Multiple sequence alignment - TraesCS1D01G205900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G205900 chr1D 100.000 4433 0 0 1 4433 291589242 291584810 0.000000e+00 8187
1 TraesCS1D01G205900 chr1D 88.904 730 59 11 822 1535 291083104 291083827 0.000000e+00 880
2 TraesCS1D01G205900 chr1D 84.346 428 34 15 3038 3434 291085271 291085696 5.380000e-104 388
3 TraesCS1D01G205900 chr1D 86.648 352 21 11 1559 1886 291083904 291084253 2.520000e-97 366
4 TraesCS1D01G205900 chr1D 79.137 556 91 15 2232 2771 291084542 291085088 1.170000e-95 361
5 TraesCS1D01G205900 chr1A 91.371 1947 117 17 1 1915 363656869 363654942 0.000000e+00 2617
6 TraesCS1D01G205900 chr1A 88.033 2064 137 53 1995 4003 363654948 363652940 0.000000e+00 2342
7 TraesCS1D01G205900 chr1A 85.259 1255 109 39 700 1902 363420009 363421239 0.000000e+00 1223
8 TraesCS1D01G205900 chr1A 83.026 542 72 8 1998 2531 363421258 363421787 1.440000e-129 473
9 TraesCS1D01G205900 chr1A 86.765 272 24 10 3173 3434 363422524 363422793 4.340000e-75 292
10 TraesCS1D01G205900 chr1A 98.230 113 2 0 3038 3150 363422231 363422343 9.730000e-47 198
11 TraesCS1D01G205900 chr1A 87.578 161 18 2 2590 2750 363421883 363422041 7.570000e-43 185
12 TraesCS1D01G205900 chr1B 90.103 1364 83 26 565 1879 392530595 392529235 0.000000e+00 1724
13 TraesCS1D01G205900 chr1B 82.586 2073 167 102 2037 4022 392529168 392527203 0.000000e+00 1650
14 TraesCS1D01G205900 chr1B 87.938 1227 88 32 694 1879 392150314 392151521 0.000000e+00 1391
15 TraesCS1D01G205900 chr1B 91.388 569 47 2 1 568 392531323 392530756 0.000000e+00 778
16 TraesCS1D01G205900 chr1B 84.390 205 32 0 2232 2436 392151755 392151959 7.520000e-48 202
17 TraesCS1D01G205900 chr1B 85.088 114 14 1 4036 4149 598846445 598846335 3.620000e-21 113
18 TraesCS1D01G205900 chr6D 85.075 335 41 4 4097 4423 337041046 337040713 2.560000e-87 333
19 TraesCS1D01G205900 chr6D 80.630 413 57 17 4036 4433 388159280 388158876 9.320000e-77 298
20 TraesCS1D01G205900 chr2A 82.064 407 58 10 4037 4433 579067784 579068185 2.560000e-87 333
21 TraesCS1D01G205900 chr4D 81.566 396 61 7 4036 4422 130456552 130456944 2.570000e-82 316
22 TraesCS1D01G205900 chr4B 81.586 391 58 10 4037 4418 456583380 456582995 1.200000e-80 311
23 TraesCS1D01G205900 chr5D 81.047 401 64 9 4036 4433 423218163 423218554 4.310000e-80 309
24 TraesCS1D01G205900 chr2B 83.728 338 38 12 4100 4425 493654381 493654049 2.000000e-78 303
25 TraesCS1D01G205900 chr2B 87.826 115 12 2 4036 4150 787534105 787534217 2.780000e-27 134
26 TraesCS1D01G205900 chr3D 80.392 408 66 8 4036 4433 120323809 120324212 9.320000e-77 298
27 TraesCS1D01G205900 chr3D 79.512 410 66 12 4036 4433 120316660 120317063 4.370000e-70 276


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G205900 chr1D 291584810 291589242 4432 True 8187.00 8187 100.000000 1 4433 1 chr1D.!!$R1 4432
1 TraesCS1D01G205900 chr1D 291083104 291085696 2592 False 498.75 880 84.758750 822 3434 4 chr1D.!!$F1 2612
2 TraesCS1D01G205900 chr1A 363652940 363656869 3929 True 2479.50 2617 89.702000 1 4003 2 chr1A.!!$R1 4002
3 TraesCS1D01G205900 chr1A 363420009 363422793 2784 False 474.20 1223 88.171600 700 3434 5 chr1A.!!$F1 2734
4 TraesCS1D01G205900 chr1B 392527203 392531323 4120 True 1384.00 1724 88.025667 1 4022 3 chr1B.!!$R2 4021
5 TraesCS1D01G205900 chr1B 392150314 392151959 1645 False 796.50 1391 86.164000 694 2436 2 chr1B.!!$F1 1742

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
453 455 0.976963 TTTTAGTCGCGCGTAACTCG 59.023 50.0 30.98 7.7 43.12 4.18 F
1090 1278 1.034838 ACGGCCTGAAAGTGCAACAA 61.035 50.0 0.00 0.0 41.43 2.83 F
2134 2421 0.040058 TGAAAGGCATCCTGGCATGT 59.960 50.0 3.43 0.0 46.46 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1399 1595 0.687354 GAAGAACAGCCAGGTCCTGA 59.313 55.0 21.23 0.00 33.03 3.86 R
2823 3220 0.534412 AGAGTCGCTGCATACAAGCT 59.466 50.0 0.00 0.00 34.99 3.74 R
4071 4731 0.031314 CCTCTGTCCGTCGATGGATG 59.969 60.0 28.48 22.49 40.91 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 6.864165 GCGTTTGTAATAAAAGAACATCCCAA 59.136 34.615 0.00 0.00 0.00 4.12
66 67 9.250624 CGTTTGTAATAAAAGAACATCCCAAAA 57.749 29.630 0.00 0.00 0.00 2.44
106 107 2.332063 ACGGAGGACATTGCCTATTG 57.668 50.000 0.43 0.00 38.73 1.90
164 165 7.307694 TCTGTCAAATATGAAACTGAATGCAC 58.692 34.615 0.00 0.00 37.30 4.57
189 190 8.939929 ACAATTATAAGCATCATTATGTCCTCG 58.060 33.333 0.00 0.00 35.38 4.63
203 205 1.819288 GTCCTCGTCACTCTGGATCAA 59.181 52.381 0.00 0.00 0.00 2.57
210 212 3.996363 CGTCACTCTGGATCAACATTTCA 59.004 43.478 0.00 0.00 0.00 2.69
215 217 3.689347 TCTGGATCAACATTTCAGGTGG 58.311 45.455 0.00 0.00 0.00 4.61
230 232 2.756760 CAGGTGGGTTGAATGATTCTGG 59.243 50.000 6.73 0.00 0.00 3.86
237 239 2.557924 GTTGAATGATTCTGGTGTGCCA 59.442 45.455 6.73 0.00 43.73 4.92
248 250 1.352017 TGGTGTGCCATCTCACTGATT 59.648 47.619 0.00 0.00 40.46 2.57
308 310 7.864307 ACGTTTCTTCCGTGTATTATATAGC 57.136 36.000 0.00 0.00 37.12 2.97
441 443 3.628032 GCCCCAGCTTAGTCATTTTAGTC 59.372 47.826 0.00 0.00 35.50 2.59
443 445 3.309954 CCCAGCTTAGTCATTTTAGTCGC 59.690 47.826 0.00 0.00 0.00 5.19
453 455 0.976963 TTTTAGTCGCGCGTAACTCG 59.023 50.000 30.98 7.70 43.12 4.18
521 523 2.452295 TGCTCTTGCTCTCTCAACAG 57.548 50.000 0.00 0.00 40.48 3.16
553 555 7.600231 AGATGCTCAAATCTCTCTCATCTAA 57.400 36.000 0.00 0.00 37.85 2.10
626 792 5.720371 TGCAAATATGTGGCTTTGTACTT 57.280 34.783 0.00 0.00 35.33 2.24
629 795 6.155827 GCAAATATGTGGCTTTGTACTTTGA 58.844 36.000 0.00 0.00 35.33 2.69
678 844 1.129811 CTTTCGCCCGCTAAATTCGTT 59.870 47.619 0.00 0.00 0.00 3.85
771 938 9.595357 GTAGCTAATCATATTTTTAAAGTCGCC 57.405 33.333 0.00 0.00 0.00 5.54
772 939 8.220755 AGCTAATCATATTTTTAAAGTCGCCA 57.779 30.769 0.00 0.00 0.00 5.69
861 1030 2.203549 GAGGGGAGAACCAGGCCAAG 62.204 65.000 5.01 0.00 42.91 3.61
908 1077 4.081972 GGACTTGATCTACTTGTCTCTGCA 60.082 45.833 0.00 0.00 0.00 4.41
937 1119 8.594550 ACAGACACAGGTTCTGTACTATAAATT 58.405 33.333 3.17 0.00 43.43 1.82
1038 1220 1.543208 CCCTGCTTGCTACTTGTGTCA 60.543 52.381 0.00 0.00 0.00 3.58
1039 1221 2.221169 CCTGCTTGCTACTTGTGTCAA 58.779 47.619 0.00 0.00 0.00 3.18
1090 1278 1.034838 ACGGCCTGAAAGTGCAACAA 61.035 50.000 0.00 0.00 41.43 2.83
1232 1420 1.572085 CTCGGCAAGGCACTGTTCTG 61.572 60.000 0.00 0.00 40.86 3.02
1392 1588 2.548057 CTGTACATCGTGTGGTTTTGCT 59.452 45.455 0.00 0.00 0.00 3.91
1399 1595 6.045955 ACATCGTGTGGTTTTGCTAAATTTT 58.954 32.000 0.00 0.00 0.00 1.82
1479 1675 3.819368 TGTGAAGAAAGATGTGCCTGAA 58.181 40.909 0.00 0.00 0.00 3.02
1538 1761 6.010219 AGTGCCAACCAAGACTAACATATTT 58.990 36.000 0.00 0.00 0.00 1.40
1539 1762 7.172342 AGTGCCAACCAAGACTAACATATTTA 58.828 34.615 0.00 0.00 0.00 1.40
1540 1763 7.834181 AGTGCCAACCAAGACTAACATATTTAT 59.166 33.333 0.00 0.00 0.00 1.40
1574 1823 5.664294 TTTCATAACAATGGAAGCATGCT 57.336 34.783 16.30 16.30 0.00 3.79
1665 1915 2.110990 CGTACACGAACACGTCTTTCA 58.889 47.619 0.00 0.00 43.02 2.69
1746 1996 8.855804 TCTTCTATATAGAAACAAGGAAGGGT 57.144 34.615 22.42 0.00 41.37 4.34
1842 2116 8.506437 CACAAAATGAAAGAGTTCTACATAGCA 58.494 33.333 0.00 0.00 34.60 3.49
1904 2178 9.880157 GCTAGCTAGATAGTAGTAGTAGAATGT 57.120 37.037 25.15 0.00 0.00 2.71
1918 2192 9.191479 AGTAGTAGAATGTATTGTACTCAAGCT 57.809 33.333 15.16 8.86 43.27 3.74
1921 2195 9.409918 AGTAGAATGTATTGTACTCAAGCTAGA 57.590 33.333 8.20 0.00 41.34 2.43
2017 2291 7.175347 ACTACTCATGATCTGACTTTTGCTA 57.825 36.000 0.00 0.00 0.00 3.49
2023 2302 7.982224 TCATGATCTGACTTTTGCTAATTCTG 58.018 34.615 0.00 0.00 0.00 3.02
2028 2308 9.852091 GATCTGACTTTTGCTAATTCTGATTTT 57.148 29.630 10.96 0.00 0.00 1.82
2031 2318 9.897744 CTGACTTTTGCTAATTCTGATTTTACA 57.102 29.630 0.00 0.00 0.00 2.41
2098 2385 2.224314 CGAGAACAAGAAAGCCTCCAAC 59.776 50.000 0.00 0.00 0.00 3.77
2116 2403 7.075741 CCTCCAACGAAAACTACATAAACTTG 58.924 38.462 0.00 0.00 0.00 3.16
2130 2417 1.260544 AACTTGAAAGGCATCCTGGC 58.739 50.000 0.00 0.00 44.10 4.85
2133 2420 1.136305 CTTGAAAGGCATCCTGGCATG 59.864 52.381 3.43 0.00 46.46 4.06
2134 2421 0.040058 TGAAAGGCATCCTGGCATGT 59.960 50.000 3.43 0.00 46.46 3.21
2135 2422 1.284491 TGAAAGGCATCCTGGCATGTA 59.716 47.619 3.43 0.00 46.46 2.29
2136 2423 1.678101 GAAAGGCATCCTGGCATGTAC 59.322 52.381 3.43 0.00 46.46 2.90
2176 2465 1.407437 GCTACCCACTTCACCATCCTG 60.407 57.143 0.00 0.00 0.00 3.86
2178 2467 0.401738 ACCCACTTCACCATCCTGTG 59.598 55.000 0.00 0.00 37.59 3.66
2179 2468 0.692476 CCCACTTCACCATCCTGTGA 59.308 55.000 0.00 0.00 43.26 3.58
2190 2479 1.027357 ATCCTGTGATTGCGATTGCC 58.973 50.000 1.50 0.00 41.78 4.52
2199 2488 2.634982 TTGCGATTGCCTGAATGTTC 57.365 45.000 1.50 0.00 41.78 3.18
2200 2489 1.532523 TGCGATTGCCTGAATGTTCA 58.467 45.000 1.50 0.00 41.78 3.18
2265 2604 2.365105 ATGGACGGGGACACGGAT 60.365 61.111 0.00 0.00 38.39 4.18
2407 2746 2.258591 GCGAGTTCAGCGTCCTCA 59.741 61.111 0.00 0.00 0.00 3.86
2526 2871 1.566018 GCCGTGTAAGCAAAGCGTCT 61.566 55.000 0.00 0.00 0.00 4.18
2560 2918 3.012518 CAGCCATTTTCGTCTCCTGATT 58.987 45.455 0.00 0.00 0.00 2.57
2570 2928 1.032794 TCTCCTGATTGATCGGTCCG 58.967 55.000 4.39 4.39 0.00 4.79
2571 2929 0.598680 CTCCTGATTGATCGGTCCGC 60.599 60.000 6.34 0.00 0.00 5.54
2577 2935 2.901051 ATTGATCGGTCCGCGTGGTC 62.901 60.000 16.01 9.60 36.30 4.02
2578 2936 4.124351 GATCGGTCCGCGTGGTCA 62.124 66.667 16.01 0.00 36.30 4.02
2581 2939 1.669049 ATCGGTCCGCGTGGTCAATA 61.669 55.000 16.01 0.00 36.30 1.90
2754 3139 2.969628 ACTCTCTCTGCCGGTAATTG 57.030 50.000 1.90 0.00 0.00 2.32
2815 3201 0.884704 TTTCGGTGGCTGAGCTGAAC 60.885 55.000 3.72 0.43 0.00 3.18
2820 3217 0.109412 GTGGCTGAGCTGAACATTGC 60.109 55.000 3.72 0.00 0.00 3.56
2851 3259 1.192793 GCAGCGACTCTATCAACGTC 58.807 55.000 0.00 0.00 0.00 4.34
2875 3283 1.079503 GGCACGATTCTGACAAGACC 58.920 55.000 0.00 0.00 29.98 3.85
2892 3300 1.874019 CCGTGCTTCCGATCGTCAG 60.874 63.158 15.09 10.23 0.00 3.51
2926 3334 1.078143 GGGGCTCCGCATATGGATC 60.078 63.158 4.56 0.00 37.41 3.36
2995 3404 4.157289 TCGTCTATACAAGTTCAGGTGGAC 59.843 45.833 0.00 0.00 0.00 4.02
3004 3418 6.779860 ACAAGTTCAGGTGGACATAAATACT 58.220 36.000 0.00 0.00 0.00 2.12
3176 3774 8.095937 ACTACTGCTTTAACTAATTGGACAAC 57.904 34.615 0.00 0.00 0.00 3.32
3187 3785 2.125269 GGACAACCCCATCGACCG 60.125 66.667 0.00 0.00 0.00 4.79
3210 3808 3.658757 TGCTTCCAATTGGTTGCTAAC 57.341 42.857 29.58 15.14 36.24 2.34
3272 3889 5.554822 ACACGTTACATCTGTGTGTTTTT 57.445 34.783 0.00 0.00 44.59 1.94
3437 4054 3.245264 CCCTCCAAGCCCTTCTAGAAAAA 60.245 47.826 6.63 0.00 0.00 1.94
3438 4055 4.570719 CCCTCCAAGCCCTTCTAGAAAAAT 60.571 45.833 6.63 0.00 0.00 1.82
3439 4056 5.340027 CCCTCCAAGCCCTTCTAGAAAAATA 60.340 44.000 6.63 0.00 0.00 1.40
3441 4058 6.388619 TCCAAGCCCTTCTAGAAAAATACT 57.611 37.500 6.63 0.00 0.00 2.12
3442 4059 6.180472 TCCAAGCCCTTCTAGAAAAATACTG 58.820 40.000 6.63 0.68 0.00 2.74
3482 4101 1.810151 GCACGTTTCCTGAATAAGGCA 59.190 47.619 0.00 0.00 46.92 4.75
3484 4103 3.625764 GCACGTTTCCTGAATAAGGCATA 59.374 43.478 0.00 0.00 46.92 3.14
3491 4110 5.651387 TCCTGAATAAGGCATAGATCGAG 57.349 43.478 0.00 0.00 46.92 4.04
3495 4118 4.832823 TGAATAAGGCATAGATCGAGGTGA 59.167 41.667 0.00 0.00 0.00 4.02
3514 4137 6.009589 AGGTGATTGATTTCATGGTTGTGTA 58.990 36.000 0.00 0.00 0.00 2.90
3515 4138 6.151648 AGGTGATTGATTTCATGGTTGTGTAG 59.848 38.462 0.00 0.00 0.00 2.74
3516 4139 6.071952 GGTGATTGATTTCATGGTTGTGTAGT 60.072 38.462 0.00 0.00 0.00 2.73
3517 4140 7.120579 GGTGATTGATTTCATGGTTGTGTAGTA 59.879 37.037 0.00 0.00 0.00 1.82
3518 4141 8.677300 GTGATTGATTTCATGGTTGTGTAGTAT 58.323 33.333 0.00 0.00 0.00 2.12
3519 4142 9.898152 TGATTGATTTCATGGTTGTGTAGTATA 57.102 29.630 0.00 0.00 0.00 1.47
3526 4149 8.756486 TTCATGGTTGTGTAGTATACTAGCTA 57.244 34.615 12.99 4.08 43.54 3.32
3550 4174 1.065600 GCTCTCTACGCTGCCTCTG 59.934 63.158 0.00 0.00 0.00 3.35
3556 4180 0.741221 CTACGCTGCCTCTGGTTTCC 60.741 60.000 0.00 0.00 0.00 3.13
3570 4194 1.745115 TTTCCAATCGAGCAGGCCG 60.745 57.895 0.00 0.00 0.00 6.13
3587 4215 2.301346 GCCGAGGATGGATTTCATTGT 58.699 47.619 0.00 0.00 35.97 2.71
3589 4217 3.499918 GCCGAGGATGGATTTCATTGTAG 59.500 47.826 0.00 0.00 35.97 2.74
3596 4224 7.121382 AGGATGGATTTCATTGTAGAACACAT 58.879 34.615 0.00 0.00 36.90 3.21
3603 4231 9.760660 GATTTCATTGTAGAACACATCTTGTAC 57.239 33.333 0.00 0.00 37.51 2.90
3606 4234 8.083462 TCATTGTAGAACACATCTTGTACAAC 57.917 34.615 3.59 0.00 40.63 3.32
3629 4257 4.686191 TGTGGATTTTGTTGCCAAGATT 57.314 36.364 0.00 0.00 32.68 2.40
3648 4276 3.604875 TTAGAGGATGGACGGTGTTTC 57.395 47.619 0.00 0.00 0.00 2.78
3661 4298 2.680805 CGGTGTTTCCTGGCTATGATGT 60.681 50.000 0.00 0.00 0.00 3.06
3662 4299 3.431626 CGGTGTTTCCTGGCTATGATGTA 60.432 47.826 0.00 0.00 0.00 2.29
3664 4301 4.141711 GGTGTTTCCTGGCTATGATGTAGA 60.142 45.833 0.00 0.00 0.00 2.59
3681 4318 3.446161 TGTAGACATCCGAAACCGAGATT 59.554 43.478 0.00 0.00 0.00 2.40
3687 4324 7.442656 AGACATCCGAAACCGAGATTAATAAT 58.557 34.615 0.00 0.00 0.00 1.28
3688 4325 8.582437 AGACATCCGAAACCGAGATTAATAATA 58.418 33.333 0.00 0.00 0.00 0.98
3689 4326 9.199982 GACATCCGAAACCGAGATTAATAATAA 57.800 33.333 0.00 0.00 0.00 1.40
3690 4327 8.985805 ACATCCGAAACCGAGATTAATAATAAC 58.014 33.333 0.00 0.00 0.00 1.89
3691 4328 7.951530 TCCGAAACCGAGATTAATAATAACC 57.048 36.000 0.00 0.00 0.00 2.85
3692 4329 6.930722 TCCGAAACCGAGATTAATAATAACCC 59.069 38.462 0.00 0.00 0.00 4.11
3693 4330 6.148315 CCGAAACCGAGATTAATAATAACCCC 59.852 42.308 0.00 0.00 0.00 4.95
3694 4331 6.707161 CGAAACCGAGATTAATAATAACCCCA 59.293 38.462 0.00 0.00 0.00 4.96
3695 4332 7.389607 CGAAACCGAGATTAATAATAACCCCAT 59.610 37.037 0.00 0.00 0.00 4.00
3696 4333 8.631480 AAACCGAGATTAATAATAACCCCATC 57.369 34.615 0.00 0.00 0.00 3.51
3697 4334 6.718294 ACCGAGATTAATAATAACCCCATCC 58.282 40.000 0.00 0.00 0.00 3.51
3701 4338 7.415004 AGATTAATAATAACCCCATCCACCA 57.585 36.000 0.00 0.00 0.00 4.17
3702 4339 8.011521 AGATTAATAATAACCCCATCCACCAT 57.988 34.615 0.00 0.00 0.00 3.55
3708 4345 0.336048 ACCCCATCCACCATTCCAAG 59.664 55.000 0.00 0.00 0.00 3.61
3709 4346 0.336048 CCCCATCCACCATTCCAAGT 59.664 55.000 0.00 0.00 0.00 3.16
3721 4358 6.389906 CACCATTCCAAGTTTCTAACCATTC 58.610 40.000 0.00 0.00 0.00 2.67
3733 4370 2.723124 AACCATTCATTCCAACGTGC 57.277 45.000 0.00 0.00 0.00 5.34
3734 4371 0.887933 ACCATTCATTCCAACGTGCC 59.112 50.000 0.00 0.00 0.00 5.01
3735 4372 0.887247 CCATTCATTCCAACGTGCCA 59.113 50.000 0.00 0.00 0.00 4.92
3736 4373 1.271934 CCATTCATTCCAACGTGCCAA 59.728 47.619 0.00 0.00 0.00 4.52
3737 4374 2.598589 CATTCATTCCAACGTGCCAAG 58.401 47.619 0.00 0.00 0.00 3.61
3738 4375 0.313672 TTCATTCCAACGTGCCAAGC 59.686 50.000 0.00 0.00 0.00 4.01
3770 4408 1.403514 GCTAGGATAGGATCGTGCAGC 60.404 57.143 0.00 0.00 39.70 5.25
3774 4412 1.495878 GATAGGATCGTGCAGCACAG 58.504 55.000 25.19 17.02 33.40 3.66
3885 4534 2.103538 CAGCATGCCATTCGCCAC 59.896 61.111 15.66 0.00 36.24 5.01
3886 4535 3.142838 AGCATGCCATTCGCCACC 61.143 61.111 15.66 0.00 36.24 4.61
3887 4536 4.211502 GCATGCCATTCGCCACCC 62.212 66.667 6.36 0.00 36.24 4.61
3904 4556 3.533105 CCGCCATGCATGCACCAT 61.533 61.111 25.37 4.03 0.00 3.55
3906 4558 1.153529 CGCCATGCATGCACCATTT 60.154 52.632 25.37 3.10 0.00 2.32
3952 4608 2.263852 CAGAGGCAAGCAGAGCGA 59.736 61.111 0.00 0.00 0.00 4.93
3957 4613 2.046892 GCAAGCAGAGCGAAGGGA 60.047 61.111 0.00 0.00 0.00 4.20
3971 4627 1.734465 GAAGGGAATTGTGCTCACGAG 59.266 52.381 0.00 0.00 0.00 4.18
3994 4654 2.095768 ACGATGCCATGTGAAACGAAAG 60.096 45.455 0.00 0.00 42.39 2.62
3999 4659 3.243367 TGCCATGTGAAACGAAAGGAAAG 60.243 43.478 0.00 0.00 42.39 2.62
4009 4669 6.490040 TGAAACGAAAGGAAAGGAATTCTGAT 59.510 34.615 5.23 0.00 38.18 2.90
4010 4670 6.901081 AACGAAAGGAAAGGAATTCTGATT 57.099 33.333 5.23 0.00 38.18 2.57
4014 4674 6.803807 CGAAAGGAAAGGAATTCTGATTTGAC 59.196 38.462 5.23 1.39 38.18 3.18
4017 4677 7.846101 AGGAAAGGAATTCTGATTTGACTTT 57.154 32.000 5.23 3.82 38.18 2.66
4022 4682 5.840693 AGGAATTCTGATTTGACTTTTGGGT 59.159 36.000 5.23 0.00 0.00 4.51
4023 4683 6.015095 AGGAATTCTGATTTGACTTTTGGGTC 60.015 38.462 5.23 0.00 36.81 4.46
4024 4684 5.728637 ATTCTGATTTGACTTTTGGGTCC 57.271 39.130 0.00 0.00 35.54 4.46
4025 4685 4.177537 TCTGATTTGACTTTTGGGTCCA 57.822 40.909 0.00 0.00 35.54 4.02
4026 4686 4.144297 TCTGATTTGACTTTTGGGTCCAG 58.856 43.478 0.00 0.00 35.54 3.86
4027 4687 2.627699 TGATTTGACTTTTGGGTCCAGC 59.372 45.455 0.00 0.00 35.54 4.85
4028 4688 2.452600 TTTGACTTTTGGGTCCAGCT 57.547 45.000 0.00 0.00 35.54 4.24
4029 4689 1.691196 TTGACTTTTGGGTCCAGCTG 58.309 50.000 6.78 6.78 35.54 4.24
4030 4690 0.550914 TGACTTTTGGGTCCAGCTGT 59.449 50.000 13.81 0.00 35.54 4.40
4031 4691 1.064017 TGACTTTTGGGTCCAGCTGTT 60.064 47.619 13.81 0.00 35.54 3.16
4032 4692 2.173782 TGACTTTTGGGTCCAGCTGTTA 59.826 45.455 13.81 0.00 35.54 2.41
4033 4693 3.181434 TGACTTTTGGGTCCAGCTGTTAT 60.181 43.478 13.81 0.00 35.54 1.89
4034 4694 3.157087 ACTTTTGGGTCCAGCTGTTATG 58.843 45.455 13.81 0.00 0.00 1.90
4035 4695 2.214376 TTTGGGTCCAGCTGTTATGG 57.786 50.000 13.81 0.00 39.33 2.74
4036 4696 0.331278 TTGGGTCCAGCTGTTATGGG 59.669 55.000 13.81 0.00 38.44 4.00
4037 4697 1.227383 GGGTCCAGCTGTTATGGGG 59.773 63.158 13.81 0.00 38.44 4.96
4038 4698 1.453928 GGTCCAGCTGTTATGGGGC 60.454 63.158 13.81 0.00 38.44 5.80
4039 4699 1.302949 GTCCAGCTGTTATGGGGCA 59.697 57.895 13.81 0.00 38.44 5.36
4040 4700 0.106519 GTCCAGCTGTTATGGGGCAT 60.107 55.000 13.81 0.00 38.44 4.40
4041 4701 0.183492 TCCAGCTGTTATGGGGCATC 59.817 55.000 13.81 0.00 38.44 3.91
4042 4702 0.184451 CCAGCTGTTATGGGGCATCT 59.816 55.000 13.81 0.00 33.94 2.90
4043 4703 1.602311 CAGCTGTTATGGGGCATCTC 58.398 55.000 5.25 0.00 0.00 2.75
4044 4704 0.475906 AGCTGTTATGGGGCATCTCC 59.524 55.000 0.00 0.00 0.00 3.71
4045 4705 0.183492 GCTGTTATGGGGCATCTCCA 59.817 55.000 0.00 0.00 38.82 3.86
4046 4706 1.410083 GCTGTTATGGGGCATCTCCAA 60.410 52.381 0.00 0.00 37.87 3.53
4047 4707 2.301346 CTGTTATGGGGCATCTCCAAC 58.699 52.381 0.00 0.00 37.87 3.77
4048 4708 1.308998 GTTATGGGGCATCTCCAACG 58.691 55.000 0.00 0.00 37.87 4.10
4049 4709 0.182537 TTATGGGGCATCTCCAACGG 59.817 55.000 0.00 0.00 37.87 4.44
4050 4710 2.337879 TATGGGGCATCTCCAACGGC 62.338 60.000 0.00 0.00 37.87 5.68
4051 4711 4.424711 GGGGCATCTCCAACGGCA 62.425 66.667 0.00 0.00 36.21 5.69
4052 4712 2.361104 GGGCATCTCCAACGGCAA 60.361 61.111 0.00 0.00 36.21 4.52
4053 4713 2.700773 GGGCATCTCCAACGGCAAC 61.701 63.158 0.00 0.00 36.21 4.17
4054 4714 2.700773 GGCATCTCCAACGGCAACC 61.701 63.158 0.00 0.00 34.01 3.77
4055 4715 2.700773 GCATCTCCAACGGCAACCC 61.701 63.158 0.00 0.00 0.00 4.11
4067 4727 2.933495 GGCAACCCGTAAATTTCCTC 57.067 50.000 0.00 0.00 0.00 3.71
4068 4728 2.164338 GGCAACCCGTAAATTTCCTCA 58.836 47.619 0.00 0.00 0.00 3.86
4069 4729 2.094906 GGCAACCCGTAAATTTCCTCAC 60.095 50.000 0.00 0.00 0.00 3.51
4070 4730 2.413634 GCAACCCGTAAATTTCCTCACG 60.414 50.000 0.00 0.00 0.00 4.35
4071 4731 1.445871 ACCCGTAAATTTCCTCACGC 58.554 50.000 5.83 0.00 33.19 5.34
4072 4732 1.270947 ACCCGTAAATTTCCTCACGCA 60.271 47.619 5.83 0.00 33.19 5.24
4073 4733 2.014128 CCCGTAAATTTCCTCACGCAT 58.986 47.619 5.83 0.00 33.19 4.73
4074 4734 2.031683 CCCGTAAATTTCCTCACGCATC 59.968 50.000 5.83 0.00 33.19 3.91
4075 4735 2.031683 CCGTAAATTTCCTCACGCATCC 59.968 50.000 5.83 0.00 33.19 3.51
4076 4736 2.675844 CGTAAATTTCCTCACGCATCCA 59.324 45.455 0.00 0.00 0.00 3.41
4077 4737 3.312421 CGTAAATTTCCTCACGCATCCAT 59.688 43.478 0.00 0.00 0.00 3.41
4078 4738 4.552767 CGTAAATTTCCTCACGCATCCATC 60.553 45.833 0.00 0.00 0.00 3.51
4079 4739 1.586422 ATTTCCTCACGCATCCATCG 58.414 50.000 0.00 0.00 0.00 3.84
4080 4740 0.534873 TTTCCTCACGCATCCATCGA 59.465 50.000 0.00 0.00 0.00 3.59
4081 4741 0.179111 TTCCTCACGCATCCATCGAC 60.179 55.000 0.00 0.00 0.00 4.20
4082 4742 1.946156 CCTCACGCATCCATCGACG 60.946 63.158 0.00 0.00 0.00 5.12
4083 4743 1.946156 CTCACGCATCCATCGACGG 60.946 63.158 0.00 0.00 0.00 4.79
4084 4744 2.104132 CACGCATCCATCGACGGA 59.896 61.111 1.11 1.11 40.07 4.69
4085 4745 2.104331 ACGCATCCATCGACGGAC 59.896 61.111 0.39 0.00 38.07 4.79
4086 4746 2.104132 CGCATCCATCGACGGACA 59.896 61.111 0.39 0.00 38.07 4.02
4087 4747 1.946156 CGCATCCATCGACGGACAG 60.946 63.158 0.39 0.00 38.07 3.51
4088 4748 1.437573 GCATCCATCGACGGACAGA 59.562 57.895 0.39 0.00 38.07 3.41
4089 4749 0.596083 GCATCCATCGACGGACAGAG 60.596 60.000 0.39 0.00 38.07 3.35
4090 4750 0.031314 CATCCATCGACGGACAGAGG 59.969 60.000 0.39 0.00 38.07 3.69
4091 4751 0.106669 ATCCATCGACGGACAGAGGA 60.107 55.000 0.39 0.00 38.07 3.71
4092 4752 0.748367 TCCATCGACGGACAGAGGAG 60.748 60.000 0.00 0.00 0.00 3.69
4093 4753 0.748367 CCATCGACGGACAGAGGAGA 60.748 60.000 0.00 0.00 0.00 3.71
4094 4754 1.095600 CATCGACGGACAGAGGAGAA 58.904 55.000 0.00 0.00 0.00 2.87
4095 4755 1.678627 CATCGACGGACAGAGGAGAAT 59.321 52.381 0.00 0.00 0.00 2.40
4096 4756 1.380524 TCGACGGACAGAGGAGAATC 58.619 55.000 0.00 0.00 0.00 2.52
4097 4757 1.095600 CGACGGACAGAGGAGAATCA 58.904 55.000 0.00 0.00 36.25 2.57
4098 4758 1.064803 CGACGGACAGAGGAGAATCAG 59.935 57.143 0.00 0.00 36.25 2.90
4099 4759 2.096248 GACGGACAGAGGAGAATCAGT 58.904 52.381 0.00 0.00 36.25 3.41
4100 4760 2.096248 ACGGACAGAGGAGAATCAGTC 58.904 52.381 0.00 0.00 36.25 3.51
4101 4761 1.407258 CGGACAGAGGAGAATCAGTCC 59.593 57.143 7.92 7.92 46.81 3.85
4103 4763 3.518634 GACAGAGGAGAATCAGTCCAC 57.481 52.381 0.00 0.00 36.43 4.02
4104 4764 1.821753 ACAGAGGAGAATCAGTCCACG 59.178 52.381 0.00 0.00 36.43 4.94
4105 4765 1.135915 CAGAGGAGAATCAGTCCACGG 59.864 57.143 0.00 0.00 36.43 4.94
4106 4766 1.006043 AGAGGAGAATCAGTCCACGGA 59.994 52.381 0.00 0.00 36.43 4.69
4107 4767 1.135333 GAGGAGAATCAGTCCACGGAC 59.865 57.143 8.23 8.23 44.86 4.79
4108 4768 0.895530 GGAGAATCAGTCCACGGACA 59.104 55.000 18.21 0.00 46.76 4.02
4109 4769 1.404315 GGAGAATCAGTCCACGGACAC 60.404 57.143 18.21 4.57 46.76 3.67
4110 4770 0.243907 AGAATCAGTCCACGGACACG 59.756 55.000 18.21 8.88 46.76 4.49
4111 4771 0.736325 GAATCAGTCCACGGACACGG 60.736 60.000 18.21 7.48 46.76 4.94
4112 4772 1.183030 AATCAGTCCACGGACACGGA 61.183 55.000 18.21 12.22 46.76 4.69
4113 4773 0.970937 ATCAGTCCACGGACACGGAT 60.971 55.000 18.21 13.76 46.76 4.18
4114 4774 1.446099 CAGTCCACGGACACGGATG 60.446 63.158 18.21 3.71 46.76 3.51
4115 4775 2.813908 GTCCACGGACACGGATGC 60.814 66.667 11.43 0.00 46.48 3.91
4116 4776 4.429212 TCCACGGACACGGATGCG 62.429 66.667 4.58 4.58 46.48 4.73
4117 4777 4.429212 CCACGGACACGGATGCGA 62.429 66.667 15.49 0.00 46.48 5.10
4118 4778 2.880879 CACGGACACGGATGCGAG 60.881 66.667 15.49 8.35 46.48 5.03
4119 4779 3.060000 ACGGACACGGATGCGAGA 61.060 61.111 15.49 0.00 46.48 4.04
4120 4780 2.278206 CGGACACGGATGCGAGAG 60.278 66.667 15.49 5.24 36.18 3.20
4121 4781 2.105128 GGACACGGATGCGAGAGG 59.895 66.667 15.49 2.12 0.00 3.69
4122 4782 2.415608 GGACACGGATGCGAGAGGA 61.416 63.158 15.49 0.00 0.00 3.71
4123 4783 1.226717 GACACGGATGCGAGAGGAC 60.227 63.158 15.49 0.00 0.00 3.85
4124 4784 2.278206 CACGGATGCGAGAGGACG 60.278 66.667 15.49 0.00 0.00 4.79
4125 4785 2.750637 ACGGATGCGAGAGGACGT 60.751 61.111 15.49 0.00 35.59 4.34
4126 4786 2.024871 CGGATGCGAGAGGACGTC 59.975 66.667 7.13 7.13 35.59 4.34
4127 4787 2.761195 CGGATGCGAGAGGACGTCA 61.761 63.158 18.91 0.00 35.59 4.35
4128 4788 1.736586 GGATGCGAGAGGACGTCAT 59.263 57.895 18.91 11.04 34.70 3.06
4129 4789 0.103208 GGATGCGAGAGGACGTCATT 59.897 55.000 18.91 4.51 33.24 2.57
4130 4790 1.482278 GATGCGAGAGGACGTCATTC 58.518 55.000 18.91 14.04 33.24 2.67
4131 4791 0.817654 ATGCGAGAGGACGTCATTCA 59.182 50.000 18.91 7.77 35.59 2.57
4132 4792 0.601057 TGCGAGAGGACGTCATTCAA 59.399 50.000 18.91 0.35 35.59 2.69
4133 4793 0.992802 GCGAGAGGACGTCATTCAAC 59.007 55.000 18.91 11.00 35.59 3.18
4134 4794 1.668919 GCGAGAGGACGTCATTCAACA 60.669 52.381 18.91 0.00 35.59 3.33
4135 4795 1.986378 CGAGAGGACGTCATTCAACAC 59.014 52.381 18.91 0.00 0.00 3.32
4136 4796 2.351835 CGAGAGGACGTCATTCAACACT 60.352 50.000 18.91 1.81 0.00 3.55
4137 4797 3.119955 CGAGAGGACGTCATTCAACACTA 60.120 47.826 18.91 0.00 0.00 2.74
4138 4798 4.416620 GAGAGGACGTCATTCAACACTAG 58.583 47.826 18.91 0.00 0.00 2.57
4139 4799 2.924290 GAGGACGTCATTCAACACTAGC 59.076 50.000 18.91 0.00 0.00 3.42
4140 4800 2.000447 GGACGTCATTCAACACTAGCC 59.000 52.381 18.91 0.00 0.00 3.93
4141 4801 1.654105 GACGTCATTCAACACTAGCCG 59.346 52.381 11.55 0.00 0.00 5.52
4142 4802 0.370273 CGTCATTCAACACTAGCCGC 59.630 55.000 0.00 0.00 0.00 6.53
4143 4803 1.438651 GTCATTCAACACTAGCCGCA 58.561 50.000 0.00 0.00 0.00 5.69
4144 4804 2.009774 GTCATTCAACACTAGCCGCAT 58.990 47.619 0.00 0.00 0.00 4.73
4145 4805 3.194861 GTCATTCAACACTAGCCGCATA 58.805 45.455 0.00 0.00 0.00 3.14
4146 4806 3.001330 GTCATTCAACACTAGCCGCATAC 59.999 47.826 0.00 0.00 0.00 2.39
4147 4807 2.753055 TTCAACACTAGCCGCATACA 57.247 45.000 0.00 0.00 0.00 2.29
4148 4808 2.979814 TCAACACTAGCCGCATACAT 57.020 45.000 0.00 0.00 0.00 2.29
4149 4809 3.260475 TCAACACTAGCCGCATACATT 57.740 42.857 0.00 0.00 0.00 2.71
4150 4810 3.605634 TCAACACTAGCCGCATACATTT 58.394 40.909 0.00 0.00 0.00 2.32
4151 4811 4.006989 TCAACACTAGCCGCATACATTTT 58.993 39.130 0.00 0.00 0.00 1.82
4152 4812 4.097714 CAACACTAGCCGCATACATTTTG 58.902 43.478 0.00 0.00 0.00 2.44
4153 4813 3.605634 ACACTAGCCGCATACATTTTGA 58.394 40.909 0.00 0.00 0.00 2.69
4154 4814 3.374058 ACACTAGCCGCATACATTTTGAC 59.626 43.478 0.00 0.00 0.00 3.18
4155 4815 3.373748 CACTAGCCGCATACATTTTGACA 59.626 43.478 0.00 0.00 0.00 3.58
4156 4816 4.006989 ACTAGCCGCATACATTTTGACAA 58.993 39.130 0.00 0.00 0.00 3.18
4157 4817 3.216147 AGCCGCATACATTTTGACAAC 57.784 42.857 0.00 0.00 0.00 3.32
4158 4818 2.556189 AGCCGCATACATTTTGACAACA 59.444 40.909 0.00 0.00 0.00 3.33
4159 4819 3.005261 AGCCGCATACATTTTGACAACAA 59.995 39.130 0.00 0.00 0.00 2.83
4160 4820 3.121113 GCCGCATACATTTTGACAACAAC 59.879 43.478 0.00 0.00 35.63 3.32
4161 4821 4.545610 CCGCATACATTTTGACAACAACT 58.454 39.130 0.00 0.00 35.63 3.16
4162 4822 4.616802 CCGCATACATTTTGACAACAACTC 59.383 41.667 0.00 0.00 35.63 3.01
4163 4823 4.318071 CGCATACATTTTGACAACAACTCG 59.682 41.667 0.00 0.00 35.63 4.18
4164 4824 5.448438 GCATACATTTTGACAACAACTCGA 58.552 37.500 0.00 0.00 35.63 4.04
4165 4825 5.912396 GCATACATTTTGACAACAACTCGAA 59.088 36.000 0.00 0.00 35.63 3.71
4166 4826 6.129457 GCATACATTTTGACAACAACTCGAAC 60.129 38.462 0.00 0.00 35.63 3.95
4167 4827 4.668289 ACATTTTGACAACAACTCGAACC 58.332 39.130 0.00 0.00 35.63 3.62
4168 4828 3.392769 TTTTGACAACAACTCGAACCG 57.607 42.857 0.00 0.00 35.63 4.44
4169 4829 2.296831 TTGACAACAACTCGAACCGA 57.703 45.000 0.00 0.00 0.00 4.69
4170 4830 2.296831 TGACAACAACTCGAACCGAA 57.703 45.000 0.00 0.00 34.74 4.30
4171 4831 1.928503 TGACAACAACTCGAACCGAAC 59.071 47.619 0.00 0.00 34.74 3.95
4172 4832 0.925466 ACAACAACTCGAACCGAACG 59.075 50.000 0.00 0.00 34.74 3.95
4173 4833 1.202203 CAACAACTCGAACCGAACGA 58.798 50.000 0.00 0.00 34.74 3.85
4174 4834 1.589320 CAACAACTCGAACCGAACGAA 59.411 47.619 0.00 0.00 39.23 3.85
4175 4835 1.925229 ACAACTCGAACCGAACGAAA 58.075 45.000 0.00 0.00 39.23 3.46
4176 4836 2.476821 ACAACTCGAACCGAACGAAAT 58.523 42.857 0.00 0.00 39.23 2.17
4177 4837 2.867975 ACAACTCGAACCGAACGAAATT 59.132 40.909 0.00 0.00 39.23 1.82
4178 4838 3.060070 ACAACTCGAACCGAACGAAATTC 60.060 43.478 0.00 0.00 39.23 2.17
4189 4849 3.413558 GAACGAAATTCGATGAAACCGG 58.586 45.455 22.92 0.00 43.74 5.28
4190 4850 2.690786 ACGAAATTCGATGAAACCGGA 58.309 42.857 22.92 0.00 43.74 5.14
4191 4851 2.414138 ACGAAATTCGATGAAACCGGAC 59.586 45.455 22.92 0.00 43.74 4.79
4192 4852 2.534150 CGAAATTCGATGAAACCGGACG 60.534 50.000 9.46 4.02 43.74 4.79
4193 4853 2.373540 AATTCGATGAAACCGGACGA 57.626 45.000 9.46 6.49 0.00 4.20
4194 4854 2.373540 ATTCGATGAAACCGGACGAA 57.626 45.000 9.46 14.89 44.56 3.85
4195 4855 2.151881 TTCGATGAAACCGGACGAAA 57.848 45.000 9.46 0.00 39.39 3.46
4196 4856 2.373540 TCGATGAAACCGGACGAAAT 57.626 45.000 9.46 0.00 0.00 2.17
4197 4857 2.690786 TCGATGAAACCGGACGAAATT 58.309 42.857 9.46 0.00 0.00 1.82
4198 4858 3.068560 TCGATGAAACCGGACGAAATTT 58.931 40.909 9.46 0.00 0.00 1.82
4199 4859 3.120477 TCGATGAAACCGGACGAAATTTG 60.120 43.478 9.46 0.00 0.00 2.32
4200 4860 3.120477 CGATGAAACCGGACGAAATTTGA 60.120 43.478 9.46 0.00 0.00 2.69
4201 4861 4.436852 CGATGAAACCGGACGAAATTTGAT 60.437 41.667 9.46 0.00 0.00 2.57
4202 4862 5.220510 CGATGAAACCGGACGAAATTTGATA 60.221 40.000 9.46 0.00 0.00 2.15
4203 4863 6.511121 CGATGAAACCGGACGAAATTTGATAT 60.511 38.462 9.46 0.00 0.00 1.63
4204 4864 7.306925 CGATGAAACCGGACGAAATTTGATATA 60.307 37.037 9.46 0.00 0.00 0.86
4205 4865 7.612668 TGAAACCGGACGAAATTTGATATAA 57.387 32.000 9.46 0.00 0.00 0.98
4206 4866 7.690228 TGAAACCGGACGAAATTTGATATAAG 58.310 34.615 9.46 0.00 0.00 1.73
4207 4867 5.668558 ACCGGACGAAATTTGATATAAGC 57.331 39.130 9.46 0.00 0.00 3.09
4208 4868 5.120399 ACCGGACGAAATTTGATATAAGCA 58.880 37.500 9.46 0.00 0.00 3.91
4209 4869 5.763204 ACCGGACGAAATTTGATATAAGCAT 59.237 36.000 9.46 0.00 0.00 3.79
4210 4870 6.079763 CCGGACGAAATTTGATATAAGCATG 58.920 40.000 0.00 0.00 0.00 4.06
4211 4871 6.079763 CGGACGAAATTTGATATAAGCATGG 58.920 40.000 0.00 0.00 0.00 3.66
4212 4872 5.858581 GGACGAAATTTGATATAAGCATGGC 59.141 40.000 0.00 0.00 0.00 4.40
4213 4873 5.451908 ACGAAATTTGATATAAGCATGGCG 58.548 37.500 0.00 0.00 0.00 5.69
4214 4874 4.853196 CGAAATTTGATATAAGCATGGCGG 59.147 41.667 0.00 0.00 0.00 6.13
4215 4875 5.334802 CGAAATTTGATATAAGCATGGCGGA 60.335 40.000 0.00 0.00 0.00 5.54
4216 4876 6.594788 AAATTTGATATAAGCATGGCGGAT 57.405 33.333 0.00 0.00 0.00 4.18
4217 4877 6.594788 AATTTGATATAAGCATGGCGGATT 57.405 33.333 0.00 0.00 0.00 3.01
4218 4878 6.594788 ATTTGATATAAGCATGGCGGATTT 57.405 33.333 0.00 0.00 0.00 2.17
4219 4879 5.627499 TTGATATAAGCATGGCGGATTTC 57.373 39.130 0.00 0.00 0.00 2.17
4220 4880 4.650734 TGATATAAGCATGGCGGATTTCA 58.349 39.130 0.00 0.00 0.00 2.69
4221 4881 5.255687 TGATATAAGCATGGCGGATTTCAT 58.744 37.500 0.00 0.00 0.00 2.57
4222 4882 5.711506 TGATATAAGCATGGCGGATTTCATT 59.288 36.000 0.00 0.00 0.00 2.57
4223 4883 2.589798 AAGCATGGCGGATTTCATTG 57.410 45.000 0.00 0.00 0.00 2.82
4224 4884 1.766494 AGCATGGCGGATTTCATTGA 58.234 45.000 0.00 0.00 0.00 2.57
4225 4885 2.101783 AGCATGGCGGATTTCATTGAA 58.898 42.857 0.00 0.00 0.00 2.69
4226 4886 2.496871 AGCATGGCGGATTTCATTGAAA 59.503 40.909 13.88 13.88 35.94 2.69
4227 4887 3.055963 AGCATGGCGGATTTCATTGAAAA 60.056 39.130 15.34 0.00 35.11 2.29
4228 4888 3.872771 GCATGGCGGATTTCATTGAAAAT 59.127 39.130 15.34 5.12 35.11 1.82
4229 4889 5.049167 GCATGGCGGATTTCATTGAAAATA 58.951 37.500 15.34 0.00 35.11 1.40
4230 4890 5.176223 GCATGGCGGATTTCATTGAAAATAG 59.824 40.000 15.34 10.29 35.11 1.73
4231 4891 5.261209 TGGCGGATTTCATTGAAAATAGG 57.739 39.130 15.34 7.08 35.11 2.57
4232 4892 4.952957 TGGCGGATTTCATTGAAAATAGGA 59.047 37.500 15.34 0.00 35.11 2.94
4233 4893 5.598005 TGGCGGATTTCATTGAAAATAGGAT 59.402 36.000 15.34 0.00 35.11 3.24
4234 4894 6.775142 TGGCGGATTTCATTGAAAATAGGATA 59.225 34.615 15.34 0.00 35.11 2.59
4235 4895 7.286546 TGGCGGATTTCATTGAAAATAGGATAA 59.713 33.333 15.34 0.00 35.11 1.75
4236 4896 8.306761 GGCGGATTTCATTGAAAATAGGATAAT 58.693 33.333 15.34 0.00 35.11 1.28
4237 4897 9.696917 GCGGATTTCATTGAAAATAGGATAATT 57.303 29.630 15.34 0.00 35.11 1.40
4255 4915 8.770828 AGGATAATTTGTACATAAAATCGGACG 58.229 33.333 0.00 0.00 0.00 4.79
4256 4916 8.767085 GGATAATTTGTACATAAAATCGGACGA 58.233 33.333 0.00 0.00 0.00 4.20
4277 4937 6.810888 CGATATTTCGTCCGGTAAACTAAA 57.189 37.500 0.00 0.00 40.53 1.85
4278 4938 7.220599 CGATATTTCGTCCGGTAAACTAAAA 57.779 36.000 0.00 0.00 40.53 1.52
4279 4939 7.674564 CGATATTTCGTCCGGTAAACTAAAAA 58.325 34.615 0.00 0.00 40.53 1.94
4280 4940 7.632132 CGATATTTCGTCCGGTAAACTAAAAAC 59.368 37.037 0.00 0.00 40.53 2.43
4281 4941 5.416862 TTTCGTCCGGTAAACTAAAAACC 57.583 39.130 0.00 0.00 0.00 3.27
4282 4942 4.335400 TCGTCCGGTAAACTAAAAACCT 57.665 40.909 0.00 0.00 0.00 3.50
4283 4943 4.702831 TCGTCCGGTAAACTAAAAACCTT 58.297 39.130 0.00 0.00 0.00 3.50
4284 4944 5.848406 TCGTCCGGTAAACTAAAAACCTTA 58.152 37.500 0.00 0.00 0.00 2.69
4285 4945 6.284459 TCGTCCGGTAAACTAAAAACCTTAA 58.716 36.000 0.00 0.00 0.00 1.85
4286 4946 6.763610 TCGTCCGGTAAACTAAAAACCTTAAA 59.236 34.615 0.00 0.00 0.00 1.52
4287 4947 7.281100 TCGTCCGGTAAACTAAAAACCTTAAAA 59.719 33.333 0.00 0.00 0.00 1.52
4288 4948 8.075574 CGTCCGGTAAACTAAAAACCTTAAAAT 58.924 33.333 0.00 0.00 0.00 1.82
4304 4964 9.590828 AACCTTAAAATAAAACCCTAACTAGCA 57.409 29.630 0.00 0.00 0.00 3.49
4305 4965 9.763837 ACCTTAAAATAAAACCCTAACTAGCAT 57.236 29.630 0.00 0.00 0.00 3.79
4314 4974 8.959705 AAAACCCTAACTAGCATATACTTCAC 57.040 34.615 0.00 0.00 0.00 3.18
4315 4975 7.670605 AACCCTAACTAGCATATACTTCACA 57.329 36.000 0.00 0.00 0.00 3.58
4316 4976 7.291411 ACCCTAACTAGCATATACTTCACAG 57.709 40.000 0.00 0.00 0.00 3.66
4317 4977 6.839657 ACCCTAACTAGCATATACTTCACAGT 59.160 38.462 0.00 0.00 36.99 3.55
4318 4978 7.148641 CCCTAACTAGCATATACTTCACAGTG 58.851 42.308 0.00 0.00 34.06 3.66
4319 4979 7.014326 CCCTAACTAGCATATACTTCACAGTGA 59.986 40.741 0.00 0.00 34.06 3.41
4320 4980 7.863375 CCTAACTAGCATATACTTCACAGTGAC 59.137 40.741 1.52 0.00 34.06 3.67
4321 4981 6.150396 ACTAGCATATACTTCACAGTGACC 57.850 41.667 1.52 0.00 34.06 4.02
4322 4982 5.894393 ACTAGCATATACTTCACAGTGACCT 59.106 40.000 1.52 0.00 34.06 3.85
4323 4983 5.269505 AGCATATACTTCACAGTGACCTC 57.730 43.478 1.52 0.00 34.06 3.85
4324 4984 4.045104 GCATATACTTCACAGTGACCTCG 58.955 47.826 1.52 0.00 34.06 4.63
4325 4985 4.440250 GCATATACTTCACAGTGACCTCGT 60.440 45.833 1.52 1.28 34.06 4.18
4326 4986 5.220989 GCATATACTTCACAGTGACCTCGTA 60.221 44.000 1.52 3.50 34.06 3.43
4327 4987 6.679638 GCATATACTTCACAGTGACCTCGTAA 60.680 42.308 1.52 0.00 34.06 3.18
4328 4988 3.644884 ACTTCACAGTGACCTCGTAAG 57.355 47.619 1.52 0.00 0.00 2.34
4329 4989 2.957006 ACTTCACAGTGACCTCGTAAGT 59.043 45.455 1.52 0.00 39.48 2.24
4330 4990 3.004524 ACTTCACAGTGACCTCGTAAGTC 59.995 47.826 1.52 0.00 39.48 3.01
4331 4991 2.578786 TCACAGTGACCTCGTAAGTCA 58.421 47.619 0.00 1.70 41.84 3.41
4332 4992 3.154710 TCACAGTGACCTCGTAAGTCAT 58.845 45.455 0.00 0.00 45.45 3.06
4333 4993 3.057526 TCACAGTGACCTCGTAAGTCATG 60.058 47.826 0.00 9.20 45.45 3.07
4334 4994 2.263077 CAGTGACCTCGTAAGTCATGC 58.737 52.381 7.88 0.00 45.45 4.06
4335 4995 1.204941 AGTGACCTCGTAAGTCATGCC 59.795 52.381 7.88 0.00 45.45 4.40
4336 4996 1.067142 GTGACCTCGTAAGTCATGCCA 60.067 52.381 7.88 0.00 45.45 4.92
4337 4997 1.204704 TGACCTCGTAAGTCATGCCAG 59.795 52.381 1.70 0.00 39.29 4.85
4338 4998 0.537188 ACCTCGTAAGTCATGCCAGG 59.463 55.000 0.00 0.00 39.48 4.45
4339 4999 0.811616 CCTCGTAAGTCATGCCAGGC 60.812 60.000 3.66 3.66 39.48 4.85
4340 5000 0.176680 CTCGTAAGTCATGCCAGGCT 59.823 55.000 14.15 0.00 39.48 4.58
4341 5001 0.108186 TCGTAAGTCATGCCAGGCTG 60.108 55.000 14.15 7.75 39.48 4.85
4342 5002 1.091771 CGTAAGTCATGCCAGGCTGG 61.092 60.000 29.44 29.44 41.55 4.85
4364 5024 2.835431 CGGCTCCTCCTCCGTCAT 60.835 66.667 0.00 0.00 40.72 3.06
4365 5025 2.851071 CGGCTCCTCCTCCGTCATC 61.851 68.421 0.00 0.00 40.72 2.92
4366 5026 2.725008 GCTCCTCCTCCGTCATCG 59.275 66.667 0.00 0.00 0.00 3.84
4376 5036 3.538841 CGTCATCGGCGCCTAATC 58.461 61.111 26.68 9.97 0.00 1.75
4377 5037 2.022129 CGTCATCGGCGCCTAATCC 61.022 63.158 26.68 8.55 0.00 3.01
4378 5038 2.022129 GTCATCGGCGCCTAATCCG 61.022 63.158 26.68 10.29 46.52 4.18
4379 5039 2.738521 CATCGGCGCCTAATCCGG 60.739 66.667 26.68 6.92 45.31 5.14
4380 5040 4.681978 ATCGGCGCCTAATCCGGC 62.682 66.667 26.68 0.00 45.31 6.13
4386 5046 3.952811 GCCTAATCCGGCGTCATC 58.047 61.111 6.01 0.00 40.79 2.92
4387 5047 2.022129 GCCTAATCCGGCGTCATCG 61.022 63.158 6.01 0.00 40.79 3.84
4388 5048 1.362717 CCTAATCCGGCGTCATCGT 59.637 57.895 6.01 0.00 39.49 3.73
4389 5049 0.663568 CCTAATCCGGCGTCATCGTC 60.664 60.000 6.01 0.00 39.49 4.20
4395 5055 2.943034 GGCGTCATCGTCGTCGTC 60.943 66.667 1.33 0.00 39.49 4.20
4396 5056 3.295462 GCGTCATCGTCGTCGTCG 61.295 66.667 5.50 5.50 39.49 5.12
4397 5057 2.643790 CGTCATCGTCGTCGTCGG 60.644 66.667 11.74 0.00 38.33 4.79
4398 5058 2.277120 GTCATCGTCGTCGTCGGG 60.277 66.667 11.74 5.31 38.33 5.14
4399 5059 4.170062 TCATCGTCGTCGTCGGGC 62.170 66.667 11.74 0.00 38.33 6.13
4400 5060 4.175489 CATCGTCGTCGTCGGGCT 62.175 66.667 11.74 0.00 38.33 5.19
4401 5061 3.437795 ATCGTCGTCGTCGGGCTT 61.438 61.111 11.74 0.00 38.33 4.35
4402 5062 3.392595 ATCGTCGTCGTCGGGCTTC 62.393 63.158 11.74 0.00 38.33 3.86
4417 5077 4.367023 TTCGGGCGACGGAAGGTG 62.367 66.667 7.24 0.00 43.74 4.00
4424 5084 4.353437 GACGGAAGGTGACGGCGT 62.353 66.667 14.65 14.65 0.00 5.68
4425 5085 3.853597 GACGGAAGGTGACGGCGTT 62.854 63.158 16.19 0.00 0.00 4.84
4426 5086 3.411351 CGGAAGGTGACGGCGTTG 61.411 66.667 16.19 0.00 0.00 4.10
4427 5087 3.723348 GGAAGGTGACGGCGTTGC 61.723 66.667 16.19 10.24 0.00 4.17
4428 5088 4.072088 GAAGGTGACGGCGTTGCG 62.072 66.667 16.19 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 1.838913 ACAAACGCATGAAGTTGCAC 58.161 45.000 0.00 0.00 42.91 4.57
32 33 8.132362 TGTTCTTTTATTACAAACGCATGAAGT 58.868 29.630 0.00 0.00 0.00 3.01
34 35 9.123709 GATGTTCTTTTATTACAAACGCATGAA 57.876 29.630 0.00 0.00 0.00 2.57
36 37 7.009174 GGGATGTTCTTTTATTACAAACGCATG 59.991 37.037 0.00 0.00 0.00 4.06
39 40 6.383415 TGGGATGTTCTTTTATTACAAACGC 58.617 36.000 0.00 0.00 0.00 4.84
71 72 7.735917 TGTCCTCCGTAGAAATGATTCATATT 58.264 34.615 0.00 0.00 38.06 1.28
150 151 7.600960 TGCTTATAATTGTGCATTCAGTTTCA 58.399 30.769 0.00 0.00 0.00 2.69
161 162 8.517878 AGGACATAATGATGCTTATAATTGTGC 58.482 33.333 0.00 0.00 36.43 4.57
164 165 8.939929 ACGAGGACATAATGATGCTTATAATTG 58.060 33.333 0.00 0.00 36.43 2.32
171 172 4.122776 GTGACGAGGACATAATGATGCTT 58.877 43.478 0.00 0.00 36.43 3.91
189 190 4.394300 CCTGAAATGTTGATCCAGAGTGAC 59.606 45.833 0.00 0.00 0.00 3.67
203 205 3.843422 TCATTCAACCCACCTGAAATGT 58.157 40.909 0.00 0.00 36.43 2.71
210 212 2.379907 ACCAGAATCATTCAACCCACCT 59.620 45.455 0.00 0.00 0.00 4.00
215 217 2.094545 GGCACACCAGAATCATTCAACC 60.095 50.000 0.00 0.00 35.26 3.77
237 239 7.726216 TGTAATGGATACGAAATCAGTGAGAT 58.274 34.615 0.00 0.00 37.32 2.75
248 250 7.061566 TGATCAAGGATGTAATGGATACGAA 57.938 36.000 0.00 0.00 37.32 3.85
308 310 1.332904 GGCTTCACAGTGAAAACGACG 60.333 52.381 16.85 5.63 35.73 5.12
428 430 2.267188 ACGCGCGACTAAAATGACTA 57.733 45.000 39.36 0.00 0.00 2.59
553 555 3.742369 CGATAAATTTATACGGTGCGGGT 59.258 43.478 10.68 0.00 0.00 5.28
626 792 7.652909 CCTGAGCATTTCTTACAAAAACATCAA 59.347 33.333 0.00 0.00 0.00 2.57
629 795 5.928264 GCCTGAGCATTTCTTACAAAAACAT 59.072 36.000 0.00 0.00 39.53 2.71
698 865 0.109132 GTTTGGAAAGCAGCGATGGG 60.109 55.000 1.46 0.00 0.00 4.00
701 868 1.896220 TCAGTTTGGAAAGCAGCGAT 58.104 45.000 0.00 0.00 0.00 4.58
747 914 8.220755 TGGCGACTTTAAAAATATGATTAGCT 57.779 30.769 0.00 0.00 0.00 3.32
861 1030 0.453390 CCGGCTTCAGCATTTTCTCC 59.547 55.000 0.30 0.00 44.36 3.71
908 1077 4.471548 AGTACAGAACCTGTGTCTGTAGT 58.528 43.478 13.17 13.40 45.01 2.73
937 1119 5.418840 GGAAAGTTAGGCATTGGAATGAAGA 59.581 40.000 3.47 0.00 38.70 2.87
1008 1190 0.034089 GCAAGCAGGGTAAGGTGGAT 60.034 55.000 0.00 0.00 0.00 3.41
1090 1278 0.675633 GTGGCTGCATCAAGGTTTGT 59.324 50.000 0.50 0.00 0.00 2.83
1165 1353 3.198068 AGTAGTGCTTGAACGCATATGG 58.802 45.455 4.56 0.00 42.62 2.74
1232 1420 2.093658 TCCATAGCCTCGAAGAACCAAC 60.094 50.000 0.00 0.00 34.09 3.77
1392 1588 4.112634 ACAGCCAGGTCCTGAAAATTTA 57.887 40.909 21.23 0.00 32.44 1.40
1399 1595 0.687354 GAAGAACAGCCAGGTCCTGA 59.313 55.000 21.23 0.00 33.03 3.86
1479 1675 2.555199 GCATACGGATTGAGCTCAAGT 58.445 47.619 31.14 25.02 39.47 3.16
1574 1823 5.546621 AAGTTCACCAGACAGTAAGCTAA 57.453 39.130 0.00 0.00 0.00 3.09
1665 1915 3.112263 TGTCTCCCGGTGGATCTATTTT 58.888 45.455 0.00 0.00 40.80 1.82
1732 1982 5.972935 TGAAAGAAAACCCTTCCTTGTTTC 58.027 37.500 0.00 0.00 33.76 2.78
1746 1996 4.141981 TGTGCTGCAAAGGATGAAAGAAAA 60.142 37.500 2.77 0.00 0.00 2.29
1842 2116 1.217689 AGACCTGCATAGCTCTCTCCT 59.782 52.381 0.00 0.00 0.00 3.69
1984 2258 9.860650 AGTCAGATCATGAGTAGTAAGTTAGAT 57.139 33.333 0.09 0.00 39.94 1.98
1990 2264 7.763528 AGCAAAAGTCAGATCATGAGTAGTAAG 59.236 37.037 0.09 0.00 40.90 2.34
1993 2267 6.047511 AGCAAAAGTCAGATCATGAGTAGT 57.952 37.500 0.09 0.00 40.90 2.73
2017 2291 9.739276 TGTCCTAGTGAATGTAAAATCAGAATT 57.261 29.630 0.00 0.00 0.00 2.17
2023 2302 9.095065 ACGTAATGTCCTAGTGAATGTAAAATC 57.905 33.333 0.00 0.00 0.00 2.17
2028 2308 6.406177 GGGAACGTAATGTCCTAGTGAATGTA 60.406 42.308 4.10 0.00 0.00 2.29
2029 2309 5.416947 GGAACGTAATGTCCTAGTGAATGT 58.583 41.667 0.00 0.00 0.00 2.71
2031 2318 4.141779 GGGGAACGTAATGTCCTAGTGAAT 60.142 45.833 4.10 0.00 0.00 2.57
2032 2319 3.196254 GGGGAACGTAATGTCCTAGTGAA 59.804 47.826 4.10 0.00 0.00 3.18
2098 2385 7.136119 TGCCTTTCAAGTTTATGTAGTTTTCG 58.864 34.615 0.00 0.00 0.00 3.46
2116 2403 1.678101 GTACATGCCAGGATGCCTTTC 59.322 52.381 0.00 0.00 31.97 2.62
2176 2465 2.159338 ACATTCAGGCAATCGCAATCAC 60.159 45.455 0.00 0.00 41.24 3.06
2178 2467 2.857592 ACATTCAGGCAATCGCAATC 57.142 45.000 0.00 0.00 41.24 2.67
2179 2468 2.492881 TGAACATTCAGGCAATCGCAAT 59.507 40.909 0.00 0.00 33.82 3.56
2265 2604 2.044352 TCGACGATCCCCTGCAGA 60.044 61.111 17.39 0.00 0.00 4.26
2399 2738 1.079503 GATGAGGTTGTTGAGGACGC 58.920 55.000 0.00 0.00 0.00 5.19
2407 2746 4.748892 CTGTAGATGTCGATGAGGTTGTT 58.251 43.478 0.00 0.00 0.00 2.83
2526 2871 6.183360 ACGAAAATGGCTGAAACTTTTAGGAA 60.183 34.615 0.00 0.00 0.00 3.36
2560 2918 4.124351 GACCACGCGGACCGATCA 62.124 66.667 20.50 0.00 41.02 2.92
2570 2928 2.677836 TGAGCAGATTTATTGACCACGC 59.322 45.455 0.00 0.00 0.00 5.34
2571 2929 4.787563 GCATGAGCAGATTTATTGACCACG 60.788 45.833 0.00 0.00 41.58 4.94
2754 3139 3.118445 AGCATTTCAGCTAGGAGGAGAAC 60.118 47.826 0.00 0.00 44.50 3.01
2815 3201 2.794981 GCTGCATACAAGCTGAGCAATG 60.795 50.000 7.39 8.02 35.73 2.82
2820 3217 0.649475 GTCGCTGCATACAAGCTGAG 59.351 55.000 0.00 0.00 35.73 3.35
2823 3220 0.534412 AGAGTCGCTGCATACAAGCT 59.466 50.000 0.00 0.00 34.99 3.74
2830 3227 1.135139 ACGTTGATAGAGTCGCTGCAT 59.865 47.619 0.00 0.00 0.00 3.96
2851 3259 1.511850 TGTCAGAATCGTGCCACAAG 58.488 50.000 0.00 0.00 0.00 3.16
2875 3283 1.874019 CCTGACGATCGGAAGCACG 60.874 63.158 20.98 2.63 36.04 5.34
2926 3334 4.341806 ACATCTCAGATGCTCTACCTGAAG 59.658 45.833 15.07 0.00 36.61 3.02
2954 3362 2.882761 ACGAAGACAAAACCTAAAGGCC 59.117 45.455 0.00 0.00 39.32 5.19
3004 3418 4.385825 AGAGCAACGGAAAATGACACTAA 58.614 39.130 0.00 0.00 0.00 2.24
3052 3466 1.099879 ACGTCGTAGGGATCCTTCCG 61.100 60.000 12.58 7.17 43.63 4.30
3158 3735 6.404293 CGATGGGGTTGTCCAATTAGTTAAAG 60.404 42.308 0.00 0.00 40.62 1.85
3176 3774 3.622060 AAGCAACCGGTCGATGGGG 62.622 63.158 8.04 4.92 0.00 4.96
3187 3785 1.070601 AGCAACCAATTGGAAGCAACC 59.929 47.619 32.03 15.66 39.60 3.77
3272 3889 0.324738 TCCACCAACCTGCAACCAAA 60.325 50.000 0.00 0.00 0.00 3.28
3437 4054 6.595326 CGAATCAACCATGGCATATACAGTAT 59.405 38.462 13.04 0.00 0.00 2.12
3438 4055 5.931724 CGAATCAACCATGGCATATACAGTA 59.068 40.000 13.04 0.00 0.00 2.74
3439 4056 4.756642 CGAATCAACCATGGCATATACAGT 59.243 41.667 13.04 0.00 0.00 3.55
3441 4058 3.501828 GCGAATCAACCATGGCATATACA 59.498 43.478 13.04 0.00 0.00 2.29
3442 4059 3.501828 TGCGAATCAACCATGGCATATAC 59.498 43.478 13.04 0.00 0.00 1.47
3480 4099 5.698089 TGAAATCAATCACCTCGATCTATGC 59.302 40.000 0.00 0.00 31.11 3.14
3482 4101 6.877855 CCATGAAATCAATCACCTCGATCTAT 59.122 38.462 0.00 0.00 31.11 1.98
3484 4103 5.061853 CCATGAAATCAATCACCTCGATCT 58.938 41.667 0.00 0.00 31.11 2.75
3491 4110 5.138125 ACACAACCATGAAATCAATCACC 57.862 39.130 0.00 0.00 30.82 4.02
3495 4118 9.905713 AGTATACTACACAACCATGAAATCAAT 57.094 29.630 2.75 0.00 0.00 2.57
3514 4137 5.248477 AGAGAGCAGAGCTAGCTAGTATACT 59.752 44.000 19.38 10.87 43.58 2.12
3515 4138 5.488341 AGAGAGCAGAGCTAGCTAGTATAC 58.512 45.833 19.38 3.71 43.58 1.47
3516 4139 5.755409 AGAGAGCAGAGCTAGCTAGTATA 57.245 43.478 19.38 0.00 43.58 1.47
3517 4140 4.640771 AGAGAGCAGAGCTAGCTAGTAT 57.359 45.455 19.38 11.14 43.58 2.12
3518 4141 4.559906 CGTAGAGAGCAGAGCTAGCTAGTA 60.560 50.000 19.38 0.00 43.58 1.82
3519 4142 3.740115 GTAGAGAGCAGAGCTAGCTAGT 58.260 50.000 19.38 5.07 43.58 2.57
3526 4149 2.003658 GCAGCGTAGAGAGCAGAGCT 62.004 60.000 0.00 0.00 43.88 4.09
3550 4174 1.657751 GGCCTGCTCGATTGGAAACC 61.658 60.000 0.00 0.00 0.00 3.27
3556 4180 2.374830 ATCCTCGGCCTGCTCGATTG 62.375 60.000 0.00 0.55 36.01 2.67
3570 4194 6.599244 TGTGTTCTACAATGAAATCCATCCTC 59.401 38.462 0.00 0.00 36.06 3.71
3587 4215 6.481976 CCACAAGTTGTACAAGATGTGTTCTA 59.518 38.462 31.59 3.00 41.98 2.10
3589 4217 5.295787 TCCACAAGTTGTACAAGATGTGTTC 59.704 40.000 31.59 13.69 41.98 3.18
3596 4224 6.767524 ACAAAATCCACAAGTTGTACAAGA 57.232 33.333 8.98 1.79 32.58 3.02
3629 4257 1.829222 GGAAACACCGTCCATCCTCTA 59.171 52.381 0.00 0.00 35.05 2.43
3661 4298 5.840243 TTAATCTCGGTTTCGGATGTCTA 57.160 39.130 0.00 0.00 36.95 2.59
3662 4299 4.730949 TTAATCTCGGTTTCGGATGTCT 57.269 40.909 0.00 0.00 36.95 3.41
3664 4301 8.985805 GTTATTATTAATCTCGGTTTCGGATGT 58.014 33.333 0.00 0.00 36.95 3.06
3668 4305 6.148315 GGGGTTATTATTAATCTCGGTTTCGG 59.852 42.308 0.00 0.00 36.95 4.30
3681 4318 6.104840 TGGAATGGTGGATGGGGTTATTATTA 59.895 38.462 0.00 0.00 0.00 0.98
3687 4324 1.687492 TGGAATGGTGGATGGGGTTA 58.313 50.000 0.00 0.00 0.00 2.85
3688 4325 0.789687 TTGGAATGGTGGATGGGGTT 59.210 50.000 0.00 0.00 0.00 4.11
3689 4326 0.336048 CTTGGAATGGTGGATGGGGT 59.664 55.000 0.00 0.00 0.00 4.95
3690 4327 0.336048 ACTTGGAATGGTGGATGGGG 59.664 55.000 0.00 0.00 0.00 4.96
3691 4328 2.236489 AACTTGGAATGGTGGATGGG 57.764 50.000 0.00 0.00 0.00 4.00
3692 4329 3.434309 AGAAACTTGGAATGGTGGATGG 58.566 45.455 0.00 0.00 0.00 3.51
3693 4330 5.105756 GGTTAGAAACTTGGAATGGTGGATG 60.106 44.000 0.00 0.00 0.00 3.51
3694 4331 5.016831 GGTTAGAAACTTGGAATGGTGGAT 58.983 41.667 0.00 0.00 0.00 3.41
3695 4332 4.141135 TGGTTAGAAACTTGGAATGGTGGA 60.141 41.667 0.00 0.00 0.00 4.02
3696 4333 4.148838 TGGTTAGAAACTTGGAATGGTGG 58.851 43.478 0.00 0.00 0.00 4.61
3697 4334 5.982890 ATGGTTAGAAACTTGGAATGGTG 57.017 39.130 0.00 0.00 0.00 4.17
3701 4338 7.454380 TGGAATGAATGGTTAGAAACTTGGAAT 59.546 33.333 0.00 0.00 0.00 3.01
3702 4339 6.780031 TGGAATGAATGGTTAGAAACTTGGAA 59.220 34.615 0.00 0.00 0.00 3.53
3708 4345 5.856455 CACGTTGGAATGAATGGTTAGAAAC 59.144 40.000 0.00 0.00 0.00 2.78
3709 4346 5.563867 GCACGTTGGAATGAATGGTTAGAAA 60.564 40.000 0.00 0.00 0.00 2.52
3721 4358 0.314935 AAGCTTGGCACGTTGGAATG 59.685 50.000 0.00 0.00 0.00 2.67
3734 4371 1.514678 TAGCCGTTGTGCCAAGCTTG 61.515 55.000 19.93 19.93 35.03 4.01
3735 4372 1.228124 TAGCCGTTGTGCCAAGCTT 60.228 52.632 0.00 0.00 35.03 3.74
3736 4373 1.672356 CTAGCCGTTGTGCCAAGCT 60.672 57.895 6.81 6.81 37.58 3.74
3737 4374 2.690778 CCTAGCCGTTGTGCCAAGC 61.691 63.158 0.00 0.00 0.00 4.01
3738 4375 0.392998 ATCCTAGCCGTTGTGCCAAG 60.393 55.000 0.00 0.00 0.00 3.61
3770 4408 1.741706 GTGGATGCAGAATCACCTGTG 59.258 52.381 0.00 0.00 36.98 3.66
3774 4412 1.600957 CATCGTGGATGCAGAATCACC 59.399 52.381 0.00 0.00 36.98 4.02
3804 4447 1.641577 GTAAGACGCCACATGACTCC 58.358 55.000 0.00 0.00 0.00 3.85
3807 4450 1.359848 CAGGTAAGACGCCACATGAC 58.640 55.000 0.00 0.00 0.00 3.06
3887 4536 2.581208 AAATGGTGCATGCATGGCGG 62.581 55.000 25.64 2.89 0.00 6.13
3940 4592 1.028868 ATTCCCTTCGCTCTGCTTGC 61.029 55.000 0.00 0.00 0.00 4.01
3943 4599 0.326264 ACAATTCCCTTCGCTCTGCT 59.674 50.000 0.00 0.00 0.00 4.24
3952 4608 1.813513 CTCGTGAGCACAATTCCCTT 58.186 50.000 1.20 0.00 0.00 3.95
3971 4627 0.794229 CGTTTCACATGGCATCGTGC 60.794 55.000 18.94 9.22 44.08 5.34
3994 4654 7.386025 CCAAAAGTCAAATCAGAATTCCTTTCC 59.614 37.037 0.65 0.00 34.67 3.13
3999 4659 6.101650 ACCCAAAAGTCAAATCAGAATTCC 57.898 37.500 0.65 0.00 0.00 3.01
4009 4669 2.031120 CAGCTGGACCCAAAAGTCAAA 58.969 47.619 5.57 0.00 38.59 2.69
4010 4670 1.064017 ACAGCTGGACCCAAAAGTCAA 60.064 47.619 19.93 0.00 38.59 3.18
4014 4674 2.493278 CCATAACAGCTGGACCCAAAAG 59.507 50.000 19.93 0.00 35.70 2.27
4017 4677 0.331278 CCCATAACAGCTGGACCCAA 59.669 55.000 19.93 0.00 35.70 4.12
4022 4682 0.183492 GATGCCCCATAACAGCTGGA 59.817 55.000 19.93 5.78 35.70 3.86
4023 4683 0.184451 AGATGCCCCATAACAGCTGG 59.816 55.000 19.93 0.00 29.89 4.85
4024 4684 1.602311 GAGATGCCCCATAACAGCTG 58.398 55.000 13.48 13.48 31.53 4.24
4025 4685 0.475906 GGAGATGCCCCATAACAGCT 59.524 55.000 0.00 0.00 34.70 4.24
4026 4686 0.183492 TGGAGATGCCCCATAACAGC 59.817 55.000 0.00 0.00 34.97 4.40
4027 4687 2.301346 GTTGGAGATGCCCCATAACAG 58.699 52.381 0.00 0.00 34.97 3.16
4028 4688 1.408127 CGTTGGAGATGCCCCATAACA 60.408 52.381 0.00 0.00 34.97 2.41
4029 4689 1.308998 CGTTGGAGATGCCCCATAAC 58.691 55.000 0.00 0.00 34.97 1.89
4030 4690 0.182537 CCGTTGGAGATGCCCCATAA 59.817 55.000 0.00 0.00 34.97 1.90
4031 4691 1.836391 CCGTTGGAGATGCCCCATA 59.164 57.895 0.00 0.00 34.97 2.74
4032 4692 2.597340 CCGTTGGAGATGCCCCAT 59.403 61.111 0.00 0.00 34.97 4.00
4033 4693 4.424711 GCCGTTGGAGATGCCCCA 62.425 66.667 0.00 0.00 34.97 4.96
4034 4694 3.936772 TTGCCGTTGGAGATGCCCC 62.937 63.158 0.00 0.00 34.97 5.80
4035 4695 2.361104 TTGCCGTTGGAGATGCCC 60.361 61.111 0.00 0.00 34.97 5.36
4036 4696 2.700773 GGTTGCCGTTGGAGATGCC 61.701 63.158 0.00 0.00 37.10 4.40
4037 4697 2.700773 GGGTTGCCGTTGGAGATGC 61.701 63.158 0.00 0.00 0.00 3.91
4038 4698 2.398554 CGGGTTGCCGTTGGAGATG 61.399 63.158 0.00 0.00 0.00 2.90
4039 4699 1.546589 TACGGGTTGCCGTTGGAGAT 61.547 55.000 0.00 0.00 44.38 2.75
4040 4700 1.756408 TTACGGGTTGCCGTTGGAGA 61.756 55.000 0.00 0.00 44.38 3.71
4041 4701 0.885596 TTTACGGGTTGCCGTTGGAG 60.886 55.000 0.00 0.00 44.38 3.86
4042 4702 0.250814 ATTTACGGGTTGCCGTTGGA 60.251 50.000 0.00 0.00 44.38 3.53
4043 4703 0.599060 AATTTACGGGTTGCCGTTGG 59.401 50.000 0.00 0.00 44.38 3.77
4044 4704 2.321263 GAAATTTACGGGTTGCCGTTG 58.679 47.619 0.00 0.00 44.38 4.10
4045 4705 1.270274 GGAAATTTACGGGTTGCCGTT 59.730 47.619 0.00 0.00 44.38 4.44
4047 4707 1.131693 GAGGAAATTTACGGGTTGCCG 59.868 52.381 0.00 0.00 39.31 5.69
4048 4708 2.094906 GTGAGGAAATTTACGGGTTGCC 60.095 50.000 0.00 0.00 0.00 4.52
4049 4709 2.413634 CGTGAGGAAATTTACGGGTTGC 60.414 50.000 3.77 0.00 33.27 4.17
4050 4710 2.413634 GCGTGAGGAAATTTACGGGTTG 60.414 50.000 11.90 0.00 37.06 3.77
4051 4711 1.808343 GCGTGAGGAAATTTACGGGTT 59.192 47.619 11.90 0.00 37.06 4.11
4052 4712 1.270947 TGCGTGAGGAAATTTACGGGT 60.271 47.619 11.90 0.00 37.06 5.28
4053 4713 1.444836 TGCGTGAGGAAATTTACGGG 58.555 50.000 11.90 0.00 37.06 5.28
4054 4714 2.031683 GGATGCGTGAGGAAATTTACGG 59.968 50.000 11.90 0.00 37.06 4.02
4055 4715 2.675844 TGGATGCGTGAGGAAATTTACG 59.324 45.455 6.82 6.82 39.37 3.18
4056 4716 4.552767 CGATGGATGCGTGAGGAAATTTAC 60.553 45.833 0.00 0.00 32.68 2.01
4057 4717 3.559655 CGATGGATGCGTGAGGAAATTTA 59.440 43.478 0.00 0.00 32.68 1.40
4058 4718 2.355756 CGATGGATGCGTGAGGAAATTT 59.644 45.455 0.00 0.00 32.68 1.82
4059 4719 1.942657 CGATGGATGCGTGAGGAAATT 59.057 47.619 0.00 0.00 32.68 1.82
4060 4720 1.138859 TCGATGGATGCGTGAGGAAAT 59.861 47.619 0.00 0.00 32.68 2.17
4061 4721 0.534873 TCGATGGATGCGTGAGGAAA 59.465 50.000 0.00 0.00 32.68 3.13
4062 4722 0.179111 GTCGATGGATGCGTGAGGAA 60.179 55.000 0.00 0.00 32.68 3.36
4063 4723 1.437573 GTCGATGGATGCGTGAGGA 59.562 57.895 0.00 0.00 0.00 3.71
4064 4724 1.946156 CGTCGATGGATGCGTGAGG 60.946 63.158 0.00 0.00 0.00 3.86
4065 4725 1.946156 CCGTCGATGGATGCGTGAG 60.946 63.158 19.48 0.00 0.00 3.51
4066 4726 2.104132 CCGTCGATGGATGCGTGA 59.896 61.111 19.48 0.00 0.00 4.35
4067 4727 2.104132 TCCGTCGATGGATGCGTG 59.896 61.111 22.69 0.00 31.53 5.34
4068 4728 2.104331 GTCCGTCGATGGATGCGT 59.896 61.111 28.48 0.00 40.91 5.24
4069 4729 1.946156 CTGTCCGTCGATGGATGCG 60.946 63.158 28.48 15.80 40.91 4.73
4070 4730 0.596083 CTCTGTCCGTCGATGGATGC 60.596 60.000 28.48 17.27 40.91 3.91
4071 4731 0.031314 CCTCTGTCCGTCGATGGATG 59.969 60.000 28.48 22.49 40.91 3.51
4072 4732 0.106669 TCCTCTGTCCGTCGATGGAT 60.107 55.000 28.48 0.00 40.91 3.41
4073 4733 0.748367 CTCCTCTGTCCGTCGATGGA 60.748 60.000 22.69 22.69 35.04 3.41
4074 4734 0.748367 TCTCCTCTGTCCGTCGATGG 60.748 60.000 18.13 18.13 0.00 3.51
4075 4735 1.095600 TTCTCCTCTGTCCGTCGATG 58.904 55.000 0.00 0.00 0.00 3.84
4076 4736 1.950909 GATTCTCCTCTGTCCGTCGAT 59.049 52.381 0.00 0.00 0.00 3.59
4077 4737 1.339727 TGATTCTCCTCTGTCCGTCGA 60.340 52.381 0.00 0.00 0.00 4.20
4078 4738 1.064803 CTGATTCTCCTCTGTCCGTCG 59.935 57.143 0.00 0.00 0.00 5.12
4079 4739 2.096248 ACTGATTCTCCTCTGTCCGTC 58.904 52.381 0.00 0.00 0.00 4.79
4080 4740 2.096248 GACTGATTCTCCTCTGTCCGT 58.904 52.381 0.00 0.00 37.85 4.69
4081 4741 2.861462 GACTGATTCTCCTCTGTCCG 57.139 55.000 0.00 0.00 37.85 4.79
4083 4743 2.159310 CGTGGACTGATTCTCCTCTGTC 60.159 54.545 3.38 3.38 41.06 3.51
4084 4744 1.821753 CGTGGACTGATTCTCCTCTGT 59.178 52.381 0.00 0.00 0.00 3.41
4085 4745 1.135915 CCGTGGACTGATTCTCCTCTG 59.864 57.143 0.00 0.00 0.00 3.35
4086 4746 1.006043 TCCGTGGACTGATTCTCCTCT 59.994 52.381 0.00 0.00 0.00 3.69
4087 4747 1.135333 GTCCGTGGACTGATTCTCCTC 59.865 57.143 11.81 0.00 41.57 3.71
4088 4748 1.187087 GTCCGTGGACTGATTCTCCT 58.813 55.000 11.81 0.00 41.57 3.69
4089 4749 0.895530 TGTCCGTGGACTGATTCTCC 59.104 55.000 19.17 0.00 44.80 3.71
4090 4750 1.732732 CGTGTCCGTGGACTGATTCTC 60.733 57.143 19.17 2.14 44.80 2.87
4091 4751 0.243907 CGTGTCCGTGGACTGATTCT 59.756 55.000 19.17 0.00 44.80 2.40
4092 4752 0.736325 CCGTGTCCGTGGACTGATTC 60.736 60.000 19.17 5.07 44.80 2.52
4093 4753 1.183030 TCCGTGTCCGTGGACTGATT 61.183 55.000 19.17 0.00 44.80 2.57
4094 4754 0.970937 ATCCGTGTCCGTGGACTGAT 60.971 55.000 19.17 14.54 44.80 2.90
4095 4755 1.605451 ATCCGTGTCCGTGGACTGA 60.605 57.895 19.17 13.11 44.80 3.41
4096 4756 1.446099 CATCCGTGTCCGTGGACTG 60.446 63.158 19.17 11.70 44.80 3.51
4097 4757 2.970639 CATCCGTGTCCGTGGACT 59.029 61.111 19.17 0.00 44.80 3.85
4098 4758 2.813908 GCATCCGTGTCCGTGGAC 60.814 66.667 12.17 12.17 44.77 4.02
4099 4759 4.429212 CGCATCCGTGTCCGTGGA 62.429 66.667 0.00 0.00 38.95 4.02
4100 4760 4.429212 TCGCATCCGTGTCCGTGG 62.429 66.667 0.00 0.00 35.54 4.94
4101 4761 2.880879 CTCGCATCCGTGTCCGTG 60.881 66.667 0.00 0.00 35.54 4.94
4102 4762 3.052620 CTCTCGCATCCGTGTCCGT 62.053 63.158 0.00 0.00 35.54 4.69
4103 4763 2.278206 CTCTCGCATCCGTGTCCG 60.278 66.667 0.00 0.00 35.54 4.79
4104 4764 2.105128 CCTCTCGCATCCGTGTCC 59.895 66.667 0.00 0.00 35.54 4.02
4105 4765 1.226717 GTCCTCTCGCATCCGTGTC 60.227 63.158 0.00 0.00 35.54 3.67
4106 4766 2.885861 GTCCTCTCGCATCCGTGT 59.114 61.111 0.00 0.00 35.54 4.49
4107 4767 2.278206 CGTCCTCTCGCATCCGTG 60.278 66.667 0.00 0.00 35.54 4.94
4108 4768 2.750637 ACGTCCTCTCGCATCCGT 60.751 61.111 0.00 0.00 35.54 4.69
4109 4769 2.024871 GACGTCCTCTCGCATCCG 59.975 66.667 3.51 0.00 0.00 4.18
4110 4770 0.103208 AATGACGTCCTCTCGCATCC 59.897 55.000 14.12 0.00 31.47 3.51
4111 4771 1.202302 TGAATGACGTCCTCTCGCATC 60.202 52.381 14.12 0.00 31.47 3.91
4112 4772 0.817654 TGAATGACGTCCTCTCGCAT 59.182 50.000 14.12 0.00 32.48 4.73
4113 4773 0.601057 TTGAATGACGTCCTCTCGCA 59.399 50.000 14.12 0.00 0.00 5.10
4114 4774 0.992802 GTTGAATGACGTCCTCTCGC 59.007 55.000 14.12 0.97 0.00 5.03
4115 4775 1.986378 GTGTTGAATGACGTCCTCTCG 59.014 52.381 14.12 0.00 0.00 4.04
4116 4776 3.305398 AGTGTTGAATGACGTCCTCTC 57.695 47.619 14.12 7.36 0.00 3.20
4117 4777 3.367498 GCTAGTGTTGAATGACGTCCTCT 60.367 47.826 14.12 5.19 0.00 3.69
4118 4778 2.924290 GCTAGTGTTGAATGACGTCCTC 59.076 50.000 14.12 10.34 0.00 3.71
4119 4779 2.353803 GGCTAGTGTTGAATGACGTCCT 60.354 50.000 14.12 0.00 0.00 3.85
4120 4780 2.000447 GGCTAGTGTTGAATGACGTCC 59.000 52.381 14.12 0.00 0.00 4.79
4121 4781 1.654105 CGGCTAGTGTTGAATGACGTC 59.346 52.381 9.11 9.11 0.00 4.34
4122 4782 1.710013 CGGCTAGTGTTGAATGACGT 58.290 50.000 0.00 0.00 0.00 4.34
4123 4783 0.370273 GCGGCTAGTGTTGAATGACG 59.630 55.000 0.00 0.00 0.00 4.35
4124 4784 1.438651 TGCGGCTAGTGTTGAATGAC 58.561 50.000 0.00 0.00 0.00 3.06
4125 4785 2.401583 ATGCGGCTAGTGTTGAATGA 57.598 45.000 0.00 0.00 0.00 2.57
4126 4786 2.935849 TGTATGCGGCTAGTGTTGAATG 59.064 45.455 0.00 0.00 0.00 2.67
4127 4787 3.260475 TGTATGCGGCTAGTGTTGAAT 57.740 42.857 0.00 0.00 0.00 2.57
4128 4788 2.753055 TGTATGCGGCTAGTGTTGAA 57.247 45.000 0.00 0.00 0.00 2.69
4129 4789 2.979814 ATGTATGCGGCTAGTGTTGA 57.020 45.000 0.00 0.00 0.00 3.18
4130 4790 4.097714 CAAAATGTATGCGGCTAGTGTTG 58.902 43.478 0.00 0.00 0.00 3.33
4131 4791 4.006989 TCAAAATGTATGCGGCTAGTGTT 58.993 39.130 0.00 0.00 0.00 3.32
4132 4792 3.374058 GTCAAAATGTATGCGGCTAGTGT 59.626 43.478 0.00 0.00 0.00 3.55
4133 4793 3.373748 TGTCAAAATGTATGCGGCTAGTG 59.626 43.478 0.00 0.00 0.00 2.74
4134 4794 3.605634 TGTCAAAATGTATGCGGCTAGT 58.394 40.909 0.00 0.00 0.00 2.57
4135 4795 4.142708 TGTTGTCAAAATGTATGCGGCTAG 60.143 41.667 0.00 0.00 0.00 3.42
4136 4796 3.753797 TGTTGTCAAAATGTATGCGGCTA 59.246 39.130 0.00 0.00 0.00 3.93
4137 4797 2.556189 TGTTGTCAAAATGTATGCGGCT 59.444 40.909 0.00 0.00 0.00 5.52
4138 4798 2.940147 TGTTGTCAAAATGTATGCGGC 58.060 42.857 0.00 0.00 0.00 6.53
4139 4799 4.545610 AGTTGTTGTCAAAATGTATGCGG 58.454 39.130 0.00 0.00 35.20 5.69
4140 4800 4.318071 CGAGTTGTTGTCAAAATGTATGCG 59.682 41.667 0.00 0.00 35.20 4.73
4141 4801 5.448438 TCGAGTTGTTGTCAAAATGTATGC 58.552 37.500 0.00 0.00 35.20 3.14
4142 4802 6.359617 GGTTCGAGTTGTTGTCAAAATGTATG 59.640 38.462 0.00 0.00 35.20 2.39
4143 4803 6.435428 GGTTCGAGTTGTTGTCAAAATGTAT 58.565 36.000 0.00 0.00 35.20 2.29
4144 4804 5.502706 CGGTTCGAGTTGTTGTCAAAATGTA 60.503 40.000 0.00 0.00 35.20 2.29
4145 4805 4.668289 GGTTCGAGTTGTTGTCAAAATGT 58.332 39.130 0.00 0.00 35.20 2.71
4146 4806 3.723764 CGGTTCGAGTTGTTGTCAAAATG 59.276 43.478 0.00 0.00 35.20 2.32
4147 4807 3.623960 TCGGTTCGAGTTGTTGTCAAAAT 59.376 39.130 0.00 0.00 35.20 1.82
4148 4808 3.001414 TCGGTTCGAGTTGTTGTCAAAA 58.999 40.909 0.00 0.00 35.20 2.44
4149 4809 2.619147 TCGGTTCGAGTTGTTGTCAAA 58.381 42.857 0.00 0.00 35.20 2.69
4150 4810 2.296831 TCGGTTCGAGTTGTTGTCAA 57.703 45.000 0.00 0.00 0.00 3.18
4151 4811 1.928503 GTTCGGTTCGAGTTGTTGTCA 59.071 47.619 0.00 0.00 37.14 3.58
4152 4812 1.071698 CGTTCGGTTCGAGTTGTTGTC 60.072 52.381 0.00 0.00 37.14 3.18
4153 4813 0.925466 CGTTCGGTTCGAGTTGTTGT 59.075 50.000 0.00 0.00 37.14 3.32
4154 4814 1.202203 TCGTTCGGTTCGAGTTGTTG 58.798 50.000 0.00 0.00 37.14 3.33
4155 4815 1.925229 TTCGTTCGGTTCGAGTTGTT 58.075 45.000 0.00 0.00 37.14 2.83
4156 4816 1.925229 TTTCGTTCGGTTCGAGTTGT 58.075 45.000 0.00 0.00 37.14 3.32
4157 4817 3.466836 GAATTTCGTTCGGTTCGAGTTG 58.533 45.455 0.00 0.00 37.14 3.16
4158 4818 3.783111 GAATTTCGTTCGGTTCGAGTT 57.217 42.857 0.00 0.00 37.14 3.01
4168 4828 3.123959 TCCGGTTTCATCGAATTTCGTTC 59.876 43.478 17.61 0.00 41.35 3.95
4169 4829 3.068560 TCCGGTTTCATCGAATTTCGTT 58.931 40.909 17.61 7.57 41.35 3.85
4170 4830 2.414138 GTCCGGTTTCATCGAATTTCGT 59.586 45.455 17.61 3.73 41.35 3.85
4171 4831 2.534150 CGTCCGGTTTCATCGAATTTCG 60.534 50.000 12.54 12.54 42.10 3.46
4172 4832 2.669434 TCGTCCGGTTTCATCGAATTTC 59.331 45.455 0.00 0.00 0.00 2.17
4173 4833 2.690786 TCGTCCGGTTTCATCGAATTT 58.309 42.857 0.00 0.00 0.00 1.82
4174 4834 2.373540 TCGTCCGGTTTCATCGAATT 57.626 45.000 0.00 0.00 0.00 2.17
4175 4835 2.373540 TTCGTCCGGTTTCATCGAAT 57.626 45.000 0.00 0.00 36.00 3.34
4176 4836 2.151881 TTTCGTCCGGTTTCATCGAA 57.848 45.000 0.00 7.23 38.44 3.71
4177 4837 2.373540 ATTTCGTCCGGTTTCATCGA 57.626 45.000 0.00 0.00 0.00 3.59
4178 4838 3.120477 TCAAATTTCGTCCGGTTTCATCG 60.120 43.478 0.00 0.00 0.00 3.84
4179 4839 4.413495 TCAAATTTCGTCCGGTTTCATC 57.587 40.909 0.00 0.00 0.00 2.92
4180 4840 6.693315 ATATCAAATTTCGTCCGGTTTCAT 57.307 33.333 0.00 0.00 0.00 2.57
4181 4841 7.612668 TTATATCAAATTTCGTCCGGTTTCA 57.387 32.000 0.00 0.00 0.00 2.69
4182 4842 6.631636 GCTTATATCAAATTTCGTCCGGTTTC 59.368 38.462 0.00 0.00 0.00 2.78
4183 4843 6.094325 TGCTTATATCAAATTTCGTCCGGTTT 59.906 34.615 0.00 0.00 0.00 3.27
4184 4844 5.587043 TGCTTATATCAAATTTCGTCCGGTT 59.413 36.000 0.00 0.00 0.00 4.44
4185 4845 5.120399 TGCTTATATCAAATTTCGTCCGGT 58.880 37.500 0.00 0.00 0.00 5.28
4186 4846 5.666969 TGCTTATATCAAATTTCGTCCGG 57.333 39.130 0.00 0.00 0.00 5.14
4187 4847 6.079763 CCATGCTTATATCAAATTTCGTCCG 58.920 40.000 0.00 0.00 0.00 4.79
4188 4848 5.858581 GCCATGCTTATATCAAATTTCGTCC 59.141 40.000 0.00 0.00 0.00 4.79
4189 4849 5.565259 CGCCATGCTTATATCAAATTTCGTC 59.435 40.000 0.00 0.00 0.00 4.20
4190 4850 5.451908 CGCCATGCTTATATCAAATTTCGT 58.548 37.500 0.00 0.00 0.00 3.85
4191 4851 4.853196 CCGCCATGCTTATATCAAATTTCG 59.147 41.667 0.00 0.00 0.00 3.46
4192 4852 6.012658 TCCGCCATGCTTATATCAAATTTC 57.987 37.500 0.00 0.00 0.00 2.17
4193 4853 6.594788 ATCCGCCATGCTTATATCAAATTT 57.405 33.333 0.00 0.00 0.00 1.82
4194 4854 6.594788 AATCCGCCATGCTTATATCAAATT 57.405 33.333 0.00 0.00 0.00 1.82
4195 4855 6.209192 TGAAATCCGCCATGCTTATATCAAAT 59.791 34.615 0.00 0.00 0.00 2.32
4196 4856 5.534278 TGAAATCCGCCATGCTTATATCAAA 59.466 36.000 0.00 0.00 0.00 2.69
4197 4857 5.069318 TGAAATCCGCCATGCTTATATCAA 58.931 37.500 0.00 0.00 0.00 2.57
4198 4858 4.650734 TGAAATCCGCCATGCTTATATCA 58.349 39.130 0.00 0.00 0.00 2.15
4199 4859 5.824904 ATGAAATCCGCCATGCTTATATC 57.175 39.130 0.00 0.00 0.00 1.63
4200 4860 5.711506 TCAATGAAATCCGCCATGCTTATAT 59.288 36.000 0.00 0.00 0.00 0.86
4201 4861 5.069318 TCAATGAAATCCGCCATGCTTATA 58.931 37.500 0.00 0.00 0.00 0.98
4202 4862 3.890756 TCAATGAAATCCGCCATGCTTAT 59.109 39.130 0.00 0.00 0.00 1.73
4203 4863 3.286353 TCAATGAAATCCGCCATGCTTA 58.714 40.909 0.00 0.00 0.00 3.09
4204 4864 2.101783 TCAATGAAATCCGCCATGCTT 58.898 42.857 0.00 0.00 0.00 3.91
4205 4865 1.766494 TCAATGAAATCCGCCATGCT 58.234 45.000 0.00 0.00 0.00 3.79
4206 4866 2.582728 TTCAATGAAATCCGCCATGC 57.417 45.000 0.00 0.00 0.00 4.06
4207 4867 5.693104 CCTATTTTCAATGAAATCCGCCATG 59.307 40.000 9.41 0.00 31.34 3.66
4208 4868 5.598005 TCCTATTTTCAATGAAATCCGCCAT 59.402 36.000 9.41 1.79 31.34 4.40
4209 4869 4.952957 TCCTATTTTCAATGAAATCCGCCA 59.047 37.500 9.41 0.00 31.34 5.69
4210 4870 5.514274 TCCTATTTTCAATGAAATCCGCC 57.486 39.130 9.41 0.00 31.34 6.13
4211 4871 9.696917 AATTATCCTATTTTCAATGAAATCCGC 57.303 29.630 9.41 0.00 31.34 5.54
4229 4889 8.770828 CGTCCGATTTTATGTACAAATTATCCT 58.229 33.333 0.00 0.00 0.00 3.24
4230 4890 8.767085 TCGTCCGATTTTATGTACAAATTATCC 58.233 33.333 0.00 0.00 0.00 2.59
4237 4897 8.481641 CGAAATATCGTCCGATTTTATGTACAA 58.518 33.333 7.57 0.00 44.06 2.41
4238 4898 7.999213 CGAAATATCGTCCGATTTTATGTACA 58.001 34.615 7.57 0.00 44.06 2.90
4255 4915 7.904977 GGTTTTTAGTTTACCGGACGAAATATC 59.095 37.037 9.46 0.00 0.00 1.63
4256 4916 7.607607 AGGTTTTTAGTTTACCGGACGAAATAT 59.392 33.333 9.46 1.79 37.04 1.28
4257 4917 6.934083 AGGTTTTTAGTTTACCGGACGAAATA 59.066 34.615 9.46 0.00 37.04 1.40
4258 4918 5.764686 AGGTTTTTAGTTTACCGGACGAAAT 59.235 36.000 9.46 1.05 37.04 2.17
4259 4919 5.122519 AGGTTTTTAGTTTACCGGACGAAA 58.877 37.500 9.46 1.68 37.04 3.46
4260 4920 4.702831 AGGTTTTTAGTTTACCGGACGAA 58.297 39.130 9.46 0.00 37.04 3.85
4261 4921 4.335400 AGGTTTTTAGTTTACCGGACGA 57.665 40.909 9.46 0.00 37.04 4.20
4262 4922 6.538189 TTAAGGTTTTTAGTTTACCGGACG 57.462 37.500 9.46 0.00 37.04 4.79
4278 4938 9.590828 TGCTAGTTAGGGTTTTATTTTAAGGTT 57.409 29.630 0.00 0.00 0.00 3.50
4279 4939 9.763837 ATGCTAGTTAGGGTTTTATTTTAAGGT 57.236 29.630 0.00 0.00 0.00 3.50
4289 4949 8.545472 TGTGAAGTATATGCTAGTTAGGGTTTT 58.455 33.333 0.00 0.00 0.00 2.43
4290 4950 8.086143 TGTGAAGTATATGCTAGTTAGGGTTT 57.914 34.615 0.00 0.00 0.00 3.27
4291 4951 7.344871 ACTGTGAAGTATATGCTAGTTAGGGTT 59.655 37.037 0.00 0.00 0.00 4.11
4292 4952 6.839657 ACTGTGAAGTATATGCTAGTTAGGGT 59.160 38.462 0.00 0.00 0.00 4.34
4293 4953 7.014326 TCACTGTGAAGTATATGCTAGTTAGGG 59.986 40.741 8.27 0.00 0.00 3.53
4294 4954 7.863375 GTCACTGTGAAGTATATGCTAGTTAGG 59.137 40.741 12.81 0.00 0.00 2.69
4295 4955 7.863375 GGTCACTGTGAAGTATATGCTAGTTAG 59.137 40.741 12.81 0.00 0.00 2.34
4296 4956 7.560262 AGGTCACTGTGAAGTATATGCTAGTTA 59.440 37.037 12.81 0.00 0.00 2.24
4297 4957 6.381420 AGGTCACTGTGAAGTATATGCTAGTT 59.619 38.462 12.81 0.00 0.00 2.24
4298 4958 5.894393 AGGTCACTGTGAAGTATATGCTAGT 59.106 40.000 12.81 0.00 0.00 2.57
4299 4959 6.398234 AGGTCACTGTGAAGTATATGCTAG 57.602 41.667 12.81 0.00 0.00 3.42
4300 4960 5.008712 CGAGGTCACTGTGAAGTATATGCTA 59.991 44.000 12.81 0.00 0.00 3.49
4301 4961 4.202060 CGAGGTCACTGTGAAGTATATGCT 60.202 45.833 12.81 0.00 0.00 3.79
4302 4962 4.045104 CGAGGTCACTGTGAAGTATATGC 58.955 47.826 12.81 0.00 0.00 3.14
4303 4963 5.250235 ACGAGGTCACTGTGAAGTATATG 57.750 43.478 12.81 2.04 0.00 1.78
4304 4964 6.602406 ACTTACGAGGTCACTGTGAAGTATAT 59.398 38.462 12.81 0.00 0.00 0.86
4305 4965 5.942236 ACTTACGAGGTCACTGTGAAGTATA 59.058 40.000 12.81 0.00 0.00 1.47
4306 4966 4.765856 ACTTACGAGGTCACTGTGAAGTAT 59.234 41.667 12.81 0.00 0.00 2.12
4307 4967 4.139786 ACTTACGAGGTCACTGTGAAGTA 58.860 43.478 12.81 11.35 0.00 2.24
4308 4968 2.957006 ACTTACGAGGTCACTGTGAAGT 59.043 45.455 12.81 12.27 0.00 3.01
4309 4969 3.004419 TGACTTACGAGGTCACTGTGAAG 59.996 47.826 12.81 6.95 38.57 3.02
4310 4970 2.953648 TGACTTACGAGGTCACTGTGAA 59.046 45.455 12.81 0.00 38.57 3.18
4311 4971 2.578786 TGACTTACGAGGTCACTGTGA 58.421 47.619 6.36 6.36 38.57 3.58
4312 4972 3.245797 CATGACTTACGAGGTCACTGTG 58.754 50.000 0.17 0.17 44.82 3.66
4313 4973 2.352814 GCATGACTTACGAGGTCACTGT 60.353 50.000 0.00 0.00 44.82 3.55
4314 4974 2.263077 GCATGACTTACGAGGTCACTG 58.737 52.381 0.00 10.88 44.82 3.66
4315 4975 1.204941 GGCATGACTTACGAGGTCACT 59.795 52.381 0.00 0.00 44.82 3.41
4316 4976 1.067142 TGGCATGACTTACGAGGTCAC 60.067 52.381 0.00 2.34 44.82 3.67
4317 4977 1.204704 CTGGCATGACTTACGAGGTCA 59.795 52.381 0.00 10.81 45.84 4.02
4318 4978 1.471676 CCTGGCATGACTTACGAGGTC 60.472 57.143 0.00 0.00 0.00 3.85
4319 4979 0.537188 CCTGGCATGACTTACGAGGT 59.463 55.000 0.00 0.00 0.00 3.85
4320 4980 0.811616 GCCTGGCATGACTTACGAGG 60.812 60.000 15.17 0.00 0.00 4.63
4321 4981 0.176680 AGCCTGGCATGACTTACGAG 59.823 55.000 22.65 0.00 0.00 4.18
4322 4982 0.108186 CAGCCTGGCATGACTTACGA 60.108 55.000 22.65 0.00 0.00 3.43
4323 4983 1.091771 CCAGCCTGGCATGACTTACG 61.092 60.000 22.65 0.00 0.00 3.18
4324 4984 2.785868 CCAGCCTGGCATGACTTAC 58.214 57.895 22.65 0.00 0.00 2.34
4348 5008 2.851071 CGATGACGGAGGAGGAGCC 61.851 68.421 0.00 0.00 35.72 4.70
4349 5009 2.725008 CGATGACGGAGGAGGAGC 59.275 66.667 0.00 0.00 35.72 4.70
4359 5019 2.022129 GGATTAGGCGCCGATGACG 61.022 63.158 23.20 0.00 39.43 4.35
4360 5020 3.952811 GGATTAGGCGCCGATGAC 58.047 61.111 23.20 12.66 0.00 3.06
4370 5030 0.663568 GACGATGACGCCGGATTAGG 60.664 60.000 5.05 0.00 43.96 2.69
4371 5031 0.997226 CGACGATGACGCCGGATTAG 60.997 60.000 5.05 0.00 41.22 1.73
4372 5032 1.009335 CGACGATGACGCCGGATTA 60.009 57.895 5.05 0.00 41.22 1.75
4373 5033 2.278596 CGACGATGACGCCGGATT 60.279 61.111 5.05 0.00 41.22 3.01
4378 5038 2.943034 GACGACGACGATGACGCC 60.943 66.667 15.32 0.00 43.96 5.68
4379 5039 3.295462 CGACGACGACGATGACGC 61.295 66.667 15.32 0.00 43.96 5.19
4380 5040 2.643790 CCGACGACGACGATGACG 60.644 66.667 20.63 12.75 42.66 4.35
4381 5041 2.277120 CCCGACGACGACGATGAC 60.277 66.667 20.63 1.87 42.66 3.06
4382 5042 4.170062 GCCCGACGACGACGATGA 62.170 66.667 20.63 0.00 42.66 2.92
4383 5043 3.678717 AAGCCCGACGACGACGATG 62.679 63.158 20.63 12.09 42.66 3.84
4384 5044 3.392595 GAAGCCCGACGACGACGAT 62.393 63.158 20.63 4.00 42.66 3.73
4385 5045 4.093952 GAAGCCCGACGACGACGA 62.094 66.667 20.63 0.00 42.66 4.20
4399 5059 4.065281 ACCTTCCGTCGCCCGAAG 62.065 66.667 3.54 3.54 39.56 3.79
4400 5060 4.367023 CACCTTCCGTCGCCCGAA 62.367 66.667 0.00 0.00 39.56 4.30
4407 5067 3.853597 AACGCCGTCACCTTCCGTC 62.854 63.158 0.00 0.00 0.00 4.79
4408 5068 3.920196 AACGCCGTCACCTTCCGT 61.920 61.111 0.00 0.00 0.00 4.69
4409 5069 3.411351 CAACGCCGTCACCTTCCG 61.411 66.667 0.00 0.00 0.00 4.30
4410 5070 3.723348 GCAACGCCGTCACCTTCC 61.723 66.667 0.00 0.00 0.00 3.46
4411 5071 4.072088 CGCAACGCCGTCACCTTC 62.072 66.667 0.00 0.00 0.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.