Multiple sequence alignment - TraesCS1D01G213100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G213100 chr1D 100.000 2465 0 0 1 2465 298575347 298572883 0.000000e+00 4553.0
1 TraesCS1D01G213100 chr1D 90.940 298 26 1 354 650 318585923 318585626 1.370000e-107 399.0
2 TraesCS1D01G213100 chr1D 79.762 168 29 4 1290 1456 298619936 298619773 1.550000e-22 117.0
3 TraesCS1D01G213100 chr1D 85.714 56 5 3 292 345 30367499 30367553 3.420000e-04 56.5
4 TraesCS1D01G213100 chr1A 93.868 848 36 4 749 1589 372241911 372241073 0.000000e+00 1264.0
5 TraesCS1D01G213100 chr1A 97.067 716 14 4 1753 2465 372240984 372240273 0.000000e+00 1199.0
6 TraesCS1D01G213100 chr1A 90.554 307 26 3 349 652 151337470 151337776 1.060000e-108 403.0
7 TraesCS1D01G213100 chr1A 90.260 154 8 4 171 324 410452707 410452561 6.960000e-46 195.0
8 TraesCS1D01G213100 chr1A 80.357 168 28 4 1290 1456 372467740 372467577 3.330000e-24 122.0
9 TraesCS1D01G213100 chr1A 92.683 41 2 1 1715 1755 372241053 372241014 9.520000e-05 58.4
10 TraesCS1D01G213100 chr1A 85.714 56 5 3 292 345 79835065 79835119 3.420000e-04 56.5
11 TraesCS1D01G213100 chr1B 97.487 597 11 2 1753 2346 401624193 401623598 0.000000e+00 1016.0
12 TraesCS1D01G213100 chr1B 92.749 593 27 7 753 1344 401625024 401624447 0.000000e+00 843.0
13 TraesCS1D01G213100 chr1B 91.667 216 18 0 749 964 401813537 401813322 1.430000e-77 300.0
14 TraesCS1D01G213100 chr1B 93.413 167 11 0 1423 1589 401624448 401624282 5.260000e-62 248.0
15 TraesCS1D01G213100 chr1B 98.438 128 2 0 2338 2465 401623447 401623320 2.470000e-55 226.0
16 TraesCS1D01G213100 chr1B 79.762 168 29 4 1290 1456 402050919 402050756 1.550000e-22 117.0
17 TraesCS1D01G213100 chr1B 86.408 103 12 2 649 749 265287121 265287019 7.210000e-21 111.0
18 TraesCS1D01G213100 chr1B 94.444 36 2 0 1720 1755 401624258 401624223 3.420000e-04 56.5
19 TraesCS1D01G213100 chr3D 96.307 352 10 3 1 350 414830642 414830292 2.130000e-160 575.0
20 TraesCS1D01G213100 chr3D 89.905 317 24 7 343 651 175663861 175663545 3.820000e-108 401.0
21 TraesCS1D01G213100 chr3D 90.728 151 11 2 2312 2462 132924305 132924452 5.380000e-47 198.0
22 TraesCS1D01G213100 chr3D 96.078 102 2 2 649 749 414830307 414830207 5.450000e-37 165.0
23 TraesCS1D01G213100 chr3D 95.192 104 5 0 1599 1702 610203814 610203711 5.450000e-37 165.0
24 TraesCS1D01G213100 chr2A 91.148 305 24 3 350 651 729554941 729555245 6.340000e-111 411.0
25 TraesCS1D01G213100 chr2A 90.850 306 26 2 351 655 459017305 459017001 2.280000e-110 409.0
26 TraesCS1D01G213100 chr2A 88.119 101 7 4 650 749 276390775 276390679 5.570000e-22 115.0
27 TraesCS1D01G213100 chr2A 92.157 51 3 1 1179 1228 669558144 669558094 1.220000e-08 71.3
28 TraesCS1D01G213100 chr7A 90.096 313 28 3 351 660 419932559 419932247 1.060000e-108 403.0
29 TraesCS1D01G213100 chr7A 87.500 160 19 1 1 160 539708605 539708763 1.510000e-42 183.0
30 TraesCS1D01G213100 chr2B 90.323 310 26 4 346 651 131178180 131178489 1.060000e-108 403.0
31 TraesCS1D01G213100 chr2B 89.474 152 11 3 2309 2460 543512091 543512237 1.160000e-43 187.0
32 TraesCS1D01G213100 chr2B 93.519 108 7 0 1589 1696 55924578 55924685 7.050000e-36 161.0
33 TraesCS1D01G213100 chr2B 86.861 137 15 3 2316 2452 543512971 543513104 1.530000e-32 150.0
34 TraesCS1D01G213100 chr2B 83.660 153 17 6 2311 2460 543512251 543512398 1.190000e-28 137.0
35 TraesCS1D01G213100 chr6D 90.728 302 26 2 351 650 437267603 437267302 3.820000e-108 401.0
36 TraesCS1D01G213100 chr6D 90.228 307 26 2 351 655 69292644 69292948 4.940000e-107 398.0
37 TraesCS1D01G213100 chr6D 88.235 153 14 3 2306 2458 399037137 399036989 1.950000e-41 180.0
38 TraesCS1D01G213100 chr6D 95.192 104 5 0 1599 1702 458198986 458198883 5.450000e-37 165.0
39 TraesCS1D01G213100 chr6D 95.192 104 5 0 1599 1702 458222497 458222394 5.450000e-37 165.0
40 TraesCS1D01G213100 chr7B 96.133 181 7 0 170 350 44807940 44807760 1.850000e-76 296.0
41 TraesCS1D01G213100 chr7B 95.484 155 5 1 1 153 44808499 44808345 1.890000e-61 246.0
42 TraesCS1D01G213100 chr7B 90.556 180 17 0 170 349 725984722 725984543 3.170000e-59 239.0
43 TraesCS1D01G213100 chr7B 90.968 155 12 1 1 153 725985279 725985125 8.930000e-50 207.0
44 TraesCS1D01G213100 chr7B 87.234 141 15 1 2314 2454 634628064 634627927 9.130000e-35 158.0
45 TraesCS1D01G213100 chr7B 85.714 154 17 4 1 152 736882281 736882431 9.130000e-35 158.0
46 TraesCS1D01G213100 chr7B 84.868 152 22 1 1 152 99290022 99289872 4.250000e-33 152.0
47 TraesCS1D01G213100 chr7B 87.255 102 8 4 650 750 516683197 516683294 7.210000e-21 111.0
48 TraesCS1D01G213100 chr7B 86.275 102 12 2 649 749 736883000 736883100 2.590000e-20 110.0
49 TraesCS1D01G213100 chr6A 89.944 179 18 0 171 349 242749417 242749595 5.300000e-57 231.0
50 TraesCS1D01G213100 chr6A 89.831 177 18 0 171 347 299296630 299296806 6.860000e-56 228.0
51 TraesCS1D01G213100 chr6A 91.139 158 12 2 1 156 242748873 242749030 1.920000e-51 213.0
52 TraesCS1D01G213100 chr6A 91.781 146 11 1 1 146 299296077 299296221 4.160000e-48 202.0
53 TraesCS1D01G213100 chr6A 94.444 108 6 0 1595 1702 99210469 99210576 1.520000e-37 167.0
54 TraesCS1D01G213100 chr6A 88.235 102 10 2 649 749 242749580 242749680 1.200000e-23 121.0
55 TraesCS1D01G213100 chr6A 89.583 96 9 1 655 749 576171804 576171709 1.200000e-23 121.0
56 TraesCS1D01G213100 chr7D 90.580 138 9 3 19 153 626149053 626148917 1.950000e-41 180.0
57 TraesCS1D01G213100 chr3A 94.595 111 6 0 1592 1702 28893627 28893737 3.260000e-39 172.0
58 TraesCS1D01G213100 chr3A 87.255 102 12 1 649 749 708068023 708067922 5.570000e-22 115.0
59 TraesCS1D01G213100 chr6B 94.444 108 6 0 1595 1702 272401756 272401649 1.520000e-37 167.0
60 TraesCS1D01G213100 chr5B 95.238 105 5 0 1598 1702 484894595 484894699 1.520000e-37 167.0
61 TraesCS1D01G213100 chrUn 95.192 104 5 0 1599 1702 362324467 362324364 5.450000e-37 165.0
62 TraesCS1D01G213100 chr5A 86.184 152 16 3 2310 2460 609951930 609951783 2.540000e-35 159.0
63 TraesCS1D01G213100 chr3B 89.623 106 8 3 649 752 193623509 193623405 5.530000e-27 132.0
64 TraesCS1D01G213100 chr2D 94.231 52 3 0 1179 1230 523738301 523738250 2.030000e-11 80.5
65 TraesCS1D01G213100 chr4A 85.714 56 5 3 292 345 142077827 142077773 3.420000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G213100 chr1D 298572883 298575347 2464 True 4553.000000 4553 100.000000 1 2465 1 chr1D.!!$R1 2464
1 TraesCS1D01G213100 chr1A 372240273 372241911 1638 True 840.466667 1264 94.539333 749 2465 3 chr1A.!!$R3 1716
2 TraesCS1D01G213100 chr1B 401623320 401625024 1704 True 477.900000 1016 95.306200 753 2465 5 chr1B.!!$R4 1712
3 TraesCS1D01G213100 chr7B 44807760 44808499 739 True 271.000000 296 95.808500 1 350 2 chr7B.!!$R3 349
4 TraesCS1D01G213100 chr7B 725984543 725985279 736 True 223.000000 239 90.762000 1 349 2 chr7B.!!$R4 348
5 TraesCS1D01G213100 chr6A 299296077 299296806 729 False 215.000000 228 90.806000 1 347 2 chr6A.!!$F3 346

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
466 866 0.035439 AGGAATTCCGGCGATGTGTT 60.035 50.0 18.82 0.0 42.08 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1747 2154 0.319211 CACGGCGTTCACAGGTCTAA 60.319 55.0 11.19 0.0 0.0 2.1 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
298 698 5.147162 GTGTGCTCTAAGTTCAAAAATCCG 58.853 41.667 0.00 0.00 0.00 4.18
310 710 8.084590 AGTTCAAAAATCCGTTGAGTTAGTAG 57.915 34.615 0.00 0.00 36.41 2.57
326 726 9.682465 TGAGTTAGTAGCTACTCTTGAAGAATA 57.318 33.333 29.28 5.62 37.73 1.75
350 750 7.698836 ATGTTTCAAAGTCGAGAAAAATTGG 57.301 32.000 0.00 0.00 35.71 3.16
351 751 5.518487 TGTTTCAAAGTCGAGAAAAATTGGC 59.482 36.000 0.00 0.00 35.71 4.52
352 752 3.884169 TCAAAGTCGAGAAAAATTGGCG 58.116 40.909 0.00 0.00 0.00 5.69
353 753 3.562141 TCAAAGTCGAGAAAAATTGGCGA 59.438 39.130 0.00 0.00 0.00 5.54
354 754 4.035792 TCAAAGTCGAGAAAAATTGGCGAA 59.964 37.500 0.00 0.00 32.39 4.70
355 755 3.537793 AGTCGAGAAAAATTGGCGAAC 57.462 42.857 0.00 0.00 32.39 3.95
356 756 2.225727 AGTCGAGAAAAATTGGCGAACC 59.774 45.455 0.00 0.00 32.39 3.62
377 777 2.879103 ACCTGTGGTTGGATGGTTAG 57.121 50.000 0.00 0.00 27.29 2.34
378 778 2.344592 ACCTGTGGTTGGATGGTTAGA 58.655 47.619 0.00 0.00 27.29 2.10
379 779 2.305927 ACCTGTGGTTGGATGGTTAGAG 59.694 50.000 0.00 0.00 27.29 2.43
380 780 2.356125 CCTGTGGTTGGATGGTTAGAGG 60.356 54.545 0.00 0.00 0.00 3.69
381 781 1.633432 TGTGGTTGGATGGTTAGAGGG 59.367 52.381 0.00 0.00 0.00 4.30
382 782 1.913419 GTGGTTGGATGGTTAGAGGGA 59.087 52.381 0.00 0.00 0.00 4.20
383 783 1.913419 TGGTTGGATGGTTAGAGGGAC 59.087 52.381 0.00 0.00 0.00 4.46
384 784 1.913419 GGTTGGATGGTTAGAGGGACA 59.087 52.381 0.00 0.00 0.00 4.02
385 785 2.092914 GGTTGGATGGTTAGAGGGACAG 60.093 54.545 0.00 0.00 0.00 3.51
386 786 2.572104 GTTGGATGGTTAGAGGGACAGT 59.428 50.000 0.00 0.00 0.00 3.55
387 787 2.187958 TGGATGGTTAGAGGGACAGTG 58.812 52.381 0.00 0.00 0.00 3.66
388 788 1.486726 GGATGGTTAGAGGGACAGTGG 59.513 57.143 0.00 0.00 0.00 4.00
389 789 0.912486 ATGGTTAGAGGGACAGTGGC 59.088 55.000 0.00 0.00 0.00 5.01
390 790 0.472925 TGGTTAGAGGGACAGTGGCA 60.473 55.000 0.00 0.00 0.00 4.92
391 791 0.912486 GGTTAGAGGGACAGTGGCAT 59.088 55.000 0.00 0.00 0.00 4.40
392 792 1.134371 GGTTAGAGGGACAGTGGCATC 60.134 57.143 0.00 0.00 0.00 3.91
393 793 1.134371 GTTAGAGGGACAGTGGCATCC 60.134 57.143 0.00 0.00 0.00 3.51
397 797 2.273449 GGACAGTGGCATCCCCAG 59.727 66.667 0.00 0.00 46.54 4.45
398 798 2.439156 GACAGTGGCATCCCCAGC 60.439 66.667 0.00 0.00 46.54 4.85
405 805 4.828296 GCATCCCCAGCCCACCAG 62.828 72.222 0.00 0.00 0.00 4.00
406 806 4.133373 CATCCCCAGCCCACCAGG 62.133 72.222 0.00 0.00 39.47 4.45
407 807 4.369591 ATCCCCAGCCCACCAGGA 62.370 66.667 0.00 0.00 38.24 3.86
408 808 3.683017 ATCCCCAGCCCACCAGGAT 62.683 63.158 0.00 0.00 38.24 3.24
409 809 3.350163 CCCCAGCCCACCAGGATT 61.350 66.667 0.00 0.00 38.24 3.01
410 810 2.276740 CCCAGCCCACCAGGATTC 59.723 66.667 0.00 0.00 38.24 2.52
411 811 2.615465 CCCAGCCCACCAGGATTCA 61.615 63.158 0.00 0.00 38.24 2.57
412 812 1.383799 CCAGCCCACCAGGATTCAA 59.616 57.895 0.00 0.00 38.24 2.69
413 813 0.682209 CCAGCCCACCAGGATTCAAG 60.682 60.000 0.00 0.00 38.24 3.02
414 814 0.038744 CAGCCCACCAGGATTCAAGT 59.961 55.000 0.00 0.00 38.24 3.16
415 815 0.329596 AGCCCACCAGGATTCAAGTC 59.670 55.000 0.00 0.00 38.24 3.01
416 816 0.681243 GCCCACCAGGATTCAAGTCC 60.681 60.000 0.00 0.00 38.24 3.85
422 822 3.566130 AGGATTCAAGTCCTGCTGC 57.434 52.632 0.00 0.00 46.76 5.25
423 823 0.990374 AGGATTCAAGTCCTGCTGCT 59.010 50.000 0.00 0.00 46.76 4.24
424 824 1.065564 AGGATTCAAGTCCTGCTGCTC 60.066 52.381 0.00 0.00 46.76 4.26
425 825 1.005340 GATTCAAGTCCTGCTGCTCG 58.995 55.000 0.00 0.00 0.00 5.03
426 826 1.023513 ATTCAAGTCCTGCTGCTCGC 61.024 55.000 0.00 0.00 39.77 5.03
435 835 3.786656 TGCTGCTCGCATTATTCCT 57.213 47.368 0.00 0.00 45.47 3.36
436 836 1.302366 TGCTGCTCGCATTATTCCTG 58.698 50.000 0.00 0.00 45.47 3.86
437 837 0.590195 GCTGCTCGCATTATTCCTGG 59.410 55.000 0.00 0.00 38.92 4.45
438 838 1.811558 GCTGCTCGCATTATTCCTGGA 60.812 52.381 0.00 0.00 38.92 3.86
439 839 2.775890 CTGCTCGCATTATTCCTGGAT 58.224 47.619 0.00 0.00 0.00 3.41
440 840 3.144506 CTGCTCGCATTATTCCTGGATT 58.855 45.455 0.00 0.00 0.00 3.01
441 841 3.554934 TGCTCGCATTATTCCTGGATTT 58.445 40.909 0.00 0.00 0.00 2.17
442 842 4.713553 TGCTCGCATTATTCCTGGATTTA 58.286 39.130 0.00 0.00 0.00 1.40
443 843 5.316167 TGCTCGCATTATTCCTGGATTTAT 58.684 37.500 0.00 0.00 0.00 1.40
444 844 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
445 845 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
446 846 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
447 847 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
448 848 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
449 849 7.040478 TCGCATTATTCCTGGATTTATTTCAGG 60.040 37.037 0.00 0.00 46.91 3.86
457 857 6.076981 CTGGATTTATTTCAGGAATTCCGG 57.923 41.667 18.82 18.22 42.08 5.14
458 858 4.340950 TGGATTTATTTCAGGAATTCCGGC 59.659 41.667 18.78 3.32 42.08 6.13
459 859 4.537015 GATTTATTTCAGGAATTCCGGCG 58.463 43.478 18.78 11.74 42.08 6.46
460 860 2.992124 TATTTCAGGAATTCCGGCGA 57.008 45.000 18.78 13.75 42.08 5.54
461 861 2.348411 ATTTCAGGAATTCCGGCGAT 57.652 45.000 18.78 11.99 42.08 4.58
462 862 1.378531 TTTCAGGAATTCCGGCGATG 58.621 50.000 18.78 11.47 42.08 3.84
463 863 0.251916 TTCAGGAATTCCGGCGATGT 59.748 50.000 18.78 0.00 42.08 3.06
464 864 0.461870 TCAGGAATTCCGGCGATGTG 60.462 55.000 18.78 10.10 42.08 3.21
465 865 0.744414 CAGGAATTCCGGCGATGTGT 60.744 55.000 18.82 0.00 42.08 3.72
466 866 0.035439 AGGAATTCCGGCGATGTGTT 60.035 50.000 18.82 0.00 42.08 3.32
467 867 0.808755 GGAATTCCGGCGATGTGTTT 59.191 50.000 9.30 0.00 0.00 2.83
468 868 1.201414 GGAATTCCGGCGATGTGTTTT 59.799 47.619 9.30 0.00 0.00 2.43
469 869 2.515912 GAATTCCGGCGATGTGTTTTC 58.484 47.619 9.30 0.00 0.00 2.29
470 870 1.529226 ATTCCGGCGATGTGTTTTCA 58.471 45.000 9.30 0.00 0.00 2.69
471 871 0.871722 TTCCGGCGATGTGTTTTCAG 59.128 50.000 9.30 0.00 0.00 3.02
472 872 0.250124 TCCGGCGATGTGTTTTCAGT 60.250 50.000 9.30 0.00 0.00 3.41
473 873 0.110238 CCGGCGATGTGTTTTCAGTG 60.110 55.000 9.30 0.00 0.00 3.66
474 874 0.110238 CGGCGATGTGTTTTCAGTGG 60.110 55.000 0.00 0.00 0.00 4.00
475 875 0.240945 GGCGATGTGTTTTCAGTGGG 59.759 55.000 0.00 0.00 0.00 4.61
476 876 1.234821 GCGATGTGTTTTCAGTGGGA 58.765 50.000 0.00 0.00 0.00 4.37
477 877 1.197721 GCGATGTGTTTTCAGTGGGAG 59.802 52.381 0.00 0.00 0.00 4.30
478 878 2.766313 CGATGTGTTTTCAGTGGGAGA 58.234 47.619 0.00 0.00 0.00 3.71
479 879 3.138304 CGATGTGTTTTCAGTGGGAGAA 58.862 45.455 0.00 0.00 0.00 2.87
480 880 3.187227 CGATGTGTTTTCAGTGGGAGAAG 59.813 47.826 0.00 0.00 0.00 2.85
481 881 3.924114 TGTGTTTTCAGTGGGAGAAGA 57.076 42.857 0.00 0.00 0.00 2.87
482 882 3.541632 TGTGTTTTCAGTGGGAGAAGAC 58.458 45.455 0.00 0.00 35.28 3.01
483 883 2.544267 GTGTTTTCAGTGGGAGAAGACG 59.456 50.000 0.00 0.00 34.03 4.18
484 884 2.169769 TGTTTTCAGTGGGAGAAGACGT 59.830 45.455 0.00 0.00 34.03 4.34
485 885 3.203716 GTTTTCAGTGGGAGAAGACGTT 58.796 45.455 0.00 0.00 0.00 3.99
486 886 2.814280 TTCAGTGGGAGAAGACGTTC 57.186 50.000 0.00 0.00 0.00 3.95
487 887 0.966920 TCAGTGGGAGAAGACGTTCC 59.033 55.000 0.00 0.00 32.48 3.62
498 898 3.730761 ACGTTCCCGTCGACGAGG 61.731 66.667 37.65 32.46 46.28 4.63
499 899 3.425713 CGTTCCCGTCGACGAGGA 61.426 66.667 37.65 33.95 41.53 3.71
500 900 2.484203 GTTCCCGTCGACGAGGAG 59.516 66.667 37.65 20.95 43.02 3.69
501 901 2.749044 TTCCCGTCGACGAGGAGG 60.749 66.667 37.65 28.37 43.02 4.30
504 904 4.477975 CCGTCGACGAGGAGGCAC 62.478 72.222 37.65 0.00 43.02 5.01
505 905 4.477975 CGTCGACGAGGAGGCACC 62.478 72.222 33.35 0.00 43.02 5.01
527 927 7.356089 ACCTACGGTGACTTCATAAATATCA 57.644 36.000 0.00 0.00 32.98 2.15
528 928 7.788026 ACCTACGGTGACTTCATAAATATCAA 58.212 34.615 0.00 0.00 32.98 2.57
529 929 8.262227 ACCTACGGTGACTTCATAAATATCAAA 58.738 33.333 0.00 0.00 32.98 2.69
530 930 9.104965 CCTACGGTGACTTCATAAATATCAAAA 57.895 33.333 0.00 0.00 0.00 2.44
533 933 9.173021 ACGGTGACTTCATAAATATCAAAATGA 57.827 29.630 0.00 0.00 0.00 2.57
542 942 8.190122 TCATAAATATCAAAATGATATGCCGGC 58.810 33.333 22.73 22.73 46.26 6.13
543 943 6.594788 AAATATCAAAATGATATGCCGGCT 57.405 33.333 29.70 15.76 46.26 5.52
544 944 5.824904 ATATCAAAATGATATGCCGGCTC 57.175 39.130 29.70 17.89 45.50 4.70
545 945 2.929641 TCAAAATGATATGCCGGCTCA 58.070 42.857 29.70 23.34 0.00 4.26
546 946 2.880268 TCAAAATGATATGCCGGCTCAG 59.120 45.455 29.70 11.05 0.00 3.35
547 947 2.620115 CAAAATGATATGCCGGCTCAGT 59.380 45.455 29.70 19.53 0.00 3.41
548 948 2.175878 AATGATATGCCGGCTCAGTC 57.824 50.000 29.70 19.55 0.00 3.51
549 949 1.346062 ATGATATGCCGGCTCAGTCT 58.654 50.000 29.70 5.43 0.00 3.24
550 950 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
551 951 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
552 952 0.965439 ATATGCCGGCTCAGTCTCTC 59.035 55.000 29.70 0.00 0.00 3.20
553 953 1.448119 TATGCCGGCTCAGTCTCTCG 61.448 60.000 29.70 0.00 0.00 4.04
554 954 4.200283 GCCGGCTCAGTCTCTCGG 62.200 72.222 22.15 0.00 43.13 4.63
555 955 2.438614 CCGGCTCAGTCTCTCGGA 60.439 66.667 0.00 0.00 42.94 4.55
556 956 2.046864 CCGGCTCAGTCTCTCGGAA 61.047 63.158 0.00 0.00 42.94 4.30
557 957 1.431440 CGGCTCAGTCTCTCGGAAG 59.569 63.158 0.00 0.00 0.00 3.46
558 958 1.309499 CGGCTCAGTCTCTCGGAAGT 61.309 60.000 0.00 0.00 0.00 3.01
559 959 0.172352 GGCTCAGTCTCTCGGAAGTG 59.828 60.000 0.00 0.00 0.00 3.16
560 960 0.457681 GCTCAGTCTCTCGGAAGTGC 60.458 60.000 0.00 0.00 0.00 4.40
561 961 1.173043 CTCAGTCTCTCGGAAGTGCT 58.827 55.000 0.00 0.00 0.00 4.40
562 962 1.132262 CTCAGTCTCTCGGAAGTGCTC 59.868 57.143 0.00 0.00 0.00 4.26
563 963 0.884514 CAGTCTCTCGGAAGTGCTCA 59.115 55.000 0.00 0.00 0.00 4.26
564 964 1.476085 CAGTCTCTCGGAAGTGCTCAT 59.524 52.381 0.00 0.00 0.00 2.90
565 965 2.685388 CAGTCTCTCGGAAGTGCTCATA 59.315 50.000 0.00 0.00 0.00 2.15
566 966 2.948979 AGTCTCTCGGAAGTGCTCATAG 59.051 50.000 0.00 0.00 0.00 2.23
567 967 2.034053 GTCTCTCGGAAGTGCTCATAGG 59.966 54.545 0.00 0.00 0.00 2.57
568 968 1.339610 CTCTCGGAAGTGCTCATAGGG 59.660 57.143 0.00 0.00 0.00 3.53
569 969 0.390860 CTCGGAAGTGCTCATAGGGG 59.609 60.000 0.00 0.00 0.00 4.79
570 970 0.325296 TCGGAAGTGCTCATAGGGGT 60.325 55.000 0.00 0.00 0.00 4.95
571 971 1.063492 TCGGAAGTGCTCATAGGGGTA 60.063 52.381 0.00 0.00 0.00 3.69
572 972 1.341531 CGGAAGTGCTCATAGGGGTAG 59.658 57.143 0.00 0.00 0.00 3.18
573 973 1.694696 GGAAGTGCTCATAGGGGTAGG 59.305 57.143 0.00 0.00 0.00 3.18
574 974 1.694696 GAAGTGCTCATAGGGGTAGGG 59.305 57.143 0.00 0.00 0.00 3.53
575 975 0.642710 AGTGCTCATAGGGGTAGGGT 59.357 55.000 0.00 0.00 0.00 4.34
576 976 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
577 977 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
578 978 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
579 979 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
580 980 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
581 981 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
582 982 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
583 983 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
584 984 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
585 985 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
586 986 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
587 987 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
590 990 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
591 991 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
592 992 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
593 993 2.350760 GTGCGTGTGTGCGTTCAC 60.351 61.111 5.43 5.43 43.40 3.18
610 1010 3.514777 ACAGCGGTGAGTGTATGTG 57.485 52.632 23.44 0.00 0.00 3.21
611 1011 0.670546 ACAGCGGTGAGTGTATGTGC 60.671 55.000 23.44 0.00 0.00 4.57
612 1012 0.670239 CAGCGGTGAGTGTATGTGCA 60.670 55.000 9.50 0.00 0.00 4.57
613 1013 0.250234 AGCGGTGAGTGTATGTGCAT 59.750 50.000 0.00 0.00 0.00 3.96
614 1014 1.480545 AGCGGTGAGTGTATGTGCATA 59.519 47.619 0.00 0.00 0.00 3.14
615 1015 2.103094 AGCGGTGAGTGTATGTGCATAT 59.897 45.455 0.31 0.31 0.00 1.78
616 1016 2.221749 GCGGTGAGTGTATGTGCATATG 59.778 50.000 6.16 0.00 0.00 1.78
617 1017 3.457234 CGGTGAGTGTATGTGCATATGT 58.543 45.455 6.16 0.00 0.00 2.29
618 1018 4.616953 CGGTGAGTGTATGTGCATATGTA 58.383 43.478 6.16 0.00 0.00 2.29
619 1019 5.230182 CGGTGAGTGTATGTGCATATGTAT 58.770 41.667 6.16 0.05 0.00 2.29
620 1020 5.119125 CGGTGAGTGTATGTGCATATGTATG 59.881 44.000 6.16 0.00 36.78 2.39
621 1021 6.223120 GGTGAGTGTATGTGCATATGTATGA 58.777 40.000 6.16 0.00 35.75 2.15
622 1022 6.367149 GGTGAGTGTATGTGCATATGTATGAG 59.633 42.308 6.16 0.00 35.75 2.90
623 1023 5.928264 TGAGTGTATGTGCATATGTATGAGC 59.072 40.000 6.16 0.00 35.75 4.26
624 1024 4.925646 AGTGTATGTGCATATGTATGAGCG 59.074 41.667 6.16 0.00 35.75 5.03
625 1025 3.679502 TGTATGTGCATATGTATGAGCGC 59.320 43.478 6.16 0.00 35.75 5.92
626 1026 2.531522 TGTGCATATGTATGAGCGCT 57.468 45.000 11.27 11.27 38.26 5.92
627 1027 2.837498 TGTGCATATGTATGAGCGCTT 58.163 42.857 13.26 0.00 38.26 4.68
628 1028 2.802247 TGTGCATATGTATGAGCGCTTC 59.198 45.455 13.26 5.55 38.26 3.86
629 1029 2.061028 TGCATATGTATGAGCGCTTCG 58.939 47.619 13.26 0.00 35.75 3.79
630 1030 2.061773 GCATATGTATGAGCGCTTCGT 58.938 47.619 13.26 9.09 35.75 3.85
631 1031 2.091277 GCATATGTATGAGCGCTTCGTC 59.909 50.000 13.26 0.00 35.75 4.20
632 1032 3.569548 CATATGTATGAGCGCTTCGTCT 58.430 45.455 13.26 0.00 35.75 4.18
633 1033 1.845266 ATGTATGAGCGCTTCGTCTG 58.155 50.000 13.26 0.00 0.00 3.51
634 1034 0.526211 TGTATGAGCGCTTCGTCTGT 59.474 50.000 13.26 0.00 0.00 3.41
635 1035 1.741145 TGTATGAGCGCTTCGTCTGTA 59.259 47.619 13.26 0.00 0.00 2.74
636 1036 2.110226 GTATGAGCGCTTCGTCTGTAC 58.890 52.381 13.26 3.86 0.00 2.90
637 1037 0.811915 ATGAGCGCTTCGTCTGTACT 59.188 50.000 13.26 0.00 0.00 2.73
638 1038 0.109735 TGAGCGCTTCGTCTGTACTG 60.110 55.000 13.26 0.00 0.00 2.74
639 1039 0.109689 GAGCGCTTCGTCTGTACTGT 60.110 55.000 13.26 0.00 0.00 3.55
640 1040 0.387367 AGCGCTTCGTCTGTACTGTG 60.387 55.000 2.64 0.00 0.00 3.66
641 1041 0.663568 GCGCTTCGTCTGTACTGTGT 60.664 55.000 0.00 0.00 0.00 3.72
642 1042 1.767289 CGCTTCGTCTGTACTGTGTT 58.233 50.000 0.00 0.00 0.00 3.32
643 1043 2.919387 GCGCTTCGTCTGTACTGTGTTA 60.919 50.000 0.00 0.00 0.00 2.41
644 1044 3.302555 CGCTTCGTCTGTACTGTGTTAA 58.697 45.455 0.00 0.00 0.00 2.01
645 1045 3.732219 CGCTTCGTCTGTACTGTGTTAAA 59.268 43.478 0.00 0.00 0.00 1.52
646 1046 4.207635 CGCTTCGTCTGTACTGTGTTAAAA 59.792 41.667 0.00 0.00 0.00 1.52
647 1047 5.276489 CGCTTCGTCTGTACTGTGTTAAAAA 60.276 40.000 0.00 0.00 0.00 1.94
681 1081 2.032681 GCACTTGGCGGAAGTCCT 59.967 61.111 0.00 0.00 43.52 3.85
682 1082 2.035442 GCACTTGGCGGAAGTCCTC 61.035 63.158 0.00 0.00 43.52 3.71
683 1083 1.376037 CACTTGGCGGAAGTCCTCC 60.376 63.158 0.00 0.00 43.52 4.30
690 1090 2.047179 GGAAGTCCTCCGTGCACC 60.047 66.667 12.15 0.00 33.37 5.01
691 1091 2.741092 GAAGTCCTCCGTGCACCA 59.259 61.111 12.15 0.00 0.00 4.17
692 1092 1.668151 GAAGTCCTCCGTGCACCAC 60.668 63.158 12.15 0.38 0.00 4.16
693 1093 3.178540 AAGTCCTCCGTGCACCACC 62.179 63.158 12.15 0.00 0.00 4.61
694 1094 4.699522 GTCCTCCGTGCACCACCC 62.700 72.222 12.15 0.00 0.00 4.61
695 1095 4.954118 TCCTCCGTGCACCACCCT 62.954 66.667 12.15 0.00 0.00 4.34
696 1096 4.394712 CCTCCGTGCACCACCCTC 62.395 72.222 12.15 0.00 0.00 4.30
697 1097 3.314331 CTCCGTGCACCACCCTCT 61.314 66.667 12.15 0.00 0.00 3.69
698 1098 3.302347 CTCCGTGCACCACCCTCTC 62.302 68.421 12.15 0.00 0.00 3.20
699 1099 3.314331 CCGTGCACCACCCTCTCT 61.314 66.667 12.15 0.00 0.00 3.10
700 1100 2.262915 CGTGCACCACCCTCTCTC 59.737 66.667 12.15 0.00 0.00 3.20
701 1101 2.574018 CGTGCACCACCCTCTCTCA 61.574 63.158 12.15 0.00 0.00 3.27
702 1102 1.754745 GTGCACCACCCTCTCTCAA 59.245 57.895 5.22 0.00 0.00 3.02
703 1103 0.603975 GTGCACCACCCTCTCTCAAC 60.604 60.000 5.22 0.00 0.00 3.18
704 1104 1.003233 GCACCACCCTCTCTCAACC 60.003 63.158 0.00 0.00 0.00 3.77
705 1105 1.768684 GCACCACCCTCTCTCAACCA 61.769 60.000 0.00 0.00 0.00 3.67
706 1106 0.035458 CACCACCCTCTCTCAACCAC 59.965 60.000 0.00 0.00 0.00 4.16
707 1107 0.104934 ACCACCCTCTCTCAACCACT 60.105 55.000 0.00 0.00 0.00 4.00
708 1108 0.322975 CCACCCTCTCTCAACCACTG 59.677 60.000 0.00 0.00 0.00 3.66
709 1109 0.321122 CACCCTCTCTCAACCACTGC 60.321 60.000 0.00 0.00 0.00 4.40
710 1110 1.298014 CCCTCTCTCAACCACTGCC 59.702 63.158 0.00 0.00 0.00 4.85
711 1111 1.298014 CCTCTCTCAACCACTGCCC 59.702 63.158 0.00 0.00 0.00 5.36
712 1112 1.298014 CTCTCTCAACCACTGCCCC 59.702 63.158 0.00 0.00 0.00 5.80
713 1113 1.152030 TCTCTCAACCACTGCCCCT 60.152 57.895 0.00 0.00 0.00 4.79
714 1114 0.768221 TCTCTCAACCACTGCCCCTT 60.768 55.000 0.00 0.00 0.00 3.95
715 1115 0.322008 CTCTCAACCACTGCCCCTTC 60.322 60.000 0.00 0.00 0.00 3.46
716 1116 1.059584 TCTCAACCACTGCCCCTTCA 61.060 55.000 0.00 0.00 0.00 3.02
717 1117 0.890996 CTCAACCACTGCCCCTTCAC 60.891 60.000 0.00 0.00 0.00 3.18
718 1118 1.903404 CAACCACTGCCCCTTCACC 60.903 63.158 0.00 0.00 0.00 4.02
719 1119 3.146828 AACCACTGCCCCTTCACCC 62.147 63.158 0.00 0.00 0.00 4.61
720 1120 4.366684 CCACTGCCCCTTCACCCC 62.367 72.222 0.00 0.00 0.00 4.95
721 1121 4.722700 CACTGCCCCTTCACCCCG 62.723 72.222 0.00 0.00 0.00 5.73
723 1123 3.006728 CTGCCCCTTCACCCCGTA 61.007 66.667 0.00 0.00 0.00 4.02
724 1124 3.006728 TGCCCCTTCACCCCGTAG 61.007 66.667 0.00 0.00 0.00 3.51
725 1125 4.484872 GCCCCTTCACCCCGTAGC 62.485 72.222 0.00 0.00 0.00 3.58
726 1126 3.006728 CCCCTTCACCCCGTAGCA 61.007 66.667 0.00 0.00 0.00 3.49
727 1127 2.598787 CCCCTTCACCCCGTAGCAA 61.599 63.158 0.00 0.00 0.00 3.91
728 1128 1.376812 CCCTTCACCCCGTAGCAAC 60.377 63.158 0.00 0.00 0.00 4.17
738 1138 3.124921 GTAGCAACGCACGGGCAT 61.125 61.111 11.77 0.00 41.24 4.40
739 1139 3.124270 TAGCAACGCACGGGCATG 61.124 61.111 11.77 9.58 41.24 4.06
740 1140 3.892740 TAGCAACGCACGGGCATGT 62.893 57.895 11.77 0.00 41.24 3.21
741 1141 4.341502 GCAACGCACGGGCATGTT 62.342 61.111 11.77 3.22 41.24 2.71
742 1142 2.334653 CAACGCACGGGCATGTTT 59.665 55.556 11.77 0.00 41.24 2.83
743 1143 1.729131 CAACGCACGGGCATGTTTC 60.729 57.895 11.77 0.00 41.24 2.78
744 1144 2.914908 AACGCACGGGCATGTTTCC 61.915 57.895 11.77 0.00 41.24 3.13
745 1145 3.055719 CGCACGGGCATGTTTCCT 61.056 61.111 11.77 0.00 41.24 3.36
746 1146 1.743623 CGCACGGGCATGTTTCCTA 60.744 57.895 11.77 0.00 41.24 2.94
747 1147 1.705337 CGCACGGGCATGTTTCCTAG 61.705 60.000 11.77 0.00 41.24 3.02
751 1151 2.676342 CACGGGCATGTTTCCTAGTTAC 59.324 50.000 0.00 0.00 0.00 2.50
769 1169 0.179094 ACTGCGTCACCGACAAGAAA 60.179 50.000 0.00 0.00 35.63 2.52
784 1184 6.257630 CCGACAAGAAAAACCACAATGAATTT 59.742 34.615 0.00 0.00 0.00 1.82
814 1214 2.602878 ACATGTTGTACCGAAGCTACG 58.397 47.619 0.00 0.00 0.00 3.51
841 1241 1.890876 TTGCACGTTGCTCCAGTAAT 58.109 45.000 10.54 0.00 45.31 1.89
897 1297 5.977129 ACTCAAGTAAATTTGCAACTTTCGG 59.023 36.000 16.97 6.95 31.21 4.30
1039 1446 3.898509 GCAGCACGGTGGTTGCAA 61.899 61.111 21.31 0.00 43.47 4.08
1257 1664 1.375908 GCTGACGAACCTGATGGCA 60.376 57.895 0.00 0.00 36.63 4.92
1522 1929 4.794169 ACGTTGTTAATTTGCTTGCTAGG 58.206 39.130 0.00 0.00 0.00 3.02
1527 1934 5.312895 TGTTAATTTGCTTGCTAGGAGTGA 58.687 37.500 0.00 0.00 0.00 3.41
1553 1960 3.608073 GTGCTGAGCGCGAATTTTAATTT 59.392 39.130 12.10 0.00 43.27 1.82
1554 1961 4.089923 GTGCTGAGCGCGAATTTTAATTTT 59.910 37.500 12.10 0.00 43.27 1.82
1555 1962 4.323336 TGCTGAGCGCGAATTTTAATTTTC 59.677 37.500 12.10 0.00 43.27 2.29
1557 1964 5.275464 GCTGAGCGCGAATTTTAATTTTCTC 60.275 40.000 12.10 2.01 0.00 2.87
1589 1996 6.869913 TGTACTGGTCCTTTAATGTTAAGTCG 59.130 38.462 0.00 0.00 0.00 4.18
1590 1997 5.861727 ACTGGTCCTTTAATGTTAAGTCGT 58.138 37.500 0.00 0.00 0.00 4.34
1591 1998 5.699458 ACTGGTCCTTTAATGTTAAGTCGTG 59.301 40.000 0.00 0.00 0.00 4.35
1593 2000 6.056884 TGGTCCTTTAATGTTAAGTCGTGTT 58.943 36.000 0.00 0.00 0.00 3.32
1594 2001 6.017770 TGGTCCTTTAATGTTAAGTCGTGTTG 60.018 38.462 0.00 0.00 0.00 3.33
1595 2002 6.017687 GGTCCTTTAATGTTAAGTCGTGTTGT 60.018 38.462 0.00 0.00 0.00 3.32
1596 2003 7.171337 GGTCCTTTAATGTTAAGTCGTGTTGTA 59.829 37.037 0.00 0.00 0.00 2.41
1597 2004 8.550376 GTCCTTTAATGTTAAGTCGTGTTGTAA 58.450 33.333 0.00 0.00 0.00 2.41
1598 2005 8.550376 TCCTTTAATGTTAAGTCGTGTTGTAAC 58.450 33.333 0.00 0.00 0.00 2.50
1602 2009 6.913873 ATGTTAAGTCGTGTTGTAACTGTT 57.086 33.333 0.00 0.00 0.00 3.16
1604 2011 5.868258 TGTTAAGTCGTGTTGTAACTGTTGA 59.132 36.000 2.69 0.00 0.00 3.18
1605 2012 4.852609 AAGTCGTGTTGTAACTGTTGAC 57.147 40.909 2.69 0.28 0.00 3.18
1606 2013 2.855963 AGTCGTGTTGTAACTGTTGACG 59.144 45.455 2.69 4.31 0.00 4.35
1607 2014 2.599973 GTCGTGTTGTAACTGTTGACGT 59.400 45.455 2.69 0.00 0.00 4.34
1608 2015 3.790820 GTCGTGTTGTAACTGTTGACGTA 59.209 43.478 2.69 0.00 0.00 3.57
1612 2019 6.862608 TCGTGTTGTAACTGTTGACGTATAAT 59.137 34.615 2.69 0.00 0.00 1.28
1613 2020 6.946037 CGTGTTGTAACTGTTGACGTATAATG 59.054 38.462 2.69 0.00 0.00 1.90
1614 2021 7.358600 CGTGTTGTAACTGTTGACGTATAATGT 60.359 37.037 2.69 0.00 0.00 2.71
1615 2022 7.738609 GTGTTGTAACTGTTGACGTATAATGTG 59.261 37.037 2.69 0.00 0.00 3.21
1616 2023 6.397831 TGTAACTGTTGACGTATAATGTGC 57.602 37.500 2.69 0.00 0.00 4.57
1617 2024 6.160684 TGTAACTGTTGACGTATAATGTGCT 58.839 36.000 2.69 0.00 0.00 4.40
1618 2025 5.530519 AACTGTTGACGTATAATGTGCTG 57.469 39.130 0.00 0.00 0.00 4.41
1619 2026 3.370978 ACTGTTGACGTATAATGTGCTGC 59.629 43.478 0.00 0.00 0.00 5.25
1620 2027 2.675844 TGTTGACGTATAATGTGCTGCC 59.324 45.455 0.00 0.00 0.00 4.85
1621 2028 2.936498 GTTGACGTATAATGTGCTGCCT 59.064 45.455 0.00 0.00 0.00 4.75
1622 2029 4.116961 GTTGACGTATAATGTGCTGCCTA 58.883 43.478 0.00 0.00 0.00 3.93
1623 2030 3.977427 TGACGTATAATGTGCTGCCTAG 58.023 45.455 0.00 0.00 0.00 3.02
1624 2031 3.383505 TGACGTATAATGTGCTGCCTAGT 59.616 43.478 0.00 0.00 0.00 2.57
1625 2032 3.978687 ACGTATAATGTGCTGCCTAGTC 58.021 45.455 0.00 0.00 0.00 2.59
1626 2033 3.637229 ACGTATAATGTGCTGCCTAGTCT 59.363 43.478 0.00 0.00 0.00 3.24
1627 2034 4.230657 CGTATAATGTGCTGCCTAGTCTC 58.769 47.826 0.00 0.00 0.00 3.36
1628 2035 4.022762 CGTATAATGTGCTGCCTAGTCTCT 60.023 45.833 0.00 0.00 0.00 3.10
1629 2036 5.508153 CGTATAATGTGCTGCCTAGTCTCTT 60.508 44.000 0.00 0.00 0.00 2.85
1630 2037 3.710209 AATGTGCTGCCTAGTCTCTTT 57.290 42.857 0.00 0.00 0.00 2.52
1631 2038 2.751166 TGTGCTGCCTAGTCTCTTTC 57.249 50.000 0.00 0.00 0.00 2.62
1632 2039 1.970640 TGTGCTGCCTAGTCTCTTTCA 59.029 47.619 0.00 0.00 0.00 2.69
1633 2040 2.568956 TGTGCTGCCTAGTCTCTTTCAT 59.431 45.455 0.00 0.00 0.00 2.57
1634 2041 3.194062 GTGCTGCCTAGTCTCTTTCATC 58.806 50.000 0.00 0.00 0.00 2.92
1635 2042 2.833943 TGCTGCCTAGTCTCTTTCATCA 59.166 45.455 0.00 0.00 0.00 3.07
1636 2043 3.118847 TGCTGCCTAGTCTCTTTCATCAG 60.119 47.826 0.00 0.00 0.00 2.90
1637 2044 3.131933 GCTGCCTAGTCTCTTTCATCAGA 59.868 47.826 0.00 0.00 0.00 3.27
1638 2045 4.202243 GCTGCCTAGTCTCTTTCATCAGAT 60.202 45.833 0.00 0.00 0.00 2.90
1639 2046 5.684552 GCTGCCTAGTCTCTTTCATCAGATT 60.685 44.000 0.00 0.00 0.00 2.40
1640 2047 5.668471 TGCCTAGTCTCTTTCATCAGATTG 58.332 41.667 0.00 0.00 0.00 2.67
1641 2048 5.055812 GCCTAGTCTCTTTCATCAGATTGG 58.944 45.833 0.00 0.00 0.00 3.16
1642 2049 5.396213 GCCTAGTCTCTTTCATCAGATTGGT 60.396 44.000 0.00 0.00 0.00 3.67
1643 2050 6.279882 CCTAGTCTCTTTCATCAGATTGGTC 58.720 44.000 0.00 0.00 0.00 4.02
1644 2051 6.098124 CCTAGTCTCTTTCATCAGATTGGTCT 59.902 42.308 0.00 0.00 34.14 3.85
1645 2052 6.371595 AGTCTCTTTCATCAGATTGGTCTT 57.628 37.500 0.00 0.00 30.42 3.01
1646 2053 6.777782 AGTCTCTTTCATCAGATTGGTCTTT 58.222 36.000 0.00 0.00 30.42 2.52
1647 2054 7.230027 AGTCTCTTTCATCAGATTGGTCTTTT 58.770 34.615 0.00 0.00 30.42 2.27
1648 2055 7.174599 AGTCTCTTTCATCAGATTGGTCTTTTG 59.825 37.037 0.00 0.00 30.42 2.44
1649 2056 6.432162 TCTCTTTCATCAGATTGGTCTTTTGG 59.568 38.462 0.00 0.00 30.42 3.28
1650 2057 6.070656 TCTTTCATCAGATTGGTCTTTTGGT 58.929 36.000 0.00 0.00 30.42 3.67
1651 2058 6.550854 TCTTTCATCAGATTGGTCTTTTGGTT 59.449 34.615 0.00 0.00 30.42 3.67
1652 2059 5.710513 TCATCAGATTGGTCTTTTGGTTG 57.289 39.130 0.00 0.00 30.42 3.77
1653 2060 4.022068 TCATCAGATTGGTCTTTTGGTTGC 60.022 41.667 0.00 0.00 30.42 4.17
1654 2061 3.295093 TCAGATTGGTCTTTTGGTTGCA 58.705 40.909 0.00 0.00 30.42 4.08
1655 2062 3.896888 TCAGATTGGTCTTTTGGTTGCAT 59.103 39.130 0.00 0.00 30.42 3.96
1656 2063 4.344679 TCAGATTGGTCTTTTGGTTGCATT 59.655 37.500 0.00 0.00 30.42 3.56
1657 2064 5.538053 TCAGATTGGTCTTTTGGTTGCATTA 59.462 36.000 0.00 0.00 30.42 1.90
1658 2065 5.865552 CAGATTGGTCTTTTGGTTGCATTAG 59.134 40.000 0.00 0.00 30.42 1.73
1659 2066 3.658757 TGGTCTTTTGGTTGCATTAGC 57.341 42.857 0.00 0.00 42.57 3.09
1660 2067 3.230134 TGGTCTTTTGGTTGCATTAGCT 58.770 40.909 0.00 0.00 42.74 3.32
1661 2068 4.402829 TGGTCTTTTGGTTGCATTAGCTA 58.597 39.130 0.00 0.00 42.74 3.32
1662 2069 4.458989 TGGTCTTTTGGTTGCATTAGCTAG 59.541 41.667 0.00 0.00 42.74 3.42
1663 2070 4.700213 GGTCTTTTGGTTGCATTAGCTAGA 59.300 41.667 0.00 0.00 42.74 2.43
1664 2071 5.163713 GGTCTTTTGGTTGCATTAGCTAGAG 60.164 44.000 0.00 0.00 42.74 2.43
1665 2072 4.396166 TCTTTTGGTTGCATTAGCTAGAGC 59.604 41.667 11.35 11.35 42.74 4.09
1666 2073 3.348647 TTGGTTGCATTAGCTAGAGCA 57.651 42.857 15.62 15.62 45.16 4.26
1667 2074 3.565764 TGGTTGCATTAGCTAGAGCAT 57.434 42.857 18.96 0.00 45.16 3.79
1668 2075 3.208594 TGGTTGCATTAGCTAGAGCATG 58.791 45.455 18.96 10.10 45.16 4.06
1669 2076 2.031333 GGTTGCATTAGCTAGAGCATGC 60.031 50.000 18.96 18.24 45.25 4.06
1671 2078 2.965477 GCATTAGCTAGAGCATGCAC 57.035 50.000 21.98 14.59 44.74 4.57
1672 2079 2.492012 GCATTAGCTAGAGCATGCACT 58.508 47.619 21.45 21.45 44.74 4.40
1673 2080 2.877168 GCATTAGCTAGAGCATGCACTT 59.123 45.455 22.83 7.95 44.74 3.16
1674 2081 3.059051 GCATTAGCTAGAGCATGCACTTC 60.059 47.826 22.83 14.51 44.74 3.01
1675 2082 4.378774 CATTAGCTAGAGCATGCACTTCT 58.621 43.478 22.83 20.02 45.16 2.85
1676 2083 5.536260 CATTAGCTAGAGCATGCACTTCTA 58.464 41.667 22.83 19.12 45.16 2.10
1677 2084 3.451141 AGCTAGAGCATGCACTTCTAC 57.549 47.619 22.83 12.85 45.16 2.59
1678 2085 2.762887 AGCTAGAGCATGCACTTCTACA 59.237 45.455 22.83 3.70 45.16 2.74
1679 2086 3.387374 AGCTAGAGCATGCACTTCTACAT 59.613 43.478 22.83 6.01 45.16 2.29
1680 2087 4.125703 GCTAGAGCATGCACTTCTACATT 58.874 43.478 22.83 0.00 41.59 2.71
1681 2088 4.025061 GCTAGAGCATGCACTTCTACATTG 60.025 45.833 22.83 8.58 41.59 2.82
1682 2089 3.947868 AGAGCATGCACTTCTACATTGT 58.052 40.909 21.98 0.00 0.00 2.71
1683 2090 5.089970 AGAGCATGCACTTCTACATTGTA 57.910 39.130 21.98 0.00 0.00 2.41
1684 2091 5.678583 AGAGCATGCACTTCTACATTGTAT 58.321 37.500 21.98 0.00 0.00 2.29
1685 2092 5.757320 AGAGCATGCACTTCTACATTGTATC 59.243 40.000 21.98 2.25 0.00 2.24
1686 2093 5.430886 AGCATGCACTTCTACATTGTATCA 58.569 37.500 21.98 0.00 0.00 2.15
1687 2094 5.526479 AGCATGCACTTCTACATTGTATCAG 59.474 40.000 21.98 0.00 0.00 2.90
1688 2095 5.525012 GCATGCACTTCTACATTGTATCAGA 59.475 40.000 14.21 0.00 0.00 3.27
1689 2096 6.292757 GCATGCACTTCTACATTGTATCAGAG 60.293 42.308 14.21 0.00 0.00 3.35
1690 2097 5.111989 TGCACTTCTACATTGTATCAGAGC 58.888 41.667 13.41 13.41 0.00 4.09
1691 2098 4.509600 GCACTTCTACATTGTATCAGAGCC 59.490 45.833 10.94 0.10 0.00 4.70
1692 2099 5.664457 CACTTCTACATTGTATCAGAGCCA 58.336 41.667 0.00 0.00 0.00 4.75
1693 2100 6.108687 CACTTCTACATTGTATCAGAGCCAA 58.891 40.000 0.00 0.00 0.00 4.52
1694 2101 6.257411 CACTTCTACATTGTATCAGAGCCAAG 59.743 42.308 0.00 0.00 0.00 3.61
1695 2102 6.155221 ACTTCTACATTGTATCAGAGCCAAGA 59.845 38.462 0.00 0.00 0.00 3.02
1696 2103 6.737720 TCTACATTGTATCAGAGCCAAGAT 57.262 37.500 0.00 0.00 0.00 2.40
1697 2104 6.519382 TCTACATTGTATCAGAGCCAAGATG 58.481 40.000 0.00 0.00 0.00 2.90
1698 2105 5.108187 ACATTGTATCAGAGCCAAGATGT 57.892 39.130 0.00 0.00 0.00 3.06
1699 2106 5.121811 ACATTGTATCAGAGCCAAGATGTC 58.878 41.667 0.00 0.00 0.00 3.06
1700 2107 5.104610 ACATTGTATCAGAGCCAAGATGTCT 60.105 40.000 0.00 0.00 0.00 3.41
1701 2108 5.426689 TTGTATCAGAGCCAAGATGTCTT 57.573 39.130 0.00 0.00 36.45 3.01
1702 2109 5.426689 TGTATCAGAGCCAAGATGTCTTT 57.573 39.130 0.00 0.00 33.11 2.52
1703 2110 5.181009 TGTATCAGAGCCAAGATGTCTTTG 58.819 41.667 0.00 0.00 33.11 2.77
1704 2111 2.430465 TCAGAGCCAAGATGTCTTTGC 58.570 47.619 9.99 9.99 42.80 3.68
1705 2112 2.156917 CAGAGCCAAGATGTCTTTGCA 58.843 47.619 17.67 0.00 44.30 4.08
1706 2113 2.095364 CAGAGCCAAGATGTCTTTGCAC 60.095 50.000 17.67 12.74 44.30 4.57
1707 2114 2.157738 GAGCCAAGATGTCTTTGCACT 58.842 47.619 17.67 2.01 44.30 4.40
1708 2115 2.555757 GAGCCAAGATGTCTTTGCACTT 59.444 45.455 17.67 1.41 44.30 3.16
1709 2116 2.555757 AGCCAAGATGTCTTTGCACTTC 59.444 45.455 17.67 0.00 44.30 3.01
1710 2117 2.555757 GCCAAGATGTCTTTGCACTTCT 59.444 45.455 12.39 0.00 42.26 2.85
1711 2118 3.753272 GCCAAGATGTCTTTGCACTTCTA 59.247 43.478 12.39 0.00 42.26 2.10
1712 2119 4.378874 GCCAAGATGTCTTTGCACTTCTAC 60.379 45.833 12.39 0.00 42.26 2.59
1713 2120 4.756642 CCAAGATGTCTTTGCACTTCTACA 59.243 41.667 0.00 0.00 33.11 2.74
1714 2121 5.106791 CCAAGATGTCTTTGCACTTCTACAG 60.107 44.000 0.00 0.00 33.11 2.74
1715 2122 5.220710 AGATGTCTTTGCACTTCTACAGT 57.779 39.130 0.00 0.00 35.35 3.55
1716 2123 6.346477 AGATGTCTTTGCACTTCTACAGTA 57.654 37.500 0.00 0.00 32.76 2.74
1717 2124 6.759272 AGATGTCTTTGCACTTCTACAGTAA 58.241 36.000 0.00 0.00 32.76 2.24
1718 2125 7.390027 AGATGTCTTTGCACTTCTACAGTAAT 58.610 34.615 0.00 0.00 32.76 1.89
1747 2154 3.649986 GTTCGGTGCTTGCTGCGT 61.650 61.111 0.00 0.00 46.63 5.24
1750 2157 1.565156 TTCGGTGCTTGCTGCGTTAG 61.565 55.000 0.00 0.00 46.63 2.34
1850 2295 6.538742 TGCAGCTTTACAAGTATCATAGTTCC 59.461 38.462 0.00 0.00 0.00 3.62
1852 2297 6.201044 CAGCTTTACAAGTATCATAGTTCCGG 59.799 42.308 0.00 0.00 0.00 5.14
1925 2370 8.980481 AAAGAGTGATTGAGAGGAAAAACTTA 57.020 30.769 0.00 0.00 0.00 2.24
1977 2422 6.602179 TCGTCAATTGATCTGAAATCAACAC 58.398 36.000 12.12 0.00 40.37 3.32
2346 2950 9.699410 TTAAATAGCTACAACCTAGTACTACCA 57.301 33.333 0.00 0.00 0.00 3.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 2.545537 TGCCATTCAAATTGCTTGCA 57.454 40.000 0.00 0.00 34.76 4.08
148 149 7.514573 AAATCACGACGCTTTTTAAGTTTTT 57.485 28.000 0.00 0.00 0.00 1.94
151 152 8.791355 ATAAAAATCACGACGCTTTTTAAGTT 57.209 26.923 18.78 7.70 37.67 2.66
152 153 8.071368 TGATAAAAATCACGACGCTTTTTAAGT 58.929 29.630 18.78 9.81 37.67 2.24
153 154 8.429739 TGATAAAAATCACGACGCTTTTTAAG 57.570 30.769 18.78 0.00 37.67 1.85
154 155 8.958175 ATGATAAAAATCACGACGCTTTTTAA 57.042 26.923 18.78 10.07 37.67 1.52
155 156 8.231161 TGATGATAAAAATCACGACGCTTTTTA 58.769 29.630 17.89 17.89 38.18 1.52
243 643 1.324736 CGCCTCACTTCAATAAGACGC 59.675 52.381 0.00 0.00 36.50 5.19
298 698 7.818642 TCTTCAAGAGTAGCTACTAACTCAAC 58.181 38.462 26.11 11.91 36.50 3.18
310 710 9.766277 CTTTGAAACATATTCTTCAAGAGTAGC 57.234 33.333 8.33 0.00 41.30 3.58
326 726 6.200854 GCCAATTTTTCTCGACTTTGAAACAT 59.799 34.615 0.00 0.00 32.72 2.71
358 758 2.305927 CTCTAACCATCCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
359 759 2.356125 CCTCTAACCATCCAACCACAGG 60.356 54.545 0.00 0.00 0.00 4.00
360 760 2.356125 CCCTCTAACCATCCAACCACAG 60.356 54.545 0.00 0.00 0.00 3.66
361 761 1.633432 CCCTCTAACCATCCAACCACA 59.367 52.381 0.00 0.00 0.00 4.17
362 762 1.913419 TCCCTCTAACCATCCAACCAC 59.087 52.381 0.00 0.00 0.00 4.16
363 763 1.913419 GTCCCTCTAACCATCCAACCA 59.087 52.381 0.00 0.00 0.00 3.67
364 764 1.913419 TGTCCCTCTAACCATCCAACC 59.087 52.381 0.00 0.00 0.00 3.77
365 765 2.572104 ACTGTCCCTCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
366 766 2.571653 CACTGTCCCTCTAACCATCCAA 59.428 50.000 0.00 0.00 0.00 3.53
367 767 2.187958 CACTGTCCCTCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
368 768 1.486726 CCACTGTCCCTCTAACCATCC 59.513 57.143 0.00 0.00 0.00 3.51
369 769 1.134371 GCCACTGTCCCTCTAACCATC 60.134 57.143 0.00 0.00 0.00 3.51
370 770 0.912486 GCCACTGTCCCTCTAACCAT 59.088 55.000 0.00 0.00 0.00 3.55
371 771 0.472925 TGCCACTGTCCCTCTAACCA 60.473 55.000 0.00 0.00 0.00 3.67
372 772 0.912486 ATGCCACTGTCCCTCTAACC 59.088 55.000 0.00 0.00 0.00 2.85
373 773 1.134371 GGATGCCACTGTCCCTCTAAC 60.134 57.143 0.00 0.00 0.00 2.34
374 774 1.204146 GGATGCCACTGTCCCTCTAA 58.796 55.000 0.00 0.00 0.00 2.10
375 775 2.916355 GGATGCCACTGTCCCTCTA 58.084 57.895 0.00 0.00 0.00 2.43
376 776 3.732938 GGATGCCACTGTCCCTCT 58.267 61.111 0.00 0.00 0.00 3.69
380 780 2.273449 CTGGGGATGCCACTGTCC 59.727 66.667 5.30 0.00 0.00 4.02
381 781 2.439156 GCTGGGGATGCCACTGTC 60.439 66.667 5.30 0.00 0.00 3.51
388 788 4.828296 CTGGTGGGCTGGGGATGC 62.828 72.222 0.00 0.00 0.00 3.91
389 789 4.133373 CCTGGTGGGCTGGGGATG 62.133 72.222 0.00 0.00 0.00 3.51
390 790 3.683017 ATCCTGGTGGGCTGGGGAT 62.683 63.158 0.00 0.00 34.39 3.85
391 791 3.908712 AATCCTGGTGGGCTGGGGA 62.909 63.158 0.00 0.00 34.39 4.81
392 792 3.350163 AATCCTGGTGGGCTGGGG 61.350 66.667 0.00 0.00 34.39 4.96
393 793 2.153898 TTGAATCCTGGTGGGCTGGG 62.154 60.000 0.00 0.00 34.39 4.45
394 794 0.682209 CTTGAATCCTGGTGGGCTGG 60.682 60.000 0.00 0.00 34.39 4.85
395 795 0.038744 ACTTGAATCCTGGTGGGCTG 59.961 55.000 0.00 0.00 34.39 4.85
396 796 0.329596 GACTTGAATCCTGGTGGGCT 59.670 55.000 0.00 0.00 34.39 5.19
397 797 0.681243 GGACTTGAATCCTGGTGGGC 60.681 60.000 0.00 0.00 35.68 5.36
398 798 3.577389 GGACTTGAATCCTGGTGGG 57.423 57.895 0.00 0.00 35.68 4.61
405 805 1.377536 GAGCAGCAGGACTTGAATCC 58.622 55.000 0.00 0.00 39.28 3.01
406 806 1.005340 CGAGCAGCAGGACTTGAATC 58.995 55.000 0.00 0.00 0.00 2.52
407 807 3.149899 CGAGCAGCAGGACTTGAAT 57.850 52.632 0.00 0.00 0.00 2.57
408 808 4.681421 CGAGCAGCAGGACTTGAA 57.319 55.556 0.00 0.00 0.00 2.69
419 819 2.245159 TCCAGGAATAATGCGAGCAG 57.755 50.000 3.58 0.00 0.00 4.24
420 820 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
421 821 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
422 822 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
423 823 7.815840 TGAAATAAATCCAGGAATAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
433 833 5.010012 CCGGAATTCCTGAAATAAATCCAGG 59.990 44.000 22.05 6.88 46.64 4.45
434 834 5.507985 GCCGGAATTCCTGAAATAAATCCAG 60.508 44.000 22.05 1.42 0.00 3.86
435 835 4.340950 GCCGGAATTCCTGAAATAAATCCA 59.659 41.667 22.05 0.00 0.00 3.41
436 836 4.556699 CGCCGGAATTCCTGAAATAAATCC 60.557 45.833 22.05 0.00 0.00 3.01
437 837 4.274950 TCGCCGGAATTCCTGAAATAAATC 59.725 41.667 22.05 0.01 0.00 2.17
438 838 4.204012 TCGCCGGAATTCCTGAAATAAAT 58.796 39.130 22.05 0.00 0.00 1.40
439 839 3.611970 TCGCCGGAATTCCTGAAATAAA 58.388 40.909 22.05 0.00 0.00 1.40
440 840 3.269538 TCGCCGGAATTCCTGAAATAA 57.730 42.857 22.05 0.00 0.00 1.40
441 841 2.992124 TCGCCGGAATTCCTGAAATA 57.008 45.000 22.05 0.36 0.00 1.40
442 842 1.949525 CATCGCCGGAATTCCTGAAAT 59.050 47.619 22.05 9.72 0.00 2.17
443 843 1.339631 ACATCGCCGGAATTCCTGAAA 60.340 47.619 22.05 7.87 0.00 2.69
444 844 0.251916 ACATCGCCGGAATTCCTGAA 59.748 50.000 22.05 8.21 0.00 3.02
445 845 0.461870 CACATCGCCGGAATTCCTGA 60.462 55.000 22.05 16.36 0.00 3.86
446 846 0.744414 ACACATCGCCGGAATTCCTG 60.744 55.000 22.05 16.73 0.00 3.86
447 847 0.035439 AACACATCGCCGGAATTCCT 60.035 50.000 22.05 0.00 0.00 3.36
448 848 0.808755 AAACACATCGCCGGAATTCC 59.191 50.000 15.01 15.01 0.00 3.01
449 849 2.095466 TGAAAACACATCGCCGGAATTC 60.095 45.455 5.05 0.00 0.00 2.17
450 850 1.883275 TGAAAACACATCGCCGGAATT 59.117 42.857 5.05 0.00 0.00 2.17
451 851 1.468520 CTGAAAACACATCGCCGGAAT 59.531 47.619 5.05 0.00 0.00 3.01
452 852 0.871722 CTGAAAACACATCGCCGGAA 59.128 50.000 5.05 0.00 0.00 4.30
453 853 0.250124 ACTGAAAACACATCGCCGGA 60.250 50.000 5.05 0.00 0.00 5.14
454 854 0.110238 CACTGAAAACACATCGCCGG 60.110 55.000 0.00 0.00 0.00 6.13
455 855 0.110238 CCACTGAAAACACATCGCCG 60.110 55.000 0.00 0.00 0.00 6.46
456 856 0.240945 CCCACTGAAAACACATCGCC 59.759 55.000 0.00 0.00 0.00 5.54
457 857 1.197721 CTCCCACTGAAAACACATCGC 59.802 52.381 0.00 0.00 0.00 4.58
458 858 2.766313 TCTCCCACTGAAAACACATCG 58.234 47.619 0.00 0.00 0.00 3.84
459 859 4.214332 GTCTTCTCCCACTGAAAACACATC 59.786 45.833 0.00 0.00 0.00 3.06
460 860 4.137543 GTCTTCTCCCACTGAAAACACAT 58.862 43.478 0.00 0.00 0.00 3.21
461 861 3.541632 GTCTTCTCCCACTGAAAACACA 58.458 45.455 0.00 0.00 0.00 3.72
462 862 2.544267 CGTCTTCTCCCACTGAAAACAC 59.456 50.000 0.00 0.00 0.00 3.32
463 863 2.169769 ACGTCTTCTCCCACTGAAAACA 59.830 45.455 0.00 0.00 0.00 2.83
464 864 2.835027 ACGTCTTCTCCCACTGAAAAC 58.165 47.619 0.00 0.00 0.00 2.43
465 865 3.463944 GAACGTCTTCTCCCACTGAAAA 58.536 45.455 0.00 0.00 0.00 2.29
466 866 2.224209 GGAACGTCTTCTCCCACTGAAA 60.224 50.000 0.00 0.00 0.00 2.69
467 867 1.343465 GGAACGTCTTCTCCCACTGAA 59.657 52.381 0.00 0.00 0.00 3.02
468 868 0.966920 GGAACGTCTTCTCCCACTGA 59.033 55.000 0.00 0.00 0.00 3.41
469 869 3.516578 GGAACGTCTTCTCCCACTG 57.483 57.895 0.00 0.00 0.00 3.66
483 883 2.484203 CTCCTCGTCGACGGGAAC 59.516 66.667 37.97 0.00 43.86 3.62
484 884 2.749044 CCTCCTCGTCGACGGGAA 60.749 66.667 37.97 19.87 43.86 3.97
487 887 4.477975 GTGCCTCCTCGTCGACGG 62.478 72.222 35.05 24.95 40.29 4.79
488 888 4.477975 GGTGCCTCCTCGTCGACG 62.478 72.222 31.30 31.30 41.45 5.12
489 889 1.748122 TAGGTGCCTCCTCGTCGAC 60.748 63.158 5.18 5.18 44.42 4.20
490 890 1.748122 GTAGGTGCCTCCTCGTCGA 60.748 63.158 0.67 0.00 44.42 4.20
491 891 2.799371 GTAGGTGCCTCCTCGTCG 59.201 66.667 0.67 0.00 44.42 5.12
492 892 2.772691 CCGTAGGTGCCTCCTCGTC 61.773 68.421 0.67 0.00 44.42 4.20
493 893 2.754658 CCGTAGGTGCCTCCTCGT 60.755 66.667 0.67 0.00 44.42 4.18
507 907 9.173021 TCATTTTGATATTTATGAAGTCACCGT 57.827 29.630 0.00 0.00 0.00 4.83
516 916 8.190122 GCCGGCATATCATTTTGATATTTATGA 58.810 33.333 24.80 0.00 45.10 2.15
517 917 8.192774 AGCCGGCATATCATTTTGATATTTATG 58.807 33.333 31.54 1.71 45.10 1.90
518 918 8.297470 AGCCGGCATATCATTTTGATATTTAT 57.703 30.769 31.54 0.00 45.10 1.40
519 919 7.392953 TGAGCCGGCATATCATTTTGATATTTA 59.607 33.333 31.54 0.00 45.10 1.40
520 920 6.209192 TGAGCCGGCATATCATTTTGATATTT 59.791 34.615 31.54 0.00 45.10 1.40
521 921 5.711506 TGAGCCGGCATATCATTTTGATATT 59.288 36.000 31.54 0.00 45.10 1.28
523 923 4.650734 TGAGCCGGCATATCATTTTGATA 58.349 39.130 31.54 0.05 42.83 2.15
524 924 3.489355 TGAGCCGGCATATCATTTTGAT 58.511 40.909 31.54 1.45 40.72 2.57
525 925 2.880268 CTGAGCCGGCATATCATTTTGA 59.120 45.455 31.54 0.00 0.00 2.69
526 926 2.620115 ACTGAGCCGGCATATCATTTTG 59.380 45.455 31.54 13.72 0.00 2.44
527 927 2.880890 GACTGAGCCGGCATATCATTTT 59.119 45.455 31.54 10.68 0.00 1.82
528 928 2.105477 AGACTGAGCCGGCATATCATTT 59.895 45.455 31.54 13.22 0.00 2.32
529 929 1.696336 AGACTGAGCCGGCATATCATT 59.304 47.619 31.54 17.84 0.00 2.57
530 930 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
531 931 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
532 932 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
533 933 0.965439 GAGAGACTGAGCCGGCATAT 59.035 55.000 31.54 8.11 0.00 1.78
534 934 1.448119 CGAGAGACTGAGCCGGCATA 61.448 60.000 31.54 16.21 0.00 3.14
535 935 2.780094 CGAGAGACTGAGCCGGCAT 61.780 63.158 31.54 14.28 0.00 4.40
536 936 3.443925 CGAGAGACTGAGCCGGCA 61.444 66.667 31.54 7.98 0.00 5.69
537 937 4.200283 CCGAGAGACTGAGCCGGC 62.200 72.222 21.89 21.89 33.47 6.13
538 938 1.999071 CTTCCGAGAGACTGAGCCGG 61.999 65.000 0.00 0.00 41.36 6.13
539 939 1.309499 ACTTCCGAGAGACTGAGCCG 61.309 60.000 0.00 0.00 0.00 5.52
540 940 0.172352 CACTTCCGAGAGACTGAGCC 59.828 60.000 0.00 0.00 0.00 4.70
541 941 0.457681 GCACTTCCGAGAGACTGAGC 60.458 60.000 0.00 0.00 0.00 4.26
542 942 1.132262 GAGCACTTCCGAGAGACTGAG 59.868 57.143 0.00 0.00 0.00 3.35
543 943 1.169577 GAGCACTTCCGAGAGACTGA 58.830 55.000 0.00 0.00 0.00 3.41
544 944 0.884514 TGAGCACTTCCGAGAGACTG 59.115 55.000 0.00 0.00 0.00 3.51
545 945 1.846007 ATGAGCACTTCCGAGAGACT 58.154 50.000 0.00 0.00 0.00 3.24
546 946 2.034053 CCTATGAGCACTTCCGAGAGAC 59.966 54.545 0.00 0.00 0.00 3.36
547 947 2.302260 CCTATGAGCACTTCCGAGAGA 58.698 52.381 0.00 0.00 0.00 3.10
548 948 1.339610 CCCTATGAGCACTTCCGAGAG 59.660 57.143 0.00 0.00 0.00 3.20
549 949 1.403814 CCCTATGAGCACTTCCGAGA 58.596 55.000 0.00 0.00 0.00 4.04
550 950 0.390860 CCCCTATGAGCACTTCCGAG 59.609 60.000 0.00 0.00 0.00 4.63
551 951 0.325296 ACCCCTATGAGCACTTCCGA 60.325 55.000 0.00 0.00 0.00 4.55
552 952 1.341531 CTACCCCTATGAGCACTTCCG 59.658 57.143 0.00 0.00 0.00 4.30
553 953 1.694696 CCTACCCCTATGAGCACTTCC 59.305 57.143 0.00 0.00 0.00 3.46
554 954 1.694696 CCCTACCCCTATGAGCACTTC 59.305 57.143 0.00 0.00 0.00 3.01
555 955 1.009675 ACCCTACCCCTATGAGCACTT 59.990 52.381 0.00 0.00 0.00 3.16
556 956 0.642710 ACCCTACCCCTATGAGCACT 59.357 55.000 0.00 0.00 0.00 4.40
557 957 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
558 958 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
559 959 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
560 960 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
561 961 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
562 962 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
563 963 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
564 964 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
565 965 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
566 966 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
567 967 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
568 968 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
569 969 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
570 970 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
573 973 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
574 974 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
575 975 2.815647 TGAACGCACACACGCACA 60.816 55.556 0.00 0.00 36.19 4.57
576 976 2.350760 GTGAACGCACACACGCAC 60.351 61.111 7.53 0.00 44.51 5.34
591 991 1.070821 CACATACACTCACCGCTGTG 58.929 55.000 1.20 1.20 44.18 3.66
592 992 0.670546 GCACATACACTCACCGCTGT 60.671 55.000 0.00 0.00 0.00 4.40
593 993 0.670239 TGCACATACACTCACCGCTG 60.670 55.000 0.00 0.00 0.00 5.18
594 994 0.250234 ATGCACATACACTCACCGCT 59.750 50.000 0.00 0.00 0.00 5.52
595 995 1.934589 TATGCACATACACTCACCGC 58.065 50.000 0.00 0.00 0.00 5.68
596 996 3.457234 ACATATGCACATACACTCACCG 58.543 45.455 1.58 0.00 0.00 4.94
597 997 6.223120 TCATACATATGCACATACACTCACC 58.777 40.000 1.58 0.00 33.76 4.02
598 998 6.128715 GCTCATACATATGCACATACACTCAC 60.129 42.308 1.58 0.00 33.76 3.51
599 999 5.928264 GCTCATACATATGCACATACACTCA 59.072 40.000 1.58 0.00 33.76 3.41
600 1000 5.061435 CGCTCATACATATGCACATACACTC 59.939 44.000 1.58 0.00 33.76 3.51
601 1001 4.925646 CGCTCATACATATGCACATACACT 59.074 41.667 1.58 0.00 33.76 3.55
602 1002 4.434725 GCGCTCATACATATGCACATACAC 60.435 45.833 0.00 0.00 33.76 2.90
603 1003 3.679502 GCGCTCATACATATGCACATACA 59.320 43.478 0.00 0.00 33.76 2.29
604 1004 3.928992 AGCGCTCATACATATGCACATAC 59.071 43.478 2.64 0.00 33.76 2.39
605 1005 4.192429 AGCGCTCATACATATGCACATA 57.808 40.909 2.64 0.00 33.76 2.29
606 1006 3.049708 AGCGCTCATACATATGCACAT 57.950 42.857 2.64 0.00 33.76 3.21
607 1007 2.531522 AGCGCTCATACATATGCACA 57.468 45.000 2.64 0.00 33.76 4.57
608 1008 2.159920 CGAAGCGCTCATACATATGCAC 60.160 50.000 12.06 0.00 33.76 4.57
609 1009 2.061028 CGAAGCGCTCATACATATGCA 58.939 47.619 12.06 0.00 33.76 3.96
610 1010 2.061773 ACGAAGCGCTCATACATATGC 58.938 47.619 12.06 0.00 33.76 3.14
611 1011 3.363128 CAGACGAAGCGCTCATACATATG 59.637 47.826 12.06 0.00 35.04 1.78
612 1012 3.004839 ACAGACGAAGCGCTCATACATAT 59.995 43.478 12.06 0.00 0.00 1.78
613 1013 2.357952 ACAGACGAAGCGCTCATACATA 59.642 45.455 12.06 0.00 0.00 2.29
614 1014 1.135139 ACAGACGAAGCGCTCATACAT 59.865 47.619 12.06 0.00 0.00 2.29
615 1015 0.526211 ACAGACGAAGCGCTCATACA 59.474 50.000 12.06 0.00 0.00 2.29
616 1016 2.110226 GTACAGACGAAGCGCTCATAC 58.890 52.381 12.06 3.20 0.00 2.39
617 1017 2.014857 AGTACAGACGAAGCGCTCATA 58.985 47.619 12.06 0.00 0.00 2.15
618 1018 0.811915 AGTACAGACGAAGCGCTCAT 59.188 50.000 12.06 0.00 0.00 2.90
619 1019 0.109735 CAGTACAGACGAAGCGCTCA 60.110 55.000 12.06 0.00 0.00 4.26
620 1020 0.109689 ACAGTACAGACGAAGCGCTC 60.110 55.000 12.06 3.22 0.00 5.03
621 1021 0.387367 CACAGTACAGACGAAGCGCT 60.387 55.000 2.64 2.64 0.00 5.92
622 1022 0.663568 ACACAGTACAGACGAAGCGC 60.664 55.000 0.00 0.00 0.00 5.92
623 1023 1.767289 AACACAGTACAGACGAAGCG 58.233 50.000 0.00 0.00 0.00 4.68
624 1024 5.646467 TTTTAACACAGTACAGACGAAGC 57.354 39.130 0.00 0.00 0.00 3.86
657 1057 2.158971 ACTTCCGCCAAGTGCAATTTTT 60.159 40.909 0.00 0.00 44.28 1.94
658 1058 1.412343 ACTTCCGCCAAGTGCAATTTT 59.588 42.857 0.00 0.00 44.28 1.82
659 1059 1.000274 GACTTCCGCCAAGTGCAATTT 60.000 47.619 0.00 0.00 46.10 1.82
660 1060 0.598065 GACTTCCGCCAAGTGCAATT 59.402 50.000 0.00 0.00 46.10 2.32
661 1061 2.257353 GACTTCCGCCAAGTGCAAT 58.743 52.632 2.93 0.00 46.10 3.56
662 1062 3.744559 GACTTCCGCCAAGTGCAA 58.255 55.556 2.93 0.00 46.10 4.08
665 1065 4.285851 GAGGACTTCCGCCAAGTG 57.714 61.111 2.93 0.00 46.10 3.16
673 1073 2.047179 GGTGCACGGAGGACTTCC 60.047 66.667 11.45 0.00 43.04 3.46
674 1074 1.668151 GTGGTGCACGGAGGACTTC 60.668 63.158 11.45 0.00 38.81 3.01
675 1075 2.426023 GTGGTGCACGGAGGACTT 59.574 61.111 11.45 0.00 38.81 3.01
676 1076 3.626924 GGTGGTGCACGGAGGACT 61.627 66.667 11.45 0.00 38.81 3.85
677 1077 4.699522 GGGTGGTGCACGGAGGAC 62.700 72.222 11.45 2.09 34.83 3.85
678 1078 4.954118 AGGGTGGTGCACGGAGGA 62.954 66.667 11.45 0.00 34.83 3.71
679 1079 4.394712 GAGGGTGGTGCACGGAGG 62.395 72.222 11.45 0.00 34.83 4.30
680 1080 3.302347 GAGAGGGTGGTGCACGGAG 62.302 68.421 11.45 0.00 34.83 4.63
681 1081 3.311110 GAGAGGGTGGTGCACGGA 61.311 66.667 11.45 0.00 34.83 4.69
682 1082 3.302347 GAGAGAGGGTGGTGCACGG 62.302 68.421 11.45 0.00 34.83 4.94
683 1083 2.099652 TTGAGAGAGGGTGGTGCACG 62.100 60.000 11.45 0.00 34.83 5.34
684 1084 0.603975 GTTGAGAGAGGGTGGTGCAC 60.604 60.000 8.80 8.80 0.00 4.57
685 1085 1.754745 GTTGAGAGAGGGTGGTGCA 59.245 57.895 0.00 0.00 0.00 4.57
686 1086 1.003233 GGTTGAGAGAGGGTGGTGC 60.003 63.158 0.00 0.00 0.00 5.01
687 1087 0.035458 GTGGTTGAGAGAGGGTGGTG 59.965 60.000 0.00 0.00 0.00 4.17
688 1088 0.104934 AGTGGTTGAGAGAGGGTGGT 60.105 55.000 0.00 0.00 0.00 4.16
689 1089 0.322975 CAGTGGTTGAGAGAGGGTGG 59.677 60.000 0.00 0.00 0.00 4.61
690 1090 0.321122 GCAGTGGTTGAGAGAGGGTG 60.321 60.000 0.00 0.00 0.00 4.61
691 1091 1.484444 GGCAGTGGTTGAGAGAGGGT 61.484 60.000 0.00 0.00 0.00 4.34
692 1092 1.298014 GGCAGTGGTTGAGAGAGGG 59.702 63.158 0.00 0.00 0.00 4.30
693 1093 1.298014 GGGCAGTGGTTGAGAGAGG 59.702 63.158 0.00 0.00 0.00 3.69
694 1094 1.197430 AGGGGCAGTGGTTGAGAGAG 61.197 60.000 0.00 0.00 0.00 3.20
695 1095 0.768221 AAGGGGCAGTGGTTGAGAGA 60.768 55.000 0.00 0.00 0.00 3.10
696 1096 0.322008 GAAGGGGCAGTGGTTGAGAG 60.322 60.000 0.00 0.00 0.00 3.20
697 1097 1.059584 TGAAGGGGCAGTGGTTGAGA 61.060 55.000 0.00 0.00 0.00 3.27
698 1098 0.890996 GTGAAGGGGCAGTGGTTGAG 60.891 60.000 0.00 0.00 0.00 3.02
699 1099 1.150536 GTGAAGGGGCAGTGGTTGA 59.849 57.895 0.00 0.00 0.00 3.18
700 1100 1.903404 GGTGAAGGGGCAGTGGTTG 60.903 63.158 0.00 0.00 0.00 3.77
701 1101 2.520968 GGTGAAGGGGCAGTGGTT 59.479 61.111 0.00 0.00 0.00 3.67
702 1102 3.580319 GGGTGAAGGGGCAGTGGT 61.580 66.667 0.00 0.00 0.00 4.16
703 1103 4.366684 GGGGTGAAGGGGCAGTGG 62.367 72.222 0.00 0.00 0.00 4.00
704 1104 4.722700 CGGGGTGAAGGGGCAGTG 62.723 72.222 0.00 0.00 0.00 3.66
705 1105 3.857521 TACGGGGTGAAGGGGCAGT 62.858 63.158 0.00 0.00 0.00 4.40
706 1106 3.006728 TACGGGGTGAAGGGGCAG 61.007 66.667 0.00 0.00 0.00 4.85
707 1107 3.006728 CTACGGGGTGAAGGGGCA 61.007 66.667 0.00 0.00 0.00 5.36
708 1108 4.484872 GCTACGGGGTGAAGGGGC 62.485 72.222 0.00 0.00 0.00 5.80
709 1109 2.598787 TTGCTACGGGGTGAAGGGG 61.599 63.158 0.00 0.00 0.00 4.79
710 1110 1.376812 GTTGCTACGGGGTGAAGGG 60.377 63.158 0.00 0.00 0.00 3.95
711 1111 1.740296 CGTTGCTACGGGGTGAAGG 60.740 63.158 13.04 0.00 43.94 3.46
712 1112 3.870606 CGTTGCTACGGGGTGAAG 58.129 61.111 13.04 0.00 43.94 3.02
721 1121 3.124921 ATGCCCGTGCGTTGCTAC 61.125 61.111 5.29 0.00 41.78 3.58
722 1122 3.124270 CATGCCCGTGCGTTGCTA 61.124 61.111 5.29 0.00 41.78 3.49
724 1124 3.839642 AAACATGCCCGTGCGTTGC 62.840 57.895 0.00 0.00 41.78 4.17
725 1125 1.729131 GAAACATGCCCGTGCGTTG 60.729 57.895 0.00 0.00 41.78 4.10
726 1126 2.642700 GAAACATGCCCGTGCGTT 59.357 55.556 0.00 0.00 41.78 4.84
727 1127 2.457743 TAGGAAACATGCCCGTGCGT 62.458 55.000 0.00 0.00 41.78 5.24
728 1128 1.705337 CTAGGAAACATGCCCGTGCG 61.705 60.000 0.00 0.00 41.78 5.34
729 1129 0.676782 ACTAGGAAACATGCCCGTGC 60.677 55.000 0.00 0.00 38.26 5.34
730 1130 1.821216 AACTAGGAAACATGCCCGTG 58.179 50.000 0.00 0.00 0.00 4.94
731 1131 2.570302 AGTAACTAGGAAACATGCCCGT 59.430 45.455 0.00 0.00 0.00 5.28
732 1132 2.936498 CAGTAACTAGGAAACATGCCCG 59.064 50.000 0.00 0.00 0.00 6.13
733 1133 2.683362 GCAGTAACTAGGAAACATGCCC 59.317 50.000 0.00 0.00 0.00 5.36
734 1134 2.351726 CGCAGTAACTAGGAAACATGCC 59.648 50.000 0.00 0.00 0.00 4.40
735 1135 3.000727 ACGCAGTAACTAGGAAACATGC 58.999 45.455 0.00 0.00 41.94 4.06
769 1169 7.315066 AGGGAATGTAAATTCATTGTGGTTT 57.685 32.000 7.92 0.00 38.03 3.27
784 1184 4.710865 TCGGTACAACATGTAGGGAATGTA 59.289 41.667 0.00 0.00 37.27 2.29
841 1241 3.871574 GCTTTATCGCGGCGGCAA 61.872 61.111 23.46 13.56 39.92 4.52
860 1260 1.971357 ACTTGAGTCAGGTGTCCGATT 59.029 47.619 7.16 0.00 0.00 3.34
897 1297 1.335132 TTGTAGGGGAGCCATCGGTC 61.335 60.000 0.00 0.00 35.68 4.79
1039 1446 1.341156 GCTAGAGCCAGGGTGGACAT 61.341 60.000 0.00 0.00 40.96 3.06
1069 1476 3.519930 GACGGCGAGGAGGAGGAC 61.520 72.222 16.62 0.00 0.00 3.85
1522 1929 2.571528 CGCTCAGCACGTATCACTC 58.428 57.895 0.00 0.00 0.00 3.51
1553 1960 2.891580 GGACCAGTACACAGACAGAGAA 59.108 50.000 0.00 0.00 0.00 2.87
1554 1961 2.108425 AGGACCAGTACACAGACAGAGA 59.892 50.000 0.00 0.00 0.00 3.10
1555 1962 2.520069 AGGACCAGTACACAGACAGAG 58.480 52.381 0.00 0.00 0.00 3.35
1557 1964 3.753294 AAAGGACCAGTACACAGACAG 57.247 47.619 0.00 0.00 0.00 3.51
1589 1996 7.738609 CACATTATACGTCAACAGTTACAACAC 59.261 37.037 0.00 0.00 0.00 3.32
1590 1997 7.569774 GCACATTATACGTCAACAGTTACAACA 60.570 37.037 0.00 0.00 0.00 3.33
1591 1998 6.735063 GCACATTATACGTCAACAGTTACAAC 59.265 38.462 0.00 0.00 0.00 3.32
1593 2000 6.090223 CAGCACATTATACGTCAACAGTTACA 59.910 38.462 0.00 0.00 0.00 2.41
1594 2001 6.466812 CAGCACATTATACGTCAACAGTTAC 58.533 40.000 0.00 0.00 0.00 2.50
1595 2002 5.062934 GCAGCACATTATACGTCAACAGTTA 59.937 40.000 0.00 0.00 0.00 2.24
1596 2003 4.142902 GCAGCACATTATACGTCAACAGTT 60.143 41.667 0.00 0.00 0.00 3.16
1597 2004 3.370978 GCAGCACATTATACGTCAACAGT 59.629 43.478 0.00 0.00 0.00 3.55
1598 2005 3.242413 GGCAGCACATTATACGTCAACAG 60.242 47.826 0.00 0.00 0.00 3.16
1602 2009 2.979814 AGGCAGCACATTATACGTCA 57.020 45.000 0.00 0.00 0.00 4.35
1604 2011 3.637229 AGACTAGGCAGCACATTATACGT 59.363 43.478 0.00 0.00 0.00 3.57
1605 2012 4.022762 AGAGACTAGGCAGCACATTATACG 60.023 45.833 0.00 0.00 0.00 3.06
1606 2013 5.461032 AGAGACTAGGCAGCACATTATAC 57.539 43.478 0.00 0.00 0.00 1.47
1607 2014 6.098266 TGAAAGAGACTAGGCAGCACATTATA 59.902 38.462 0.00 0.00 0.00 0.98
1608 2015 5.104776 TGAAAGAGACTAGGCAGCACATTAT 60.105 40.000 0.00 0.00 0.00 1.28
1612 2019 1.970640 TGAAAGAGACTAGGCAGCACA 59.029 47.619 0.00 0.00 0.00 4.57
1613 2020 2.751166 TGAAAGAGACTAGGCAGCAC 57.249 50.000 0.00 0.00 0.00 4.40
1614 2021 2.833943 TGATGAAAGAGACTAGGCAGCA 59.166 45.455 0.00 0.00 0.00 4.41
1615 2022 3.131933 TCTGATGAAAGAGACTAGGCAGC 59.868 47.826 0.00 0.00 0.00 5.25
1616 2023 4.998671 TCTGATGAAAGAGACTAGGCAG 57.001 45.455 0.00 0.00 0.00 4.85
1617 2024 5.396101 CCAATCTGATGAAAGAGACTAGGCA 60.396 44.000 0.00 0.00 0.00 4.75
1618 2025 5.055812 CCAATCTGATGAAAGAGACTAGGC 58.944 45.833 0.00 0.00 0.00 3.93
1619 2026 6.098124 AGACCAATCTGATGAAAGAGACTAGG 59.902 42.308 0.00 0.00 32.29 3.02
1620 2027 7.111247 AGACCAATCTGATGAAAGAGACTAG 57.889 40.000 0.00 0.00 32.29 2.57
1621 2028 7.487822 AAGACCAATCTGATGAAAGAGACTA 57.512 36.000 0.00 0.00 34.48 2.59
1622 2029 6.371595 AAGACCAATCTGATGAAAGAGACT 57.628 37.500 0.00 0.00 34.48 3.24
1623 2030 7.303998 CAAAAGACCAATCTGATGAAAGAGAC 58.696 38.462 0.00 0.00 34.48 3.36
1624 2031 6.432162 CCAAAAGACCAATCTGATGAAAGAGA 59.568 38.462 0.00 0.00 34.48 3.10
1625 2032 6.208204 ACCAAAAGACCAATCTGATGAAAGAG 59.792 38.462 0.00 0.00 34.48 2.85
1626 2033 6.070656 ACCAAAAGACCAATCTGATGAAAGA 58.929 36.000 0.00 0.00 34.48 2.52
1627 2034 6.336842 ACCAAAAGACCAATCTGATGAAAG 57.663 37.500 0.00 0.00 34.48 2.62
1628 2035 6.514947 CAACCAAAAGACCAATCTGATGAAA 58.485 36.000 0.00 0.00 34.48 2.69
1629 2036 5.509501 GCAACCAAAAGACCAATCTGATGAA 60.510 40.000 0.00 0.00 34.48 2.57
1630 2037 4.022068 GCAACCAAAAGACCAATCTGATGA 60.022 41.667 0.00 0.00 34.48 2.92
1631 2038 4.240096 GCAACCAAAAGACCAATCTGATG 58.760 43.478 0.00 0.00 34.48 3.07
1632 2039 3.896888 TGCAACCAAAAGACCAATCTGAT 59.103 39.130 0.00 0.00 34.48 2.90
1633 2040 3.295093 TGCAACCAAAAGACCAATCTGA 58.705 40.909 0.00 0.00 34.48 3.27
1634 2041 3.731652 TGCAACCAAAAGACCAATCTG 57.268 42.857 0.00 0.00 34.48 2.90
1635 2042 4.961438 AATGCAACCAAAAGACCAATCT 57.039 36.364 0.00 0.00 36.42 2.40
1636 2043 4.627035 GCTAATGCAACCAAAAGACCAATC 59.373 41.667 0.00 0.00 39.41 2.67
1637 2044 4.284234 AGCTAATGCAACCAAAAGACCAAT 59.716 37.500 0.00 0.00 42.74 3.16
1638 2045 3.640967 AGCTAATGCAACCAAAAGACCAA 59.359 39.130 0.00 0.00 42.74 3.67
1639 2046 3.230134 AGCTAATGCAACCAAAAGACCA 58.770 40.909 0.00 0.00 42.74 4.02
1640 2047 3.942130 AGCTAATGCAACCAAAAGACC 57.058 42.857 0.00 0.00 42.74 3.85
1641 2048 5.674820 GCTCTAGCTAATGCAACCAAAAGAC 60.675 44.000 11.39 0.00 42.74 3.01
1642 2049 4.396166 GCTCTAGCTAATGCAACCAAAAGA 59.604 41.667 11.39 0.00 42.74 2.52
1643 2050 4.156556 TGCTCTAGCTAATGCAACCAAAAG 59.843 41.667 15.29 0.00 42.74 2.27
1644 2051 4.078537 TGCTCTAGCTAATGCAACCAAAA 58.921 39.130 15.29 0.00 42.74 2.44
1645 2052 3.684908 TGCTCTAGCTAATGCAACCAAA 58.315 40.909 15.29 0.00 42.74 3.28
1646 2053 3.348647 TGCTCTAGCTAATGCAACCAA 57.651 42.857 15.29 0.00 42.74 3.67
1647 2054 3.208594 CATGCTCTAGCTAATGCAACCA 58.791 45.455 19.70 2.30 42.74 3.67
1648 2055 2.031333 GCATGCTCTAGCTAATGCAACC 60.031 50.000 18.86 11.73 44.74 3.77
1649 2056 3.265070 GCATGCTCTAGCTAATGCAAC 57.735 47.619 18.86 12.85 44.74 4.17
1652 2059 2.492012 AGTGCATGCTCTAGCTAATGC 58.508 47.619 20.22 17.52 45.25 3.56
1653 2060 4.378774 AGAAGTGCATGCTCTAGCTAATG 58.621 43.478 21.70 0.00 42.66 1.90
1654 2061 4.686191 AGAAGTGCATGCTCTAGCTAAT 57.314 40.909 21.70 5.92 42.66 1.73
1655 2062 4.402474 TGTAGAAGTGCATGCTCTAGCTAA 59.598 41.667 21.70 13.22 42.66 3.09
1656 2063 3.954258 TGTAGAAGTGCATGCTCTAGCTA 59.046 43.478 21.70 20.57 42.66 3.32
1657 2064 2.762887 TGTAGAAGTGCATGCTCTAGCT 59.237 45.455 21.70 21.45 42.66 3.32
1658 2065 3.170791 TGTAGAAGTGCATGCTCTAGC 57.829 47.619 21.70 16.29 42.50 3.42
1659 2066 5.114780 ACAATGTAGAAGTGCATGCTCTAG 58.885 41.667 21.70 9.54 0.00 2.43
1660 2067 5.089970 ACAATGTAGAAGTGCATGCTCTA 57.910 39.130 21.70 15.62 0.00 2.43
1661 2068 3.947868 ACAATGTAGAAGTGCATGCTCT 58.052 40.909 20.33 18.23 0.00 4.09
1662 2069 5.525012 TGATACAATGTAGAAGTGCATGCTC 59.475 40.000 20.33 15.94 0.00 4.26
1663 2070 5.430886 TGATACAATGTAGAAGTGCATGCT 58.569 37.500 20.33 0.00 0.00 3.79
1664 2071 5.525012 TCTGATACAATGTAGAAGTGCATGC 59.475 40.000 11.82 11.82 0.00 4.06
1665 2072 6.292757 GCTCTGATACAATGTAGAAGTGCATG 60.293 42.308 18.82 0.00 0.00 4.06
1666 2073 5.757320 GCTCTGATACAATGTAGAAGTGCAT 59.243 40.000 18.82 0.00 0.00 3.96
1667 2074 5.111989 GCTCTGATACAATGTAGAAGTGCA 58.888 41.667 18.82 0.00 0.00 4.57
1668 2075 4.509600 GGCTCTGATACAATGTAGAAGTGC 59.490 45.833 16.94 16.94 0.00 4.40
1669 2076 5.664457 TGGCTCTGATACAATGTAGAAGTG 58.336 41.667 0.00 1.81 0.00 3.16
1670 2077 5.939764 TGGCTCTGATACAATGTAGAAGT 57.060 39.130 0.00 0.00 0.00 3.01
1671 2078 6.577103 TCTTGGCTCTGATACAATGTAGAAG 58.423 40.000 0.00 0.00 0.00 2.85
1672 2079 6.544928 TCTTGGCTCTGATACAATGTAGAA 57.455 37.500 0.00 0.00 0.00 2.10
1673 2080 6.098838 ACATCTTGGCTCTGATACAATGTAGA 59.901 38.462 0.00 0.00 0.00 2.59
1674 2081 6.286758 ACATCTTGGCTCTGATACAATGTAG 58.713 40.000 0.00 0.00 0.00 2.74
1675 2082 6.098838 AGACATCTTGGCTCTGATACAATGTA 59.901 38.462 0.00 0.00 18.29 2.29
1676 2083 5.104610 AGACATCTTGGCTCTGATACAATGT 60.105 40.000 0.00 0.00 18.29 2.71
1677 2084 5.366460 AGACATCTTGGCTCTGATACAATG 58.634 41.667 0.00 0.00 18.29 2.82
1678 2085 5.627182 AGACATCTTGGCTCTGATACAAT 57.373 39.130 0.00 0.00 18.29 2.71
1679 2086 5.426689 AAGACATCTTGGCTCTGATACAA 57.573 39.130 0.00 0.00 31.94 2.41
1680 2087 5.181009 CAAAGACATCTTGGCTCTGATACA 58.819 41.667 0.00 0.00 31.94 2.29
1681 2088 4.034975 GCAAAGACATCTTGGCTCTGATAC 59.965 45.833 12.90 0.00 46.72 2.24
1682 2089 4.194640 GCAAAGACATCTTGGCTCTGATA 58.805 43.478 12.90 0.00 46.72 2.15
1683 2090 3.015327 GCAAAGACATCTTGGCTCTGAT 58.985 45.455 12.90 0.00 46.72 2.90
1684 2091 2.430465 GCAAAGACATCTTGGCTCTGA 58.570 47.619 12.90 0.00 46.72 3.27
1685 2092 2.915738 GCAAAGACATCTTGGCTCTG 57.084 50.000 12.90 0.00 46.72 3.35
1690 2097 4.756642 TGTAGAAGTGCAAAGACATCTTGG 59.243 41.667 0.00 0.00 36.12 3.61
1691 2098 5.468072 ACTGTAGAAGTGCAAAGACATCTTG 59.532 40.000 0.00 0.00 37.88 3.02
1692 2099 5.615289 ACTGTAGAAGTGCAAAGACATCTT 58.385 37.500 0.00 0.00 37.88 2.40
1693 2100 5.220710 ACTGTAGAAGTGCAAAGACATCT 57.779 39.130 0.00 0.00 37.88 2.90
1694 2101 7.463383 CGATTACTGTAGAAGTGCAAAGACATC 60.463 40.741 0.00 0.00 40.26 3.06
1695 2102 6.311445 CGATTACTGTAGAAGTGCAAAGACAT 59.689 38.462 0.00 0.00 40.26 3.06
1696 2103 5.633601 CGATTACTGTAGAAGTGCAAAGACA 59.366 40.000 0.00 0.00 40.26 3.41
1697 2104 5.634020 ACGATTACTGTAGAAGTGCAAAGAC 59.366 40.000 0.00 0.00 40.26 3.01
1698 2105 5.779922 ACGATTACTGTAGAAGTGCAAAGA 58.220 37.500 0.00 0.00 40.26 2.52
1699 2106 7.576750 TTACGATTACTGTAGAAGTGCAAAG 57.423 36.000 0.00 0.00 40.26 2.77
1700 2107 7.815549 TCATTACGATTACTGTAGAAGTGCAAA 59.184 33.333 0.00 0.00 40.26 3.68
1701 2108 7.274904 GTCATTACGATTACTGTAGAAGTGCAA 59.725 37.037 0.00 0.00 40.26 4.08
1702 2109 6.750501 GTCATTACGATTACTGTAGAAGTGCA 59.249 38.462 0.00 0.00 40.26 4.57
1703 2110 6.750501 TGTCATTACGATTACTGTAGAAGTGC 59.249 38.462 0.00 0.00 40.26 4.40
1704 2111 8.746751 CATGTCATTACGATTACTGTAGAAGTG 58.253 37.037 0.00 0.00 40.26 3.16
1705 2112 8.467598 ACATGTCATTACGATTACTGTAGAAGT 58.532 33.333 0.00 0.00 43.40 3.01
1706 2113 8.858003 ACATGTCATTACGATTACTGTAGAAG 57.142 34.615 0.00 0.00 0.00 2.85
1707 2114 9.297586 GAACATGTCATTACGATTACTGTAGAA 57.702 33.333 0.00 0.00 0.00 2.10
1708 2115 7.642586 CGAACATGTCATTACGATTACTGTAGA 59.357 37.037 0.00 0.00 0.00 2.59
1709 2116 7.096599 CCGAACATGTCATTACGATTACTGTAG 60.097 40.741 0.00 0.00 0.00 2.74
1710 2117 6.693978 CCGAACATGTCATTACGATTACTGTA 59.306 38.462 0.00 0.00 0.00 2.74
1711 2118 5.518847 CCGAACATGTCATTACGATTACTGT 59.481 40.000 0.00 0.00 0.00 3.55
1712 2119 5.518847 ACCGAACATGTCATTACGATTACTG 59.481 40.000 0.00 0.00 0.00 2.74
1713 2120 5.518847 CACCGAACATGTCATTACGATTACT 59.481 40.000 0.00 0.00 0.00 2.24
1714 2121 5.724239 CACCGAACATGTCATTACGATTAC 58.276 41.667 0.00 0.00 0.00 1.89
1715 2122 4.269123 GCACCGAACATGTCATTACGATTA 59.731 41.667 0.00 0.00 0.00 1.75
1716 2123 3.063452 GCACCGAACATGTCATTACGATT 59.937 43.478 0.00 0.00 0.00 3.34
1717 2124 2.607635 GCACCGAACATGTCATTACGAT 59.392 45.455 0.00 0.00 0.00 3.73
1718 2125 1.996898 GCACCGAACATGTCATTACGA 59.003 47.619 0.00 0.00 0.00 3.43
1747 2154 0.319211 CACGGCGTTCACAGGTCTAA 60.319 55.000 11.19 0.00 0.00 2.10
1750 2157 3.712881 GCACGGCGTTCACAGGTC 61.713 66.667 11.19 0.00 0.00 3.85
1850 2295 4.223320 ACTTGTTTTACTGACAATGCCG 57.777 40.909 0.00 0.00 36.51 5.69
1852 2297 5.154222 GGCTACTTGTTTTACTGACAATGC 58.846 41.667 0.00 0.00 36.51 3.56
1905 2350 8.621286 TCAAACTAAGTTTTTCCTCTCAATCAC 58.379 33.333 0.00 0.00 33.10 3.06
1925 2370 7.277760 GGTACTCTTTGCAAATGTTTTCAAACT 59.722 33.333 13.23 0.00 39.59 2.66
2346 2950 5.549742 TTGTTGCATGGAGAGGAAAATTT 57.450 34.783 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.