52.381 35.90 0.00 0.00 3.33
506 518 0.248215 CGGCCGATCAAATCTTGTGC 60.248 55.000 24.07 0.00 0.00 4.57
507 519 0.248215 GGCCGATCAAATCTTGTGCG 60.248 55.000 0.00 0.00 0.00 5.34
508 520 0.447801 GCCGATCAAATCTTGTGCGT 59.552 50.000 0.00 0.00 0.00 5.24
509 521 1.663643 GCCGATCAAATCTTGTGCGTA 59.336 47.619 0.00 0.00 0.00 4.42
510 522 2.285834 GCCGATCAAATCTTGTGCGTAG 60.286 50.000 0.00 0.00 0.00 3.51
511 523 3.186909 CCGATCAAATCTTGTGCGTAGA 58.813 45.455 0.00 0.00 0.00 2.59
512 524 3.804325 CCGATCAAATCTTGTGCGTAGAT 59.196 43.478 0.00 0.00 33.87 1.98
513 525 4.318333 CCGATCAAATCTTGTGCGTAGATG 60.318 45.833 0.00 0.00 32.82 2.90
514 526 4.504097 CGATCAAATCTTGTGCGTAGATGA 59.496 41.667 0.00 0.00 32.82 2.92
515 527 5.555256 CGATCAAATCTTGTGCGTAGATGAC 60.555 44.000 0.00 0.00 32.82 3.06
516 528 4.565022 TCAAATCTTGTGCGTAGATGACA 58.435 39.130 0.00 0.00 32.82 3.58
517 529 4.627035 TCAAATCTTGTGCGTAGATGACAG 59.373 41.667 0.00 0.00 32.82 3.51
518 530 3.876274 ATCTTGTGCGTAGATGACAGT 57.124 42.857 0.00 0.00 31.32 3.55
519 531 2.946564 TCTTGTGCGTAGATGACAGTG 58.053 47.619 0.00 0.00 0.00 3.66
520 532 2.556622 TCTTGTGCGTAGATGACAGTGA 59.443 45.455 0.00 0.00 0.00 3.41
521 533 3.193479 TCTTGTGCGTAGATGACAGTGAT 59.807 43.478 0.00 0.00 0.00 3.06
522 534 3.592898 TGTGCGTAGATGACAGTGATT 57.407 42.857 0.00 0.00 0.00 2.57
523 535 3.511699 TGTGCGTAGATGACAGTGATTC 58.488 45.455 0.00 0.00 0.00 2.52
524 536 3.056891 TGTGCGTAGATGACAGTGATTCA 60.057 43.478 0.00 0.00 0.00 2.57
525 537 3.926527 GTGCGTAGATGACAGTGATTCAA 59.073 43.478 0.00 0.00 0.00 2.69
526 538 3.926527 TGCGTAGATGACAGTGATTCAAC 59.073 43.478 0.00 0.00 0.00 3.18
527 539 3.000674 GCGTAGATGACAGTGATTCAACG 60.001 47.826 0.00 0.00 31.11 4.10
528 540 3.547868 CGTAGATGACAGTGATTCAACGG 59.452 47.826 0.00 0.00 0.00 4.44
529 541 2.350522 AGATGACAGTGATTCAACGGC 58.649 47.619 0.00 0.00 0.00 5.68
530 542 2.027745 AGATGACAGTGATTCAACGGCT 60.028 45.455 0.00 0.00 0.00 5.52
531 543 1.511850 TGACAGTGATTCAACGGCTG 58.488 50.000 0.00 0.00 0.00 4.85
532 544 0.798776 GACAGTGATTCAACGGCTGG 59.201 55.000 0.00 0.00 0.00 4.85
533 545 0.606401 ACAGTGATTCAACGGCTGGG 60.606 55.000 0.00 0.00 0.00 4.45
534 546 0.321564 CAGTGATTCAACGGCTGGGA 60.322 55.000 0.00 0.00 0.00 4.37
535 547 0.036010 AGTGATTCAACGGCTGGGAG 60.036 55.000 0.00 0.00 0.00 4.30
536 548 0.321653 GTGATTCAACGGCTGGGAGT 60.322 55.000 0.00 0.00 0.00 3.85
537 549 0.321564 TGATTCAACGGCTGGGAGTG 60.322 55.000 0.00 0.00 0.00 3.51
538 550 0.321653 GATTCAACGGCTGGGAGTGT 60.322 55.000 0.00 0.00 0.00 3.55
539 551 0.321653 ATTCAACGGCTGGGAGTGTC 60.322 55.000 0.00 0.00 0.00 3.67
540 552 1.691195 TTCAACGGCTGGGAGTGTCA 61.691 55.000 0.00 0.00 0.00 3.58
541 553 1.227823 CAACGGCTGGGAGTGTCAA 60.228 57.895 0.00 0.00 0.00 3.18
542 554 0.817634 CAACGGCTGGGAGTGTCAAA 60.818 55.000 0.00 0.00 0.00 2.69
543 555 0.106918 AACGGCTGGGAGTGTCAAAA 60.107 50.000 0.00 0.00 0.00 2.44
544 556 0.818040 ACGGCTGGGAGTGTCAAAAC 60.818 55.000 0.00 0.00 0.00 2.43
545 557 1.841663 CGGCTGGGAGTGTCAAAACG 61.842 60.000 0.00 0.00 0.00 3.60
546 558 1.282875 GCTGGGAGTGTCAAAACGC 59.717 57.895 0.00 0.00 36.09 4.84
548 560 0.588252 CTGGGAGTGTCAAAACGCTG 59.412 55.000 0.00 0.00 46.11 5.18
549 561 0.107410 TGGGAGTGTCAAAACGCTGT 60.107 50.000 0.00 0.00 46.11 4.40
550 562 0.307760 GGGAGTGTCAAAACGCTGTG 59.692 55.000 0.00 0.00 46.11 3.66
551 563 0.307760 GGAGTGTCAAAACGCTGTGG 59.692 55.000 0.00 0.00 46.11 4.17
552 564 0.307760 GAGTGTCAAAACGCTGTGGG 59.692 55.000 0.00 0.00 46.11 4.61
553 565 1.101049 AGTGTCAAAACGCTGTGGGG 61.101 55.000 0.00 0.00 44.47 4.96
554 566 1.826054 TGTCAAAACGCTGTGGGGG 60.826 57.895 0.00 0.00 0.00 5.40
555 567 2.909965 TCAAAACGCTGTGGGGGC 60.910 61.111 0.00 0.00 0.00 5.80
556 568 2.912025 CAAAACGCTGTGGGGGCT 60.912 61.111 0.00 0.00 0.00 5.19
557 569 2.597510 AAAACGCTGTGGGGGCTC 60.598 61.111 0.00 0.00 0.00 4.70
561 573 4.514577 CGCTGTGGGGGCTCGTAG 62.515 72.222 0.00 0.00 0.00 3.51
562 574 4.840005 GCTGTGGGGGCTCGTAGC 62.840 72.222 0.00 0.00 41.46 3.58
563 575 3.077556 CTGTGGGGGCTCGTAGCT 61.078 66.667 0.00 0.00 41.99 3.32
564 576 1.756950 CTGTGGGGGCTCGTAGCTA 60.757 63.158 6.78 0.00 41.99 3.32
565 577 1.739338 CTGTGGGGGCTCGTAGCTAG 61.739 65.000 0.00 0.00 41.99 3.42
566 578 2.838225 TGGGGGCTCGTAGCTAGC 60.838 66.667 6.62 6.62 41.99 3.42
567 579 2.522193 GGGGGCTCGTAGCTAGCT 60.522 66.667 23.12 23.12 41.99 3.32
568 580 2.731374 GGGGCTCGTAGCTAGCTG 59.269 66.667 27.68 11.72 41.99 4.24
569 581 1.828660 GGGGCTCGTAGCTAGCTGA 60.829 63.158 27.68 15.54 41.99 4.26
570 582 1.182385 GGGGCTCGTAGCTAGCTGAT 61.182 60.000 27.68 3.54 41.99 2.90
571 583 0.676736 GGGCTCGTAGCTAGCTGATT 59.323 55.000 27.68 3.12 41.99 2.57
572 584 1.604185 GGGCTCGTAGCTAGCTGATTG 60.604 57.143 27.68 15.00 41.99 2.67
573 585 1.604185 GGCTCGTAGCTAGCTGATTGG 60.604 57.143 27.68 13.60 41.99 3.16
574 586 1.338337 GCTCGTAGCTAGCTGATTGGA 59.662 52.381 27.68 14.54 38.45 3.53
575 587 2.606795 GCTCGTAGCTAGCTGATTGGAG 60.607 54.545 27.68 22.47 38.45 3.86
576 588 2.881513 CTCGTAGCTAGCTGATTGGAGA 59.118 50.000 27.68 13.31 0.00 3.71
577 589 2.619177 TCGTAGCTAGCTGATTGGAGAC 59.381 50.000 27.68 13.28 0.00 3.36
578 590 2.359214 CGTAGCTAGCTGATTGGAGACA 59.641 50.000 27.68 0.00 39.83 3.41
579 591 3.005261 CGTAGCTAGCTGATTGGAGACAT 59.995 47.826 27.68 0.00 42.32 3.06
580 592 3.472283 AGCTAGCTGATTGGAGACATG 57.528 47.619 18.57 0.00 42.32 3.21
622 634 1.377229 CCTTCTACCAAACGGCCCA 59.623 57.895 0.00 0.00 0.00 5.36
713 725 1.546589 TTACAACTGGGACGGCCGAT 61.547 55.000 35.90 16.95 39.14 4.18
755 767 1.377202 TGATTCAACGGCTGGGAGC 60.377 57.895 0.00 0.00 41.46 4.70
780 792 4.077184 CGCTGTGGGGGCTCGTAA 62.077 66.667 0.00 0.00 0.00 3.18
802 814 9.947669 CGTAAGTAGCTGAGTTATACTGTTTAT 57.052 33.333 0.00 0.00 30.35 1.40
840 852 2.851263 AACATTCTTCGGCCACAGTA 57.149 45.000 2.24 0.00 0.00 2.74
960 979 2.094390 CGTCGTCCCCTCTCATTTTGTA 60.094 50.000 0.00 0.00 0.00 2.41
1028 1047 3.793144 GCGGCCTGAGTCAAAGCG 61.793 66.667 0.00 5.81 0.00 4.68
1228 1250 2.097038 CGCTTGCTTCCTCCACTCG 61.097 63.158 0.00 0.00 0.00 4.18
1380 1413 1.682849 CCTGGTGGAATTCCGACCA 59.317 57.895 30.55 30.55 41.54 4.02
1699 1739 5.126545 ACTGTCGGTATATGCACAAACTAGA 59.873 40.000 0.00 0.00 0.00 2.43
1728 1768 0.657312 TGAAACTGCTGCACGACTTG 59.343 50.000 0.00 0.00 0.00 3.16
1855 1897 4.906792 GGCCAGCGCTCCTGCTAG 62.907 72.222 7.13 0.00 45.23 3.42
1856 1898 4.154347 GCCAGCGCTCCTGCTAGT 62.154 66.667 7.13 0.00 45.23 2.57
1857 1899 2.202851 CCAGCGCTCCTGCTAGTG 60.203 66.667 7.13 0.00 45.23 2.74
1858 1900 2.575993 CAGCGCTCCTGCTAGTGT 59.424 61.111 7.13 0.00 45.23 3.55
1859 1901 1.808799 CAGCGCTCCTGCTAGTGTG 60.809 63.158 7.13 0.00 45.23 3.82
1860 1902 1.979155 AGCGCTCCTGCTAGTGTGA 60.979 57.895 2.64 0.00 45.14 3.58
1861 1903 1.807573 GCGCTCCTGCTAGTGTGAC 60.808 63.158 0.00 0.00 36.97 3.67
1862 1904 1.886585 CGCTCCTGCTAGTGTGACT 59.113 57.895 0.00 0.00 36.97 3.41
1863 1905 1.095600 CGCTCCTGCTAGTGTGACTA 58.904 55.000 0.00 0.00 36.97 2.59
1864 1906 1.678627 CGCTCCTGCTAGTGTGACTAT 59.321 52.381 0.00 0.00 36.97 2.12
1865 1907 2.287308 CGCTCCTGCTAGTGTGACTATC 60.287 54.545 0.00 0.00 36.97 2.08
1866 1908 2.287308 GCTCCTGCTAGTGTGACTATCG 60.287 54.545 0.00 0.00 36.03 2.92
1867 1909 3.206964 CTCCTGCTAGTGTGACTATCGA 58.793 50.000 0.00 0.00 29.08 3.59
1868 1910 3.206964 TCCTGCTAGTGTGACTATCGAG 58.793 50.000 0.00 0.00 29.08 4.04
1869 1911 2.287308 CCTGCTAGTGTGACTATCGAGC 60.287 54.545 0.00 0.00 29.08 5.03
1870 1912 1.330829 TGCTAGTGTGACTATCGAGCG 59.669 52.381 0.00 0.00 33.74 5.03
1871 1913 1.334239 GCTAGTGTGACTATCGAGCGG 60.334 57.143 0.00 0.00 29.08 5.52
1872 1914 2.210961 CTAGTGTGACTATCGAGCGGA 58.789 52.381 0.00 0.00 29.08 5.54
1873 1915 1.681538 AGTGTGACTATCGAGCGGAT 58.318 50.000 0.00 0.00 39.25 4.18
1874 1916 2.025155 AGTGTGACTATCGAGCGGATT 58.975 47.619 0.00 0.00 36.55 3.01
2010 2109 9.371136 GTGATATGTGAAATTGAAGTCAGTAGA 57.629 33.333 0.00 0.00 0.00 2.59
2148 2247 8.897752 TGATTCGATGTAGATGTCCTATCTATG 58.102 37.037 0.00 0.00 33.70 2.23
2185 2284 6.037172 GCAAATATGTGATCCGTTTAGAGTGT 59.963 38.462 0.00 0.00 0.00 3.55
2660 2759 0.456221 AGAGCCGTGAGTATGTTCCG 59.544 55.000 0.00 0.00 0.00 4.30
2703 2802 4.943705 AGAGTCTGACAGTTGAAAAAGCAA 59.056 37.500 10.88 0.00 0.00 3.91
2911 3010 3.674997 TGCTCCCTTGAAGATGTGTTAC 58.325 45.455 0.00 0.00 0.00 2.50
2943 3042 6.525976 GCTGCTGTTCACAATCTCTTTAATTC 59.474 38.462 0.00 0.00 0.00 2.17
3095 3195 8.843262 GGTCTTGTTTTTAACTTATGGTAGTGT 58.157 33.333 0.00 0.00 0.00 3.55
3323 3423 5.869579 TCTAGATCTTTTGATATGGCCCAC 58.130 41.667 0.00 0.00 39.67 4.61
3374 3474 2.743636 ATGGTGAGTAGTGTCAACCG 57.256 50.000 0.00 0.00 32.70 4.44
3391 3491 7.327275 GTGTCAACCGTGCATAAATATTGAAAA 59.673 33.333 0.00 0.00 0.00 2.29
3392 3492 8.031864 TGTCAACCGTGCATAAATATTGAAAAT 58.968 29.630 0.00 0.00 0.00 1.82
3393 3493 9.509855 GTCAACCGTGCATAAATATTGAAAATA 57.490 29.630 0.00 0.00 0.00 1.40
3394 3494 9.509855 TCAACCGTGCATAAATATTGAAAATAC 57.490 29.630 0.00 0.00 0.00 1.89
3395 3495 9.515020 CAACCGTGCATAAATATTGAAAATACT 57.485 29.630 0.00 0.00 0.00 2.12
3397 3497 9.515020 ACCGTGCATAAATATTGAAAATACTTG 57.485 29.630 0.00 0.00 0.00 3.16
3398 3498 9.515020 CCGTGCATAAATATTGAAAATACTTGT 57.485 29.630 0.00 0.00 0.00 3.16
3694 3795 2.746904 TGCCATAACAAGAATGGTCGTG 59.253 45.455 4.18 0.00 44.87 4.35
3781 3882 5.432885 ACAAACACATGCTGTAAACTACC 57.567 39.130 0.00 0.00 30.51 3.18
3808 3909 4.702831 TGCACATCAACTTGAGTACTCAA 58.297 39.130 31.11 31.11 46.27 3.02
3846 3947 9.726438 AATAAAAATAATGATCTACTCCCTCCG 57.274 33.333 0.00 0.00 0.00 4.63
3847 3948 6.749036 AAAATAATGATCTACTCCCTCCGT 57.251 37.500 0.00 0.00 0.00 4.69
3848 3949 6.749036 AAATAATGATCTACTCCCTCCGTT 57.251 37.500 0.00 0.00 0.00 4.44
3849 3950 5.986501 ATAATGATCTACTCCCTCCGTTC 57.013 43.478 0.00 0.00 0.00 3.95
3850 3951 2.068834 TGATCTACTCCCTCCGTTCC 57.931 55.000 0.00 0.00 0.00 3.62
3851 3952 1.569548 TGATCTACTCCCTCCGTTCCT 59.430 52.381 0.00 0.00 0.00 3.36
3852 3953 2.781757 TGATCTACTCCCTCCGTTCCTA 59.218 50.000 0.00 0.00 0.00 2.94
3853 3954 3.203710 TGATCTACTCCCTCCGTTCCTAA 59.796 47.826 0.00 0.00 0.00 2.69
3854 3955 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
3855 3956 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
3856 3957 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
3857 3958 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
3858 3959 6.379579 TCTACTCCCTCCGTTCCTAAATATT 58.620 40.000 0.00 0.00 0.00 1.28
3859 3960 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3860 3961 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3861 3962 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3862 3963 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
3863 3964 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
3864 3965 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
3865 3966 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
3866 3967 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
3867 3968 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
3868 3969 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
3869 3970 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
3870 3971 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
3885 3986 9.996554 TGTCTTTCTAGATATTTCAACAAGTGA 57.003 29.630 0.00 0.00 31.86 3.41
3894 3995 9.302345 AGATATTTCAACAAGTGACTACATACG 57.698 33.333 0.00 0.00 35.39 3.06
3895 3996 9.297586 GATATTTCAACAAGTGACTACATACGA 57.702 33.333 0.00 0.00 35.39 3.43
3896 3997 7.956420 ATTTCAACAAGTGACTACATACGAA 57.044 32.000 0.00 0.00 35.39 3.85
3897 3998 7.402811 TTTCAACAAGTGACTACATACGAAG 57.597 36.000 0.00 0.00 35.39 3.79
3898 3999 4.921515 TCAACAAGTGACTACATACGAAGC 59.078 41.667 0.00 0.00 0.00 3.86
3899 4000 4.514781 ACAAGTGACTACATACGAAGCA 57.485 40.909 0.00 0.00 0.00 3.91
3900 4001 4.878439 ACAAGTGACTACATACGAAGCAA 58.122 39.130 0.00 0.00 0.00 3.91
3901 4002 5.294356 ACAAGTGACTACATACGAAGCAAA 58.706 37.500 0.00 0.00 0.00 3.68
3902 4003 5.756347 ACAAGTGACTACATACGAAGCAAAA 59.244 36.000 0.00 0.00 0.00 2.44
3903 4004 6.426937 ACAAGTGACTACATACGAAGCAAAAT 59.573 34.615 0.00 0.00 0.00 1.82
3904 4005 6.408858 AGTGACTACATACGAAGCAAAATG 57.591 37.500 0.00 0.00 0.00 2.32
3905 4006 6.163476 AGTGACTACATACGAAGCAAAATGA 58.837 36.000 0.00 0.00 0.00 2.57
3906 4007 6.311445 AGTGACTACATACGAAGCAAAATGAG 59.689 38.462 0.00 0.00 0.00 2.90
3907 4008 6.090898 GTGACTACATACGAAGCAAAATGAGT 59.909 38.462 0.00 0.00 0.00 3.41
3908 4009 6.090763 TGACTACATACGAAGCAAAATGAGTG 59.909 38.462 0.00 0.00 0.00 3.51
3909 4010 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
3910 4011 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
3911 4012 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
3912 4013 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
3913 4014 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
3914 4015 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
3915 4016 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
3916 4017 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
3917 4018 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
3930 4031 8.764524 AGTGAATCTACACTCTAAAATGTGTC 57.235 34.615 1.91 0.00 46.36 3.67
3931 4032 8.589338 AGTGAATCTACACTCTAAAATGTGTCT 58.411 33.333 1.91 0.00 46.36 3.41
3932 4033 9.856488 GTGAATCTACACTCTAAAATGTGTCTA 57.144 33.333 1.91 0.00 44.94 2.59
3933 4034 9.856488 TGAATCTACACTCTAAAATGTGTCTAC 57.144 33.333 1.91 0.00 44.94 2.59
3934 4035 9.856488 GAATCTACACTCTAAAATGTGTCTACA 57.144 33.333 1.91 0.00 44.94 2.74
3940 4041 9.587772 ACACTCTAAAATGTGTCTACATACATC 57.412 33.333 0.00 0.00 46.54 3.06
3941 4042 9.809096 CACTCTAAAATGTGTCTACATACATCT 57.191 33.333 0.00 0.00 46.54 2.90
3942 4043 9.809096 ACTCTAAAATGTGTCTACATACATCTG 57.191 33.333 0.00 0.00 46.54 2.90
3943 4044 9.809096 CTCTAAAATGTGTCTACATACATCTGT 57.191 33.333 0.00 0.00 46.54 3.41
3957 4058 4.778213 ACATCTGTATGTGGTAGCCATT 57.222 40.909 2.01 0.00 44.79 3.16
3958 4059 5.116084 ACATCTGTATGTGGTAGCCATTT 57.884 39.130 2.01 0.00 44.79 2.32
3959 4060 4.883585 ACATCTGTATGTGGTAGCCATTTG 59.116 41.667 2.01 0.00 44.79 2.32
3960 4061 4.835284 TCTGTATGTGGTAGCCATTTGA 57.165 40.909 2.01 0.00 35.28 2.69
3961 4062 5.172687 TCTGTATGTGGTAGCCATTTGAA 57.827 39.130 2.01 0.00 35.28 2.69
3962 4063 5.565509 TCTGTATGTGGTAGCCATTTGAAA 58.434 37.500 2.01 0.00 35.28 2.69
3963 4064 6.186957 TCTGTATGTGGTAGCCATTTGAAAT 58.813 36.000 2.01 0.00 35.28 2.17
3964 4065 6.095300 TCTGTATGTGGTAGCCATTTGAAATG 59.905 38.462 10.84 10.84 35.28 2.32
3965 4066 5.714333 TGTATGTGGTAGCCATTTGAAATGT 59.286 36.000 15.93 2.12 35.28 2.71
3966 4067 4.782019 TGTGGTAGCCATTTGAAATGTC 57.218 40.909 15.93 3.96 35.28 3.06
3967 4068 4.406456 TGTGGTAGCCATTTGAAATGTCT 58.594 39.130 15.93 11.47 35.28 3.41
3968 4069 5.565509 TGTGGTAGCCATTTGAAATGTCTA 58.434 37.500 15.93 10.48 35.28 2.59
3969 4070 5.647658 TGTGGTAGCCATTTGAAATGTCTAG 59.352 40.000 15.93 2.82 35.28 2.43
3970 4071 5.880332 GTGGTAGCCATTTGAAATGTCTAGA 59.120 40.000 15.93 1.26 35.28 2.43
3971 4072 6.374333 GTGGTAGCCATTTGAAATGTCTAGAA 59.626 38.462 15.93 2.55 35.28 2.10
3972 4073 6.945435 TGGTAGCCATTTGAAATGTCTAGAAA 59.055 34.615 15.93 0.00 0.00 2.52
3973 4074 7.121168 TGGTAGCCATTTGAAATGTCTAGAAAG 59.879 37.037 15.93 0.50 0.00 2.62
3974 4075 7.336931 GGTAGCCATTTGAAATGTCTAGAAAGA 59.663 37.037 15.93 0.00 0.00 2.52
3991 4092 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3992 4093 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
3993 4094 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
3994 4095 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
3995 4096 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3996 4097 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3997 4098 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
3998 4099 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
3999 4100 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
4552 4654 2.824936 TGTTGTGGTATCAATGGGCAAG 59.175 45.455 0.00 0.00 0.00 4.01
4561 4663 7.014230 GTGGTATCAATGGGCAAGTAATATGTT 59.986 37.037 0.00 0.00 0.00 2.71
4562 4664 7.563188 TGGTATCAATGGGCAAGTAATATGTTT 59.437 33.333 0.00 0.00 0.00 2.83
4563 4665 8.421002 GGTATCAATGGGCAAGTAATATGTTTT 58.579 33.333 0.00 0.00 0.00 2.43
4564 4666 9.816354 GTATCAATGGGCAAGTAATATGTTTTT 57.184 29.630 0.00 0.00 0.00 1.94
4748 4881 5.241506 GTGATCTCTTCTCTCCTGGTGATAG 59.758 48.000 0.00 1.10 0.00 2.08
4917 5053 1.271597 GGTGCTGAACAAGGTCAGGAT 60.272 52.381 16.22 0.00 46.09 3.24
5036 5172 1.211190 GGCAGCAAAGAAGGAAGCG 59.789 57.895 0.00 0.00 0.00 4.68
5053 5189 4.338682 GGAAGCGGTTCATAGACTCTCTTA 59.661 45.833 26.94 0.00 33.93 2.10
5112 5248 3.043713 CGCGTTGGCTGCAGAGAA 61.044 61.111 20.43 5.75 36.88 2.87
5113 5249 2.866028 GCGTTGGCTGCAGAGAAG 59.134 61.111 20.43 5.46 35.83 2.85
5114 5250 2.684843 GCGTTGGCTGCAGAGAAGG 61.685 63.158 20.43 14.75 35.83 3.46
5115 5251 1.004560 CGTTGGCTGCAGAGAAGGA 60.005 57.895 20.43 0.00 0.00 3.36
5116 5252 1.294659 CGTTGGCTGCAGAGAAGGAC 61.295 60.000 20.43 5.52 0.00 3.85
5159 5295 4.441079 CCTGCATCATGATTTTGGACTTCC 60.441 45.833 5.16 0.00 0.00 3.46
5285 5423 9.679661 TGGTATAGTTGACAAACATTCATATGT 57.320 29.630 1.90 0.00 46.85 2.29
5286 5424 9.935682 GGTATAGTTGACAAACATTCATATGTG 57.064 33.333 1.90 0.00 44.14 3.21
5287 5425 9.438291 GTATAGTTGACAAACATTCATATGTGC 57.562 33.333 1.90 0.00 44.14 4.57
5288 5426 6.330004 AGTTGACAAACATTCATATGTGCA 57.670 33.333 1.90 0.00 44.14 4.57
5289 5427 6.927416 AGTTGACAAACATTCATATGTGCAT 58.073 32.000 1.90 0.00 44.14 3.96
5290 5428 6.809689 AGTTGACAAACATTCATATGTGCATG 59.190 34.615 1.90 0.72 44.14 4.06
5390 5528 6.127730 GGCAGTTAACCAATATTGTGCTTAGT 60.128 38.462 19.70 6.67 0.00 2.24
5393 5531 9.128107 CAGTTAACCAATATTGTGCTTAGTTTG 57.872 33.333 14.25 2.81 0.00 2.93
5413 5551 7.719483 AGTTTGCATTTCATATATCTTGTGGG 58.281 34.615 0.00 0.00 0.00 4.61
5414 5552 6.653526 TTGCATTTCATATATCTTGTGGGG 57.346 37.500 0.00 0.00 0.00 4.96
5447 5585 5.992217 GGCAGTAATCCTTAATGTACTGGAG 59.008 44.000 10.69 0.00 42.36 3.86
5459 5597 1.801178 GTACTGGAGTGCAAGCTGTTC 59.199 52.381 0.00 0.00 0.00 3.18
5469 5607 2.233431 TGCAAGCTGTTCAGTTTGGTTT 59.767 40.909 23.24 0.00 31.92 3.27
5470 5608 3.261580 GCAAGCTGTTCAGTTTGGTTTT 58.738 40.909 23.24 0.00 31.92 2.43
5471 5609 3.306973 GCAAGCTGTTCAGTTTGGTTTTC 59.693 43.478 23.24 8.87 31.92 2.29
5472 5610 3.420839 AGCTGTTCAGTTTGGTTTTCG 57.579 42.857 1.78 0.00 0.00 3.46
5494 5643 4.435518 CGACAATATTTTGACAGTCCCGTG 60.436 45.833 2.69 0.00 36.64 4.94
5514 5663 4.688879 CGTGAAAGTCCATGTACAGCTTTA 59.311 41.667 0.33 0.00 30.64 1.85
5523 5672 5.880332 TCCATGTACAGCTTTATCCAAAGAC 59.120 40.000 0.33 0.00 43.32 3.01
5526 5675 6.741992 TGTACAGCTTTATCCAAAGACATG 57.258 37.500 0.00 0.00 43.32 3.21
5568 5717 2.714250 TGTTTACAATGTGGAGGAGGGT 59.286 45.455 0.00 0.00 0.00 4.34
5571 5720 1.379916 CAATGTGGAGGAGGGTGCA 59.620 57.895 0.00 0.00 0.00 4.57
5572 5721 0.962356 CAATGTGGAGGAGGGTGCAC 60.962 60.000 8.80 8.80 39.13 4.57
5574 5723 1.557269 ATGTGGAGGAGGGTGCACTC 61.557 60.000 17.98 14.03 39.39 3.51
5580 5729 1.374758 GGAGGGTGCACTCTCGTTG 60.375 63.158 34.51 0.00 37.63 4.10
5592 5741 0.603569 TCTCGTTGTTCTCCCTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
5595 5744 1.416401 TCGTTGTTCTCCCTGCTCTTT 59.584 47.619 0.00 0.00 0.00 2.52
5603 5752 5.045651 TGTTCTCCCTGCTCTTTCATTGATA 60.046 40.000 0.00 0.00 0.00 2.15
5604 5753 5.287674 TCTCCCTGCTCTTTCATTGATAG 57.712 43.478 0.00 0.00 0.00 2.08
5605 5754 4.964897 TCTCCCTGCTCTTTCATTGATAGA 59.035 41.667 6.64 6.64 0.00 1.98
5617 5767 5.713792 TCATTGATAGACGATCTTCCCTC 57.286 43.478 0.00 0.00 35.37 4.30
5619 5769 1.880675 TGATAGACGATCTTCCCTCGC 59.119 52.381 0.00 0.00 39.71 5.03
5628 5778 1.597027 CTTCCCTCGCAACAACGGT 60.597 57.895 0.00 0.00 0.00 4.83
5629 5779 1.153127 TTCCCTCGCAACAACGGTT 60.153 52.632 0.00 0.00 37.87 4.44
5630 5780 0.748729 TTCCCTCGCAACAACGGTTT 60.749 50.000 0.00 0.00 34.21 3.27
5631 5781 1.008995 CCCTCGCAACAACGGTTTG 60.009 57.895 0.00 0.00 34.21 2.93
5632 5782 1.008995 CCTCGCAACAACGGTTTGG 60.009 57.895 0.00 0.00 37.00 3.28
5633 5783 1.657181 CTCGCAACAACGGTTTGGC 60.657 57.895 0.00 0.00 37.00 4.52
5634 5784 2.656973 CGCAACAACGGTTTGGCC 60.657 61.111 0.00 0.00 37.00 5.36
5635 5785 2.811799 GCAACAACGGTTTGGCCT 59.188 55.556 3.32 0.00 37.00 5.19
5636 5786 1.142965 GCAACAACGGTTTGGCCTT 59.857 52.632 3.32 0.00 37.00 4.35
5637 5787 0.874175 GCAACAACGGTTTGGCCTTC 60.874 55.000 3.32 0.00 37.00 3.46
5638 5788 0.457851 CAACAACGGTTTGGCCTTCA 59.542 50.000 3.32 0.00 37.00 3.02
5639 5789 0.744281 AACAACGGTTTGGCCTTCAG 59.256 50.000 3.32 0.00 37.00 3.02
5640 5790 1.007387 CAACGGTTTGGCCTTCAGC 60.007 57.895 3.32 0.00 42.60 4.26
5641 5791 1.152756 AACGGTTTGGCCTTCAGCT 60.153 52.632 3.32 0.00 43.05 4.24
5642 5792 0.755327 AACGGTTTGGCCTTCAGCTT 60.755 50.000 3.32 0.00 43.05 3.74
5643 5793 0.109723 ACGGTTTGGCCTTCAGCTTA 59.890 50.000 3.32 0.00 43.05 3.09
5644 5794 0.521735 CGGTTTGGCCTTCAGCTTAC 59.478 55.000 3.32 0.00 43.05 2.34
5645 5795 1.616159 GGTTTGGCCTTCAGCTTACA 58.384 50.000 3.32 0.00 43.05 2.41
5646 5796 1.960689 GGTTTGGCCTTCAGCTTACAA 59.039 47.619 3.32 0.00 43.05 2.41
5647 5797 2.288213 GGTTTGGCCTTCAGCTTACAAC 60.288 50.000 3.32 0.00 43.05 3.32
5648 5798 2.356665 TTGGCCTTCAGCTTACAACA 57.643 45.000 3.32 0.00 43.05 3.33
5649 5799 1.604604 TGGCCTTCAGCTTACAACAC 58.395 50.000 3.32 0.00 43.05 3.32
5650 5800 0.517316 GGCCTTCAGCTTACAACACG 59.483 55.000 0.00 0.00 43.05 4.49
5673 5823 0.471617 AAGGCTATGGCGCAGATCTT 59.528 50.000 10.83 3.27 39.81 2.40
5684 5854 1.741401 CAGATCTTGCGTCGGCCAA 60.741 57.895 2.24 0.00 38.85 4.52
5749 5920 3.062323 GCAGCTGCACTATGTTTCATC 57.938 47.619 33.36 0.00 41.59 2.92
5758 5929 7.742089 GCTGCACTATGTTTCATCGATTAATAC 59.258 37.037 0.00 0.00 0.00 1.89
5761 5932 7.945178 GCACTATGTTTCATCGATTAATACGAC 59.055 37.037 10.71 0.00 42.37 4.34
5822 5998 7.441017 AGCTACAAGCATATTGAAAACCAAAA 58.559 30.769 1.22 0.00 45.56 2.44
5833 6009 7.862512 ATTGAAAACCAAAAGAAATTGCAGA 57.137 28.000 0.00 0.00 38.43 4.26
5854 6030 5.471456 CAGAGCTGGCTAAAAGAAAAGAAGA 59.529 40.000 0.00 0.00 0.00 2.87
5983 6159 2.613595 CCTCGCATCGAAATCAATCCAA 59.386 45.455 0.00 0.00 34.74 3.53
5996 6190 8.611757 CGAAATCAATCCAACATATCAACACTA 58.388 33.333 0.00 0.00 0.00 2.74
5999 6193 7.194112 TCAATCCAACATATCAACACTAGGA 57.806 36.000 0.00 0.00 0.00 2.94
6005 6199 6.316390 CCAACATATCAACACTAGGAAGGAAC 59.684 42.308 0.00 0.00 0.00 3.62
6008 6202 7.106239 ACATATCAACACTAGGAAGGAACAAG 58.894 38.462 0.00 0.00 0.00 3.16
6012 6206 5.012664 TCAACACTAGGAAGGAACAAGCATA 59.987 40.000 0.00 0.00 0.00 3.14
6037 6234 3.619233 AAACAACGGAAAACTGGATCG 57.381 42.857 0.00 0.00 0.00 3.69
6108 6305 2.429930 CCTCCGGCACAGGTTTCA 59.570 61.111 0.00 0.00 0.00 2.69
6126 6323 1.077787 ATTCCTCATTGCCGGCGAA 60.078 52.632 22.97 17.43 0.00 4.70
6129 6326 2.331893 CCTCATTGCCGGCGAACAA 61.332 57.895 22.97 10.37 0.00 2.83
6165 6374 1.145803 GGGGAAAGACTCACGAAACG 58.854 55.000 0.00 0.00 0.00 3.60
6211 6818 5.107298 TGTTTCAAAAACTCGCAACAAAAGG 60.107 36.000 4.40 0.00 0.00 3.11
6280 7180 1.277580 CCAATGGAGCAGGAGGGAGT 61.278 60.000 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.803451 CAGCTACTCATTCGTCCTCAC 58.197 52.381 0.00 0.00 0.00 3.51
211 223 0.527600 GCGTCGATGCCATGTACTCA 60.528 55.000 19.11 0.00 0.00 3.41
212 224 1.540607 CGCGTCGATGCCATGTACTC 61.541 60.000 23.36 0.00 0.00 2.59
213 225 1.588932 CGCGTCGATGCCATGTACT 60.589 57.895 23.36 0.00 0.00 2.73
214 226 1.540607 CTCGCGTCGATGCCATGTAC 61.541 60.000 23.36 0.00 34.61 2.90
215 227 1.299089 CTCGCGTCGATGCCATGTA 60.299 57.895 23.36 3.87 34.61 2.29
221 233 3.487202 TTTGCCTCGCGTCGATGC 61.487 61.111 19.84 19.84 45.02 3.91
222 234 1.896339 TTGTTTGCCTCGCGTCGATG 61.896 55.000 5.77 0.00 34.61 3.84
223 235 1.626654 CTTGTTTGCCTCGCGTCGAT 61.627 55.000 5.77 0.00 34.61 3.59
224 236 2.279584 TTGTTTGCCTCGCGTCGA 60.280 55.556 5.77 2.20 0.00 4.20
225 237 2.170985 CTTGTTTGCCTCGCGTCG 59.829 61.111 5.77 0.00 0.00 5.12
226 238 1.493311 CTCTTGTTTGCCTCGCGTC 59.507 57.895 5.77 0.00 0.00 5.19
227 239 1.961277 CCTCTTGTTTGCCTCGCGT 60.961 57.895 5.77 0.00 0.00 6.01
228 240 0.669318 TACCTCTTGTTTGCCTCGCG 60.669 55.000 0.00 0.00 0.00 5.87
229 241 1.079503 CTACCTCTTGTTTGCCTCGC 58.920 55.000 0.00 0.00 0.00 5.03
324 336 4.637483 TCCTTGAGCAGTTTCACAAAAG 57.363 40.909 0.00 0.00 0.00 2.27
341 353 3.525199 AGCATGTCTCCAAACCTATCCTT 59.475 43.478 0.00 0.00 0.00 3.36
362 374 1.666700 CACGAGGTCTCTCTAACGGAG 59.333 57.143 0.00 0.00 43.12 4.63
363 375 1.678123 CCACGAGGTCTCTCTAACGGA 60.678 57.143 0.00 0.00 37.86 4.69
364 376 0.733729 CCACGAGGTCTCTCTAACGG 59.266 60.000 0.00 0.00 37.86 4.44
365 377 0.733729 CCCACGAGGTCTCTCTAACG 59.266 60.000 0.00 0.00 37.86 3.18
366 378 0.456628 GCCCACGAGGTCTCTCTAAC 59.543 60.000 0.00 0.00 37.86 2.34
367 379 0.683504 GGCCCACGAGGTCTCTCTAA 60.684 60.000 0.00 0.00 37.23 2.10
368 380 1.076923 GGCCCACGAGGTCTCTCTA 60.077 63.158 0.00 0.00 37.23 2.43
369 381 2.363147 GGCCCACGAGGTCTCTCT 60.363 66.667 0.00 0.00 37.23 3.10
374 386 0.389757 GATAGAAGGCCCACGAGGTC 59.610 60.000 0.00 0.00 42.50 3.85
375 387 0.325296 TGATAGAAGGCCCACGAGGT 60.325 55.000 0.00 0.00 38.26 3.85
376 388 0.830648 TTGATAGAAGGCCCACGAGG 59.169 55.000 0.00 0.00 39.47 4.63
377 389 2.280628 GTTTGATAGAAGGCCCACGAG 58.719 52.381 0.00 0.00 0.00 4.18
378 390 1.404986 CGTTTGATAGAAGGCCCACGA 60.405 52.381 0.00 0.00 0.00 4.35
379 391 1.006832 CGTTTGATAGAAGGCCCACG 58.993 55.000 0.00 0.00 0.00 4.94
380 392 1.379527 CCGTTTGATAGAAGGCCCAC 58.620 55.000 0.00 0.00 0.00 4.61
381 393 0.393808 GCCGTTTGATAGAAGGCCCA 60.394 55.000 0.00 0.00 41.81 5.36
382 394 2.405143 GCCGTTTGATAGAAGGCCC 58.595 57.895 0.00 0.00 41.81 5.80
384 396 0.393808 TGGGCCGTTTGATAGAAGGC 60.394 55.000 0.00 0.00 46.51 4.35
385 397 2.122783 TTGGGCCGTTTGATAGAAGG 57.877 50.000 0.00 0.00 0.00 3.46
386 398 3.242739 CGAATTGGGCCGTTTGATAGAAG 60.243 47.826 0.00 0.00 0.00 2.85
387 399 2.680841 CGAATTGGGCCGTTTGATAGAA 59.319 45.455 0.00 0.00 0.00 2.10
388 400 2.285083 CGAATTGGGCCGTTTGATAGA 58.715 47.619 0.00 0.00 0.00 1.98
389 401 1.333619 CCGAATTGGGCCGTTTGATAG 59.666 52.381 9.60 0.00 0.00 2.08
390 402 1.384525 CCGAATTGGGCCGTTTGATA 58.615 50.000 9.60 0.00 0.00 2.15
391 403 2.188912 CCGAATTGGGCCGTTTGAT 58.811 52.632 9.60 0.00 0.00 2.57
392 404 3.674906 CCGAATTGGGCCGTTTGA 58.325 55.556 9.60 0.00 0.00 2.69
401 413 1.268539 GCGCTAATTGTCCCGAATTGG 60.269 52.381 0.00 0.00 37.55 3.16
402 414 1.400142 TGCGCTAATTGTCCCGAATTG 59.600 47.619 9.73 0.00 0.00 2.32
403 415 1.745232 TGCGCTAATTGTCCCGAATT 58.255 45.000 9.73 0.00 0.00 2.17
404 416 1.400494 GTTGCGCTAATTGTCCCGAAT 59.600 47.619 9.73 0.00 0.00 3.34
405 417 0.800012 GTTGCGCTAATTGTCCCGAA 59.200 50.000 9.73 0.00 0.00 4.30
406 418 0.036765 AGTTGCGCTAATTGTCCCGA 60.037 50.000 9.73 0.00 0.00 5.14
407 419 0.373716 GAGTTGCGCTAATTGTCCCG 59.626 55.000 9.73 0.00 0.00 5.14
408 420 0.373716 CGAGTTGCGCTAATTGTCCC 59.626 55.000 9.73 0.00 0.00 4.46
409 421 1.076332 ACGAGTTGCGCTAATTGTCC 58.924 50.000 9.73 0.00 46.04 4.02
410 422 2.412089 AGAACGAGTTGCGCTAATTGTC 59.588 45.455 12.35 6.78 46.04 3.18
411 423 2.412089 GAGAACGAGTTGCGCTAATTGT 59.588 45.455 9.73 7.81 46.04 2.71
412 424 2.222819 GGAGAACGAGTTGCGCTAATTG 60.223 50.000 9.73 7.03 46.04 2.32
413 425 2.000447 GGAGAACGAGTTGCGCTAATT 59.000 47.619 9.73 0.00 46.04 1.40
414 426 1.641577 GGAGAACGAGTTGCGCTAAT 58.358 50.000 9.73 0.00 46.04 1.73
415 427 3.117589 GGAGAACGAGTTGCGCTAA 57.882 52.632 9.73 0.00 46.04 3.09
416 428 4.883026 GGAGAACGAGTTGCGCTA 57.117 55.556 9.73 0.00 46.04 4.26
426 438 2.507992 CTGCTGCTCCGGAGAACG 60.508 66.667 35.69 21.20 43.80 3.95
427 439 2.817396 GCTGCTGCTCCGGAGAAC 60.817 66.667 35.69 21.92 36.03 3.01
428 440 4.087892 GGCTGCTGCTCCGGAGAA 62.088 66.667 35.69 25.22 39.59 2.87
433 445 3.907260 TTTCTGGGCTGCTGCTCCG 62.907 63.158 13.44 6.78 39.40 4.63
434 446 1.604593 TTTTCTGGGCTGCTGCTCC 60.605 57.895 13.44 13.60 39.40 4.70
435 447 1.583477 GTTTTCTGGGCTGCTGCTC 59.417 57.895 15.64 12.43 40.87 4.26
436 448 2.263741 CGTTTTCTGGGCTGCTGCT 61.264 57.895 15.64 0.00 39.59 4.24
437 449 2.256461 CGTTTTCTGGGCTGCTGC 59.744 61.111 7.10 7.10 38.76 5.25
438 450 1.898574 ACCGTTTTCTGGGCTGCTG 60.899 57.895 0.00 0.00 0.00 4.41
439 451 1.898574 CACCGTTTTCTGGGCTGCT 60.899 57.895 0.00 0.00 0.00 4.24
440 452 2.644992 CACCGTTTTCTGGGCTGC 59.355 61.111 0.00 0.00 0.00 5.25
441 453 2.644992 GCACCGTTTTCTGGGCTG 59.355 61.111 0.00 0.00 0.00 4.85
442 454 2.597510 GGCACCGTTTTCTGGGCT 60.598 61.111 0.00 0.00 0.00 5.19
443 455 1.744320 AAAGGCACCGTTTTCTGGGC 61.744 55.000 0.00 0.00 0.00 5.36
444 456 0.313987 GAAAGGCACCGTTTTCTGGG 59.686 55.000 0.00 0.00 32.06 4.45
445 457 1.001378 CTGAAAGGCACCGTTTTCTGG 60.001 52.381 3.84 0.00 35.02 3.86
446 458 1.600413 GCTGAAAGGCACCGTTTTCTG 60.600 52.381 3.84 4.33 35.02 3.02
447 459 0.668535 GCTGAAAGGCACCGTTTTCT 59.331 50.000 3.84 0.00 35.02 2.52
448 460 0.383949 TGCTGAAAGGCACCGTTTTC 59.616 50.000 0.00 0.00 37.29 2.29
449 461 0.385390 CTGCTGAAAGGCACCGTTTT 59.615 50.000 0.00 0.00 37.29 2.43
450 462 0.751643 ACTGCTGAAAGGCACCGTTT 60.752 50.000 0.00 0.00 37.29 3.60
451 463 1.152963 ACTGCTGAAAGGCACCGTT 60.153 52.632 0.00 0.00 37.29 4.44
452 464 1.598130 GACTGCTGAAAGGCACCGT 60.598 57.895 0.00 0.00 37.29 4.83
453 465 1.572085 CTGACTGCTGAAAGGCACCG 61.572 60.000 0.00 0.00 37.29 4.94
454 466 1.860484 GCTGACTGCTGAAAGGCACC 61.860 60.000 0.00 0.00 37.29 5.01
455 467 1.578423 GCTGACTGCTGAAAGGCAC 59.422 57.895 0.00 0.00 37.29 5.01
456 468 1.962822 CGCTGACTGCTGAAAGGCA 60.963 57.895 0.00 0.00 40.11 4.75
457 469 1.510480 AACGCTGACTGCTGAAAGGC 61.510 55.000 0.00 0.00 40.11 4.35
458 470 1.461127 GTAACGCTGACTGCTGAAAGG 59.539 52.381 0.00 0.00 40.11 3.11
459 471 2.135139 TGTAACGCTGACTGCTGAAAG 58.865 47.619 0.00 0.00 40.11 2.62
460 472 2.232756 TGTAACGCTGACTGCTGAAA 57.767 45.000 0.00 0.00 40.11 2.69
461 473 1.864711 GTTGTAACGCTGACTGCTGAA 59.135 47.619 0.00 0.00 40.11 3.02
462 474 1.068588 AGTTGTAACGCTGACTGCTGA 59.931 47.619 0.00 0.00 40.11 4.26
463 475 1.193203 CAGTTGTAACGCTGACTGCTG 59.807 52.381 2.66 0.00 40.11 4.41
464 476 1.502231 CAGTTGTAACGCTGACTGCT 58.498 50.000 2.66 0.00 40.11 4.24
465 477 0.512952 CCAGTTGTAACGCTGACTGC 59.487 55.000 0.00 0.00 38.48 4.40
466 478 1.148310 CCCAGTTGTAACGCTGACTG 58.852 55.000 0.00 0.00 39.29 3.51
467 479 1.045407 TCCCAGTTGTAACGCTGACT 58.955 50.000 0.00 0.00 34.87 3.41
468 480 1.145803 GTCCCAGTTGTAACGCTGAC 58.854 55.000 0.00 0.00 34.87 3.51
469 481 0.319211 CGTCCCAGTTGTAACGCTGA 60.319 55.000 0.00 0.00 34.87 4.26
470 482 1.289109 CCGTCCCAGTTGTAACGCTG 61.289 60.000 0.00 0.00 33.95 5.18
471 483 1.005394 CCGTCCCAGTTGTAACGCT 60.005 57.895 0.00 0.00 33.95 5.07
472 484 2.674084 GCCGTCCCAGTTGTAACGC 61.674 63.158 0.00 0.00 33.95 4.84
473 485 2.030958 GGCCGTCCCAGTTGTAACG 61.031 63.158 0.00 0.00 35.01 3.18
474 486 2.030958 CGGCCGTCCCAGTTGTAAC 61.031 63.158 19.50 0.00 0.00 2.50
475 487 1.546589 ATCGGCCGTCCCAGTTGTAA 61.547 55.000 27.15 0.03 0.00 2.41
476 488 1.952102 GATCGGCCGTCCCAGTTGTA 61.952 60.000 27.15 0.67 0.00 2.41
477 489 3.310860 GATCGGCCGTCCCAGTTGT 62.311 63.158 27.15 0.78 0.00 3.32
478 490 2.511600 GATCGGCCGTCCCAGTTG 60.512 66.667 27.15 0.00 0.00 3.16
479 491 2.119484 TTTGATCGGCCGTCCCAGTT 62.119 55.000 27.15 2.13 0.00 3.16
480 492 1.910580 ATTTGATCGGCCGTCCCAGT 61.911 55.000 27.15 10.83 0.00 4.00
481 493 1.153168 ATTTGATCGGCCGTCCCAG 60.153 57.895 27.15 0.00 0.00 4.45
482 494 1.153249 GATTTGATCGGCCGTCCCA 60.153 57.895 27.15 18.05 0.00 4.37
483 495 0.463833 AAGATTTGATCGGCCGTCCC 60.464 55.000 27.15 15.56 0.00 4.46
484 496 0.657840 CAAGATTTGATCGGCCGTCC 59.342 55.000 27.15 18.18 0.00 4.79
485 497 1.062587 CACAAGATTTGATCGGCCGTC 59.937 52.381 27.15 21.38 0.00 4.79
486 498 1.086696 CACAAGATTTGATCGGCCGT 58.913 50.000 27.15 12.96 0.00 5.68
487 499 0.248215 GCACAAGATTTGATCGGCCG 60.248 55.000 22.12 22.12 0.00 6.13
488 500 0.248215 CGCACAAGATTTGATCGGCC 60.248 55.000 0.00 0.00 0.00 6.13
489 501 0.447801 ACGCACAAGATTTGATCGGC 59.552 50.000 0.00 0.00 34.91 5.54
490 502 3.186909 TCTACGCACAAGATTTGATCGG 58.813 45.455 0.00 0.00 34.91 4.18
491 503 4.504097 TCATCTACGCACAAGATTTGATCG 59.496 41.667 0.00 1.78 31.22 3.69
492 504 5.291858 TGTCATCTACGCACAAGATTTGATC 59.708 40.000 0.00 0.00 31.22 2.92
493 505 5.178061 TGTCATCTACGCACAAGATTTGAT 58.822 37.500 0.00 0.00 31.22 2.57
494 506 4.565022 TGTCATCTACGCACAAGATTTGA 58.435 39.130 0.00 0.00 31.22 2.69
495 507 4.389992 ACTGTCATCTACGCACAAGATTTG 59.610 41.667 0.00 0.00 31.22 2.32
496 508 4.389992 CACTGTCATCTACGCACAAGATTT 59.610 41.667 0.00 0.00 31.22 2.17
497 509 3.928992 CACTGTCATCTACGCACAAGATT 59.071 43.478 0.00 0.00 31.22 2.40
498 510 3.193479 TCACTGTCATCTACGCACAAGAT 59.807 43.478 0.00 0.00 33.94 2.40
499 511 2.556622 TCACTGTCATCTACGCACAAGA 59.443 45.455 0.00 0.00 0.00 3.02
500 512 2.946564 TCACTGTCATCTACGCACAAG 58.053 47.619 0.00 0.00 0.00 3.16
501 513 3.592898 ATCACTGTCATCTACGCACAA 57.407 42.857 0.00 0.00 0.00 3.33
502 514 3.056891 TGAATCACTGTCATCTACGCACA 60.057 43.478 0.00 0.00 0.00 4.57
503 515 3.511699 TGAATCACTGTCATCTACGCAC 58.488 45.455 0.00 0.00 0.00 5.34
504 516 3.866883 TGAATCACTGTCATCTACGCA 57.133 42.857 0.00 0.00 0.00 5.24
505 517 3.000674 CGTTGAATCACTGTCATCTACGC 60.001 47.826 7.58 0.00 35.17 4.42
506 518 3.547868 CCGTTGAATCACTGTCATCTACG 59.452 47.826 11.25 11.25 39.53 3.51
507 519 3.307242 GCCGTTGAATCACTGTCATCTAC 59.693 47.826 0.00 0.00 0.00 2.59
508 520 3.195610 AGCCGTTGAATCACTGTCATCTA 59.804 43.478 0.00 0.00 0.00 1.98
509 521 2.027745 AGCCGTTGAATCACTGTCATCT 60.028 45.455 0.00 0.00 0.00 2.90
510 522 2.094894 CAGCCGTTGAATCACTGTCATC 59.905 50.000 0.00 0.00 0.00 2.92
511 523 2.079158 CAGCCGTTGAATCACTGTCAT 58.921 47.619 0.00 0.00 0.00 3.06
512 524 1.511850 CAGCCGTTGAATCACTGTCA 58.488 50.000 0.00 0.00 0.00 3.58
513 525 0.798776 CCAGCCGTTGAATCACTGTC 59.201 55.000 0.00 0.00 0.00 3.51
514 526 0.606401 CCCAGCCGTTGAATCACTGT 60.606 55.000 0.00 0.00 0.00 3.55
515 527 0.321564 TCCCAGCCGTTGAATCACTG 60.322 55.000 0.00 0.00 0.00 3.66
516 528 0.036010 CTCCCAGCCGTTGAATCACT 60.036 55.000 0.00 0.00 0.00 3.41
517 529 0.321653 ACTCCCAGCCGTTGAATCAC 60.322 55.000 0.00 0.00 0.00 3.06
518 530 0.321564 CACTCCCAGCCGTTGAATCA 60.322 55.000 0.00 0.00 0.00 2.57
519 531 0.321653 ACACTCCCAGCCGTTGAATC 60.322 55.000 0.00 0.00 0.00 2.52
520 532 0.321653 GACACTCCCAGCCGTTGAAT 60.322 55.000 0.00 0.00 0.00 2.57
521 533 1.070786 GACACTCCCAGCCGTTGAA 59.929 57.895 0.00 0.00 0.00 2.69
522 534 1.691195 TTGACACTCCCAGCCGTTGA 61.691 55.000 0.00 0.00 0.00 3.18
523 535 0.817634 TTTGACACTCCCAGCCGTTG 60.818 55.000 0.00 0.00 0.00 4.10
524 536 0.106918 TTTTGACACTCCCAGCCGTT 60.107 50.000 0.00 0.00 0.00 4.44
525 537 0.818040 GTTTTGACACTCCCAGCCGT 60.818 55.000 0.00 0.00 0.00 5.68
526 538 1.841663 CGTTTTGACACTCCCAGCCG 61.842 60.000 0.00 0.00 0.00 5.52
527 539 1.949257 CGTTTTGACACTCCCAGCC 59.051 57.895 0.00 0.00 0.00 4.85
528 540 1.166531 AGCGTTTTGACACTCCCAGC 61.167 55.000 0.00 0.00 0.00 4.85
529 541 0.588252 CAGCGTTTTGACACTCCCAG 59.412 55.000 0.00 0.00 0.00 4.45
530 542 0.107410 ACAGCGTTTTGACACTCCCA 60.107 50.000 0.00 0.00 0.00 4.37
531 543 0.307760 CACAGCGTTTTGACACTCCC 59.692 55.000 0.00 0.00 0.00 4.30
532 544 0.307760 CCACAGCGTTTTGACACTCC 59.692 55.000 0.00 0.00 0.00 3.85
533 545 0.307760 CCCACAGCGTTTTGACACTC 59.692 55.000 0.00 0.00 0.00 3.51
534 546 1.101049 CCCCACAGCGTTTTGACACT 61.101 55.000 0.00 0.00 0.00 3.55
535 547 1.358759 CCCCACAGCGTTTTGACAC 59.641 57.895 0.00 0.00 0.00 3.67
536 548 1.826054 CCCCCACAGCGTTTTGACA 60.826 57.895 0.00 0.00 0.00 3.58
537 549 3.039134 CCCCCACAGCGTTTTGAC 58.961 61.111 0.00 0.00 0.00 3.18
538 550 2.909965 GCCCCCACAGCGTTTTGA 60.910 61.111 0.00 0.00 0.00 2.69
539 551 2.912025 AGCCCCCACAGCGTTTTG 60.912 61.111 0.00 0.00 34.64 2.44
540 552 2.597510 GAGCCCCCACAGCGTTTT 60.598 61.111 0.00 0.00 34.64 2.43
544 556 4.514577 CTACGAGCCCCCACAGCG 62.515 72.222 0.00 0.00 34.64 5.18
545 557 4.840005 GCTACGAGCCCCCACAGC 62.840 72.222 0.00 0.00 34.48 4.40
546 558 1.739338 CTAGCTACGAGCCCCCACAG 61.739 65.000 0.00 0.00 43.77 3.66
547 559 1.756950 CTAGCTACGAGCCCCCACA 60.757 63.158 0.00 0.00 43.77 4.17
548 560 3.130227 CTAGCTACGAGCCCCCAC 58.870 66.667 0.00 0.00 43.77 4.61
549 561 2.838225 GCTAGCTACGAGCCCCCA 60.838 66.667 7.70 0.00 43.77 4.96
550 562 2.522193 AGCTAGCTACGAGCCCCC 60.522 66.667 17.69 0.00 43.77 5.40
551 563 1.182385 ATCAGCTAGCTACGAGCCCC 61.182 60.000 18.86 0.00 43.77 5.80
552 564 0.676736 AATCAGCTAGCTACGAGCCC 59.323 55.000 18.86 0.00 43.77 5.19
553 565 1.604185 CCAATCAGCTAGCTACGAGCC 60.604 57.143 18.86 0.00 43.77 4.70
554 566 1.338337 TCCAATCAGCTAGCTACGAGC 59.662 52.381 18.86 0.00 42.84 5.03
555 567 2.881513 TCTCCAATCAGCTAGCTACGAG 59.118 50.000 18.86 16.18 0.00 4.18
556 568 2.619177 GTCTCCAATCAGCTAGCTACGA 59.381 50.000 18.86 12.31 0.00 3.43
557 569 2.359214 TGTCTCCAATCAGCTAGCTACG 59.641 50.000 18.86 6.30 0.00 3.51
558 570 4.305769 CATGTCTCCAATCAGCTAGCTAC 58.694 47.826 18.86 9.99 0.00 3.58
559 571 3.244009 GCATGTCTCCAATCAGCTAGCTA 60.244 47.826 18.86 6.64 0.00 3.32
560 572 2.485124 GCATGTCTCCAATCAGCTAGCT 60.485 50.000 12.68 12.68 0.00 3.32
561 573 1.872313 GCATGTCTCCAATCAGCTAGC 59.128 52.381 6.62 6.62 0.00 3.42
562 574 3.391965 GAGCATGTCTCCAATCAGCTAG 58.608 50.000 6.02 0.00 35.77 3.42
563 575 3.465742 GAGCATGTCTCCAATCAGCTA 57.534 47.619 6.02 0.00 35.77 3.32
564 576 2.328819 GAGCATGTCTCCAATCAGCT 57.671 50.000 6.02 0.00 35.77 4.24
573 585 2.946329 TCTCTCTAACGGAGCATGTCTC 59.054 50.000 8.20 8.20 41.60 3.36
574 586 2.685897 GTCTCTCTAACGGAGCATGTCT 59.314 50.000 0.00 0.00 41.60 3.41
575 587 2.223618 GGTCTCTCTAACGGAGCATGTC 60.224 54.545 0.00 0.00 41.60 3.06
576 588 1.751924 GGTCTCTCTAACGGAGCATGT 59.248 52.381 0.00 0.00 41.60 3.21
577 589 2.028130 AGGTCTCTCTAACGGAGCATG 58.972 52.381 0.00 0.00 41.60 4.06
578 590 2.303175 GAGGTCTCTCTAACGGAGCAT 58.697 52.381 0.00 0.00 41.60 3.79
579 591 1.752683 GAGGTCTCTCTAACGGAGCA 58.247 55.000 0.00 0.00 41.60 4.26
580 592 0.658897 CGAGGTCTCTCTAACGGAGC 59.341 60.000 0.00 0.00 41.60 4.70
622 634 1.745232 TGCGCTAATTGTCCCGAATT 58.255 45.000 9.73 0.00 0.00 2.17
713 725 4.565022 TGTCATCTACGCACAAGATTTGA 58.435 39.130 0.00 0.00 31.22 2.69
755 767 2.637025 CCCCACAGCGTTTTGACG 59.363 61.111 0.00 0.00 0.00 4.35
802 814 8.301720 AGAATGTTATCGCCGTATGAATTACTA 58.698 33.333 0.00 0.00 0.00 1.82
803 815 7.152645 AGAATGTTATCGCCGTATGAATTACT 58.847 34.615 0.00 0.00 0.00 2.24
804 816 7.347508 AGAATGTTATCGCCGTATGAATTAC 57.652 36.000 0.00 0.00 0.00 1.89
805 817 7.148869 CGAAGAATGTTATCGCCGTATGAATTA 60.149 37.037 0.00 0.00 0.00 1.40
806 818 6.346598 CGAAGAATGTTATCGCCGTATGAATT 60.347 38.462 0.00 0.00 0.00 2.17
808 820 4.443063 CGAAGAATGTTATCGCCGTATGAA 59.557 41.667 0.00 0.00 0.00 2.57
810 822 3.121279 CCGAAGAATGTTATCGCCGTATG 59.879 47.826 0.00 0.00 35.35 2.39
811 823 3.314553 CCGAAGAATGTTATCGCCGTAT 58.685 45.455 0.00 0.00 35.35 3.06
840 852 1.385528 AAACCGGACGAAAGCTGTTT 58.614 45.000 9.46 0.00 0.00 2.83
867 879 1.794714 TTGTTGGGGCCTTTTTGCTA 58.205 45.000 0.84 0.00 0.00 3.49
960 979 1.370064 CGAGGACAACGGAAAGGGT 59.630 57.895 0.00 0.00 0.00 4.34
1228 1250 2.237893 TCGAATCCAGAAGGGGGTTTAC 59.762 50.000 0.00 0.00 37.22 2.01
1266 1292 1.302949 CAATCCGAGGCTTGGGGAA 59.697 57.895 20.82 1.71 32.71 3.97
1269 1295 2.830370 GGCAATCCGAGGCTTGGG 60.830 66.667 20.82 10.01 0.00 4.12
1272 1298 2.187946 CGAGGCAATCCGAGGCTT 59.812 61.111 0.00 0.00 42.47 4.35
1380 1413 2.569134 GCGACGAACAGAGAGGCT 59.431 61.111 0.00 0.00 0.00 4.58
1699 1739 0.179045 AGCAGTTTCAGCAGAACGGT 60.179 50.000 0.00 0.00 32.39 4.83
1772 1812 3.315749 ACGAGCCGAAAACAAAAACCATA 59.684 39.130 1.50 0.00 0.00 2.74
1773 1813 2.100087 ACGAGCCGAAAACAAAAACCAT 59.900 40.909 1.50 0.00 0.00 3.55
1854 1896 1.681538 ATCCGCTCGATAGTCACACT 58.318 50.000 0.00 0.00 37.40 3.55
1855 1897 2.493713 AATCCGCTCGATAGTCACAC 57.506 50.000 0.00 0.00 37.40 3.82
1856 1898 3.473625 TCTAATCCGCTCGATAGTCACA 58.526 45.455 0.00 0.00 37.40 3.58
1857 1899 4.688511 ATCTAATCCGCTCGATAGTCAC 57.311 45.455 0.00 0.00 37.40 3.67
1858 1900 8.678593 AATATATCTAATCCGCTCGATAGTCA 57.321 34.615 0.00 0.00 37.40 3.41
1986 2085 9.371136 TGTCTACTGACTTCAATTTCACATATC 57.629 33.333 0.00 0.00 43.29 1.63
2148 2247 7.380602 GGATCACATATTTGCAATTTACTGCTC 59.619 37.037 0.00 0.00 43.07 4.26
2261 2360 8.150296 CCCATCACAATTACTACTGACATGATA 58.850 37.037 0.00 0.00 0.00 2.15
2703 2802 2.356535 GGTGCTGGATCCAGTTCTGAAT 60.357 50.000 36.32 0.00 45.24 2.57
2876 2975 7.479352 TCAAGGGAGCAAATGATTGAAATAA 57.521 32.000 0.00 0.00 38.94 1.40
2911 3010 1.882912 TGTGAACAGCAGCTAACTGG 58.117 50.000 17.59 3.35 44.63 4.00
3075 3175 7.293018 CACCGACACTACCATAAGTTAAAAAC 58.707 38.462 0.00 0.00 0.00 2.43
3081 3181 2.300723 TGCACCGACACTACCATAAGTT 59.699 45.455 0.00 0.00 0.00 2.66
3082 3182 1.897133 TGCACCGACACTACCATAAGT 59.103 47.619 0.00 0.00 0.00 2.24
3392 3492 9.567776 TCTTGAAAATAATCCAGTCAACAAGTA 57.432 29.630 0.00 0.00 34.60 2.24
3393 3493 8.463930 TCTTGAAAATAATCCAGTCAACAAGT 57.536 30.769 0.00 0.00 34.60 3.16
3394 3494 7.540055 GCTCTTGAAAATAATCCAGTCAACAAG 59.460 37.037 0.00 0.00 34.38 3.16
3395 3495 7.231317 AGCTCTTGAAAATAATCCAGTCAACAA 59.769 33.333 0.00 0.00 0.00 2.83
3396 3496 6.716628 AGCTCTTGAAAATAATCCAGTCAACA 59.283 34.615 0.00 0.00 0.00 3.33
3397 3497 7.150783 AGCTCTTGAAAATAATCCAGTCAAC 57.849 36.000 0.00 0.00 0.00 3.18
3398 3498 7.765695 AAGCTCTTGAAAATAATCCAGTCAA 57.234 32.000 0.00 0.00 0.00 3.18
3400 3500 8.951243 ACTAAAGCTCTTGAAAATAATCCAGTC 58.049 33.333 0.00 0.00 0.00 3.51
3781 3882 4.233123 ACTCAAGTTGATGTGCATGTTG 57.767 40.909 5.91 0.00 0.00 3.33
3808 3909 8.546083 TCATTATTTTTATTATGCCACCCAGT 57.454 30.769 0.00 0.00 0.00 4.00
3838 3939 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
3839 3940 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3840 3941 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3841 3942 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
3842 3943 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
3843 3944 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
3844 3945 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3859 3960 9.996554 TCACTTGTTGAAATATCTAGAAAGACA 57.003 29.630 0.00 0.00 33.57 3.41
3868 3969 9.302345 CGTATGTAGTCACTTGTTGAAATATCT 57.698 33.333 0.00 0.00 35.39 1.98
3869 3970 9.297586 TCGTATGTAGTCACTTGTTGAAATATC 57.702 33.333 0.00 0.00 35.39 1.63
3870 3971 9.647797 TTCGTATGTAGTCACTTGTTGAAATAT 57.352 29.630 0.00 0.00 35.39 1.28
3871 3972 9.135843 CTTCGTATGTAGTCACTTGTTGAAATA 57.864 33.333 0.00 0.00 35.39 1.40
3872 3973 7.360101 GCTTCGTATGTAGTCACTTGTTGAAAT 60.360 37.037 0.00 0.00 35.39 2.17
3873 3974 6.073980 GCTTCGTATGTAGTCACTTGTTGAAA 60.074 38.462 0.00 0.00 35.39 2.69
3874 3975 5.404366 GCTTCGTATGTAGTCACTTGTTGAA 59.596 40.000 0.00 0.00 35.39 2.69
3875 3976 4.921515 GCTTCGTATGTAGTCACTTGTTGA 59.078 41.667 0.00 0.00 0.00 3.18
3876 3977 4.684242 TGCTTCGTATGTAGTCACTTGTTG 59.316 41.667 0.00 0.00 0.00 3.33
3877 3978 4.878439 TGCTTCGTATGTAGTCACTTGTT 58.122 39.130 0.00 0.00 0.00 2.83
3878 3979 4.514781 TGCTTCGTATGTAGTCACTTGT 57.485 40.909 0.00 0.00 0.00 3.16
3879 3980 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
3880 3981 6.649141 TCATTTTGCTTCGTATGTAGTCACTT 59.351 34.615 0.00 0.00 0.00 3.16
3881 3982 6.163476 TCATTTTGCTTCGTATGTAGTCACT 58.837 36.000 0.00 0.00 0.00 3.41
3882 3983 6.090898 ACTCATTTTGCTTCGTATGTAGTCAC 59.909 38.462 0.00 0.00 0.00 3.67
3883 3984 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
3884 3985 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
3885 3986 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
3886 3987 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
3887 3988 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
3888 3989 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
3889 3990 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
3890 3991 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
3891 3992 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
3892 3993 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
3893 3994 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
3894 3995 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
3915 4016 9.809096 AGATGTATGTAGACACATTTTAGAGTG 57.191 33.333 0.00 0.00 42.98 3.51
3916 4017 9.809096 CAGATGTATGTAGACACATTTTAGAGT 57.191 33.333 0.00 0.00 42.98 3.24
3917 4018 9.809096 ACAGATGTATGTAGACACATTTTAGAG 57.191 33.333 0.00 0.00 42.98 2.43
3934 4035 6.439636 AATGGCTACCACATACAGATGTAT 57.560 37.500 0.00 0.00 44.82 2.29
3935 4036 5.887214 AATGGCTACCACATACAGATGTA 57.113 39.130 0.00 0.00 44.82 2.29
3937 4038 5.125356 TCAAATGGCTACCACATACAGATG 58.875 41.667 0.00 0.00 35.80 2.90
3938 4039 5.372343 TCAAATGGCTACCACATACAGAT 57.628 39.130 0.00 0.00 35.80 2.90
3939 4040 4.835284 TCAAATGGCTACCACATACAGA 57.165 40.909 0.00 0.00 35.80 3.41
3940 4041 5.895636 TTTCAAATGGCTACCACATACAG 57.104 39.130 0.00 0.00 35.80 2.74
3941 4042 5.714333 ACATTTCAAATGGCTACCACATACA 59.286 36.000 14.70 0.00 35.80 2.29
3942 4043 6.095440 AGACATTTCAAATGGCTACCACATAC 59.905 38.462 17.52 0.00 35.20 2.39
3943 4044 6.186957 AGACATTTCAAATGGCTACCACATA 58.813 36.000 17.52 0.00 35.20 2.29
3944 4045 5.018809 AGACATTTCAAATGGCTACCACAT 58.981 37.500 17.52 0.00 35.20 3.21
3945 4046 4.406456 AGACATTTCAAATGGCTACCACA 58.594 39.130 17.52 0.00 35.20 4.17
3946 4047 5.880332 TCTAGACATTTCAAATGGCTACCAC 59.120 40.000 20.19 0.99 38.54 4.16
3947 4048 6.061022 TCTAGACATTTCAAATGGCTACCA 57.939 37.500 20.19 8.41 38.54 3.25
3948 4049 7.336931 TCTTTCTAGACATTTCAAATGGCTACC 59.663 37.037 20.19 1.96 38.54 3.18
3949 4050 8.268850 TCTTTCTAGACATTTCAAATGGCTAC 57.731 34.615 20.19 6.25 38.54 3.58
3965 4066 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
3966 4067 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
3967 4068 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
3968 4069 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
3969 4070 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
3970 4071 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
3971 4072 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
3972 4073 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
3973 4074 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
3974 4075 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3975 4076 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3976 4077 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3977 4078 7.628501 AATACTCCCTCCGTTCCTAAATATT 57.371 36.000 0.00 0.00 0.00 1.28
3978 4079 7.628501 AAATACTCCCTCCGTTCCTAAATAT 57.371 36.000 0.00 0.00 0.00 1.28
3979 4080 7.786464 AGTAAATACTCCCTCCGTTCCTAAATA 59.214 37.037 0.00 0.00 0.00 1.40
3980 4081 5.970501 AAATACTCCCTCCGTTCCTAAAT 57.029 39.130 0.00 0.00 0.00 1.40
3981 4082 5.960202 AGTAAATACTCCCTCCGTTCCTAAA 59.040 40.000 0.00 0.00 0.00 1.85
3982 4083 5.522641 AGTAAATACTCCCTCCGTTCCTAA 58.477 41.667 0.00 0.00 0.00 2.69
3983 4084 5.134725 AGTAAATACTCCCTCCGTTCCTA 57.865 43.478 0.00 0.00 0.00 2.94
3984 4085 3.991683 AGTAAATACTCCCTCCGTTCCT 58.008 45.455 0.00 0.00 0.00 3.36
3985 4086 4.161001 TGAAGTAAATACTCCCTCCGTTCC 59.839 45.833 0.00 0.00 34.99 3.62
3986 4087 5.334724 TGAAGTAAATACTCCCTCCGTTC 57.665 43.478 0.00 0.00 34.99 3.95
3987 4088 5.338137 CCTTGAAGTAAATACTCCCTCCGTT 60.338 44.000 0.00 0.00 34.99 4.44
3988 4089 4.161754 CCTTGAAGTAAATACTCCCTCCGT 59.838 45.833 0.00 0.00 34.99 4.69
3989 4090 4.161754 ACCTTGAAGTAAATACTCCCTCCG 59.838 45.833 0.00 0.00 34.99 4.63
3990 4091 5.425862 AGACCTTGAAGTAAATACTCCCTCC 59.574 44.000 0.00 0.00 34.99 4.30
3991 4092 6.154706 TCAGACCTTGAAGTAAATACTCCCTC 59.845 42.308 0.00 0.00 34.99 4.30
3992 4093 6.023603 TCAGACCTTGAAGTAAATACTCCCT 58.976 40.000 0.00 0.00 34.99 4.20
3993 4094 6.154706 TCTCAGACCTTGAAGTAAATACTCCC 59.845 42.308 0.00 0.00 34.99 4.30
3994 4095 7.171630 TCTCAGACCTTGAAGTAAATACTCC 57.828 40.000 0.00 0.00 34.99 3.85
3995 4096 9.092876 CAATCTCAGACCTTGAAGTAAATACTC 57.907 37.037 0.00 0.00 34.99 2.59
3996 4097 8.598041 ACAATCTCAGACCTTGAAGTAAATACT 58.402 33.333 0.00 0.00 38.39 2.12
3997 4098 8.779354 ACAATCTCAGACCTTGAAGTAAATAC 57.221 34.615 0.00 0.00 34.81 1.89
3999 4100 9.965902 ATAACAATCTCAGACCTTGAAGTAAAT 57.034 29.630 0.00 0.00 34.81 1.40
4042 4144 9.974980 CCTGCCTCTGTTTAACTTAAATAAAAA 57.025 29.630 0.00 0.00 0.00 1.94
4570 4672 5.761726 TCAACACATTATTTGCCAAAATGCA 59.238 32.000 0.00 0.00 36.65 3.96
4571 4673 6.238610 TCAACACATTATTTGCCAAAATGC 57.761 33.333 0.00 0.00 36.65 3.56
4572 4674 7.746916 CACATCAACACATTATTTGCCAAAATG 59.253 33.333 0.00 0.00 36.65 2.32
4573 4675 7.444792 ACACATCAACACATTATTTGCCAAAAT 59.555 29.630 0.00 0.00 39.38 1.82
4574 4676 6.765036 ACACATCAACACATTATTTGCCAAAA 59.235 30.769 0.00 0.00 0.00 2.44
4575 4677 6.286758 ACACATCAACACATTATTTGCCAAA 58.713 32.000 0.00 0.00 0.00 3.28
4576 4678 5.851720 ACACATCAACACATTATTTGCCAA 58.148 33.333 0.00 0.00 0.00 4.52
4577 4679 5.465532 ACACATCAACACATTATTTGCCA 57.534 34.783 0.00 0.00 0.00 4.92
4578 4680 5.925397 TCAACACATCAACACATTATTTGCC 59.075 36.000 0.00 0.00 0.00 4.52
4579 4681 7.405469 TTCAACACATCAACACATTATTTGC 57.595 32.000 0.00 0.00 0.00 3.68
4580 4682 8.274939 GGTTTCAACACATCAACACATTATTTG 58.725 33.333 0.00 0.00 0.00 2.32
4581 4683 7.984050 TGGTTTCAACACATCAACACATTATTT 59.016 29.630 0.00 0.00 0.00 1.40
4582 4684 7.495901 TGGTTTCAACACATCAACACATTATT 58.504 30.769 0.00 0.00 0.00 1.40
4583 4685 7.048629 TGGTTTCAACACATCAACACATTAT 57.951 32.000 0.00 0.00 0.00 1.28
4584 4686 6.456795 TGGTTTCAACACATCAACACATTA 57.543 33.333 0.00 0.00 0.00 1.90
4585 4687 5.336150 TGGTTTCAACACATCAACACATT 57.664 34.783 0.00 0.00 0.00 2.71
4586 4688 4.998671 TGGTTTCAACACATCAACACAT 57.001 36.364 0.00 0.00 0.00 3.21
4587 4689 4.998671 ATGGTTTCAACACATCAACACA 57.001 36.364 0.00 0.00 0.00 3.72
4588 4690 4.744631 GGAATGGTTTCAACACATCAACAC 59.255 41.667 0.00 0.00 33.23 3.32
4589 4691 4.648762 AGGAATGGTTTCAACACATCAACA 59.351 37.500 0.00 0.00 33.23 3.33
4590 4692 4.984161 CAGGAATGGTTTCAACACATCAAC 59.016 41.667 0.00 0.00 33.23 3.18
4591 4693 4.892345 TCAGGAATGGTTTCAACACATCAA 59.108 37.500 0.00 0.00 33.23 2.57
4917 5053 2.047655 GCATTCCCGTCACCGTCA 60.048 61.111 0.00 0.00 0.00 4.35
5036 5172 4.202172 GCAGGGTAAGAGAGTCTATGAACC 60.202 50.000 0.00 0.00 0.00 3.62
5053 5189 1.202879 TCCAAAATCTTGACGCAGGGT 60.203 47.619 0.00 0.00 34.14 4.34
5103 5239 2.224137 TGAACTGTGTCCTTCTCTGCAG 60.224 50.000 7.63 7.63 0.00 4.41
5104 5240 1.762370 TGAACTGTGTCCTTCTCTGCA 59.238 47.619 0.00 0.00 0.00 4.41
5105 5241 2.533266 TGAACTGTGTCCTTCTCTGC 57.467 50.000 0.00 0.00 0.00 4.26
5106 5242 5.651387 TCTATGAACTGTGTCCTTCTCTG 57.349 43.478 0.00 0.00 0.00 3.35
5107 5243 6.667414 AGAATCTATGAACTGTGTCCTTCTCT 59.333 38.462 0.00 0.00 0.00 3.10
5108 5244 6.872920 AGAATCTATGAACTGTGTCCTTCTC 58.127 40.000 0.00 0.00 0.00 2.87
5109 5245 6.865834 AGAATCTATGAACTGTGTCCTTCT 57.134 37.500 0.00 0.00 0.00 2.85
5110 5246 7.870445 GGATAGAATCTATGAACTGTGTCCTTC 59.130 40.741 7.61 0.00 0.00 3.46
5111 5247 7.202047 GGGATAGAATCTATGAACTGTGTCCTT 60.202 40.741 7.61 0.00 0.00 3.36
5112 5248 6.268847 GGGATAGAATCTATGAACTGTGTCCT 59.731 42.308 7.61 0.00 0.00 3.85
5113 5249 6.268847 AGGGATAGAATCTATGAACTGTGTCC 59.731 42.308 7.61 0.14 0.00 4.02
5114 5250 7.151308 CAGGGATAGAATCTATGAACTGTGTC 58.849 42.308 7.61 0.00 0.00 3.67
5115 5251 6.463614 GCAGGGATAGAATCTATGAACTGTGT 60.464 42.308 7.61 0.00 0.00 3.72
5116 5252 5.931146 GCAGGGATAGAATCTATGAACTGTG 59.069 44.000 7.61 0.00 0.00 3.66
5159 5295 2.474526 CGCTGCTCTTTAACATCAACCG 60.475 50.000 0.00 0.00 0.00 4.44
5209 5347 5.994054 ACAAGCTCTATTAATCGATGCACAT 59.006 36.000 0.00 0.00 0.00 3.21
5286 5424 2.613595 TCCTTTATCGACATGCACATGC 59.386 45.455 10.50 0.00 42.39 4.06
5287 5425 4.880886 TTCCTTTATCGACATGCACATG 57.119 40.909 9.06 9.06 44.15 3.21
5288 5426 4.699735 TGTTTCCTTTATCGACATGCACAT 59.300 37.500 0.00 0.00 0.00 3.21
5289 5427 4.068599 TGTTTCCTTTATCGACATGCACA 58.931 39.130 0.00 0.00 0.00 4.57
5290 5428 4.678509 TGTTTCCTTTATCGACATGCAC 57.321 40.909 0.00 0.00 0.00 4.57
5335 5473 9.787532 GAAGATATTAAATGCAAACTAAGCACA 57.212 29.630 0.00 0.00 45.95 4.57
5336 5474 9.787532 TGAAGATATTAAATGCAAACTAAGCAC 57.212 29.630 0.00 0.00 45.95 4.40
5342 5480 9.135189 TGCCTATGAAGATATTAAATGCAAACT 57.865 29.630 0.00 0.00 0.00 2.66
5343 5481 9.403110 CTGCCTATGAAGATATTAAATGCAAAC 57.597 33.333 0.00 0.00 0.00 2.93
5344 5482 9.135189 ACTGCCTATGAAGATATTAAATGCAAA 57.865 29.630 0.00 0.00 0.00 3.68
5345 5483 8.696043 ACTGCCTATGAAGATATTAAATGCAA 57.304 30.769 0.00 0.00 0.00 4.08
5346 5484 8.696043 AACTGCCTATGAAGATATTAAATGCA 57.304 30.769 0.00 0.00 0.00 3.96
5356 5494 9.071276 CAATATTGGTTAACTGCCTATGAAGAT 57.929 33.333 7.62 0.00 0.00 2.40
5357 5495 8.052748 ACAATATTGGTTAACTGCCTATGAAGA 58.947 33.333 19.37 0.00 0.00 2.87
5358 5496 8.131100 CACAATATTGGTTAACTGCCTATGAAG 58.869 37.037 19.37 0.00 0.00 3.02
5373 5511 5.720371 TGCAAACTAAGCACAATATTGGT 57.280 34.783 19.37 3.89 37.02 3.67
5390 5528 6.610830 ACCCCACAAGATATATGAAATGCAAA 59.389 34.615 0.00 0.00 0.00 3.68
5393 5531 5.769662 TCACCCCACAAGATATATGAAATGC 59.230 40.000 0.00 0.00 0.00 3.56
5413 5551 1.678101 GGATTACTGCCAATGCTCACC 59.322 52.381 0.00 0.00 38.71 4.02
5414 5552 2.648059 AGGATTACTGCCAATGCTCAC 58.352 47.619 0.00 0.00 31.68 3.51
5447 5585 1.134946 ACCAAACTGAACAGCTTGCAC 59.865 47.619 11.09 0.00 34.20 4.57
5459 5597 8.265998 GTCAAAATATTGTCGAAAACCAAACTG 58.734 33.333 0.00 0.00 37.79 3.16
5469 5607 4.390603 CGGGACTGTCAAAATATTGTCGAA 59.609 41.667 10.38 0.00 37.79 3.71
5470 5608 3.930229 CGGGACTGTCAAAATATTGTCGA 59.070 43.478 10.38 0.00 37.79 4.20
5471 5609 3.682858 ACGGGACTGTCAAAATATTGTCG 59.317 43.478 10.38 0.00 37.79 4.35
5472 5610 4.693566 TCACGGGACTGTCAAAATATTGTC 59.306 41.667 10.38 0.00 37.79 3.18
5494 5643 5.880332 TGGATAAAGCTGTACATGGACTTTC 59.120 40.000 10.05 0.00 33.01 2.62
5514 5663 8.750515 AAAACAAAATTTCCATGTCTTTGGAT 57.249 26.923 0.00 0.00 45.08 3.41
5523 5672 8.121708 ACATTGTCGAAAAACAAAATTTCCATG 58.878 29.630 0.00 0.00 42.10 3.66
5526 5675 8.888332 AAACATTGTCGAAAAACAAAATTTCC 57.112 26.923 0.00 0.00 42.10 3.13
5556 5705 2.122413 AGTGCACCCTCCTCCACA 60.122 61.111 14.63 0.00 0.00 4.17
5572 5721 0.605589 AGCAGGGAGAACAACGAGAG 59.394 55.000 0.00 0.00 0.00 3.20
5574 5723 0.605589 AGAGCAGGGAGAACAACGAG 59.394 55.000 0.00 0.00 0.00 4.18
5580 5729 3.679389 TCAATGAAAGAGCAGGGAGAAC 58.321 45.455 0.00 0.00 0.00 3.01
5592 5741 6.520272 AGGGAAGATCGTCTATCAATGAAAG 58.480 40.000 8.59 0.00 37.03 2.62
5595 5744 4.216472 CGAGGGAAGATCGTCTATCAATGA 59.784 45.833 8.59 0.00 37.03 2.57
5603 5752 0.173708 GTTGCGAGGGAAGATCGTCT 59.826 55.000 8.59 0.00 42.13 4.18
5604 5753 0.108804 TGTTGCGAGGGAAGATCGTC 60.109 55.000 0.00 0.00 42.13 4.20
5605 5754 0.320374 TTGTTGCGAGGGAAGATCGT 59.680 50.000 0.00 0.00 42.13 3.73
5617 5767 2.621371 AAGGCCAAACCGTTGTTGCG 62.621 55.000 5.01 0.00 46.52 4.85
5619 5769 0.457851 TGAAGGCCAAACCGTTGTTG 59.542 50.000 5.01 0.00 46.52 3.33
5628 5778 2.360801 GTGTTGTAAGCTGAAGGCCAAA 59.639 45.455 5.01 0.00 43.05 3.28
5629 5779 1.953686 GTGTTGTAAGCTGAAGGCCAA 59.046 47.619 5.01 0.00 43.05 4.52
5630 5780 1.604604 GTGTTGTAAGCTGAAGGCCA 58.395 50.000 5.01 0.00 43.05 5.36
5631 5781 0.517316 CGTGTTGTAAGCTGAAGGCC 59.483 55.000 0.00 0.00 43.05 5.19
5632 5782 1.226746 ACGTGTTGTAAGCTGAAGGC 58.773 50.000 0.00 0.00 42.19 4.35
5633 5783 3.386486 TGTACGTGTTGTAAGCTGAAGG 58.614 45.455 0.00 0.00 34.07 3.46
5634 5784 4.084537 CCTTGTACGTGTTGTAAGCTGAAG 60.085 45.833 0.00 0.00 34.07 3.02
5635 5785 3.805422 CCTTGTACGTGTTGTAAGCTGAA 59.195 43.478 0.00 0.00 34.07 3.02
5636 5786 3.386486 CCTTGTACGTGTTGTAAGCTGA 58.614 45.455 0.00 0.00 34.07 4.26
5637 5787 2.096417 GCCTTGTACGTGTTGTAAGCTG 60.096 50.000 0.00 0.00 34.07 4.24
5638 5788 2.140717 GCCTTGTACGTGTTGTAAGCT 58.859 47.619 0.00 0.00 34.07 3.74
5639 5789 2.140717 AGCCTTGTACGTGTTGTAAGC 58.859 47.619 0.00 0.00 34.07 3.09
5640 5790 4.328983 CCATAGCCTTGTACGTGTTGTAAG 59.671 45.833 0.00 0.00 34.07 2.34
5641 5791 4.247258 CCATAGCCTTGTACGTGTTGTAA 58.753 43.478 0.00 0.00 34.07 2.41
5642 5792 3.852286 CCATAGCCTTGTACGTGTTGTA 58.148 45.455 0.00 0.00 0.00 2.41
5643 5793 2.695359 CCATAGCCTTGTACGTGTTGT 58.305 47.619 0.00 0.00 0.00 3.32
5644 5794 1.396996 GCCATAGCCTTGTACGTGTTG 59.603 52.381 0.00 0.00 0.00 3.33
5645 5795 1.734163 GCCATAGCCTTGTACGTGTT 58.266 50.000 0.00 0.00 0.00 3.32
5646 5796 0.459585 CGCCATAGCCTTGTACGTGT 60.460 55.000 0.00 0.00 34.57 4.49
5647 5797 1.762222 GCGCCATAGCCTTGTACGTG 61.762 60.000 0.00 0.00 34.57 4.49
5648 5798 1.520787 GCGCCATAGCCTTGTACGT 60.521 57.895 0.00 0.00 34.57 3.57
5649 5799 1.490693 CTGCGCCATAGCCTTGTACG 61.491 60.000 4.18 0.00 36.02 3.67
5650 5800 0.179084 TCTGCGCCATAGCCTTGTAC 60.179 55.000 4.18 0.00 36.02 2.90
5689 5859 4.275689 CCAAATCAGGCGCTTGATTATGTA 59.724 41.667 37.80 12.28 44.74 2.29
5736 5907 8.147793 CGTCGTATTAATCGATGAAACATAGTG 58.852 37.037 17.38 0.00 44.02 2.74
5746 5917 7.253027 GCTCTACATTCGTCGTATTAATCGATG 60.253 40.741 16.69 16.69 43.08 3.84
5749 5920 5.849604 TGCTCTACATTCGTCGTATTAATCG 59.150 40.000 0.00 0.00 0.00 3.34
5758 5929 7.952101 CCAATAAAATATGCTCTACATTCGTCG 59.048 37.037 0.00 0.00 40.38 5.12
5822 5998 2.795231 TAGCCAGCTCTGCAATTTCT 57.205 45.000 7.45 0.00 0.00 2.52
5833 6009 5.625150 TCTCTTCTTTTCTTTTAGCCAGCT 58.375 37.500 0.00 0.00 0.00 4.24
5854 6030 1.115467 AGTCTCCAATCCGCGATTCT 58.885 50.000 8.23 0.00 28.87 2.40
5983 6159 6.620877 TGTTCCTTCCTAGTGTTGATATGT 57.379 37.500 0.00 0.00 0.00 2.29
5996 6190 4.640771 TTCTGTATGCTTGTTCCTTCCT 57.359 40.909 0.00 0.00 0.00 3.36
5999 6193 6.273071 GTTGTTTTCTGTATGCTTGTTCCTT 58.727 36.000 0.00 0.00 0.00 3.36
6005 6199 4.481930 TCCGTTGTTTTCTGTATGCTTG 57.518 40.909 0.00 0.00 0.00 4.01
6008 6202 5.173131 CAGTTTTCCGTTGTTTTCTGTATGC 59.827 40.000 0.00 0.00 0.00 3.14
6012 6206 3.759618 TCCAGTTTTCCGTTGTTTTCTGT 59.240 39.130 0.00 0.00 0.00 3.41
6037 6234 1.352687 AGAAGTTCTGAGCCCCCTTTC 59.647 52.381 4.10 0.00 0.00 2.62
6108 6305 1.077787 TTCGCCGGCAATGAGGAAT 60.078 52.632 28.98 0.00 0.00 3.01
6135 6332 1.954382 GTCTTTCCCCTGTTGGTTGTC 59.046 52.381 0.00 0.00 0.00 3.18
6165 6374 4.675114 CACAAATCGCTTGGTTCTTAACAC 59.325 41.667 2.71 0.00 39.56 3.32
6211 6818 1.390463 CCGTAAGCTGTTCTTCGCTTC 59.610 52.381 0.00 0.00 44.64 3.86
6280 7180 2.457598 ACAAGAACGCATCTCTCCCTA 58.542 47.619 0.00 0.00 37.42 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.