Multiple sequence alignment - TraesCS1D01G214400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G214400 chr1D 100.000 6749 0 0 1 6749 299723670 299716922 0.000000e+00 12464.0
1 TraesCS1D01G214400 chr1D 96.657 1017 32 1 1401 2417 299721170 299720156 0.000000e+00 1688.0
2 TraesCS1D01G214400 chr1D 96.657 1017 32 1 2501 3515 299722270 299721254 0.000000e+00 1688.0
3 TraesCS1D01G214400 chr1D 97.356 643 15 1 2527 3167 299720153 299719511 0.000000e+00 1092.0
4 TraesCS1D01G214400 chr1D 97.356 643 15 1 3518 4160 299721144 299720504 0.000000e+00 1092.0
5 TraesCS1D01G214400 chr1D 95.814 645 27 0 1425 2069 299720155 299719511 0.000000e+00 1042.0
6 TraesCS1D01G214400 chr1D 95.814 645 27 0 3516 4160 299722246 299721602 0.000000e+00 1042.0
7 TraesCS1D01G214400 chr1D 98.750 400 5 0 6350 6749 86815124 86815523 0.000000e+00 712.0
8 TraesCS1D01G214400 chr1D 98.750 400 5 0 6350 6749 320813507 320813906 0.000000e+00 712.0
9 TraesCS1D01G214400 chr1A 95.253 1559 49 9 4157 5709 374056469 374054930 0.000000e+00 2446.0
10 TraesCS1D01G214400 chr1A 92.671 1419 84 13 1 1402 374057880 374056465 0.000000e+00 2026.0
11 TraesCS1D01G214400 chr1A 89.174 896 78 16 1715 2596 49748313 49747423 0.000000e+00 1099.0
12 TraesCS1D01G214400 chr1A 92.373 708 49 3 2813 3515 49748313 49747606 0.000000e+00 1003.0
13 TraesCS1D01G214400 chr1A 87.361 451 49 3 5814 6256 564659533 564659983 1.680000e-140 510.0
14 TraesCS1D01G214400 chr1A 90.582 361 29 3 3801 4156 49747223 49746863 2.200000e-129 473.0
15 TraesCS1D01G214400 chr1A 90.582 361 29 3 2808 3163 49747223 49746863 2.200000e-129 473.0
16 TraesCS1D01G214400 chr1A 90.278 360 30 3 3806 4160 49748313 49747954 3.690000e-127 466.0
17 TraesCS1D01G214400 chr1A 89.751 361 32 3 1710 2065 49747223 49746863 2.220000e-124 457.0
18 TraesCS1D01G214400 chr7B 86.151 1307 105 25 1578 2851 284942973 284941710 0.000000e+00 1341.0
19 TraesCS1D01G214400 chr7B 87.230 1018 66 20 2535 3520 284943138 284942153 0.000000e+00 1101.0
20 TraesCS1D01G214400 chr7B 86.015 665 31 19 3526 4160 284943138 284942506 0.000000e+00 656.0
21 TraesCS1D01G214400 chr7B 94.969 318 16 0 2846 3163 284939348 284939031 3.630000e-137 499.0
22 TraesCS1D01G214400 chr7B 94.340 318 18 0 1748 2065 284939348 284939031 7.870000e-134 488.0
23 TraesCS1D01G214400 chr7B 93.789 322 20 0 3839 4160 284939348 284939027 1.020000e-132 484.0
24 TraesCS1D01G214400 chr7B 82.000 350 14 12 3525 3844 284942040 284941710 1.120000e-62 252.0
25 TraesCS1D01G214400 chr7B 91.160 181 5 1 1573 1753 284941879 284941710 1.130000e-57 235.0
26 TraesCS1D01G214400 chr7B 95.714 70 1 1 1509 1576 284941971 284941902 1.990000e-20 111.0
27 TraesCS1D01G214400 chr7B 94.521 73 2 1 1509 1579 284943070 284942998 1.990000e-20 111.0
28 TraesCS1D01G214400 chr2D 91.411 815 44 17 1811 2616 178689838 178690635 0.000000e+00 1094.0
29 TraesCS1D01G214400 chr2D 94.536 604 23 3 2909 3512 178689838 178690431 0.000000e+00 924.0
30 TraesCS1D01G214400 chr2D 97.800 409 7 2 6342 6749 150050145 150049738 0.000000e+00 704.0
31 TraesCS1D01G214400 chr2D 85.993 564 64 12 2041 2596 44285816 44286372 2.100000e-164 590.0
32 TraesCS1D01G214400 chr2D 82.623 610 55 22 5780 6343 113534685 113534081 6.080000e-135 492.0
33 TraesCS1D01G214400 chr2D 89.037 374 34 7 3803 4172 178690738 178691108 2.220000e-124 457.0
34 TraesCS1D01G214400 chr2D 87.023 393 47 3 3111 3503 44276111 44276499 2.230000e-119 440.0
35 TraesCS1D01G214400 chr2D 86.768 393 48 3 3111 3503 44257622 44258010 1.040000e-117 435.0
36 TraesCS1D01G214400 chr2D 80.131 609 66 24 5780 6339 28099191 28098589 2.930000e-108 403.0
37 TraesCS1D01G214400 chr2D 90.747 281 23 3 5976 6255 543811778 543811500 8.270000e-99 372.0
38 TraesCS1D01G214400 chr2D 85.255 373 26 15 5976 6322 543760068 543759699 2.310000e-94 357.0
39 TraesCS1D01G214400 chr2D 98.837 86 1 0 3518 3603 451924288 451924373 3.260000e-33 154.0
40 TraesCS1D01G214400 chr2D 98.837 86 1 0 3518 3603 451925821 451925906 3.260000e-33 154.0
41 TraesCS1D01G214400 chr2D 79.355 155 21 5 5813 5966 518604713 518604569 1.550000e-16 99.0
42 TraesCS1D01G214400 chr3A 90.334 569 43 11 2035 2596 692203231 692203794 0.000000e+00 736.0
43 TraesCS1D01G214400 chr3A 92.556 403 26 3 3111 3511 692203209 692203609 5.870000e-160 575.0
44 TraesCS1D01G214400 chr3A 82.947 604 50 22 5780 6343 352495059 352494469 4.700000e-136 496.0
45 TraesCS1D01G214400 chr3A 81.023 606 61 25 5780 6338 447619895 447619297 3.740000e-117 433.0
46 TraesCS1D01G214400 chr3A 82.447 188 31 2 5780 5966 669964785 669964971 5.420000e-36 163.0
47 TraesCS1D01G214400 chr3A 82.292 96 17 0 5856 5951 22648719 22648624 4.340000e-12 84.2
48 TraesCS1D01G214400 chr5D 97.519 403 10 0 6347 6749 403591441 403591039 0.000000e+00 689.0
49 TraesCS1D01G214400 chr5D 97.257 401 11 0 6349 6749 331644162 331643762 0.000000e+00 680.0
50 TraesCS1D01G214400 chr5D 96.758 401 13 0 6349 6749 352913872 352914272 0.000000e+00 669.0
51 TraesCS1D01G214400 chr5D 85.371 499 46 11 5781 6256 337145055 337144561 6.080000e-135 492.0
52 TraesCS1D01G214400 chr5D 81.542 428 64 10 390 807 526468718 526468296 8.380000e-89 339.0
53 TraesCS1D01G214400 chr5D 87.805 82 6 4 6259 6339 337144534 337144456 7.210000e-15 93.5
54 TraesCS1D01G214400 chr3D 97.756 401 8 1 6349 6749 19115030 19114631 0.000000e+00 689.0
55 TraesCS1D01G214400 chr3D 89.579 451 39 4 5814 6256 516989990 516989540 3.530000e-157 566.0
56 TraesCS1D01G214400 chr3D 86.400 500 42 12 5780 6256 271486896 271486400 2.160000e-144 523.0
57 TraesCS1D01G214400 chr3D 85.185 486 62 6 5780 6256 83937174 83937658 2.190000e-134 490.0
58 TraesCS1D01G214400 chr3D 84.492 187 26 3 5781 5966 602792906 602793090 1.500000e-41 182.0
59 TraesCS1D01G214400 chr3D 92.929 99 6 1 3518 3616 446756986 446757083 7.060000e-30 143.0
60 TraesCS1D01G214400 chr3D 90.667 75 6 1 6269 6343 271486363 271486290 1.550000e-16 99.0
61 TraesCS1D01G214400 chr7D 97.257 401 9 2 6350 6749 352021534 352021135 0.000000e+00 678.0
62 TraesCS1D01G214400 chr7D 80.428 608 64 25 5781 6339 479134845 479135446 4.870000e-111 412.0
63 TraesCS1D01G214400 chr7D 86.719 128 15 2 5822 5948 122935006 122935132 2.540000e-29 141.0
64 TraesCS1D01G214400 chr6D 97.000 400 12 0 6350 6749 158155362 158154963 0.000000e+00 673.0
65 TraesCS1D01G214400 chr6D 83.567 499 55 9 5780 6256 418534461 418533968 6.210000e-120 442.0
66 TraesCS1D01G214400 chrUn 85.993 564 64 12 2041 2596 253923567 253924123 2.100000e-164 590.0
67 TraesCS1D01G214400 chrUn 85.816 564 65 12 2041 2596 285228220 285228776 9.750000e-163 584.0
68 TraesCS1D01G214400 chrUn 85.816 564 65 12 2041 2596 366273349 366273905 9.750000e-163 584.0
69 TraesCS1D01G214400 chrUn 90.960 354 28 2 2813 3163 126842172 126841820 2.200000e-129 473.0
70 TraesCS1D01G214400 chrUn 90.678 354 29 4 3806 4156 126842172 126841820 1.020000e-127 468.0
71 TraesCS1D01G214400 chrUn 89.831 354 32 2 1715 2065 126842172 126841820 1.030000e-122 451.0
72 TraesCS1D01G214400 chrUn 87.277 393 46 3 3111 3503 418445563 418445175 4.800000e-121 446.0
73 TraesCS1D01G214400 chrUn 87.023 393 47 3 3111 3503 254787563 254787175 2.230000e-119 440.0
74 TraesCS1D01G214400 chr7A 90.191 367 28 5 2808 3168 254565734 254566098 7.920000e-129 472.0
75 TraesCS1D01G214400 chr7A 90.164 366 28 5 3801 4160 254565734 254566097 2.850000e-128 470.0
76 TraesCS1D01G214400 chr7A 90.169 356 30 3 1715 2065 39136862 39137217 6.170000e-125 459.0
77 TraesCS1D01G214400 chr7A 90.169 356 30 3 2813 3163 39136862 39137217 6.170000e-125 459.0
78 TraesCS1D01G214400 chr7A 89.807 363 29 5 1714 2070 254565738 254566098 6.170000e-125 459.0
79 TraesCS1D01G214400 chr7A 80.435 460 60 13 5814 6256 492770023 492770469 2.350000e-84 324.0
80 TraesCS1D01G214400 chr7A 84.615 78 7 4 171 244 69528734 69528810 9.390000e-09 73.1
81 TraesCS1D01G214400 chr4B 84.024 507 35 18 5881 6343 412113512 412113008 4.800000e-121 446.0
82 TraesCS1D01G214400 chr1B 83.501 497 59 10 5781 6256 565691815 565692309 6.210000e-120 442.0
83 TraesCS1D01G214400 chr1B 94.444 108 3 2 1583 1687 674478475 674478582 5.420000e-36 163.0
84 TraesCS1D01G214400 chr1B 93.519 108 4 2 2681 2785 674478475 674478582 2.520000e-34 158.0
85 TraesCS1D01G214400 chr1B 93.519 108 4 2 3674 3778 674478475 674478582 2.520000e-34 158.0
86 TraesCS1D01G214400 chr1B 95.652 92 4 0 1684 1775 674478854 674478945 1.520000e-31 148.0
87 TraesCS1D01G214400 chr1B 95.652 92 4 0 3775 3866 674478854 674478945 1.520000e-31 148.0
88 TraesCS1D01G214400 chr1B 94.805 77 1 3 2603 2677 674478369 674478444 4.280000e-22 117.0
89 TraesCS1D01G214400 chr1B 94.805 77 1 3 3596 3670 674478369 674478444 4.280000e-22 117.0
90 TraesCS1D01G214400 chr1B 93.506 77 2 3 1505 1579 674478369 674478444 1.990000e-20 111.0
91 TraesCS1D01G214400 chr1B 86.517 89 9 3 6256 6343 565692333 565692419 2.000000e-15 95.3
92 TraesCS1D01G214400 chr2A 82.530 498 62 11 5780 6256 115144691 115144198 1.350000e-111 414.0
93 TraesCS1D01G214400 chr4D 76.000 575 92 28 5807 6339 99280775 99281345 8.690000e-64 255.0
94 TraesCS1D01G214400 chr4D 98.837 86 1 0 3518 3603 226568572 226568657 3.260000e-33 154.0
95 TraesCS1D01G214400 chr4D 98.837 86 1 0 3518 3603 226570099 226570184 3.260000e-33 154.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G214400 chr1D 299716922 299723670 6748 True 12464.000000 12464 100.000000 1 6749 1 chr1D.!!$R1 6748
1 TraesCS1D01G214400 chr1D 299719511 299722270 2759 True 1274.000000 1688 96.609000 1401 4160 6 chr1D.!!$R2 2759
2 TraesCS1D01G214400 chr1A 374054930 374057880 2950 True 2236.000000 2446 93.962000 1 5709 2 chr1A.!!$R2 5708
3 TraesCS1D01G214400 chr1A 49746863 49748313 1450 True 661.833333 1099 90.456667 1710 4160 6 chr1A.!!$R1 2450
4 TraesCS1D01G214400 chr7B 284939027 284943138 4111 True 527.800000 1341 90.588900 1509 4160 10 chr7B.!!$R1 2651
5 TraesCS1D01G214400 chr2D 178689838 178691108 1270 False 825.000000 1094 91.661333 1811 4172 3 chr2D.!!$F4 2361
6 TraesCS1D01G214400 chr2D 44285816 44286372 556 False 590.000000 590 85.993000 2041 2596 1 chr2D.!!$F3 555
7 TraesCS1D01G214400 chr2D 113534081 113534685 604 True 492.000000 492 82.623000 5780 6343 1 chr2D.!!$R2 563
8 TraesCS1D01G214400 chr2D 28098589 28099191 602 True 403.000000 403 80.131000 5780 6339 1 chr2D.!!$R1 559
9 TraesCS1D01G214400 chr3A 692203209 692203794 585 False 655.500000 736 91.445000 2035 3511 2 chr3A.!!$F2 1476
10 TraesCS1D01G214400 chr3A 352494469 352495059 590 True 496.000000 496 82.947000 5780 6343 1 chr3A.!!$R2 563
11 TraesCS1D01G214400 chr3A 447619297 447619895 598 True 433.000000 433 81.023000 5780 6338 1 chr3A.!!$R3 558
12 TraesCS1D01G214400 chr5D 337144456 337145055 599 True 292.750000 492 86.588000 5781 6339 2 chr5D.!!$R4 558
13 TraesCS1D01G214400 chr3D 271486290 271486896 606 True 311.000000 523 88.533500 5780 6343 2 chr3D.!!$R3 563
14 TraesCS1D01G214400 chr7D 479134845 479135446 601 False 412.000000 412 80.428000 5781 6339 1 chr7D.!!$F2 558
15 TraesCS1D01G214400 chrUn 253923567 253924123 556 False 590.000000 590 85.993000 2041 2596 1 chrUn.!!$F1 555
16 TraesCS1D01G214400 chrUn 285228220 285228776 556 False 584.000000 584 85.816000 2041 2596 1 chrUn.!!$F2 555
17 TraesCS1D01G214400 chrUn 366273349 366273905 556 False 584.000000 584 85.816000 2041 2596 1 chrUn.!!$F3 555
18 TraesCS1D01G214400 chr4B 412113008 412113512 504 True 446.000000 446 84.024000 5881 6343 1 chr4B.!!$R1 462
19 TraesCS1D01G214400 chr1B 565691815 565692419 604 False 268.650000 442 85.009000 5781 6343 2 chr1B.!!$F1 562
20 TraesCS1D01G214400 chr4D 99280775 99281345 570 False 255.000000 255 76.000000 5807 6339 1 chr4D.!!$F1 532

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
907 911 0.185901 ACCAACAACAGTCATGGCCT 59.814 50.000 3.32 0.00 36.37 5.19 F
1024 1041 0.461693 GATCACTGCAGAGCTCACCC 60.462 60.000 23.35 3.87 0.00 4.61 F
4346 6894 1.458777 TCCCAGGTGAGTTCGGTGT 60.459 57.895 0.00 0.00 0.00 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
4213 6761 4.459089 GCTCCACCTCTCACCGCC 62.459 72.222 0.00 0.00 0.0 6.13 R
4376 6924 6.492007 TTTGCTGATCTGAATTCTGAAGTC 57.508 37.500 17.62 10.67 0.0 3.01 R
6464 9081 0.098728 CCGCCATAAAAAGCAGACGG 59.901 55.000 0.00 0.00 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 1.480683 CCAAGCCCGTCCTCCTATAGA 60.481 57.143 0.00 0.00 0.00 1.98
96 97 2.064581 GTGATCCGCCCCAGTAGGT 61.065 63.158 0.00 0.00 0.00 3.08
110 111 3.976490 TAGGTGGTGGCGGAGGGAG 62.976 68.421 0.00 0.00 0.00 4.30
132 133 2.752030 TCATCCTCTAGTGGACCTTGG 58.248 52.381 15.63 4.29 39.17 3.61
137 138 4.077184 TAGTGGACCTTGGCGCCG 62.077 66.667 23.90 10.49 0.00 6.46
161 162 1.757306 CACACTCTCCAGGCACCTT 59.243 57.895 0.00 0.00 0.00 3.50
213 215 2.624169 GAGATCGTCCTCTCCTCCG 58.376 63.158 0.00 0.00 36.47 4.63
215 217 2.519780 ATCGTCCTCTCCTCCGGC 60.520 66.667 0.00 0.00 0.00 6.13
218 220 3.519930 GTCCTCTCCTCCGGCGAC 61.520 72.222 9.30 0.00 0.00 5.19
232 236 2.182030 CGACCGAGGACCAGAAGC 59.818 66.667 0.00 0.00 0.00 3.86
236 240 4.821589 CGAGGACCAGAAGCCGCC 62.822 72.222 0.00 0.00 0.00 6.13
306 310 2.031683 CGCCGGTTAGTTGGAAATCATC 59.968 50.000 1.90 0.00 0.00 2.92
309 313 3.063452 CCGGTTAGTTGGAAATCATCACG 59.937 47.826 0.00 0.00 0.00 4.35
338 342 3.402681 CCGTCAGATGGGCCCAGT 61.403 66.667 31.97 17.74 0.00 4.00
450 454 1.748493 GCGGCCTCAACATCCAAATTA 59.252 47.619 0.00 0.00 0.00 1.40
498 502 2.181521 TCGTCACCGGCAAACAACC 61.182 57.895 0.00 0.00 33.95 3.77
550 554 3.276091 CCGCCGCAATTATCGCCA 61.276 61.111 0.00 0.00 0.00 5.69
588 592 2.415843 CGCCGGCGATAAGGAAGA 59.584 61.111 44.86 0.00 42.83 2.87
595 599 1.488527 GCGATAAGGAAGACGCGAAT 58.511 50.000 15.93 0.00 41.49 3.34
628 632 4.436998 CTCGGAGGCGGTGGTGTC 62.437 72.222 0.00 0.00 0.00 3.67
653 657 4.860881 CCTCGGGCTCCAGGGCTA 62.861 72.222 0.00 0.00 40.65 3.93
655 659 2.524394 TCGGGCTCCAGGGCTATC 60.524 66.667 0.00 0.00 40.65 2.08
660 664 1.663173 GCTCCAGGGCTATCGTCTC 59.337 63.158 0.00 0.00 0.00 3.36
702 706 4.501714 GCGGGCACGATACGACCA 62.502 66.667 15.48 0.00 44.60 4.02
703 707 2.278596 CGGGCACGATACGACCAG 60.279 66.667 0.00 0.00 44.60 4.00
740 744 1.291877 CTCCTCGTTTGCAAGACCGG 61.292 60.000 0.00 0.00 0.00 5.28
808 812 4.148825 GATCGCTCCGCCACCAGT 62.149 66.667 0.00 0.00 0.00 4.00
812 816 3.695606 GCTCCGCCACCAGTGAGA 61.696 66.667 0.00 0.00 0.00 3.27
818 822 2.258591 CCACCAGTGAGACGGACG 59.741 66.667 0.00 0.00 0.00 4.79
820 824 2.910479 ACCAGTGAGACGGACGCA 60.910 61.111 0.00 0.00 0.00 5.24
889 893 5.633927 ACTTTGACTAAACCGTGACAAAAC 58.366 37.500 0.00 0.00 30.55 2.43
906 910 1.039856 AACCAACAACAGTCATGGCC 58.960 50.000 0.00 0.00 36.37 5.36
907 911 0.185901 ACCAACAACAGTCATGGCCT 59.814 50.000 3.32 0.00 36.37 5.19
908 912 0.883833 CCAACAACAGTCATGGCCTC 59.116 55.000 3.32 0.00 0.00 4.70
909 913 1.608055 CAACAACAGTCATGGCCTCA 58.392 50.000 3.32 0.00 0.00 3.86
971 988 3.160585 CCCTGTGCTGAACCTCCA 58.839 61.111 0.00 0.00 0.00 3.86
1024 1041 0.461693 GATCACTGCAGAGCTCACCC 60.462 60.000 23.35 3.87 0.00 4.61
1279 1296 1.591059 CGAGCTCATGGGCTTCTCG 60.591 63.158 23.75 17.45 43.20 4.04
4346 6894 1.458777 TCCCAGGTGAGTTCGGTGT 60.459 57.895 0.00 0.00 0.00 4.16
4418 6966 1.402787 AACCAAAACTCAGCTGGTGG 58.597 50.000 15.13 15.24 42.72 4.61
4419 6967 0.258774 ACCAAAACTCAGCTGGTGGT 59.741 50.000 15.13 15.85 41.95 4.16
4442 6990 8.049117 TGGTAGATAAGAGCAATGTTCATTTCT 58.951 33.333 0.00 0.69 0.00 2.52
4501 7050 0.885196 ACGCCACAATTACCGCATTT 59.115 45.000 0.00 0.00 0.00 2.32
4581 7133 2.768527 TCTCTGAAGAAATGGCTCCGAT 59.231 45.455 0.00 0.00 0.00 4.18
4585 7137 5.684704 TCTGAAGAAATGGCTCCGATTAAT 58.315 37.500 0.00 0.00 0.00 1.40
4685 7237 2.476051 GTGCACATCGCGTCAAGG 59.524 61.111 13.17 0.00 46.97 3.61
4736 7288 1.946984 TCGACCCCTACCTGAATGTT 58.053 50.000 0.00 0.00 0.00 2.71
4763 7315 2.693069 CACGCAGAGGTTCAGAAGAAT 58.307 47.619 0.00 0.00 35.92 2.40
4795 7347 6.901615 TTCCTATTCCCATCAAACCTCTTA 57.098 37.500 0.00 0.00 0.00 2.10
4812 7364 4.383552 CCTCTTACCTTTCCAGTGGATCAG 60.384 50.000 14.00 12.01 0.00 2.90
4813 7365 3.519510 TCTTACCTTTCCAGTGGATCAGG 59.480 47.826 26.51 26.51 38.08 3.86
4814 7366 2.044793 ACCTTTCCAGTGGATCAGGA 57.955 50.000 31.67 10.17 36.53 3.86
4815 7367 2.566746 ACCTTTCCAGTGGATCAGGAT 58.433 47.619 31.67 19.05 36.53 3.24
4816 7368 2.507471 ACCTTTCCAGTGGATCAGGATC 59.493 50.000 31.67 0.55 36.53 3.36
4817 7369 2.507058 CCTTTCCAGTGGATCAGGATCA 59.493 50.000 25.01 2.27 39.54 2.92
5131 7683 2.188994 GAGGGCGCTGATTGAGCT 59.811 61.111 8.56 0.00 46.64 4.09
5137 7689 1.647629 CGCTGATTGAGCTGATGGC 59.352 57.895 0.00 0.00 46.64 4.40
5138 7690 1.647629 GCTGATTGAGCTGATGGCG 59.352 57.895 0.00 0.00 45.21 5.69
5139 7691 2.389866 GCTGATTGAGCTGATGGCGC 62.390 60.000 0.00 0.00 45.21 6.53
5349 7901 0.107654 GAATGGGTCAGTAGCGGCTT 60.108 55.000 8.26 0.00 0.00 4.35
5350 7902 0.107654 AATGGGTCAGTAGCGGCTTC 60.108 55.000 8.26 2.32 0.00 3.86
5351 7903 0.978146 ATGGGTCAGTAGCGGCTTCT 60.978 55.000 8.26 5.34 0.00 2.85
5352 7904 1.153549 GGGTCAGTAGCGGCTTCTG 60.154 63.158 25.26 25.26 31.58 3.02
5353 7905 1.605058 GGGTCAGTAGCGGCTTCTGA 61.605 60.000 28.42 28.42 35.97 3.27
5354 7906 0.246635 GGTCAGTAGCGGCTTCTGAA 59.753 55.000 32.02 18.28 39.04 3.02
5374 7926 2.435372 TTCTTGTGGTGTTTGCCTCT 57.565 45.000 0.00 0.00 0.00 3.69
5381 7933 1.230324 GGTGTTTGCCTCTGACAGTC 58.770 55.000 1.59 0.00 0.00 3.51
5392 7944 4.556233 CCTCTGACAGTCGTGAAAACATA 58.444 43.478 1.59 0.00 0.00 2.29
5393 7945 5.171476 CCTCTGACAGTCGTGAAAACATAT 58.829 41.667 1.59 0.00 0.00 1.78
5399 7951 4.754618 ACAGTCGTGAAAACATATTCTGCA 59.245 37.500 0.00 0.00 0.00 4.41
5402 7954 6.086765 CAGTCGTGAAAACATATTCTGCAAAC 59.913 38.462 0.00 0.00 0.00 2.93
5414 7966 2.353858 TGCAAACAGAATGGGCAGG 58.646 52.632 0.00 0.00 43.62 4.85
5415 7967 0.178967 TGCAAACAGAATGGGCAGGA 60.179 50.000 0.00 0.00 43.62 3.86
5425 7977 0.343372 ATGGGCAGGACTCCTAAGGA 59.657 55.000 0.00 0.00 29.64 3.36
5426 7978 0.118346 TGGGCAGGACTCCTAAGGAA 59.882 55.000 0.00 0.00 29.64 3.36
5427 7979 0.833949 GGGCAGGACTCCTAAGGAAG 59.166 60.000 0.00 0.00 29.64 3.46
5432 7984 3.262151 GCAGGACTCCTAAGGAAGTCTTT 59.738 47.826 0.00 0.00 36.93 2.52
5437 7989 6.788456 AGGACTCCTAAGGAAGTCTTTTTAGT 59.212 38.462 0.00 0.00 36.93 2.24
5470 8022 1.745489 GATGGGGTCGTGCTTGGTC 60.745 63.158 0.00 0.00 0.00 4.02
5492 8044 3.849951 CGGCGGCAGGTGGAGTAT 61.850 66.667 10.53 0.00 0.00 2.12
5585 8137 2.202544 CAGCGCGTCTGGTCTCTC 60.203 66.667 18.78 0.00 39.15 3.20
5649 8201 4.304110 CAGTGGCGACAGTAAAGTTTAGA 58.696 43.478 0.00 0.00 43.90 2.10
5656 8208 6.366877 GGCGACAGTAAAGTTTAGAATGTGTA 59.633 38.462 11.02 0.00 0.00 2.90
5665 8217 6.932356 AGTTTAGAATGTGTATCTGCATGG 57.068 37.500 0.00 0.00 0.00 3.66
5682 8234 6.371548 TCTGCATGGTTATCTTAACAACTGTC 59.628 38.462 0.00 0.00 0.00 3.51
5683 8235 6.237901 TGCATGGTTATCTTAACAACTGTCT 58.762 36.000 0.00 0.00 0.00 3.41
5684 8236 7.390823 TGCATGGTTATCTTAACAACTGTCTA 58.609 34.615 0.00 0.00 0.00 2.59
5685 8237 7.333423 TGCATGGTTATCTTAACAACTGTCTAC 59.667 37.037 0.00 0.00 0.00 2.59
5686 8238 7.333423 GCATGGTTATCTTAACAACTGTCTACA 59.667 37.037 0.00 0.00 0.00 2.74
5710 8262 8.730680 ACAGTATTATAAGCAAAGTGAAGTTGG 58.269 33.333 0.00 0.00 0.00 3.77
5711 8263 8.184192 CAGTATTATAAGCAAAGTGAAGTTGGG 58.816 37.037 0.00 0.00 0.00 4.12
5712 8264 8.107095 AGTATTATAAGCAAAGTGAAGTTGGGA 58.893 33.333 0.00 0.00 0.00 4.37
5713 8265 6.569179 TTATAAGCAAAGTGAAGTTGGGAC 57.431 37.500 0.00 0.00 0.00 4.46
5714 8266 2.736670 AGCAAAGTGAAGTTGGGACT 57.263 45.000 0.00 0.00 37.87 3.85
5715 8267 3.857157 AGCAAAGTGAAGTTGGGACTA 57.143 42.857 0.00 0.00 34.21 2.59
5716 8268 4.373156 AGCAAAGTGAAGTTGGGACTAT 57.627 40.909 0.00 0.00 34.21 2.12
5717 8269 4.327680 AGCAAAGTGAAGTTGGGACTATC 58.672 43.478 0.00 0.00 34.21 2.08
5718 8270 3.440522 GCAAAGTGAAGTTGGGACTATCC 59.559 47.826 0.00 0.00 34.21 2.59
5719 8271 4.807643 GCAAAGTGAAGTTGGGACTATCCT 60.808 45.833 0.00 0.00 36.57 3.24
5720 8272 5.316987 CAAAGTGAAGTTGGGACTATCCTT 58.683 41.667 0.00 0.00 36.57 3.36
5721 8273 6.472887 CAAAGTGAAGTTGGGACTATCCTTA 58.527 40.000 0.00 0.00 36.57 2.69
5722 8274 6.697641 AAGTGAAGTTGGGACTATCCTTAA 57.302 37.500 0.00 0.00 36.57 1.85
5723 8275 6.893020 AGTGAAGTTGGGACTATCCTTAAT 57.107 37.500 0.00 0.00 36.57 1.40
5724 8276 7.272144 AGTGAAGTTGGGACTATCCTTAATT 57.728 36.000 0.00 0.00 36.57 1.40
5725 8277 7.339482 AGTGAAGTTGGGACTATCCTTAATTC 58.661 38.462 0.00 0.16 36.57 2.17
5726 8278 7.182930 AGTGAAGTTGGGACTATCCTTAATTCT 59.817 37.037 0.00 0.00 36.57 2.40
5727 8279 8.483758 GTGAAGTTGGGACTATCCTTAATTCTA 58.516 37.037 0.00 0.00 36.57 2.10
5728 8280 8.705594 TGAAGTTGGGACTATCCTTAATTCTAG 58.294 37.037 0.00 0.00 36.57 2.43
5729 8281 7.619512 AGTTGGGACTATCCTTAATTCTAGG 57.380 40.000 0.99 0.99 36.57 3.02
5730 8282 7.371043 AGTTGGGACTATCCTTAATTCTAGGA 58.629 38.462 10.68 10.68 45.45 2.94
5731 8283 7.290481 AGTTGGGACTATCCTTAATTCTAGGAC 59.710 40.741 10.53 0.61 44.25 3.85
5732 8284 6.082707 TGGGACTATCCTTAATTCTAGGACC 58.917 44.000 10.53 7.89 44.25 4.46
5733 8285 5.484644 GGGACTATCCTTAATTCTAGGACCC 59.515 48.000 10.53 12.01 44.25 4.46
5734 8286 6.324544 GGACTATCCTTAATTCTAGGACCCT 58.675 44.000 10.53 0.00 44.25 4.34
5735 8287 7.477008 GGACTATCCTTAATTCTAGGACCCTA 58.523 42.308 10.53 0.00 44.25 3.53
5736 8288 7.954620 GGACTATCCTTAATTCTAGGACCCTAA 59.045 40.741 10.53 0.00 44.25 2.69
5737 8289 8.959676 ACTATCCTTAATTCTAGGACCCTAAG 57.040 38.462 10.53 7.04 44.25 2.18
5738 8290 8.744365 ACTATCCTTAATTCTAGGACCCTAAGA 58.256 37.037 10.53 0.00 44.25 2.10
5739 8291 9.250246 CTATCCTTAATTCTAGGACCCTAAGAG 57.750 40.741 10.53 0.00 44.25 2.85
5740 8292 5.839606 TCCTTAATTCTAGGACCCTAAGAGC 59.160 44.000 5.36 0.00 36.88 4.09
5741 8293 5.602978 CCTTAATTCTAGGACCCTAAGAGCA 59.397 44.000 1.14 0.00 34.56 4.26
5742 8294 6.271159 CCTTAATTCTAGGACCCTAAGAGCAT 59.729 42.308 1.14 0.00 34.56 3.79
5743 8295 5.816955 AATTCTAGGACCCTAAGAGCATC 57.183 43.478 0.00 0.00 0.00 3.91
5754 8306 4.852962 GAGCATCTCCAGCCACTC 57.147 61.111 0.00 0.00 0.00 3.51
5755 8307 1.227205 GAGCATCTCCAGCCACTCG 60.227 63.158 0.00 0.00 0.00 4.18
5756 8308 1.954362 GAGCATCTCCAGCCACTCGT 61.954 60.000 0.00 0.00 0.00 4.18
5757 8309 1.520342 GCATCTCCAGCCACTCGTC 60.520 63.158 0.00 0.00 0.00 4.20
5758 8310 1.893062 CATCTCCAGCCACTCGTCA 59.107 57.895 0.00 0.00 0.00 4.35
5759 8311 0.247460 CATCTCCAGCCACTCGTCAA 59.753 55.000 0.00 0.00 0.00 3.18
5760 8312 0.247736 ATCTCCAGCCACTCGTCAAC 59.752 55.000 0.00 0.00 0.00 3.18
5761 8313 1.112916 TCTCCAGCCACTCGTCAACA 61.113 55.000 0.00 0.00 0.00 3.33
5762 8314 0.668706 CTCCAGCCACTCGTCAACAG 60.669 60.000 0.00 0.00 0.00 3.16
5763 8315 1.112916 TCCAGCCACTCGTCAACAGA 61.113 55.000 0.00 0.00 0.00 3.41
5764 8316 0.946221 CCAGCCACTCGTCAACAGAC 60.946 60.000 0.00 0.00 0.00 3.51
5765 8317 0.946221 CAGCCACTCGTCAACAGACC 60.946 60.000 0.00 0.00 0.00 3.85
5766 8318 1.668151 GCCACTCGTCAACAGACCC 60.668 63.158 0.00 0.00 0.00 4.46
5767 8319 1.004918 CCACTCGTCAACAGACCCC 60.005 63.158 0.00 0.00 0.00 4.95
5768 8320 1.472662 CCACTCGTCAACAGACCCCT 61.473 60.000 0.00 0.00 0.00 4.79
5769 8321 1.254026 CACTCGTCAACAGACCCCTA 58.746 55.000 0.00 0.00 0.00 3.53
5770 8322 1.616865 CACTCGTCAACAGACCCCTAA 59.383 52.381 0.00 0.00 0.00 2.69
5771 8323 2.036733 CACTCGTCAACAGACCCCTAAA 59.963 50.000 0.00 0.00 0.00 1.85
5772 8324 2.036862 ACTCGTCAACAGACCCCTAAAC 59.963 50.000 0.00 0.00 0.00 2.01
5773 8325 1.345415 TCGTCAACAGACCCCTAAACC 59.655 52.381 0.00 0.00 0.00 3.27
5774 8326 1.609841 CGTCAACAGACCCCTAAACCC 60.610 57.143 0.00 0.00 0.00 4.11
5775 8327 1.703513 GTCAACAGACCCCTAAACCCT 59.296 52.381 0.00 0.00 0.00 4.34
5776 8328 2.908351 GTCAACAGACCCCTAAACCCTA 59.092 50.000 0.00 0.00 0.00 3.53
5777 8329 3.328637 GTCAACAGACCCCTAAACCCTAA 59.671 47.826 0.00 0.00 0.00 2.69
5778 8330 3.982052 TCAACAGACCCCTAAACCCTAAA 59.018 43.478 0.00 0.00 0.00 1.85
5779 8331 4.077108 CAACAGACCCCTAAACCCTAAAC 58.923 47.826 0.00 0.00 0.00 2.01
5854 8406 0.602905 CAGGTCCTCGTTTTTCGCCT 60.603 55.000 0.00 0.00 39.67 5.52
5886 8438 0.034863 ATAACAACCGGCGAACCCAT 60.035 50.000 9.30 0.00 0.00 4.00
6008 8584 2.824041 CATTGCCGACCCCCTTCG 60.824 66.667 0.00 0.00 38.80 3.79
6034 8613 3.797353 GCTCCCGCCATTCTCCCA 61.797 66.667 0.00 0.00 0.00 4.37
6070 8649 1.878522 CGCCGAAGAAGTATGCGCT 60.879 57.895 9.73 0.00 38.69 5.92
6106 8689 2.668212 TTCCGTCCAGCCAAAGCG 60.668 61.111 0.00 0.00 46.67 4.68
6204 8788 4.077184 GGTCACCACCGATCGGCA 62.077 66.667 33.62 10.05 39.32 5.69
6264 8881 3.394836 GCAGGAGGACCTTCCGCT 61.395 66.667 0.11 0.00 45.36 5.52
6265 8882 2.581354 CAGGAGGACCTTCCGCTG 59.419 66.667 0.00 0.00 45.36 5.18
6266 8883 1.984570 CAGGAGGACCTTCCGCTGA 60.985 63.158 0.00 0.00 45.36 4.26
6267 8884 1.684049 AGGAGGACCTTCCGCTGAG 60.684 63.158 0.00 0.00 45.36 3.35
6324 8941 2.507992 GCAGAGCATCGCGTCACT 60.508 61.111 5.77 0.90 42.67 3.41
6339 8956 1.000163 GTCACTCAGCCAACTTCTCGA 60.000 52.381 0.00 0.00 0.00 4.04
6343 8960 1.270826 CTCAGCCAACTTCTCGACTCA 59.729 52.381 0.00 0.00 0.00 3.41
6344 8961 1.000163 TCAGCCAACTTCTCGACTCAC 60.000 52.381 0.00 0.00 0.00 3.51
6345 8962 0.318762 AGCCAACTTCTCGACTCACC 59.681 55.000 0.00 0.00 0.00 4.02
6346 8963 0.318762 GCCAACTTCTCGACTCACCT 59.681 55.000 0.00 0.00 0.00 4.00
6347 8964 1.544691 GCCAACTTCTCGACTCACCTA 59.455 52.381 0.00 0.00 0.00 3.08
6348 8965 2.166664 GCCAACTTCTCGACTCACCTAT 59.833 50.000 0.00 0.00 0.00 2.57
6349 8966 3.735514 GCCAACTTCTCGACTCACCTATC 60.736 52.174 0.00 0.00 0.00 2.08
6350 8967 3.444034 CCAACTTCTCGACTCACCTATCA 59.556 47.826 0.00 0.00 0.00 2.15
6351 8968 4.416620 CAACTTCTCGACTCACCTATCAC 58.583 47.826 0.00 0.00 0.00 3.06
6352 8969 3.958018 ACTTCTCGACTCACCTATCACT 58.042 45.455 0.00 0.00 0.00 3.41
6353 8970 5.100344 ACTTCTCGACTCACCTATCACTA 57.900 43.478 0.00 0.00 0.00 2.74
6354 8971 4.877251 ACTTCTCGACTCACCTATCACTAC 59.123 45.833 0.00 0.00 0.00 2.73
6355 8972 4.482952 TCTCGACTCACCTATCACTACA 57.517 45.455 0.00 0.00 0.00 2.74
6356 8973 4.443621 TCTCGACTCACCTATCACTACAG 58.556 47.826 0.00 0.00 0.00 2.74
6357 8974 3.542648 TCGACTCACCTATCACTACAGG 58.457 50.000 0.00 0.00 37.97 4.00
6358 8975 3.199289 TCGACTCACCTATCACTACAGGA 59.801 47.826 0.00 0.00 35.76 3.86
6359 8976 3.945921 CGACTCACCTATCACTACAGGAA 59.054 47.826 0.00 0.00 35.76 3.36
6360 8977 4.398358 CGACTCACCTATCACTACAGGAAA 59.602 45.833 0.00 0.00 35.76 3.13
6361 8978 5.652518 GACTCACCTATCACTACAGGAAAC 58.347 45.833 0.00 0.00 35.76 2.78
6362 8979 5.084519 ACTCACCTATCACTACAGGAAACA 58.915 41.667 0.00 0.00 35.76 2.83
6363 8980 5.186021 ACTCACCTATCACTACAGGAAACAG 59.814 44.000 0.00 0.00 35.76 3.16
6364 8981 4.081642 TCACCTATCACTACAGGAAACAGC 60.082 45.833 0.00 0.00 35.76 4.40
6365 8982 4.081420 CACCTATCACTACAGGAAACAGCT 60.081 45.833 0.00 0.00 35.76 4.24
6366 8983 5.127194 CACCTATCACTACAGGAAACAGCTA 59.873 44.000 0.00 0.00 35.76 3.32
6367 8984 5.900123 ACCTATCACTACAGGAAACAGCTAT 59.100 40.000 0.00 0.00 35.76 2.97
6368 8985 6.384305 ACCTATCACTACAGGAAACAGCTATT 59.616 38.462 0.00 0.00 35.76 1.73
6369 8986 7.092846 ACCTATCACTACAGGAAACAGCTATTT 60.093 37.037 0.00 0.00 35.76 1.40
6370 8987 7.770897 CCTATCACTACAGGAAACAGCTATTTT 59.229 37.037 0.00 0.00 33.42 1.82
6371 8988 6.801539 TCACTACAGGAAACAGCTATTTTG 57.198 37.500 0.00 0.00 0.00 2.44
6372 8989 5.181245 TCACTACAGGAAACAGCTATTTTGC 59.819 40.000 0.00 0.00 0.00 3.68
6373 8990 3.942130 ACAGGAAACAGCTATTTTGCC 57.058 42.857 7.60 0.00 0.00 4.52
6374 8991 2.228822 ACAGGAAACAGCTATTTTGCCG 59.771 45.455 7.60 1.80 0.00 5.69
6375 8992 2.228822 CAGGAAACAGCTATTTTGCCGT 59.771 45.455 7.60 0.00 0.00 5.68
6376 8993 2.488153 AGGAAACAGCTATTTTGCCGTC 59.512 45.455 7.60 0.00 0.00 4.79
6377 8994 2.415491 GGAAACAGCTATTTTGCCGTCC 60.415 50.000 0.00 0.00 0.00 4.79
6378 8995 0.802494 AACAGCTATTTTGCCGTCCG 59.198 50.000 0.00 0.00 0.00 4.79
6379 8996 1.062525 CAGCTATTTTGCCGTCCGC 59.937 57.895 0.00 0.00 38.31 5.54
6380 8997 2.112815 AGCTATTTTGCCGTCCGCC 61.113 57.895 0.00 0.00 36.24 6.13
6381 8998 2.403378 GCTATTTTGCCGTCCGCCA 61.403 57.895 0.00 0.00 36.24 5.69
6382 8999 1.427819 CTATTTTGCCGTCCGCCAC 59.572 57.895 0.00 0.00 36.24 5.01
6430 9047 4.103103 GCGGACGGCAAAAGGCTC 62.103 66.667 0.00 0.00 44.01 4.70
6431 9048 3.431725 CGGACGGCAAAAGGCTCC 61.432 66.667 0.00 0.00 44.01 4.70
6433 9050 3.431725 GACGGCAAAAGGCTCCGG 61.432 66.667 15.66 0.00 46.78 5.14
6436 9053 3.302344 GGCAAAAGGCTCCGGCAA 61.302 61.111 0.00 0.00 44.01 4.52
6437 9054 2.733945 GCAAAAGGCTCCGGCAAA 59.266 55.556 0.00 0.00 40.87 3.68
6438 9055 1.373371 GCAAAAGGCTCCGGCAAAG 60.373 57.895 0.00 0.00 40.87 2.77
6439 9056 2.041153 CAAAAGGCTCCGGCAAAGT 58.959 52.632 0.00 0.00 40.87 2.66
6440 9057 1.243902 CAAAAGGCTCCGGCAAAGTA 58.756 50.000 0.00 0.00 40.87 2.24
6441 9058 1.200020 CAAAAGGCTCCGGCAAAGTAG 59.800 52.381 0.00 0.00 40.87 2.57
6442 9059 0.322546 AAAGGCTCCGGCAAAGTAGG 60.323 55.000 0.00 0.00 40.87 3.18
6443 9060 2.821679 AAGGCTCCGGCAAAGTAGGC 62.822 60.000 0.00 0.00 40.87 3.93
6444 9061 2.269241 GCTCCGGCAAAGTAGGCT 59.731 61.111 0.00 0.00 38.54 4.58
6445 9062 1.520666 GCTCCGGCAAAGTAGGCTA 59.479 57.895 0.00 0.00 38.54 3.93
6446 9063 0.810426 GCTCCGGCAAAGTAGGCTAC 60.810 60.000 16.93 16.93 38.54 3.58
6447 9064 0.527817 CTCCGGCAAAGTAGGCTACG 60.528 60.000 18.41 6.37 0.00 3.51
6448 9065 1.520787 CCGGCAAAGTAGGCTACGG 60.521 63.158 18.41 11.37 0.00 4.02
6449 9066 1.217244 CGGCAAAGTAGGCTACGGT 59.783 57.895 18.41 8.42 0.00 4.83
6450 9067 0.457035 CGGCAAAGTAGGCTACGGTA 59.543 55.000 18.41 0.00 0.00 4.02
6451 9068 1.135024 CGGCAAAGTAGGCTACGGTAA 60.135 52.381 18.41 0.00 0.00 2.85
6452 9069 2.674747 CGGCAAAGTAGGCTACGGTAAA 60.675 50.000 18.41 0.00 0.00 2.01
6453 9070 2.674852 GGCAAAGTAGGCTACGGTAAAC 59.325 50.000 18.41 7.75 0.00 2.01
6454 9071 3.328505 GCAAAGTAGGCTACGGTAAACA 58.671 45.455 18.41 0.00 0.00 2.83
6455 9072 3.937079 GCAAAGTAGGCTACGGTAAACAT 59.063 43.478 18.41 0.00 0.00 2.71
6456 9073 4.393990 GCAAAGTAGGCTACGGTAAACATT 59.606 41.667 18.41 2.60 0.00 2.71
6457 9074 5.672819 GCAAAGTAGGCTACGGTAAACATTG 60.673 44.000 18.41 13.99 0.00 2.82
6458 9075 3.528532 AGTAGGCTACGGTAAACATTGC 58.471 45.455 18.41 0.00 0.00 3.56
6459 9076 1.746470 AGGCTACGGTAAACATTGCC 58.254 50.000 5.89 5.89 39.19 4.52
6460 9077 1.280998 AGGCTACGGTAAACATTGCCT 59.719 47.619 9.77 9.77 43.61 4.75
6461 9078 2.089201 GGCTACGGTAAACATTGCCTT 58.911 47.619 6.60 0.00 36.32 4.35
6462 9079 2.490509 GGCTACGGTAAACATTGCCTTT 59.509 45.455 6.60 0.00 36.32 3.11
6463 9080 3.498082 GCTACGGTAAACATTGCCTTTG 58.502 45.455 0.00 0.00 32.69 2.77
6464 9081 2.432206 ACGGTAAACATTGCCTTTGC 57.568 45.000 0.00 0.00 32.69 3.68
6465 9082 1.000394 ACGGTAAACATTGCCTTTGCC 60.000 47.619 0.00 0.00 36.33 4.52
6466 9083 1.708822 GGTAAACATTGCCTTTGCCG 58.291 50.000 0.00 0.00 36.33 5.69
6467 9084 1.000394 GGTAAACATTGCCTTTGCCGT 60.000 47.619 0.00 0.00 36.33 5.68
6468 9085 2.324860 GTAAACATTGCCTTTGCCGTC 58.675 47.619 0.00 0.00 36.33 4.79
6469 9086 1.039856 AAACATTGCCTTTGCCGTCT 58.960 45.000 0.00 0.00 36.33 4.18
6470 9087 0.314935 AACATTGCCTTTGCCGTCTG 59.685 50.000 0.00 0.00 36.33 3.51
6471 9088 1.444895 CATTGCCTTTGCCGTCTGC 60.445 57.895 0.00 0.00 41.77 4.26
6472 9089 1.604593 ATTGCCTTTGCCGTCTGCT 60.605 52.632 0.00 0.00 42.00 4.24
6473 9090 1.181098 ATTGCCTTTGCCGTCTGCTT 61.181 50.000 0.00 0.00 42.00 3.91
6474 9091 1.391157 TTGCCTTTGCCGTCTGCTTT 61.391 50.000 0.00 0.00 42.00 3.51
6475 9092 1.363807 GCCTTTGCCGTCTGCTTTT 59.636 52.632 0.00 0.00 42.00 2.27
6476 9093 0.249447 GCCTTTGCCGTCTGCTTTTT 60.249 50.000 0.00 0.00 42.00 1.94
6477 9094 1.000717 GCCTTTGCCGTCTGCTTTTTA 60.001 47.619 0.00 0.00 42.00 1.52
6478 9095 2.352715 GCCTTTGCCGTCTGCTTTTTAT 60.353 45.455 0.00 0.00 42.00 1.40
6479 9096 3.244976 CCTTTGCCGTCTGCTTTTTATG 58.755 45.455 0.00 0.00 42.00 1.90
6480 9097 3.244976 CTTTGCCGTCTGCTTTTTATGG 58.755 45.455 0.00 0.00 42.00 2.74
6481 9098 0.525761 TGCCGTCTGCTTTTTATGGC 59.474 50.000 0.00 0.00 44.12 4.40
6482 9099 0.523335 GCCGTCTGCTTTTTATGGCG 60.523 55.000 0.00 0.00 35.70 5.69
6483 9100 0.098728 CCGTCTGCTTTTTATGGCGG 59.901 55.000 0.00 0.00 36.28 6.13
6484 9101 1.083489 CGTCTGCTTTTTATGGCGGA 58.917 50.000 0.00 0.00 40.92 5.54
6486 9103 1.083489 TCTGCTTTTTATGGCGGACG 58.917 50.000 0.00 0.00 38.69 4.79
6487 9104 0.098728 CTGCTTTTTATGGCGGACGG 59.901 55.000 0.00 0.00 37.02 4.79
6488 9105 1.226575 GCTTTTTATGGCGGACGGC 60.227 57.895 11.56 11.56 42.51 5.68
6496 9113 3.119096 GGCGGACGGCAAAGAGTC 61.119 66.667 13.57 0.00 46.16 3.36
6509 9126 2.481289 AAGAGTCCTTTGCCTACAGC 57.519 50.000 0.00 0.00 44.14 4.40
6527 9144 4.388499 GGCGGACGGCAAAGAGGA 62.388 66.667 13.57 0.00 46.16 3.71
6528 9145 2.815647 GCGGACGGCAAAGAGGAG 60.816 66.667 0.00 0.00 42.87 3.69
6529 9146 2.125512 CGGACGGCAAAGAGGAGG 60.126 66.667 0.00 0.00 0.00 4.30
6530 9147 2.269241 GGACGGCAAAGAGGAGGG 59.731 66.667 0.00 0.00 0.00 4.30
6531 9148 2.291043 GGACGGCAAAGAGGAGGGA 61.291 63.158 0.00 0.00 0.00 4.20
6532 9149 1.079057 GACGGCAAAGAGGAGGGAC 60.079 63.158 0.00 0.00 0.00 4.46
6533 9150 2.125512 CGGCAAAGAGGAGGGACG 60.126 66.667 0.00 0.00 0.00 4.79
6534 9151 2.269241 GGCAAAGAGGAGGGACGG 59.731 66.667 0.00 0.00 0.00 4.79
6535 9152 2.436824 GCAAAGAGGAGGGACGGC 60.437 66.667 0.00 0.00 0.00 5.68
6536 9153 3.068881 CAAAGAGGAGGGACGGCA 58.931 61.111 0.00 0.00 0.00 5.69
6537 9154 1.374947 CAAAGAGGAGGGACGGCAA 59.625 57.895 0.00 0.00 0.00 4.52
6538 9155 0.250727 CAAAGAGGAGGGACGGCAAA 60.251 55.000 0.00 0.00 0.00 3.68
6539 9156 0.476771 AAAGAGGAGGGACGGCAAAA 59.523 50.000 0.00 0.00 0.00 2.44
6540 9157 0.476771 AAGAGGAGGGACGGCAAAAA 59.523 50.000 0.00 0.00 0.00 1.94
6541 9158 0.698818 AGAGGAGGGACGGCAAAAAT 59.301 50.000 0.00 0.00 0.00 1.82
6542 9159 1.913419 AGAGGAGGGACGGCAAAAATA 59.087 47.619 0.00 0.00 0.00 1.40
6543 9160 2.014857 GAGGAGGGACGGCAAAAATAC 58.985 52.381 0.00 0.00 0.00 1.89
6544 9161 1.633945 AGGAGGGACGGCAAAAATACT 59.366 47.619 0.00 0.00 0.00 2.12
6545 9162 1.743394 GGAGGGACGGCAAAAATACTG 59.257 52.381 0.00 0.00 0.00 2.74
6546 9163 1.743394 GAGGGACGGCAAAAATACTGG 59.257 52.381 0.00 0.00 0.00 4.00
6547 9164 1.353022 AGGGACGGCAAAAATACTGGA 59.647 47.619 0.00 0.00 0.00 3.86
6548 9165 1.471287 GGGACGGCAAAAATACTGGAC 59.529 52.381 0.00 0.00 0.00 4.02
6549 9166 1.129811 GGACGGCAAAAATACTGGACG 59.870 52.381 0.00 0.00 0.00 4.79
6550 9167 1.802365 GACGGCAAAAATACTGGACGT 59.198 47.619 0.00 0.00 35.89 4.34
6551 9168 1.802365 ACGGCAAAAATACTGGACGTC 59.198 47.619 7.13 7.13 0.00 4.34
6552 9169 1.129811 CGGCAAAAATACTGGACGTCC 59.870 52.381 28.17 28.17 0.00 4.79
6553 9170 1.129811 GGCAAAAATACTGGACGTCCG 59.870 52.381 28.70 23.92 39.43 4.79
6554 9171 1.465187 GCAAAAATACTGGACGTCCGC 60.465 52.381 28.70 18.35 39.43 5.54
6555 9172 1.129811 CAAAAATACTGGACGTCCGCC 59.870 52.381 28.70 7.52 39.43 6.13
6556 9173 0.322322 AAAATACTGGACGTCCGCCA 59.678 50.000 28.70 16.32 39.43 5.69
6562 9179 4.424566 GGACGTCCGCCAGCGTTA 62.425 66.667 20.85 0.00 41.70 3.18
6563 9180 2.879462 GACGTCCGCCAGCGTTAG 60.879 66.667 11.55 4.00 41.70 2.34
6564 9181 3.621892 GACGTCCGCCAGCGTTAGT 62.622 63.158 11.55 7.21 41.70 2.24
6565 9182 2.879462 CGTCCGCCAGCGTTAGTC 60.879 66.667 11.55 0.00 37.81 2.59
6566 9183 2.508663 GTCCGCCAGCGTTAGTCC 60.509 66.667 11.55 0.00 37.81 3.85
6567 9184 4.124351 TCCGCCAGCGTTAGTCCG 62.124 66.667 11.55 0.00 37.81 4.79
6568 9185 4.430765 CCGCCAGCGTTAGTCCGT 62.431 66.667 11.55 0.00 37.81 4.69
6569 9186 2.431942 CGCCAGCGTTAGTCCGTT 60.432 61.111 3.35 0.00 34.35 4.44
6570 9187 1.153978 CGCCAGCGTTAGTCCGTTA 60.154 57.895 3.35 0.00 34.35 3.18
6571 9188 1.138047 CGCCAGCGTTAGTCCGTTAG 61.138 60.000 3.35 0.00 34.35 2.34
6572 9189 0.804933 GCCAGCGTTAGTCCGTTAGG 60.805 60.000 0.00 0.00 39.46 2.69
6573 9190 0.804933 CCAGCGTTAGTCCGTTAGGC 60.805 60.000 0.00 0.00 37.47 3.93
6574 9191 1.138047 CAGCGTTAGTCCGTTAGGCG 61.138 60.000 0.00 0.00 40.95 5.52
6591 9208 3.810896 GGCTAACGGCGGCCTTTG 61.811 66.667 19.85 12.94 44.48 2.77
6592 9209 4.476410 GCTAACGGCGGCCTTTGC 62.476 66.667 19.85 17.87 0.00 3.68
6619 9236 4.458164 GCGGACGGCAAATTTGAG 57.542 55.556 22.31 15.93 42.87 3.02
6620 9237 1.801512 GCGGACGGCAAATTTGAGC 60.802 57.895 22.31 7.16 42.87 4.26
6621 9238 1.511887 CGGACGGCAAATTTGAGCG 60.512 57.895 22.31 10.15 0.00 5.03
6622 9239 1.801512 GGACGGCAAATTTGAGCGC 60.802 57.895 22.31 0.00 0.00 5.92
6623 9240 1.801512 GACGGCAAATTTGAGCGCC 60.802 57.895 22.31 14.10 41.30 6.53
6624 9241 2.200170 GACGGCAAATTTGAGCGCCT 62.200 55.000 22.31 5.78 42.59 5.52
6625 9242 1.514873 CGGCAAATTTGAGCGCCTC 60.515 57.895 22.31 1.22 42.59 4.70
6626 9243 1.885871 GGCAAATTTGAGCGCCTCT 59.114 52.632 22.31 0.00 41.50 3.69
6627 9244 0.244721 GGCAAATTTGAGCGCCTCTT 59.755 50.000 22.31 0.00 41.50 2.85
6628 9245 1.337167 GGCAAATTTGAGCGCCTCTTT 60.337 47.619 22.31 0.00 41.50 2.52
6629 9246 1.723003 GCAAATTTGAGCGCCTCTTTG 59.277 47.619 22.31 8.83 31.08 2.77
6630 9247 1.723003 CAAATTTGAGCGCCTCTTTGC 59.277 47.619 13.08 0.00 0.00 3.68
6631 9248 0.244721 AATTTGAGCGCCTCTTTGCC 59.755 50.000 2.29 0.00 0.00 4.52
6632 9249 1.926511 ATTTGAGCGCCTCTTTGCCG 61.927 55.000 2.29 0.00 0.00 5.69
6633 9250 3.825160 TTGAGCGCCTCTTTGCCGT 62.825 57.895 2.29 0.00 0.00 5.68
6634 9251 3.491652 GAGCGCCTCTTTGCCGTC 61.492 66.667 2.29 0.00 0.00 4.79
6639 9256 4.697756 CCTCTTTGCCGTCCGCCA 62.698 66.667 0.00 0.00 36.24 5.69
6640 9257 3.121030 CTCTTTGCCGTCCGCCAG 61.121 66.667 0.00 0.00 36.24 4.85
6641 9258 3.883744 CTCTTTGCCGTCCGCCAGT 62.884 63.158 0.00 0.00 36.24 4.00
6642 9259 2.978010 CTTTGCCGTCCGCCAGTT 60.978 61.111 0.00 0.00 36.24 3.16
6643 9260 3.254014 CTTTGCCGTCCGCCAGTTG 62.254 63.158 0.00 0.00 36.24 3.16
6644 9261 3.758973 TTTGCCGTCCGCCAGTTGA 62.759 57.895 0.00 0.00 36.24 3.18
6645 9262 4.980805 TGCCGTCCGCCAGTTGAC 62.981 66.667 0.00 0.00 36.24 3.18
6648 9265 3.103911 CGTCCGCCAGTTGACGTC 61.104 66.667 9.11 9.11 46.83 4.34
6649 9266 2.028484 GTCCGCCAGTTGACGTCA 59.972 61.111 15.76 15.76 0.00 4.35
6650 9267 2.022129 GTCCGCCAGTTGACGTCAG 61.022 63.158 19.11 8.28 0.00 3.51
6651 9268 3.414700 CCGCCAGTTGACGTCAGC 61.415 66.667 23.14 23.14 0.00 4.26
6652 9269 2.661537 CGCCAGTTGACGTCAGCA 60.662 61.111 30.23 10.50 0.00 4.41
6653 9270 2.243957 CGCCAGTTGACGTCAGCAA 61.244 57.895 30.23 9.74 0.00 3.91
6654 9271 1.568612 CGCCAGTTGACGTCAGCAAT 61.569 55.000 30.23 11.37 0.00 3.56
6655 9272 0.110056 GCCAGTTGACGTCAGCAATG 60.110 55.000 30.23 21.11 0.00 2.82
6656 9273 0.110056 CCAGTTGACGTCAGCAATGC 60.110 55.000 30.23 12.92 0.00 3.56
6657 9274 0.451628 CAGTTGACGTCAGCAATGCG 60.452 55.000 30.23 11.96 0.00 4.73
6658 9275 0.880278 AGTTGACGTCAGCAATGCGT 60.880 50.000 30.23 9.23 41.81 5.24
6661 9278 3.554232 ACGTCAGCAATGCGTCAG 58.446 55.556 0.00 0.00 33.22 3.51
6662 9279 2.097160 CGTCAGCAATGCGTCAGC 59.903 61.111 0.00 0.00 45.41 4.26
6707 9324 3.972276 GCGGACGGCAAAGGCAAA 61.972 61.111 0.00 0.00 43.71 3.68
6708 9325 2.255252 CGGACGGCAAAGGCAAAG 59.745 61.111 0.00 0.00 43.71 2.77
6709 9326 2.551912 CGGACGGCAAAGGCAAAGT 61.552 57.895 0.00 0.00 43.71 2.66
6710 9327 1.285950 GGACGGCAAAGGCAAAGTC 59.714 57.895 0.00 0.00 43.71 3.01
6711 9328 1.172812 GGACGGCAAAGGCAAAGTCT 61.173 55.000 0.00 0.00 43.71 3.24
6712 9329 0.668535 GACGGCAAAGGCAAAGTCTT 59.331 50.000 0.00 0.00 43.71 3.01
6713 9330 1.067060 GACGGCAAAGGCAAAGTCTTT 59.933 47.619 0.00 0.00 43.71 2.52
6724 9341 3.655276 CAAAGTCTTTGCCATCAGCTT 57.345 42.857 12.26 0.00 44.23 3.74
6725 9342 4.771590 CAAAGTCTTTGCCATCAGCTTA 57.228 40.909 12.26 0.00 44.23 3.09
6726 9343 4.730657 CAAAGTCTTTGCCATCAGCTTAG 58.269 43.478 12.26 0.00 44.23 2.18
6727 9344 2.363683 AGTCTTTGCCATCAGCTTAGC 58.636 47.619 0.00 0.00 44.23 3.09
6728 9345 2.026449 AGTCTTTGCCATCAGCTTAGCT 60.026 45.455 0.00 0.00 44.23 3.32
6729 9346 2.751806 GTCTTTGCCATCAGCTTAGCTT 59.248 45.455 3.00 0.00 44.23 3.74
6730 9347 3.192212 GTCTTTGCCATCAGCTTAGCTTT 59.808 43.478 3.00 0.00 44.23 3.51
6731 9348 3.192001 TCTTTGCCATCAGCTTAGCTTTG 59.808 43.478 3.00 5.45 44.23 2.77
6732 9349 0.813184 TGCCATCAGCTTAGCTTTGC 59.187 50.000 3.00 5.56 44.23 3.68
6733 9350 0.101939 GCCATCAGCTTAGCTTTGCC 59.898 55.000 3.00 0.00 36.40 4.52
6734 9351 0.379669 CCATCAGCTTAGCTTTGCCG 59.620 55.000 3.00 0.00 36.40 5.69
6735 9352 1.089920 CATCAGCTTAGCTTTGCCGT 58.910 50.000 3.00 0.00 36.40 5.68
6736 9353 1.063174 CATCAGCTTAGCTTTGCCGTC 59.937 52.381 3.00 0.00 36.40 4.79
6737 9354 0.673644 TCAGCTTAGCTTTGCCGTCC 60.674 55.000 3.00 0.00 36.40 4.79
6738 9355 1.741770 AGCTTAGCTTTGCCGTCCG 60.742 57.895 0.00 0.00 33.89 4.79
6739 9356 2.785258 CTTAGCTTTGCCGTCCGC 59.215 61.111 0.00 0.00 38.31 5.54
6740 9357 2.744709 TTAGCTTTGCCGTCCGCC 60.745 61.111 0.00 0.00 36.24 6.13
6741 9358 3.538785 TTAGCTTTGCCGTCCGCCA 62.539 57.895 0.00 0.00 36.24 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 1.623811 ACCACGACTTTAGCATCACCT 59.376 47.619 0.00 0.00 0.00 4.00
71 72 3.771160 GGGCGGATCACCACGACT 61.771 66.667 6.37 0.00 38.41 4.18
96 97 3.319198 GAACTCCCTCCGCCACCA 61.319 66.667 0.00 0.00 0.00 4.17
110 111 3.118592 CCAAGGTCCACTAGAGGATGAAC 60.119 52.174 12.37 0.00 40.42 3.18
120 121 4.077184 CGGCGCCAAGGTCCACTA 62.077 66.667 28.98 0.00 0.00 2.74
137 138 4.767255 CTGGAGAGTGTGGGCGGC 62.767 72.222 0.00 0.00 0.00 6.53
153 154 4.643387 GTGGACGCCAAGGTGCCT 62.643 66.667 12.20 0.00 34.18 4.75
213 215 3.358076 CTTCTGGTCCTCGGTCGCC 62.358 68.421 0.00 0.00 0.00 5.54
215 217 2.182030 GCTTCTGGTCCTCGGTCG 59.818 66.667 0.00 0.00 0.00 4.79
218 220 4.821589 GCGGCTTCTGGTCCTCGG 62.822 72.222 0.00 0.00 0.00 4.63
268 272 2.736721 CGGCGAATTCTTCTTCTGTCAA 59.263 45.455 0.00 0.00 0.00 3.18
287 291 3.063452 CGTGATGATTTCCAACTAACCGG 59.937 47.826 0.00 0.00 0.00 5.28
289 293 4.258543 TCCGTGATGATTTCCAACTAACC 58.741 43.478 0.00 0.00 0.00 2.85
291 295 4.019681 ACCTCCGTGATGATTTCCAACTAA 60.020 41.667 0.00 0.00 0.00 2.24
295 299 2.571653 AGACCTCCGTGATGATTTCCAA 59.428 45.455 0.00 0.00 0.00 3.53
309 313 0.322636 TCTGACGGAGTGAGACCTCC 60.323 60.000 0.00 0.00 44.94 4.30
498 502 4.514569 GCCAATGCGTGCGTACCG 62.515 66.667 0.00 0.00 0.00 4.02
545 549 1.078214 CTCCTTGATGGCTTGGCGA 60.078 57.895 0.00 0.00 35.26 5.54
550 554 0.255318 CAGCTCCTCCTTGATGGCTT 59.745 55.000 0.00 0.00 35.26 4.35
595 599 0.811219 CGAGGCAATGAAGGATGCGA 60.811 55.000 0.00 0.00 43.47 5.10
660 664 4.504916 CTGTGCGCTCCTCCTCGG 62.505 72.222 9.73 0.00 0.00 4.63
688 692 2.954868 CGCTGGTCGTATCGTGCC 60.955 66.667 0.00 0.00 0.00 5.01
693 697 1.693083 GGTGTTGCGCTGGTCGTATC 61.693 60.000 9.73 0.00 41.07 2.24
777 781 4.530857 GATCGAGGGCCCACACGG 62.531 72.222 27.56 5.27 0.00 4.94
778 782 4.873129 CGATCGAGGGCCCACACG 62.873 72.222 27.56 25.11 0.00 4.49
818 822 0.388006 ACCGCAAATTTACGCCTTGC 60.388 50.000 5.24 0.00 41.60 4.01
820 824 1.199097 CTGACCGCAAATTTACGCCTT 59.801 47.619 5.24 0.00 0.00 4.35
826 830 1.136197 CGAACGCTGACCGCAAATTTA 60.136 47.619 0.00 0.00 41.76 1.40
889 893 0.883833 GAGGCCATGACTGTTGTTGG 59.116 55.000 5.01 1.56 0.00 3.77
906 910 1.009829 GGAGCTTGTTACGCCATGAG 58.990 55.000 0.00 0.00 0.00 2.90
907 911 0.323302 TGGAGCTTGTTACGCCATGA 59.677 50.000 0.00 0.00 31.52 3.07
908 912 1.382522 ATGGAGCTTGTTACGCCATG 58.617 50.000 0.29 0.00 44.74 3.66
909 913 3.882131 ATGGAGCTTGTTACGCCAT 57.118 47.368 0.00 0.00 42.12 4.40
949 960 2.431683 GTTCAGCACAGGGCCTGA 59.568 61.111 38.99 14.81 46.50 3.86
954 971 1.302832 GTGGAGGTTCAGCACAGGG 60.303 63.158 0.00 0.00 0.00 4.45
971 988 1.975407 CGTGGAGGACGGTAGGTGT 60.975 63.158 0.00 0.00 44.85 4.16
4213 6761 4.459089 GCTCCACCTCTCACCGCC 62.459 72.222 0.00 0.00 0.00 6.13
4376 6924 6.492007 TTTGCTGATCTGAATTCTGAAGTC 57.508 37.500 17.62 10.67 0.00 3.01
4418 6966 7.854916 GCAGAAATGAACATTGCTCTTATCTAC 59.145 37.037 5.17 0.00 34.47 2.59
4419 6967 7.254556 CGCAGAAATGAACATTGCTCTTATCTA 60.255 37.037 5.17 0.00 34.47 1.98
4442 6990 0.390998 TTGTCGATTCCTGCATCGCA 60.391 50.000 2.57 2.27 44.80 5.10
4458 7006 0.465460 TTGCTTTCCTCGCCACTTGT 60.465 50.000 0.00 0.00 0.00 3.16
4501 7050 1.067669 CTGATCTCGAAATGGCTCGGA 59.932 52.381 0.00 0.00 39.35 4.55
4581 7133 5.055642 ACAACGATCTGACGAGACATTAA 57.944 39.130 0.00 0.00 37.03 1.40
4585 7137 2.034179 ACAACAACGATCTGACGAGACA 59.966 45.455 0.00 0.00 37.03 3.41
4685 7237 1.571460 CAGCCTGTGTTCGTTCTGC 59.429 57.895 0.00 0.00 0.00 4.26
4736 7288 0.955428 GAACCTCTGCGTGCATCCAA 60.955 55.000 0.00 0.00 0.00 3.53
4763 7315 8.531146 GTTTGATGGGAATAGGAAAATTCAGAA 58.469 33.333 0.00 0.00 37.56 3.02
4777 7329 5.536497 AAGGTAAGAGGTTTGATGGGAAT 57.464 39.130 0.00 0.00 0.00 3.01
4778 7330 5.321927 GAAAGGTAAGAGGTTTGATGGGAA 58.678 41.667 0.00 0.00 0.00 3.97
4779 7331 4.263771 GGAAAGGTAAGAGGTTTGATGGGA 60.264 45.833 0.00 0.00 0.00 4.37
4795 7347 2.044793 TCCTGATCCACTGGAAAGGT 57.955 50.000 21.64 0.22 42.27 3.50
4812 7364 1.017177 TAACCAGCGCGTGTTGATCC 61.017 55.000 22.44 0.00 0.00 3.36
4813 7365 0.793861 TTAACCAGCGCGTGTTGATC 59.206 50.000 22.44 0.00 0.00 2.92
4814 7366 1.231221 TTTAACCAGCGCGTGTTGAT 58.769 45.000 22.44 5.43 0.00 2.57
4815 7367 1.069568 CATTTAACCAGCGCGTGTTGA 60.070 47.619 22.44 14.49 0.00 3.18
4816 7368 1.326576 CATTTAACCAGCGCGTGTTG 58.673 50.000 22.44 5.76 0.00 3.33
4817 7369 0.948678 ACATTTAACCAGCGCGTGTT 59.051 45.000 18.98 18.98 0.00 3.32
4861 7413 3.386867 GAAGCGCACTTGGCCATCG 62.387 63.158 6.09 9.60 40.31 3.84
4897 7449 2.507102 AGAATCACGTCTGCCGCG 60.507 61.111 0.00 0.00 41.42 6.46
4900 7452 2.803451 CAGTAGAGAATCACGTCTGCC 58.197 52.381 0.00 0.00 37.82 4.85
4912 7464 1.848652 GGTACCCTGTGCAGTAGAGA 58.151 55.000 0.00 0.00 0.00 3.10
5138 7690 2.669364 CTCTCAAAACAAGCACCATGC 58.331 47.619 0.00 0.00 45.46 4.06
5139 7691 2.034939 TGCTCTCAAAACAAGCACCATG 59.965 45.455 0.00 0.00 40.91 3.66
5140 7692 2.295349 CTGCTCTCAAAACAAGCACCAT 59.705 45.455 0.00 0.00 40.91 3.55
5141 7693 1.677576 CTGCTCTCAAAACAAGCACCA 59.322 47.619 0.00 0.00 40.91 4.17
5142 7694 1.949525 TCTGCTCTCAAAACAAGCACC 59.050 47.619 0.00 0.00 40.91 5.01
5349 7901 3.068024 GGCAAACACCACAAGAATTCAGA 59.932 43.478 8.44 0.00 0.00 3.27
5350 7902 3.068590 AGGCAAACACCACAAGAATTCAG 59.931 43.478 8.44 2.21 0.00 3.02
5351 7903 3.030291 AGGCAAACACCACAAGAATTCA 58.970 40.909 8.44 0.00 0.00 2.57
5352 7904 3.319122 AGAGGCAAACACCACAAGAATTC 59.681 43.478 0.00 0.00 0.00 2.17
5353 7905 3.068590 CAGAGGCAAACACCACAAGAATT 59.931 43.478 0.00 0.00 0.00 2.17
5354 7906 2.624838 CAGAGGCAAACACCACAAGAAT 59.375 45.455 0.00 0.00 0.00 2.40
5374 7926 5.107104 GCAGAATATGTTTTCACGACTGTCA 60.107 40.000 8.73 0.00 0.00 3.58
5381 7933 6.366644 CTGTTTGCAGAATATGTTTTCACG 57.633 37.500 0.00 0.00 45.28 4.35
5399 7951 1.272147 GGAGTCCTGCCCATTCTGTTT 60.272 52.381 0.41 0.00 0.00 2.83
5402 7954 1.500474 TAGGAGTCCTGCCCATTCTG 58.500 55.000 22.69 0.00 34.61 3.02
5411 7963 5.491323 AAAAGACTTCCTTAGGAGTCCTG 57.509 43.478 22.69 5.70 33.51 3.86
5414 7966 7.599621 GTCACTAAAAAGACTTCCTTAGGAGTC 59.400 40.741 17.29 17.29 34.00 3.36
5415 7967 7.290481 AGTCACTAAAAAGACTTCCTTAGGAGT 59.710 37.037 15.99 2.04 42.12 3.85
5425 7977 8.153550 AGACATCATCAGTCACTAAAAAGACTT 58.846 33.333 0.00 0.00 42.87 3.01
5426 7978 7.601886 CAGACATCATCAGTCACTAAAAAGACT 59.398 37.037 0.00 0.00 45.46 3.24
5427 7979 7.600375 TCAGACATCATCAGTCACTAAAAAGAC 59.400 37.037 0.00 0.00 38.46 3.01
5432 7984 6.343703 CCATCAGACATCATCAGTCACTAAA 58.656 40.000 0.00 0.00 38.46 1.85
5437 7989 2.436911 CCCCATCAGACATCATCAGTCA 59.563 50.000 0.00 0.00 38.46 3.41
5492 8044 2.364973 TCCGCCAGCCAGTCCATA 60.365 61.111 0.00 0.00 0.00 2.74
5552 8104 1.730451 GCTGGAGGGCTCTCTCGTAC 61.730 65.000 14.63 0.00 39.86 3.67
5649 8201 8.840321 GTTAAGATAACCATGCAGATACACATT 58.160 33.333 0.00 0.00 0.00 2.71
5656 8208 6.886459 ACAGTTGTTAAGATAACCATGCAGAT 59.114 34.615 0.00 0.00 0.00 2.90
5684 8236 8.730680 CCAACTTCACTTTGCTTATAATACTGT 58.269 33.333 0.00 0.00 0.00 3.55
5685 8237 8.184192 CCCAACTTCACTTTGCTTATAATACTG 58.816 37.037 0.00 0.00 0.00 2.74
5686 8238 8.107095 TCCCAACTTCACTTTGCTTATAATACT 58.893 33.333 0.00 0.00 0.00 2.12
5687 8239 8.182227 GTCCCAACTTCACTTTGCTTATAATAC 58.818 37.037 0.00 0.00 0.00 1.89
5688 8240 8.107095 AGTCCCAACTTCACTTTGCTTATAATA 58.893 33.333 0.00 0.00 28.74 0.98
5689 8241 6.948309 AGTCCCAACTTCACTTTGCTTATAAT 59.052 34.615 0.00 0.00 28.74 1.28
5691 8243 5.876357 AGTCCCAACTTCACTTTGCTTATA 58.124 37.500 0.00 0.00 28.74 0.98
5692 8244 4.729868 AGTCCCAACTTCACTTTGCTTAT 58.270 39.130 0.00 0.00 28.74 1.73
5709 8261 5.484644 GGGTCCTAGAATTAAGGATAGTCCC 59.515 48.000 11.24 12.31 44.79 4.46
5710 8262 6.324544 AGGGTCCTAGAATTAAGGATAGTCC 58.675 44.000 11.24 8.16 44.79 3.85
5711 8263 8.953223 TTAGGGTCCTAGAATTAAGGATAGTC 57.047 38.462 11.24 0.83 44.79 2.59
5712 8264 8.744365 TCTTAGGGTCCTAGAATTAAGGATAGT 58.256 37.037 11.24 3.57 44.79 2.12
5713 8265 9.250246 CTCTTAGGGTCCTAGAATTAAGGATAG 57.750 40.741 11.24 5.98 44.79 2.08
5714 8266 7.674772 GCTCTTAGGGTCCTAGAATTAAGGATA 59.325 40.741 11.24 0.00 44.79 2.59
5715 8267 6.499000 GCTCTTAGGGTCCTAGAATTAAGGAT 59.501 42.308 11.24 0.74 44.79 3.24
5716 8268 5.839606 GCTCTTAGGGTCCTAGAATTAAGGA 59.160 44.000 5.14 5.14 40.92 3.36
5717 8269 5.602978 TGCTCTTAGGGTCCTAGAATTAAGG 59.397 44.000 0.00 0.62 35.26 2.69
5718 8270 6.732896 TGCTCTTAGGGTCCTAGAATTAAG 57.267 41.667 0.00 0.00 0.00 1.85
5719 8271 7.076446 AGATGCTCTTAGGGTCCTAGAATTAA 58.924 38.462 0.00 0.00 0.00 1.40
5720 8272 6.625267 AGATGCTCTTAGGGTCCTAGAATTA 58.375 40.000 0.00 0.00 0.00 1.40
5721 8273 5.472347 AGATGCTCTTAGGGTCCTAGAATT 58.528 41.667 0.00 0.00 0.00 2.17
5722 8274 5.083821 GAGATGCTCTTAGGGTCCTAGAAT 58.916 45.833 0.00 0.00 0.00 2.40
5723 8275 4.475345 GAGATGCTCTTAGGGTCCTAGAA 58.525 47.826 0.00 0.00 0.00 2.10
5724 8276 3.181427 GGAGATGCTCTTAGGGTCCTAGA 60.181 52.174 0.00 0.00 0.00 2.43
5725 8277 3.161866 GGAGATGCTCTTAGGGTCCTAG 58.838 54.545 0.00 0.00 0.00 3.02
5726 8278 2.518407 TGGAGATGCTCTTAGGGTCCTA 59.482 50.000 0.00 0.00 0.00 2.94
5727 8279 1.292242 TGGAGATGCTCTTAGGGTCCT 59.708 52.381 0.00 0.00 0.00 3.85
5728 8280 1.691434 CTGGAGATGCTCTTAGGGTCC 59.309 57.143 0.00 0.00 0.00 4.46
5729 8281 1.069978 GCTGGAGATGCTCTTAGGGTC 59.930 57.143 0.00 0.00 0.00 4.46
5730 8282 1.127343 GCTGGAGATGCTCTTAGGGT 58.873 55.000 0.00 0.00 0.00 4.34
5731 8283 0.396060 GGCTGGAGATGCTCTTAGGG 59.604 60.000 0.00 0.00 0.00 3.53
5732 8284 1.126488 TGGCTGGAGATGCTCTTAGG 58.874 55.000 0.00 0.00 0.00 2.69
5733 8285 1.761784 AGTGGCTGGAGATGCTCTTAG 59.238 52.381 0.00 0.00 0.00 2.18
5734 8286 1.759445 GAGTGGCTGGAGATGCTCTTA 59.241 52.381 0.00 0.00 0.00 2.10
5735 8287 0.540923 GAGTGGCTGGAGATGCTCTT 59.459 55.000 0.00 0.00 0.00 2.85
5736 8288 1.674764 CGAGTGGCTGGAGATGCTCT 61.675 60.000 0.00 0.00 0.00 4.09
5737 8289 1.227205 CGAGTGGCTGGAGATGCTC 60.227 63.158 0.00 0.00 0.00 4.26
5738 8290 1.954362 GACGAGTGGCTGGAGATGCT 61.954 60.000 0.00 0.00 0.00 3.79
5739 8291 1.520342 GACGAGTGGCTGGAGATGC 60.520 63.158 0.00 0.00 0.00 3.91
5740 8292 0.247460 TTGACGAGTGGCTGGAGATG 59.753 55.000 0.00 0.00 0.00 2.90
5741 8293 0.247736 GTTGACGAGTGGCTGGAGAT 59.752 55.000 0.00 0.00 0.00 2.75
5742 8294 1.112916 TGTTGACGAGTGGCTGGAGA 61.113 55.000 0.00 0.00 0.00 3.71
5743 8295 0.668706 CTGTTGACGAGTGGCTGGAG 60.669 60.000 0.00 0.00 0.00 3.86
5744 8296 1.112916 TCTGTTGACGAGTGGCTGGA 61.113 55.000 0.00 0.00 0.00 3.86
5745 8297 0.946221 GTCTGTTGACGAGTGGCTGG 60.946 60.000 0.00 0.00 33.15 4.85
5746 8298 0.946221 GGTCTGTTGACGAGTGGCTG 60.946 60.000 0.00 0.00 43.79 4.85
5747 8299 1.367840 GGTCTGTTGACGAGTGGCT 59.632 57.895 0.00 0.00 43.79 4.75
5748 8300 1.668151 GGGTCTGTTGACGAGTGGC 60.668 63.158 0.00 0.00 43.79 5.01
5749 8301 1.004918 GGGGTCTGTTGACGAGTGG 60.005 63.158 0.00 0.00 43.79 4.00
5750 8302 1.254026 TAGGGGTCTGTTGACGAGTG 58.746 55.000 0.00 0.00 43.79 3.51
5751 8303 2.005370 TTAGGGGTCTGTTGACGAGT 57.995 50.000 0.00 0.00 43.79 4.18
5752 8304 2.612221 GGTTTAGGGGTCTGTTGACGAG 60.612 54.545 0.00 0.00 43.79 4.18
5753 8305 1.345415 GGTTTAGGGGTCTGTTGACGA 59.655 52.381 0.00 0.00 43.79 4.20
5754 8306 1.609841 GGGTTTAGGGGTCTGTTGACG 60.610 57.143 0.00 0.00 43.79 4.35
5755 8307 1.703513 AGGGTTTAGGGGTCTGTTGAC 59.296 52.381 0.00 0.00 42.22 3.18
5756 8308 2.127651 AGGGTTTAGGGGTCTGTTGA 57.872 50.000 0.00 0.00 0.00 3.18
5757 8309 4.077108 GTTTAGGGTTTAGGGGTCTGTTG 58.923 47.826 0.00 0.00 0.00 3.33
5758 8310 3.074985 GGTTTAGGGTTTAGGGGTCTGTT 59.925 47.826 0.00 0.00 0.00 3.16
5759 8311 2.646297 GGTTTAGGGTTTAGGGGTCTGT 59.354 50.000 0.00 0.00 0.00 3.41
5760 8312 2.025605 GGGTTTAGGGTTTAGGGGTCTG 60.026 54.545 0.00 0.00 0.00 3.51
5761 8313 2.281966 GGGTTTAGGGTTTAGGGGTCT 58.718 52.381 0.00 0.00 0.00 3.85
5762 8314 1.285962 GGGGTTTAGGGTTTAGGGGTC 59.714 57.143 0.00 0.00 0.00 4.46
5763 8315 1.131637 AGGGGTTTAGGGTTTAGGGGT 60.132 52.381 0.00 0.00 0.00 4.95
5764 8316 1.567649 GAGGGGTTTAGGGTTTAGGGG 59.432 57.143 0.00 0.00 0.00 4.79
5765 8317 2.241430 CTGAGGGGTTTAGGGTTTAGGG 59.759 54.545 0.00 0.00 0.00 3.53
5766 8318 2.241430 CCTGAGGGGTTTAGGGTTTAGG 59.759 54.545 0.00 0.00 0.00 2.69
5767 8319 3.646736 CCTGAGGGGTTTAGGGTTTAG 57.353 52.381 0.00 0.00 0.00 1.85
5803 8355 0.108851 GGCCATTTTTCGACGCCAAT 60.109 50.000 0.00 0.00 39.50 3.16
5805 8357 2.631580 GGGCCATTTTTCGACGCCA 61.632 57.895 4.39 0.00 41.58 5.69
5808 8360 1.154035 GCTGGGCCATTTTTCGACG 60.154 57.895 6.72 0.00 0.00 5.12
5854 8406 2.036089 GGTTGTTATTTCGGCCCAAACA 59.964 45.455 0.00 0.00 0.00 2.83
5973 8527 4.578871 CAATGGGAAAATGGAGGGAAAAC 58.421 43.478 0.00 0.00 0.00 2.43
6088 8670 2.954611 GCTTTGGCTGGACGGAAC 59.045 61.111 0.00 0.00 35.22 3.62
6204 8788 3.777106 TCTTCATGTTGAGCCTGTTCT 57.223 42.857 0.00 0.00 0.00 3.01
6265 8882 4.767255 CACTGGCCGGCCTGTCTC 62.767 72.222 44.51 21.75 44.68 3.36
6324 8941 1.000163 GTGAGTCGAGAAGTTGGCTGA 60.000 52.381 0.00 0.00 0.00 4.26
6339 8956 5.084519 TGTTTCCTGTAGTGATAGGTGAGT 58.915 41.667 0.00 0.00 35.47 3.41
6343 8960 4.097418 AGCTGTTTCCTGTAGTGATAGGT 58.903 43.478 0.00 0.00 35.47 3.08
6344 8961 4.744795 AGCTGTTTCCTGTAGTGATAGG 57.255 45.455 0.00 0.00 35.28 2.57
6345 8962 8.607459 CAAAATAGCTGTTTCCTGTAGTGATAG 58.393 37.037 9.04 0.00 0.00 2.08
6346 8963 7.065803 GCAAAATAGCTGTTTCCTGTAGTGATA 59.934 37.037 9.04 0.00 0.00 2.15
6347 8964 6.127897 GCAAAATAGCTGTTTCCTGTAGTGAT 60.128 38.462 9.04 0.00 0.00 3.06
6348 8965 5.181245 GCAAAATAGCTGTTTCCTGTAGTGA 59.819 40.000 9.04 0.00 0.00 3.41
6349 8966 5.393962 GCAAAATAGCTGTTTCCTGTAGTG 58.606 41.667 9.04 3.36 0.00 2.74
6350 8967 4.459337 GGCAAAATAGCTGTTTCCTGTAGT 59.541 41.667 9.04 0.00 34.17 2.73
6351 8968 4.437390 CGGCAAAATAGCTGTTTCCTGTAG 60.437 45.833 9.04 0.75 36.15 2.74
6352 8969 3.438781 CGGCAAAATAGCTGTTTCCTGTA 59.561 43.478 9.04 0.00 36.15 2.74
6353 8970 2.228822 CGGCAAAATAGCTGTTTCCTGT 59.771 45.455 9.04 0.00 36.15 4.00
6354 8971 2.867429 CGGCAAAATAGCTGTTTCCTG 58.133 47.619 9.04 6.13 36.15 3.86
6361 8978 1.062525 GCGGACGGCAAAATAGCTG 59.937 57.895 0.00 0.00 46.31 4.24
6362 8979 2.112815 GGCGGACGGCAAAATAGCT 61.113 57.895 13.57 0.00 46.16 3.32
6363 8980 2.407616 GGCGGACGGCAAAATAGC 59.592 61.111 13.57 0.00 46.16 2.97
6413 9030 4.103103 GAGCCTTTTGCCGTCCGC 62.103 66.667 0.00 0.00 42.71 5.54
6414 9031 3.431725 GGAGCCTTTTGCCGTCCG 61.432 66.667 0.00 0.00 42.71 4.79
6415 9032 3.431725 CGGAGCCTTTTGCCGTCC 61.432 66.667 0.00 0.00 42.71 4.79
6416 9033 3.431725 CCGGAGCCTTTTGCCGTC 61.432 66.667 0.00 0.00 43.35 4.79
6419 9036 2.770132 CTTTGCCGGAGCCTTTTGCC 62.770 60.000 5.05 0.00 42.71 4.52
6420 9037 1.373371 CTTTGCCGGAGCCTTTTGC 60.373 57.895 5.05 0.00 38.69 3.68
6421 9038 1.200020 CTACTTTGCCGGAGCCTTTTG 59.800 52.381 5.05 0.00 38.69 2.44
6422 9039 1.534729 CTACTTTGCCGGAGCCTTTT 58.465 50.000 5.05 0.00 38.69 2.27
6423 9040 0.322546 CCTACTTTGCCGGAGCCTTT 60.323 55.000 5.05 0.00 38.69 3.11
6424 9041 1.299976 CCTACTTTGCCGGAGCCTT 59.700 57.895 5.05 0.00 38.69 4.35
6425 9042 2.990479 CCTACTTTGCCGGAGCCT 59.010 61.111 5.05 0.00 38.69 4.58
6426 9043 1.968050 TAGCCTACTTTGCCGGAGCC 61.968 60.000 5.05 0.00 38.69 4.70
6427 9044 0.810426 GTAGCCTACTTTGCCGGAGC 60.810 60.000 5.05 0.00 40.48 4.70
6428 9045 0.527817 CGTAGCCTACTTTGCCGGAG 60.528 60.000 5.05 0.00 0.00 4.63
6429 9046 1.514087 CGTAGCCTACTTTGCCGGA 59.486 57.895 5.05 0.00 0.00 5.14
6430 9047 1.520787 CCGTAGCCTACTTTGCCGG 60.521 63.158 0.00 0.00 0.00 6.13
6431 9048 0.457035 TACCGTAGCCTACTTTGCCG 59.543 55.000 0.00 0.00 0.00 5.69
6432 9049 2.674852 GTTTACCGTAGCCTACTTTGCC 59.325 50.000 0.00 0.00 0.00 4.52
6433 9050 3.328505 TGTTTACCGTAGCCTACTTTGC 58.671 45.455 0.00 0.00 0.00 3.68
6434 9051 5.672819 GCAATGTTTACCGTAGCCTACTTTG 60.673 44.000 0.00 0.00 0.00 2.77
6435 9052 4.393990 GCAATGTTTACCGTAGCCTACTTT 59.606 41.667 0.00 0.00 0.00 2.66
6436 9053 3.937079 GCAATGTTTACCGTAGCCTACTT 59.063 43.478 0.00 0.00 0.00 2.24
6437 9054 3.528532 GCAATGTTTACCGTAGCCTACT 58.471 45.455 0.00 0.00 0.00 2.57
6438 9055 2.610833 GGCAATGTTTACCGTAGCCTAC 59.389 50.000 0.00 0.00 37.67 3.18
6439 9056 2.908916 GGCAATGTTTACCGTAGCCTA 58.091 47.619 0.00 0.00 37.67 3.93
6440 9057 1.280998 AGGCAATGTTTACCGTAGCCT 59.719 47.619 0.00 0.00 45.49 4.58
6441 9058 1.746470 AGGCAATGTTTACCGTAGCC 58.254 50.000 0.00 0.00 40.85 3.93
6442 9059 3.498082 CAAAGGCAATGTTTACCGTAGC 58.502 45.455 0.00 0.00 0.00 3.58
6443 9060 3.498082 GCAAAGGCAATGTTTACCGTAG 58.502 45.455 0.00 0.00 40.72 3.51
6444 9061 2.229302 GGCAAAGGCAATGTTTACCGTA 59.771 45.455 0.00 0.00 43.71 4.02
6445 9062 1.000394 GGCAAAGGCAATGTTTACCGT 60.000 47.619 0.00 0.00 43.71 4.83
6446 9063 1.708822 GGCAAAGGCAATGTTTACCG 58.291 50.000 0.00 0.00 43.71 4.02
6447 9064 1.000394 ACGGCAAAGGCAATGTTTACC 60.000 47.619 0.00 0.00 43.71 2.85
6448 9065 2.030274 AGACGGCAAAGGCAATGTTTAC 60.030 45.455 0.00 0.00 43.71 2.01
6449 9066 2.030363 CAGACGGCAAAGGCAATGTTTA 60.030 45.455 0.00 0.00 43.71 2.01
6450 9067 1.039856 AGACGGCAAAGGCAATGTTT 58.960 45.000 0.00 0.00 43.71 2.83
6451 9068 0.314935 CAGACGGCAAAGGCAATGTT 59.685 50.000 0.00 0.00 43.71 2.71
6452 9069 1.959085 CAGACGGCAAAGGCAATGT 59.041 52.632 0.00 0.00 43.71 2.71
6453 9070 1.444895 GCAGACGGCAAAGGCAATG 60.445 57.895 0.00 0.00 43.71 2.82
6454 9071 2.964978 GCAGACGGCAAAGGCAAT 59.035 55.556 0.00 0.00 43.71 3.56
6463 9080 0.523335 CGCCATAAAAAGCAGACGGC 60.523 55.000 0.00 0.00 45.30 5.68
6464 9081 0.098728 CCGCCATAAAAAGCAGACGG 59.901 55.000 0.00 0.00 0.00 4.79
6465 9082 1.083489 TCCGCCATAAAAAGCAGACG 58.917 50.000 0.00 0.00 0.00 4.18
6466 9083 1.202031 CGTCCGCCATAAAAAGCAGAC 60.202 52.381 0.00 0.00 33.90 3.51
6467 9084 1.083489 CGTCCGCCATAAAAAGCAGA 58.917 50.000 0.00 0.00 0.00 4.26
6468 9085 0.098728 CCGTCCGCCATAAAAAGCAG 59.901 55.000 0.00 0.00 0.00 4.24
6469 9086 1.928706 GCCGTCCGCCATAAAAAGCA 61.929 55.000 0.00 0.00 0.00 3.91
6470 9087 1.226575 GCCGTCCGCCATAAAAAGC 60.227 57.895 0.00 0.00 0.00 3.51
6471 9088 0.523966 TTGCCGTCCGCCATAAAAAG 59.476 50.000 0.00 0.00 36.24 2.27
6472 9089 0.959553 TTTGCCGTCCGCCATAAAAA 59.040 45.000 0.00 0.00 36.24 1.94
6473 9090 0.523966 CTTTGCCGTCCGCCATAAAA 59.476 50.000 0.00 0.00 36.24 1.52
6474 9091 0.321741 TCTTTGCCGTCCGCCATAAA 60.322 50.000 0.00 0.00 36.24 1.40
6475 9092 0.742990 CTCTTTGCCGTCCGCCATAA 60.743 55.000 0.00 0.00 36.24 1.90
6476 9093 1.153449 CTCTTTGCCGTCCGCCATA 60.153 57.895 0.00 0.00 36.24 2.74
6477 9094 2.436646 CTCTTTGCCGTCCGCCAT 60.437 61.111 0.00 0.00 36.24 4.40
6478 9095 3.876589 GACTCTTTGCCGTCCGCCA 62.877 63.158 0.00 0.00 36.24 5.69
6479 9096 3.119096 GACTCTTTGCCGTCCGCC 61.119 66.667 0.00 0.00 36.24 6.13
6480 9097 3.119096 GGACTCTTTGCCGTCCGC 61.119 66.667 0.00 0.00 40.18 5.54
6489 9106 2.784347 GCTGTAGGCAAAGGACTCTTT 58.216 47.619 0.00 0.00 43.41 2.52
6490 9107 1.338200 CGCTGTAGGCAAAGGACTCTT 60.338 52.381 0.00 0.00 41.91 2.85
6491 9108 0.247736 CGCTGTAGGCAAAGGACTCT 59.752 55.000 0.00 0.00 41.91 3.24
6492 9109 0.741221 CCGCTGTAGGCAAAGGACTC 60.741 60.000 0.00 0.00 41.91 3.36
6493 9110 1.296715 CCGCTGTAGGCAAAGGACT 59.703 57.895 0.00 0.00 41.91 3.85
6494 9111 3.890674 CCGCTGTAGGCAAAGGAC 58.109 61.111 0.00 0.00 41.91 3.85
6510 9127 4.388499 TCCTCTTTGCCGTCCGCC 62.388 66.667 0.00 0.00 36.24 6.13
6511 9128 2.815647 CTCCTCTTTGCCGTCCGC 60.816 66.667 0.00 0.00 38.31 5.54
6512 9129 2.125512 CCTCCTCTTTGCCGTCCG 60.126 66.667 0.00 0.00 0.00 4.79
6513 9130 2.269241 CCCTCCTCTTTGCCGTCC 59.731 66.667 0.00 0.00 0.00 4.79
6514 9131 1.079057 GTCCCTCCTCTTTGCCGTC 60.079 63.158 0.00 0.00 0.00 4.79
6515 9132 2.943978 CGTCCCTCCTCTTTGCCGT 61.944 63.158 0.00 0.00 0.00 5.68
6516 9133 2.125512 CGTCCCTCCTCTTTGCCG 60.126 66.667 0.00 0.00 0.00 5.69
6517 9134 2.269241 CCGTCCCTCCTCTTTGCC 59.731 66.667 0.00 0.00 0.00 4.52
6518 9135 2.436824 GCCGTCCCTCCTCTTTGC 60.437 66.667 0.00 0.00 0.00 3.68
6519 9136 0.250727 TTTGCCGTCCCTCCTCTTTG 60.251 55.000 0.00 0.00 0.00 2.77
6520 9137 0.476771 TTTTGCCGTCCCTCCTCTTT 59.523 50.000 0.00 0.00 0.00 2.52
6521 9138 0.476771 TTTTTGCCGTCCCTCCTCTT 59.523 50.000 0.00 0.00 0.00 2.85
6522 9139 0.698818 ATTTTTGCCGTCCCTCCTCT 59.301 50.000 0.00 0.00 0.00 3.69
6523 9140 2.014857 GTATTTTTGCCGTCCCTCCTC 58.985 52.381 0.00 0.00 0.00 3.71
6524 9141 1.633945 AGTATTTTTGCCGTCCCTCCT 59.366 47.619 0.00 0.00 0.00 3.69
6525 9142 1.743394 CAGTATTTTTGCCGTCCCTCC 59.257 52.381 0.00 0.00 0.00 4.30
6526 9143 1.743394 CCAGTATTTTTGCCGTCCCTC 59.257 52.381 0.00 0.00 0.00 4.30
6527 9144 1.353022 TCCAGTATTTTTGCCGTCCCT 59.647 47.619 0.00 0.00 0.00 4.20
6528 9145 1.471287 GTCCAGTATTTTTGCCGTCCC 59.529 52.381 0.00 0.00 0.00 4.46
6529 9146 1.129811 CGTCCAGTATTTTTGCCGTCC 59.870 52.381 0.00 0.00 0.00 4.79
6530 9147 1.802365 ACGTCCAGTATTTTTGCCGTC 59.198 47.619 0.00 0.00 0.00 4.79
6531 9148 1.802365 GACGTCCAGTATTTTTGCCGT 59.198 47.619 3.51 0.00 0.00 5.68
6532 9149 1.129811 GGACGTCCAGTATTTTTGCCG 59.870 52.381 29.75 0.00 35.64 5.69
6533 9150 1.129811 CGGACGTCCAGTATTTTTGCC 59.870 52.381 32.80 3.09 35.14 4.52
6534 9151 1.465187 GCGGACGTCCAGTATTTTTGC 60.465 52.381 32.80 20.49 35.14 3.68
6535 9152 1.129811 GGCGGACGTCCAGTATTTTTG 59.870 52.381 32.80 14.88 35.14 2.44
6536 9153 1.270947 TGGCGGACGTCCAGTATTTTT 60.271 47.619 32.80 0.00 35.14 1.94
6537 9154 0.322322 TGGCGGACGTCCAGTATTTT 59.678 50.000 32.80 0.00 35.14 1.82
6538 9155 0.108329 CTGGCGGACGTCCAGTATTT 60.108 55.000 32.80 0.00 44.62 1.40
6539 9156 1.515954 CTGGCGGACGTCCAGTATT 59.484 57.895 32.80 0.00 44.62 1.89
6540 9157 3.207354 CTGGCGGACGTCCAGTAT 58.793 61.111 32.80 0.00 44.62 2.12
6545 9162 4.424566 TAACGCTGGCGGACGTCC 62.425 66.667 25.28 25.28 42.68 4.79
6546 9163 2.879462 CTAACGCTGGCGGACGTC 60.879 66.667 18.99 7.13 42.68 4.34
6547 9164 3.621892 GACTAACGCTGGCGGACGT 62.622 63.158 18.99 11.54 46.07 4.34
6548 9165 2.879462 GACTAACGCTGGCGGACG 60.879 66.667 18.99 2.72 44.69 4.79
6549 9166 2.508663 GGACTAACGCTGGCGGAC 60.509 66.667 18.99 2.35 44.69 4.79
6550 9167 4.124351 CGGACTAACGCTGGCGGA 62.124 66.667 18.99 5.87 44.69 5.54
6551 9168 2.546645 TAACGGACTAACGCTGGCGG 62.547 60.000 18.99 4.23 44.69 6.13
6552 9169 1.138047 CTAACGGACTAACGCTGGCG 61.138 60.000 13.56 13.56 46.03 5.69
6553 9170 0.804933 CCTAACGGACTAACGCTGGC 60.805 60.000 0.00 0.00 37.37 4.85
6554 9171 0.804933 GCCTAACGGACTAACGCTGG 60.805 60.000 0.00 0.00 37.37 4.85
6555 9172 1.138047 CGCCTAACGGACTAACGCTG 61.138 60.000 0.00 0.00 38.44 5.18
6556 9173 1.138247 CGCCTAACGGACTAACGCT 59.862 57.895 0.00 0.00 38.44 5.07
6557 9174 3.684323 CGCCTAACGGACTAACGC 58.316 61.111 0.00 0.00 38.44 4.84
6567 9184 3.259751 CGCCGTTAGCCGCCTAAC 61.260 66.667 6.23 6.23 46.39 2.34
6568 9185 4.517815 CCGCCGTTAGCCGCCTAA 62.518 66.667 0.00 0.00 38.78 2.69
6575 9192 4.476410 GCAAAGGCCGCCGTTAGC 62.476 66.667 10.46 12.29 38.52 3.09
6599 9216 1.444212 CAAATTTGCCGTCCGCTGG 60.444 57.895 5.01 0.00 38.78 4.85
6600 9217 0.454957 CTCAAATTTGCCGTCCGCTG 60.455 55.000 13.54 0.00 38.78 5.18
6601 9218 1.875963 CTCAAATTTGCCGTCCGCT 59.124 52.632 13.54 0.00 38.78 5.52
6602 9219 1.801512 GCTCAAATTTGCCGTCCGC 60.802 57.895 13.54 5.25 38.31 5.54
6603 9220 1.511887 CGCTCAAATTTGCCGTCCG 60.512 57.895 13.54 7.22 0.00 4.79
6604 9221 1.801512 GCGCTCAAATTTGCCGTCC 60.802 57.895 22.83 10.69 0.00 4.79
6605 9222 1.801512 GGCGCTCAAATTTGCCGTC 60.802 57.895 22.83 19.65 37.81 4.79
6606 9223 2.258286 GGCGCTCAAATTTGCCGT 59.742 55.556 22.83 0.00 37.81 5.68
6609 9226 1.723003 CAAAGAGGCGCTCAAATTTGC 59.277 47.619 13.54 1.77 32.06 3.68
6610 9227 1.723003 GCAAAGAGGCGCTCAAATTTG 59.277 47.619 12.15 12.15 31.08 2.32
6611 9228 1.337167 GGCAAAGAGGCGCTCAAATTT 60.337 47.619 7.64 0.00 32.06 1.82
6612 9229 0.244721 GGCAAAGAGGCGCTCAAATT 59.755 50.000 7.64 0.00 32.06 1.82
6613 9230 1.885871 GGCAAAGAGGCGCTCAAAT 59.114 52.632 7.64 0.00 32.06 2.32
6614 9231 3.354678 GGCAAAGAGGCGCTCAAA 58.645 55.556 7.64 0.00 32.06 2.69
6636 9253 0.110056 CATTGCTGACGTCAACTGGC 60.110 55.000 20.49 18.96 0.00 4.85
6637 9254 0.110056 GCATTGCTGACGTCAACTGG 60.110 55.000 20.49 8.96 0.00 4.00
6638 9255 0.451628 CGCATTGCTGACGTCAACTG 60.452 55.000 20.49 14.38 0.00 3.16
6639 9256 0.880278 ACGCATTGCTGACGTCAACT 60.880 50.000 20.49 1.35 32.31 3.16
6640 9257 0.451135 GACGCATTGCTGACGTCAAC 60.451 55.000 20.49 16.13 44.23 3.18
6641 9258 1.859398 GACGCATTGCTGACGTCAA 59.141 52.632 20.49 5.15 44.23 3.18
6642 9259 3.549467 GACGCATTGCTGACGTCA 58.451 55.556 18.88 18.88 44.23 4.35
6643 9260 1.417592 CTGACGCATTGCTGACGTC 59.582 57.895 9.11 9.11 44.64 4.34
6644 9261 2.671177 GCTGACGCATTGCTGACGT 61.671 57.895 7.12 0.00 37.67 4.34
6645 9262 2.097160 GCTGACGCATTGCTGACG 59.903 61.111 7.12 0.00 35.78 4.35
6646 9263 2.097160 CGCTGACGCATTGCTGAC 59.903 61.111 7.12 2.06 35.30 3.51
6690 9307 3.896863 CTTTGCCTTTGCCGTCCGC 62.897 63.158 0.00 0.00 36.33 5.54
6691 9308 2.255252 CTTTGCCTTTGCCGTCCG 59.745 61.111 0.00 0.00 36.33 4.79
6692 9309 1.172812 AGACTTTGCCTTTGCCGTCC 61.173 55.000 0.00 0.00 36.33 4.79
6693 9310 0.668535 AAGACTTTGCCTTTGCCGTC 59.331 50.000 0.00 0.00 36.33 4.79
6694 9311 1.111277 AAAGACTTTGCCTTTGCCGT 58.889 45.000 0.00 0.00 36.33 5.68
6695 9312 1.490621 CAAAGACTTTGCCTTTGCCG 58.509 50.000 14.73 0.00 42.41 5.69
6704 9321 3.655276 AAGCTGATGGCAAAGACTTTG 57.345 42.857 21.34 21.34 44.79 2.77
6705 9322 3.192212 GCTAAGCTGATGGCAAAGACTTT 59.808 43.478 4.85 0.00 44.79 2.66
6706 9323 2.751806 GCTAAGCTGATGGCAAAGACTT 59.248 45.455 4.85 9.12 44.79 3.01
6707 9324 2.026449 AGCTAAGCTGATGGCAAAGACT 60.026 45.455 4.85 0.00 44.79 3.24
6708 9325 2.363683 AGCTAAGCTGATGGCAAAGAC 58.636 47.619 4.85 0.00 44.79 3.01
6709 9326 2.795231 AGCTAAGCTGATGGCAAAGA 57.205 45.000 4.85 0.00 44.79 2.52
6710 9327 3.508762 CAAAGCTAAGCTGATGGCAAAG 58.491 45.455 0.00 0.00 44.79 2.77
6711 9328 2.353011 GCAAAGCTAAGCTGATGGCAAA 60.353 45.455 0.00 0.00 44.79 3.68
6712 9329 1.203052 GCAAAGCTAAGCTGATGGCAA 59.797 47.619 0.00 0.00 44.79 4.52
6713 9330 0.813184 GCAAAGCTAAGCTGATGGCA 59.187 50.000 3.24 0.00 44.79 4.92
6714 9331 0.101939 GGCAAAGCTAAGCTGATGGC 59.898 55.000 9.80 0.00 41.61 4.40
6715 9332 0.379669 CGGCAAAGCTAAGCTGATGG 59.620 55.000 12.51 0.00 39.62 3.51
6716 9333 1.063174 GACGGCAAAGCTAAGCTGATG 59.937 52.381 21.89 7.99 39.62 3.07
6717 9334 1.373570 GACGGCAAAGCTAAGCTGAT 58.626 50.000 21.89 9.21 39.62 2.90
6718 9335 0.673644 GGACGGCAAAGCTAAGCTGA 60.674 55.000 21.89 0.00 39.62 4.26
6719 9336 1.796796 GGACGGCAAAGCTAAGCTG 59.203 57.895 15.43 15.43 39.62 4.24
6720 9337 1.741770 CGGACGGCAAAGCTAAGCT 60.742 57.895 9.80 0.00 42.56 3.74
6721 9338 2.785258 CGGACGGCAAAGCTAAGC 59.215 61.111 0.00 1.86 0.00 3.09
6722 9339 2.750888 GGCGGACGGCAAAGCTAAG 61.751 63.158 13.57 0.00 46.16 2.18
6723 9340 2.744709 GGCGGACGGCAAAGCTAA 60.745 61.111 13.57 0.00 46.16 3.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.