Multiple sequence alignment - TraesCS1D01G193700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G193700 chr1D 100.000 3679 0 0 1 3679 269517238 269513560 0.000000e+00 6794.0
1 TraesCS1D01G193700 chr1B 95.602 2615 64 26 602 3205 369511440 369514014 0.000000e+00 4145.0
2 TraesCS1D01G193700 chr1B 82.184 522 78 14 77 592 608855410 608854898 5.640000e-118 435.0
3 TraesCS1D01G193700 chr1A 94.045 2435 67 37 791 3205 333498240 333500616 0.000000e+00 3622.0
4 TraesCS1D01G193700 chr1A 83.727 381 50 10 170 542 592847999 592847623 2.100000e-92 350.0
5 TraesCS1D01G193700 chr1A 79.263 434 54 17 282 707 333497766 333498171 1.680000e-68 270.0
6 TraesCS1D01G193700 chr4D 84.301 1223 154 25 1267 2455 497697163 497698381 0.000000e+00 1160.0
7 TraesCS1D01G193700 chr5A 84.241 1193 171 15 1276 2455 678181271 678180083 0.000000e+00 1146.0
8 TraesCS1D01G193700 chr5A 80.603 464 73 14 110 565 113165304 113164850 3.520000e-90 342.0
9 TraesCS1D01G193700 chr4B 83.663 1212 164 22 1276 2455 639011494 639010285 0.000000e+00 1110.0
10 TraesCS1D01G193700 chr4B 84.507 71 8 3 1278 1347 447770784 447770716 2.370000e-07 67.6
11 TraesCS1D01G193700 chr2A 79.316 1170 201 31 1300 2438 649484377 649485536 0.000000e+00 782.0
12 TraesCS1D01G193700 chr2A 83.217 286 42 5 3359 3641 709421229 709421511 1.310000e-64 257.0
13 TraesCS1D01G193700 chr7D 96.137 466 16 2 3215 3679 523802399 523802863 0.000000e+00 760.0
14 TraesCS1D01G193700 chr7D 86.373 477 58 7 3206 3679 107032495 107032023 7.050000e-142 514.0
15 TraesCS1D01G193700 chr2D 78.956 1169 207 29 1300 2438 503436775 503437934 0.000000e+00 760.0
16 TraesCS1D01G193700 chr2D 95.388 477 18 3 3204 3679 362311949 362311476 0.000000e+00 756.0
17 TraesCS1D01G193700 chr2D 81.132 424 56 13 155 573 75645214 75645618 5.930000e-83 318.0
18 TraesCS1D01G193700 chr2B 78.785 1169 209 29 1300 2438 591912864 591914023 0.000000e+00 749.0
19 TraesCS1D01G193700 chr6D 78.776 1013 178 31 1300 2297 341079418 341078428 0.000000e+00 645.0
20 TraesCS1D01G193700 chr6D 81.878 458 69 13 3203 3651 70637335 70637787 1.250000e-99 374.0
21 TraesCS1D01G193700 chr6D 77.088 467 81 18 3204 3651 464974368 464973909 2.840000e-61 246.0
22 TraesCS1D01G193700 chr5D 90.737 475 42 2 3206 3679 547246636 547247109 1.860000e-177 632.0
23 TraesCS1D01G193700 chr5D 83.077 455 69 7 3204 3651 398755466 398755013 1.230000e-109 407.0
24 TraesCS1D01G193700 chr4A 87.387 444 49 6 3240 3679 614606449 614606889 1.520000e-138 503.0
25 TraesCS1D01G193700 chr4A 84.507 71 8 3 1278 1347 102832939 102833007 2.370000e-07 67.6
26 TraesCS1D01G193700 chr3A 85.078 449 56 10 84 525 698026754 698027198 7.250000e-122 448.0
27 TraesCS1D01G193700 chr3A 80.471 425 76 6 3204 3624 28568417 28568838 5.930000e-83 318.0
28 TraesCS1D01G193700 chr3A 77.645 501 69 23 77 573 74217867 74218328 7.830000e-67 265.0
29 TraesCS1D01G193700 chr7A 79.463 521 76 12 84 591 77523865 77523363 1.270000e-89 340.0
30 TraesCS1D01G193700 chr5B 79.646 452 81 10 3206 3650 375453727 375453280 7.670000e-82 315.0
31 TraesCS1D01G193700 chr5B 78.867 459 77 15 3203 3651 107575165 107574717 3.590000e-75 292.0
32 TraesCS1D01G193700 chr3D 84.345 313 39 7 77 384 71376258 71375951 7.720000e-77 298.0
33 TraesCS1D01G193700 chr3D 75.195 512 69 22 87 564 582995713 582995226 4.850000e-44 189.0
34 TraesCS1D01G193700 chr7B 78.775 457 84 13 3203 3651 636751641 636751190 9.990000e-76 294.0
35 TraesCS1D01G193700 chr6B 81.614 223 38 2 354 573 629818625 629818403 8.120000e-42 182.0
36 TraesCS1D01G193700 chr6A 87.218 133 12 5 222 350 418860 418991 2.960000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G193700 chr1D 269513560 269517238 3678 True 6794 6794 100.000 1 3679 1 chr1D.!!$R1 3678
1 TraesCS1D01G193700 chr1B 369511440 369514014 2574 False 4145 4145 95.602 602 3205 1 chr1B.!!$F1 2603
2 TraesCS1D01G193700 chr1B 608854898 608855410 512 True 435 435 82.184 77 592 1 chr1B.!!$R1 515
3 TraesCS1D01G193700 chr1A 333497766 333500616 2850 False 1946 3622 86.654 282 3205 2 chr1A.!!$F1 2923
4 TraesCS1D01G193700 chr4D 497697163 497698381 1218 False 1160 1160 84.301 1267 2455 1 chr4D.!!$F1 1188
5 TraesCS1D01G193700 chr5A 678180083 678181271 1188 True 1146 1146 84.241 1276 2455 1 chr5A.!!$R2 1179
6 TraesCS1D01G193700 chr4B 639010285 639011494 1209 True 1110 1110 83.663 1276 2455 1 chr4B.!!$R2 1179
7 TraesCS1D01G193700 chr2A 649484377 649485536 1159 False 782 782 79.316 1300 2438 1 chr2A.!!$F1 1138
8 TraesCS1D01G193700 chr2D 503436775 503437934 1159 False 760 760 78.956 1300 2438 1 chr2D.!!$F2 1138
9 TraesCS1D01G193700 chr2B 591912864 591914023 1159 False 749 749 78.785 1300 2438 1 chr2B.!!$F1 1138
10 TraesCS1D01G193700 chr6D 341078428 341079418 990 True 645 645 78.776 1300 2297 1 chr6D.!!$R1 997
11 TraesCS1D01G193700 chr7A 77523363 77523865 502 True 340 340 79.463 84 591 1 chr7A.!!$R1 507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
743 762 0.249955 TGCATGCGAGTTCATCTCCA 59.750 50.000 14.09 0.0 39.84 3.86 F
848 888 3.361977 GCCGGCACAAATGTCCGT 61.362 61.111 24.80 0.0 41.25 4.69 F
1599 1644 2.660206 CGGTGGTTCGTCATGGGA 59.340 61.111 0.00 0.0 0.00 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1599 1644 1.009222 GAACACCGTGTCGTCGTCT 60.009 57.895 4.23 0.0 0.00 4.18 R
1656 1701 1.210931 GTAGTACGGCTGCGTGTGA 59.789 57.895 6.44 0.0 0.00 3.58 R
3429 3549 0.100682 GCAGATCAAGCTGTGCATGG 59.899 55.000 0.00 0.0 38.17 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.053978 GGACAAAGGATGGATGGATTAGT 57.946 43.478 0.00 0.00 0.00 2.24
23 24 6.187727 GGACAAAGGATGGATGGATTAGTA 57.812 41.667 0.00 0.00 0.00 1.82
24 25 6.234177 GGACAAAGGATGGATGGATTAGTAG 58.766 44.000 0.00 0.00 0.00 2.57
25 26 6.192970 ACAAAGGATGGATGGATTAGTAGG 57.807 41.667 0.00 0.00 0.00 3.18
26 27 5.672194 ACAAAGGATGGATGGATTAGTAGGT 59.328 40.000 0.00 0.00 0.00 3.08
27 28 5.832539 AAGGATGGATGGATTAGTAGGTG 57.167 43.478 0.00 0.00 0.00 4.00
28 29 5.093236 AGGATGGATGGATTAGTAGGTGA 57.907 43.478 0.00 0.00 0.00 4.02
29 30 5.476983 AGGATGGATGGATTAGTAGGTGAA 58.523 41.667 0.00 0.00 0.00 3.18
30 31 5.308237 AGGATGGATGGATTAGTAGGTGAAC 59.692 44.000 0.00 0.00 0.00 3.18
31 32 5.308237 GGATGGATGGATTAGTAGGTGAACT 59.692 44.000 0.00 0.00 0.00 3.01
32 33 6.497259 GGATGGATGGATTAGTAGGTGAACTA 59.503 42.308 0.00 0.00 0.00 2.24
33 34 6.978674 TGGATGGATTAGTAGGTGAACTAG 57.021 41.667 0.00 0.00 33.62 2.57
34 35 5.304614 TGGATGGATTAGTAGGTGAACTAGC 59.695 44.000 0.00 0.00 33.62 3.42
35 36 5.540719 GGATGGATTAGTAGGTGAACTAGCT 59.459 44.000 0.00 0.00 40.87 3.32
36 37 5.854010 TGGATTAGTAGGTGAACTAGCTG 57.146 43.478 0.00 0.00 37.75 4.24
37 38 4.649674 TGGATTAGTAGGTGAACTAGCTGG 59.350 45.833 0.00 0.00 37.75 4.85
38 39 4.894114 GGATTAGTAGGTGAACTAGCTGGA 59.106 45.833 3.17 0.00 37.75 3.86
39 40 5.363005 GGATTAGTAGGTGAACTAGCTGGAA 59.637 44.000 3.17 0.00 37.75 3.53
40 41 6.127140 GGATTAGTAGGTGAACTAGCTGGAAA 60.127 42.308 3.17 0.00 37.75 3.13
41 42 6.675413 TTAGTAGGTGAACTAGCTGGAAAA 57.325 37.500 3.17 0.00 37.75 2.29
42 43 5.562298 AGTAGGTGAACTAGCTGGAAAAA 57.438 39.130 3.17 0.00 37.75 1.94
68 69 9.710900 AACCATGTATTTCTTGAAAGGAATTTC 57.289 29.630 1.95 0.00 35.81 2.17
69 70 8.869109 ACCATGTATTTCTTGAAAGGAATTTCA 58.131 29.630 1.95 0.00 35.81 2.69
70 71 9.362539 CCATGTATTTCTTGAAAGGAATTTCAG 57.637 33.333 1.95 0.49 41.38 3.02
71 72 9.362539 CATGTATTTCTTGAAAGGAATTTCAGG 57.637 33.333 1.95 6.52 41.38 3.86
72 73 8.704849 TGTATTTCTTGAAAGGAATTTCAGGA 57.295 30.769 10.40 10.40 42.68 3.86
73 74 8.576442 TGTATTTCTTGAAAGGAATTTCAGGAC 58.424 33.333 13.14 5.63 43.59 3.85
74 75 7.601705 ATTTCTTGAAAGGAATTTCAGGACA 57.398 32.000 13.14 8.88 43.59 4.02
75 76 6.391227 TTCTTGAAAGGAATTTCAGGACAC 57.609 37.500 13.14 0.00 43.59 3.67
92 93 3.486383 GACACACCCTGGATTTCTTGAA 58.514 45.455 0.00 0.00 0.00 2.69
100 101 4.142227 CCCTGGATTTCTTGAAGATTGCTG 60.142 45.833 0.00 0.00 0.00 4.41
104 105 2.291209 TTCTTGAAGATTGCTGCCCA 57.709 45.000 0.00 0.00 0.00 5.36
106 107 2.596346 TCTTGAAGATTGCTGCCCAAA 58.404 42.857 0.00 0.00 36.92 3.28
122 123 5.200483 TGCCCAAAGAAAAGAGAAGAGAAA 58.800 37.500 0.00 0.00 0.00 2.52
129 130 5.870706 AGAAAAGAGAAGAGAAAACCCGAT 58.129 37.500 0.00 0.00 0.00 4.18
164 165 2.813754 TGCATGAAAAAGAGAAGACCCG 59.186 45.455 0.00 0.00 0.00 5.28
178 179 3.834799 CCCGGCTCACTCCCGTAC 61.835 72.222 0.00 0.00 44.13 3.67
203 204 6.590234 ATGAAACTTCACACCTTAAATCCC 57.410 37.500 0.00 0.00 40.49 3.85
206 207 4.302559 ACTTCACACCTTAAATCCCCTC 57.697 45.455 0.00 0.00 0.00 4.30
214 215 5.133221 CACCTTAAATCCCCTCGATCAATT 58.867 41.667 0.00 0.00 0.00 2.32
219 220 4.682778 AATCCCCTCGATCAATTAACGA 57.317 40.909 0.00 0.00 34.90 3.85
220 221 4.682778 ATCCCCTCGATCAATTAACGAA 57.317 40.909 0.00 0.00 35.70 3.85
249 250 5.251601 AGCAGAGTAGAATTAACTCCGTC 57.748 43.478 14.03 6.49 43.64 4.79
265 269 2.233676 TCCGTCGTACTATATCGGGCTA 59.766 50.000 0.00 0.00 41.27 3.93
280 284 3.709653 TCGGGCTAGTACATGGAAAAGAT 59.290 43.478 0.00 0.00 0.00 2.40
342 346 8.268850 TCTTAAAAATCTCCTCGAATGAAAGG 57.731 34.615 0.00 0.00 0.00 3.11
373 379 4.764050 TGAATAATTCACGGGCCTTCTA 57.236 40.909 0.84 0.00 34.08 2.10
377 383 1.213296 ATTCACGGGCCTTCTATGGT 58.787 50.000 0.84 0.00 0.00 3.55
397 403 3.364964 GGTGTGCGATGACCTAACAAAAG 60.365 47.826 0.00 0.00 0.00 2.27
467 475 2.668550 GCGGCGAAACCCAGAACT 60.669 61.111 12.98 0.00 33.26 3.01
476 484 5.286438 GCGAAACCCAGAACTTAAATGTTT 58.714 37.500 0.00 0.00 0.00 2.83
480 488 7.704899 CGAAACCCAGAACTTAAATGTTTCTTT 59.295 33.333 0.00 0.00 38.46 2.52
519 535 5.157781 GGTTTTGCTTGCACGTATAATTCA 58.842 37.500 0.00 0.00 0.00 2.57
551 568 9.988350 AATTTAAATGCACACTACTTATTCTCG 57.012 29.630 0.39 0.00 0.00 4.04
573 590 2.580589 GTTGCAACGCACGAACATATT 58.419 42.857 14.90 0.00 38.71 1.28
574 591 3.722374 CGTTGCAACGCACGAACATATTA 60.722 43.478 35.89 0.00 46.06 0.98
575 592 4.339429 GTTGCAACGCACGAACATATTAT 58.661 39.130 14.90 0.00 38.71 1.28
576 593 5.494618 GTTGCAACGCACGAACATATTATA 58.505 37.500 14.90 0.00 38.71 0.98
577 594 5.073192 TGCAACGCACGAACATATTATAC 57.927 39.130 0.00 0.00 31.71 1.47
578 595 4.025563 TGCAACGCACGAACATATTATACC 60.026 41.667 0.00 0.00 31.71 2.73
579 596 4.025563 GCAACGCACGAACATATTATACCA 60.026 41.667 0.00 0.00 0.00 3.25
580 597 5.666203 CAACGCACGAACATATTATACCAG 58.334 41.667 0.00 0.00 0.00 4.00
581 598 4.940463 ACGCACGAACATATTATACCAGT 58.060 39.130 0.00 0.00 0.00 4.00
582 599 4.980434 ACGCACGAACATATTATACCAGTC 59.020 41.667 0.00 0.00 0.00 3.51
583 600 4.384846 CGCACGAACATATTATACCAGTCC 59.615 45.833 0.00 0.00 0.00 3.85
584 601 5.539048 GCACGAACATATTATACCAGTCCT 58.461 41.667 0.00 0.00 0.00 3.85
585 602 5.989777 GCACGAACATATTATACCAGTCCTT 59.010 40.000 0.00 0.00 0.00 3.36
586 603 6.482308 GCACGAACATATTATACCAGTCCTTT 59.518 38.462 0.00 0.00 0.00 3.11
587 604 7.654520 GCACGAACATATTATACCAGTCCTTTA 59.345 37.037 0.00 0.00 0.00 1.85
588 605 9.706691 CACGAACATATTATACCAGTCCTTTAT 57.293 33.333 0.00 0.00 0.00 1.40
596 613 8.919777 ATTATACCAGTCCTTTATAAAGCACC 57.080 34.615 18.18 8.74 34.69 5.01
699 718 0.596082 AGTGCACAAAATACGCCCAC 59.404 50.000 21.04 0.00 0.00 4.61
740 759 1.134310 TCCATGCATGCGAGTTCATCT 60.134 47.619 21.69 0.00 0.00 2.90
743 762 0.249955 TGCATGCGAGTTCATCTCCA 59.750 50.000 14.09 0.00 39.84 3.86
845 885 4.776647 GGCGCCGGCACAAATGTC 62.777 66.667 28.98 6.40 42.47 3.06
846 886 4.776647 GCGCCGGCACAAATGTCC 62.777 66.667 28.98 0.00 39.62 4.02
847 887 4.459331 CGCCGGCACAAATGTCCG 62.459 66.667 28.98 13.80 41.98 4.79
848 888 3.361977 GCCGGCACAAATGTCCGT 61.362 61.111 24.80 0.00 41.25 4.69
895 935 3.414136 AACGCACACCTGCCCTTCA 62.414 57.895 0.00 0.00 40.73 3.02
1599 1644 2.660206 CGGTGGTTCGTCATGGGA 59.340 61.111 0.00 0.00 0.00 4.37
2556 2665 1.636988 GAGTTCATTGCTGCCATTGC 58.363 50.000 0.00 0.00 38.26 3.56
2595 2704 1.888512 GGAGAAATTGCTGCAAGGTGA 59.111 47.619 20.72 0.00 0.00 4.02
2597 2706 3.696051 GGAGAAATTGCTGCAAGGTGATA 59.304 43.478 20.72 0.00 0.00 2.15
2686 2795 4.265904 TCGCCAAGATTTAACTGACTGA 57.734 40.909 0.00 0.00 0.00 3.41
2695 2804 4.360951 TTTAACTGACTGACCGGGATTT 57.639 40.909 6.32 0.00 0.00 2.17
2710 2819 0.244721 GATTTGGTTGGTGCTCTGCC 59.755 55.000 0.00 0.00 0.00 4.85
2742 2857 7.275183 AGTTAGCTTCATATTCTGCATGTACA 58.725 34.615 0.00 0.00 0.00 2.90
2788 2906 1.601419 GCTTGTGCATGCAGTGGGAT 61.601 55.000 23.41 0.00 39.41 3.85
2790 2908 1.274167 CTTGTGCATGCAGTGGGATTT 59.726 47.619 23.41 0.00 0.00 2.17
2833 2951 1.805945 GATAGCGGCGGCGGAATAG 60.806 63.158 33.02 3.96 46.35 1.73
2882 3000 4.401925 GCCCAGCCAAGATTATTACTCAT 58.598 43.478 0.00 0.00 0.00 2.90
2957 3076 4.570663 CTGTCGATCCGCCGGGTC 62.571 72.222 6.26 6.26 33.83 4.46
3108 3228 4.141287 TGTGCTTTTGGTGTAAGCTATGT 58.859 39.130 8.78 0.00 46.30 2.29
3205 3325 2.568623 AGGACCGCACAAAGAGATTT 57.431 45.000 0.00 0.00 0.00 2.17
3206 3326 2.863809 AGGACCGCACAAAGAGATTTT 58.136 42.857 0.00 0.00 0.00 1.82
3207 3327 3.222603 AGGACCGCACAAAGAGATTTTT 58.777 40.909 0.00 0.00 0.00 1.94
3240 3360 4.041917 ACGTCGCGTCCGGCTTTA 62.042 61.111 20.97 0.00 40.44 1.85
3241 3361 2.806198 CGTCGCGTCCGGCTTTAA 60.806 61.111 5.77 0.00 40.44 1.52
3242 3362 2.374226 CGTCGCGTCCGGCTTTAAA 61.374 57.895 5.77 0.00 40.44 1.52
3243 3363 1.689352 CGTCGCGTCCGGCTTTAAAT 61.689 55.000 5.77 0.00 40.44 1.40
3244 3364 0.445043 GTCGCGTCCGGCTTTAAATT 59.555 50.000 5.77 0.00 40.44 1.82
3245 3365 1.660104 GTCGCGTCCGGCTTTAAATTA 59.340 47.619 5.77 0.00 40.44 1.40
3246 3366 2.094099 GTCGCGTCCGGCTTTAAATTAA 59.906 45.455 5.77 0.00 40.44 1.40
3247 3367 2.937799 TCGCGTCCGGCTTTAAATTAAT 59.062 40.909 5.77 0.00 40.44 1.40
3248 3368 4.025813 GTCGCGTCCGGCTTTAAATTAATA 60.026 41.667 5.77 0.00 40.44 0.98
3249 3369 4.569966 TCGCGTCCGGCTTTAAATTAATAA 59.430 37.500 5.77 0.00 40.44 1.40
3250 3370 5.064452 TCGCGTCCGGCTTTAAATTAATAAA 59.936 36.000 5.77 0.00 40.44 1.40
3251 3371 5.394322 CGCGTCCGGCTTTAAATTAATAAAG 59.606 40.000 0.00 6.41 42.93 1.85
3270 3390 4.113815 CCCAAGGCGGCATCCAGA 62.114 66.667 13.08 0.00 0.00 3.86
3271 3391 2.825836 CCAAGGCGGCATCCAGAC 60.826 66.667 13.08 0.00 0.00 3.51
3272 3392 2.046023 CAAGGCGGCATCCAGACA 60.046 61.111 13.08 0.00 0.00 3.41
3273 3393 1.675310 CAAGGCGGCATCCAGACAA 60.675 57.895 13.08 0.00 0.00 3.18
3274 3394 1.377725 AAGGCGGCATCCAGACAAG 60.378 57.895 13.08 0.00 0.00 3.16
3275 3395 2.825836 GGCGGCATCCAGACAAGG 60.826 66.667 3.07 0.00 0.00 3.61
3276 3396 2.045926 GCGGCATCCAGACAAGGT 60.046 61.111 0.00 0.00 0.00 3.50
3277 3397 1.220749 GCGGCATCCAGACAAGGTA 59.779 57.895 0.00 0.00 0.00 3.08
3278 3398 0.179045 GCGGCATCCAGACAAGGTAT 60.179 55.000 0.00 0.00 0.00 2.73
3279 3399 1.871080 CGGCATCCAGACAAGGTATC 58.129 55.000 0.00 0.00 0.00 2.24
3280 3400 1.138859 CGGCATCCAGACAAGGTATCA 59.861 52.381 0.00 0.00 0.00 2.15
3281 3401 2.419990 CGGCATCCAGACAAGGTATCAA 60.420 50.000 0.00 0.00 0.00 2.57
3282 3402 2.945668 GGCATCCAGACAAGGTATCAAC 59.054 50.000 0.00 0.00 0.00 3.18
3283 3403 2.609459 GCATCCAGACAAGGTATCAACG 59.391 50.000 0.00 0.00 0.00 4.10
3284 3404 3.861840 CATCCAGACAAGGTATCAACGT 58.138 45.455 0.00 0.00 0.00 3.99
3285 3405 4.253685 CATCCAGACAAGGTATCAACGTT 58.746 43.478 0.00 0.00 34.10 3.99
3286 3406 5.416083 CATCCAGACAAGGTATCAACGTTA 58.584 41.667 0.00 0.00 32.61 3.18
3287 3407 4.813027 TCCAGACAAGGTATCAACGTTAC 58.187 43.478 0.00 0.00 32.61 2.50
3288 3408 4.281435 TCCAGACAAGGTATCAACGTTACA 59.719 41.667 0.00 0.00 32.61 2.41
3289 3409 4.992319 CCAGACAAGGTATCAACGTTACAA 59.008 41.667 0.00 0.00 32.61 2.41
3290 3410 5.107220 CCAGACAAGGTATCAACGTTACAAC 60.107 44.000 0.00 0.00 32.61 3.32
3291 3411 4.992951 AGACAAGGTATCAACGTTACAACC 59.007 41.667 14.21 14.21 32.61 3.77
3292 3412 4.067192 ACAAGGTATCAACGTTACAACCC 58.933 43.478 17.01 7.88 32.61 4.11
3293 3413 4.066490 CAAGGTATCAACGTTACAACCCA 58.934 43.478 17.01 0.00 32.61 4.51
3294 3414 3.667360 AGGTATCAACGTTACAACCCAC 58.333 45.455 17.01 3.64 0.00 4.61
3295 3415 2.743664 GGTATCAACGTTACAACCCACC 59.256 50.000 0.00 0.00 0.00 4.61
3296 3416 2.943036 ATCAACGTTACAACCCACCT 57.057 45.000 0.00 0.00 0.00 4.00
3297 3417 2.713863 TCAACGTTACAACCCACCTT 57.286 45.000 0.00 0.00 0.00 3.50
3298 3418 3.834489 TCAACGTTACAACCCACCTTA 57.166 42.857 0.00 0.00 0.00 2.69
3299 3419 4.148128 TCAACGTTACAACCCACCTTAA 57.852 40.909 0.00 0.00 0.00 1.85
3300 3420 4.521146 TCAACGTTACAACCCACCTTAAA 58.479 39.130 0.00 0.00 0.00 1.52
3301 3421 4.946157 TCAACGTTACAACCCACCTTAAAA 59.054 37.500 0.00 0.00 0.00 1.52
3302 3422 5.066246 TCAACGTTACAACCCACCTTAAAAG 59.934 40.000 0.00 0.00 0.00 2.27
3314 3434 2.889512 CCTTAAAAGGTTCCTTGGGCT 58.110 47.619 4.77 0.00 41.41 5.19
3315 3435 2.826128 CCTTAAAAGGTTCCTTGGGCTC 59.174 50.000 4.77 0.00 41.41 4.70
3316 3436 2.194201 TAAAAGGTTCCTTGGGCTCG 57.806 50.000 4.77 0.00 0.00 5.03
3317 3437 1.179174 AAAAGGTTCCTTGGGCTCGC 61.179 55.000 4.77 0.00 0.00 5.03
3318 3438 2.351924 AAAGGTTCCTTGGGCTCGCA 62.352 55.000 4.77 0.00 0.00 5.10
3319 3439 2.747855 GGTTCCTTGGGCTCGCAG 60.748 66.667 0.00 0.00 0.00 5.18
3320 3440 2.747855 GTTCCTTGGGCTCGCAGG 60.748 66.667 0.00 0.00 0.00 4.85
3321 3441 4.722700 TTCCTTGGGCTCGCAGGC 62.723 66.667 0.00 1.84 40.51 4.85
3334 3454 4.767255 CAGGCCCGGCACTGAGAC 62.767 72.222 18.26 0.00 36.86 3.36
3336 3456 4.767255 GGCCCGGCACTGAGACAG 62.767 72.222 12.58 0.00 37.52 3.51
3337 3457 4.008933 GCCCGGCACTGAGACAGT 62.009 66.667 3.91 0.00 46.51 3.55
3338 3458 2.743718 CCCGGCACTGAGACAGTT 59.256 61.111 0.00 0.00 42.59 3.16
3339 3459 1.374758 CCCGGCACTGAGACAGTTC 60.375 63.158 0.00 0.00 42.59 3.01
3340 3460 1.367471 CCGGCACTGAGACAGTTCA 59.633 57.895 1.46 0.00 42.59 3.18
3341 3461 0.249868 CCGGCACTGAGACAGTTCAA 60.250 55.000 1.46 0.00 42.59 2.69
3342 3462 1.581934 CGGCACTGAGACAGTTCAAA 58.418 50.000 1.46 0.00 42.59 2.69
3343 3463 1.528586 CGGCACTGAGACAGTTCAAAG 59.471 52.381 1.46 0.00 42.59 2.77
3344 3464 2.803133 CGGCACTGAGACAGTTCAAAGA 60.803 50.000 1.46 0.00 42.59 2.52
3345 3465 2.545946 GGCACTGAGACAGTTCAAAGAC 59.454 50.000 1.46 0.00 42.59 3.01
3346 3466 3.198068 GCACTGAGACAGTTCAAAGACA 58.802 45.455 1.46 0.00 42.59 3.41
3347 3467 3.812053 GCACTGAGACAGTTCAAAGACAT 59.188 43.478 1.46 0.00 42.59 3.06
3348 3468 4.274459 GCACTGAGACAGTTCAAAGACATT 59.726 41.667 1.46 0.00 42.59 2.71
3349 3469 5.466728 GCACTGAGACAGTTCAAAGACATTA 59.533 40.000 1.46 0.00 42.59 1.90
3350 3470 6.017934 GCACTGAGACAGTTCAAAGACATTAA 60.018 38.462 1.46 0.00 42.59 1.40
3351 3471 7.348201 CACTGAGACAGTTCAAAGACATTAAC 58.652 38.462 1.46 0.00 42.59 2.01
3352 3472 7.225538 CACTGAGACAGTTCAAAGACATTAACT 59.774 37.037 1.46 0.00 42.59 2.24
3353 3473 8.421784 ACTGAGACAGTTCAAAGACATTAACTA 58.578 33.333 0.00 0.00 42.59 2.24
3354 3474 9.261180 CTGAGACAGTTCAAAGACATTAACTAA 57.739 33.333 0.00 0.00 31.20 2.24
3355 3475 9.042008 TGAGACAGTTCAAAGACATTAACTAAC 57.958 33.333 0.00 0.00 31.20 2.34
3356 3476 8.958119 AGACAGTTCAAAGACATTAACTAACA 57.042 30.769 0.00 0.00 31.20 2.41
3357 3477 8.827677 AGACAGTTCAAAGACATTAACTAACAC 58.172 33.333 0.00 0.00 31.20 3.32
3358 3478 8.500753 ACAGTTCAAAGACATTAACTAACACA 57.499 30.769 0.00 0.00 31.20 3.72
3359 3479 8.395633 ACAGTTCAAAGACATTAACTAACACAC 58.604 33.333 0.00 0.00 31.20 3.82
3360 3480 8.394877 CAGTTCAAAGACATTAACTAACACACA 58.605 33.333 0.00 0.00 31.20 3.72
3361 3481 8.952278 AGTTCAAAGACATTAACTAACACACAA 58.048 29.630 0.00 0.00 30.62 3.33
3362 3482 9.562583 GTTCAAAGACATTAACTAACACACAAA 57.437 29.630 0.00 0.00 0.00 2.83
3364 3484 9.781834 TCAAAGACATTAACTAACACACAAAAG 57.218 29.630 0.00 0.00 0.00 2.27
3365 3485 8.531530 CAAAGACATTAACTAACACACAAAAGC 58.468 33.333 0.00 0.00 0.00 3.51
3366 3486 6.427150 AGACATTAACTAACACACAAAAGCG 58.573 36.000 0.00 0.00 0.00 4.68
3367 3487 5.516090 ACATTAACTAACACACAAAAGCGG 58.484 37.500 0.00 0.00 0.00 5.52
3368 3488 5.297278 ACATTAACTAACACACAAAAGCGGA 59.703 36.000 0.00 0.00 0.00 5.54
3369 3489 3.963383 AACTAACACACAAAAGCGGAG 57.037 42.857 0.00 0.00 0.00 4.63
3382 3502 4.386245 CGGAGCGAGACAAGTAGC 57.614 61.111 0.00 0.00 0.00 3.58
3383 3503 1.803943 CGGAGCGAGACAAGTAGCT 59.196 57.895 0.00 0.00 43.33 3.32
3387 3507 2.355717 AGCGAGACAAGTAGCTCAAC 57.644 50.000 0.00 0.00 34.48 3.18
3388 3508 0.985549 GCGAGACAAGTAGCTCAACG 59.014 55.000 0.00 0.00 0.00 4.10
3389 3509 0.985549 CGAGACAAGTAGCTCAACGC 59.014 55.000 0.00 0.00 39.57 4.84
3390 3510 1.666023 CGAGACAAGTAGCTCAACGCA 60.666 52.381 0.00 0.00 42.61 5.24
3391 3511 2.404215 GAGACAAGTAGCTCAACGCAA 58.596 47.619 0.00 0.00 42.61 4.85
3392 3512 2.800544 GAGACAAGTAGCTCAACGCAAA 59.199 45.455 0.00 0.00 42.61 3.68
3393 3513 3.202906 AGACAAGTAGCTCAACGCAAAA 58.797 40.909 0.00 0.00 42.61 2.44
3394 3514 3.815401 AGACAAGTAGCTCAACGCAAAAT 59.185 39.130 0.00 0.00 42.61 1.82
3395 3515 4.994852 AGACAAGTAGCTCAACGCAAAATA 59.005 37.500 0.00 0.00 42.61 1.40
3396 3516 5.030874 ACAAGTAGCTCAACGCAAAATAC 57.969 39.130 0.00 0.00 42.61 1.89
3397 3517 4.755123 ACAAGTAGCTCAACGCAAAATACT 59.245 37.500 0.00 0.00 42.61 2.12
3398 3518 5.107065 ACAAGTAGCTCAACGCAAAATACTC 60.107 40.000 0.00 0.00 42.61 2.59
3399 3519 4.566004 AGTAGCTCAACGCAAAATACTCA 58.434 39.130 0.00 0.00 42.61 3.41
3400 3520 4.994852 AGTAGCTCAACGCAAAATACTCAA 59.005 37.500 0.00 0.00 42.61 3.02
3401 3521 4.410492 AGCTCAACGCAAAATACTCAAG 57.590 40.909 0.00 0.00 42.61 3.02
3402 3522 2.911102 GCTCAACGCAAAATACTCAAGC 59.089 45.455 0.00 0.00 38.92 4.01
3403 3523 3.365364 GCTCAACGCAAAATACTCAAGCT 60.365 43.478 0.00 0.00 38.92 3.74
3404 3524 4.145876 TCAACGCAAAATACTCAAGCTG 57.854 40.909 0.00 0.00 0.00 4.24
3405 3525 3.058293 TCAACGCAAAATACTCAAGCTGG 60.058 43.478 0.00 0.00 0.00 4.85
3406 3526 2.778299 ACGCAAAATACTCAAGCTGGA 58.222 42.857 0.00 0.00 0.00 3.86
3407 3527 3.347216 ACGCAAAATACTCAAGCTGGAT 58.653 40.909 0.00 0.00 0.00 3.41
3408 3528 3.127548 ACGCAAAATACTCAAGCTGGATG 59.872 43.478 0.00 0.00 0.00 3.51
3409 3529 3.127548 CGCAAAATACTCAAGCTGGATGT 59.872 43.478 0.00 0.00 0.00 3.06
3410 3530 4.379813 CGCAAAATACTCAAGCTGGATGTT 60.380 41.667 0.00 0.00 0.00 2.71
3411 3531 5.098211 GCAAAATACTCAAGCTGGATGTTC 58.902 41.667 0.00 0.00 0.00 3.18
3412 3532 5.105997 GCAAAATACTCAAGCTGGATGTTCT 60.106 40.000 0.00 0.00 0.00 3.01
3413 3533 6.571150 GCAAAATACTCAAGCTGGATGTTCTT 60.571 38.462 0.00 0.00 0.00 2.52
3414 3534 6.749923 AAATACTCAAGCTGGATGTTCTTC 57.250 37.500 0.00 0.00 0.00 2.87
3415 3535 3.064900 ACTCAAGCTGGATGTTCTTCC 57.935 47.619 0.00 0.00 36.24 3.46
3416 3536 2.641815 ACTCAAGCTGGATGTTCTTCCT 59.358 45.455 0.00 0.00 36.68 3.36
3417 3537 3.008330 CTCAAGCTGGATGTTCTTCCTG 58.992 50.000 0.00 6.73 36.68 3.86
3420 3540 2.772739 CTGGATGTTCTTCCTGCCG 58.227 57.895 6.36 0.00 36.68 5.69
3421 3541 1.372087 CTGGATGTTCTTCCTGCCGC 61.372 60.000 6.36 0.00 36.68 6.53
3422 3542 2.464459 GGATGTTCTTCCTGCCGCG 61.464 63.158 0.00 0.00 32.68 6.46
3423 3543 3.100862 GATGTTCTTCCTGCCGCGC 62.101 63.158 0.00 0.00 0.00 6.86
3424 3544 3.612247 ATGTTCTTCCTGCCGCGCT 62.612 57.895 5.56 0.00 0.00 5.92
3425 3545 3.050275 GTTCTTCCTGCCGCGCTT 61.050 61.111 5.56 0.00 0.00 4.68
3426 3546 2.281484 TTCTTCCTGCCGCGCTTT 60.281 55.556 5.56 0.00 0.00 3.51
3427 3547 2.325082 TTCTTCCTGCCGCGCTTTC 61.325 57.895 5.56 0.00 0.00 2.62
3428 3548 3.049674 CTTCCTGCCGCGCTTTCA 61.050 61.111 5.56 0.00 0.00 2.69
3429 3549 3.314388 CTTCCTGCCGCGCTTTCAC 62.314 63.158 5.56 0.00 0.00 3.18
3432 3552 3.434319 CTGCCGCGCTTTCACCAT 61.434 61.111 5.56 0.00 0.00 3.55
3433 3553 3.672255 CTGCCGCGCTTTCACCATG 62.672 63.158 5.56 0.00 0.00 3.66
3435 3555 3.736100 CCGCGCTTTCACCATGCA 61.736 61.111 5.56 0.00 0.00 3.96
3436 3556 2.502510 CGCGCTTTCACCATGCAC 60.503 61.111 5.56 0.00 0.00 4.57
3437 3557 2.644418 GCGCTTTCACCATGCACA 59.356 55.556 0.00 0.00 0.00 4.57
3438 3558 1.443194 GCGCTTTCACCATGCACAG 60.443 57.895 0.00 0.00 0.00 3.66
3439 3559 1.443194 CGCTTTCACCATGCACAGC 60.443 57.895 0.00 0.00 0.00 4.40
3440 3560 1.859427 CGCTTTCACCATGCACAGCT 61.859 55.000 0.00 0.00 0.00 4.24
3441 3561 0.316204 GCTTTCACCATGCACAGCTT 59.684 50.000 0.00 0.00 0.00 3.74
3442 3562 1.933500 GCTTTCACCATGCACAGCTTG 60.934 52.381 0.00 0.00 34.20 4.01
3443 3563 1.610038 CTTTCACCATGCACAGCTTGA 59.390 47.619 6.47 0.00 36.06 3.02
3444 3564 1.913778 TTCACCATGCACAGCTTGAT 58.086 45.000 6.47 0.00 36.06 2.57
3445 3565 1.456296 TCACCATGCACAGCTTGATC 58.544 50.000 6.47 0.00 36.06 2.92
3446 3566 1.003928 TCACCATGCACAGCTTGATCT 59.996 47.619 6.47 0.00 36.06 2.75
3447 3567 1.132453 CACCATGCACAGCTTGATCTG 59.868 52.381 6.47 0.00 36.06 2.90
3448 3568 0.100682 CCATGCACAGCTTGATCTGC 59.899 55.000 6.47 0.00 36.06 4.26
3449 3569 1.095600 CATGCACAGCTTGATCTGCT 58.904 50.000 7.76 7.76 42.06 4.24
3450 3570 1.064208 CATGCACAGCTTGATCTGCTC 59.936 52.381 10.13 2.41 38.92 4.26
3451 3571 0.675837 TGCACAGCTTGATCTGCTCC 60.676 55.000 10.13 4.37 38.92 4.70
3452 3572 0.675837 GCACAGCTTGATCTGCTCCA 60.676 55.000 10.13 0.00 38.92 3.86
3453 3573 2.017623 GCACAGCTTGATCTGCTCCAT 61.018 52.381 10.13 0.00 38.92 3.41
3454 3574 1.671328 CACAGCTTGATCTGCTCCATG 59.329 52.381 10.13 6.58 38.92 3.66
3455 3575 1.558294 ACAGCTTGATCTGCTCCATGA 59.442 47.619 10.13 0.00 38.92 3.07
3456 3576 2.172930 ACAGCTTGATCTGCTCCATGAT 59.827 45.455 10.13 0.00 38.92 2.45
3457 3577 2.809119 CAGCTTGATCTGCTCCATGATC 59.191 50.000 10.13 0.00 38.92 2.92
3458 3578 2.152830 GCTTGATCTGCTCCATGATCC 58.847 52.381 0.00 0.00 38.53 3.36
3459 3579 2.224572 GCTTGATCTGCTCCATGATCCT 60.225 50.000 0.00 0.00 38.53 3.24
3460 3580 3.403968 CTTGATCTGCTCCATGATCCTG 58.596 50.000 0.00 0.00 38.53 3.86
3461 3581 1.697982 TGATCTGCTCCATGATCCTGG 59.302 52.381 10.60 10.60 38.53 4.45
3462 3582 1.698532 GATCTGCTCCATGATCCTGGT 59.301 52.381 15.71 0.00 37.57 4.00
3463 3583 1.126488 TCTGCTCCATGATCCTGGTC 58.874 55.000 15.71 10.03 37.57 4.02
3464 3584 0.835276 CTGCTCCATGATCCTGGTCA 59.165 55.000 15.71 13.36 37.57 4.02
3465 3585 1.420514 CTGCTCCATGATCCTGGTCAT 59.579 52.381 15.71 6.10 39.34 3.06
3469 3589 2.625375 CATGATCCTGGTCATGCGG 58.375 57.895 19.23 4.51 46.17 5.69
3470 3590 0.179037 CATGATCCTGGTCATGCGGT 60.179 55.000 19.23 0.00 46.17 5.68
3471 3591 0.107456 ATGATCCTGGTCATGCGGTC 59.893 55.000 9.88 0.00 37.44 4.79
3472 3592 1.227674 GATCCTGGTCATGCGGTCC 60.228 63.158 0.00 0.00 0.00 4.46
3473 3593 1.690219 GATCCTGGTCATGCGGTCCT 61.690 60.000 0.00 0.00 0.00 3.85
3474 3594 1.690219 ATCCTGGTCATGCGGTCCTC 61.690 60.000 0.00 0.00 0.00 3.71
3475 3595 2.659063 CCTGGTCATGCGGTCCTCA 61.659 63.158 0.00 0.00 0.00 3.86
3476 3596 1.524002 CTGGTCATGCGGTCCTCAT 59.476 57.895 0.00 0.00 0.00 2.90
3477 3597 0.531532 CTGGTCATGCGGTCCTCATC 60.532 60.000 0.00 0.00 0.00 2.92
3478 3598 1.264045 TGGTCATGCGGTCCTCATCA 61.264 55.000 0.00 0.00 0.00 3.07
3479 3599 0.811616 GGTCATGCGGTCCTCATCAC 60.812 60.000 0.00 0.00 0.00 3.06
3480 3600 1.141665 TCATGCGGTCCTCATCACG 59.858 57.895 0.00 0.00 0.00 4.35
3485 3605 4.148825 GGTCCTCATCACGCGGCT 62.149 66.667 12.47 0.00 0.00 5.52
3486 3606 2.125512 GTCCTCATCACGCGGCTT 60.126 61.111 12.47 0.00 0.00 4.35
3487 3607 2.167861 GTCCTCATCACGCGGCTTC 61.168 63.158 12.47 0.00 0.00 3.86
3488 3608 2.892425 CCTCATCACGCGGCTTCC 60.892 66.667 12.47 0.00 0.00 3.46
3489 3609 2.892425 CTCATCACGCGGCTTCCC 60.892 66.667 12.47 0.00 0.00 3.97
3490 3610 4.467084 TCATCACGCGGCTTCCCC 62.467 66.667 12.47 0.00 0.00 4.81
3491 3611 4.776322 CATCACGCGGCTTCCCCA 62.776 66.667 12.47 0.00 0.00 4.96
3492 3612 4.028490 ATCACGCGGCTTCCCCAA 62.028 61.111 12.47 0.00 0.00 4.12
3501 3621 4.278513 CTTCCCCAACGGTGCCCA 62.279 66.667 0.00 0.00 0.00 5.36
3502 3622 3.801068 CTTCCCCAACGGTGCCCAA 62.801 63.158 0.00 0.00 0.00 4.12
3503 3623 3.801068 TTCCCCAACGGTGCCCAAG 62.801 63.158 0.00 0.00 0.00 3.61
3506 3626 4.974721 CCAACGGTGCCCAAGCCT 62.975 66.667 0.00 0.00 38.69 4.58
3507 3627 3.673484 CAACGGTGCCCAAGCCTG 61.673 66.667 0.00 0.00 38.69 4.85
3508 3628 4.204028 AACGGTGCCCAAGCCTGT 62.204 61.111 0.00 0.00 38.69 4.00
3509 3629 2.824880 AACGGTGCCCAAGCCTGTA 61.825 57.895 0.00 0.00 38.69 2.74
3510 3630 2.033448 CGGTGCCCAAGCCTGTAA 59.967 61.111 0.00 0.00 38.69 2.41
3511 3631 2.040544 CGGTGCCCAAGCCTGTAAG 61.041 63.158 0.00 0.00 38.69 2.34
3512 3632 1.378762 GGTGCCCAAGCCTGTAAGA 59.621 57.895 0.00 0.00 38.69 2.10
3513 3633 0.251165 GGTGCCCAAGCCTGTAAGAA 60.251 55.000 0.00 0.00 38.69 2.52
3514 3634 1.168714 GTGCCCAAGCCTGTAAGAAG 58.831 55.000 0.00 0.00 38.69 2.85
3515 3635 1.064003 TGCCCAAGCCTGTAAGAAGA 58.936 50.000 0.00 0.00 38.69 2.87
3516 3636 1.635487 TGCCCAAGCCTGTAAGAAGAT 59.365 47.619 0.00 0.00 38.69 2.40
3517 3637 2.843730 TGCCCAAGCCTGTAAGAAGATA 59.156 45.455 0.00 0.00 38.69 1.98
3518 3638 3.459598 TGCCCAAGCCTGTAAGAAGATAT 59.540 43.478 0.00 0.00 38.69 1.63
3519 3639 3.817647 GCCCAAGCCTGTAAGAAGATATG 59.182 47.826 0.00 0.00 34.07 1.78
3520 3640 4.392940 CCCAAGCCTGTAAGAAGATATGG 58.607 47.826 0.00 0.00 34.07 2.74
3521 3641 3.817647 CCAAGCCTGTAAGAAGATATGGC 59.182 47.826 0.00 0.00 39.19 4.40
3522 3642 4.454678 CAAGCCTGTAAGAAGATATGGCA 58.545 43.478 0.00 0.00 41.12 4.92
3523 3643 4.989875 AGCCTGTAAGAAGATATGGCAT 57.010 40.909 4.88 4.88 41.12 4.40
3524 3644 5.316158 AGCCTGTAAGAAGATATGGCATT 57.684 39.130 4.78 0.00 41.12 3.56
3525 3645 5.699143 AGCCTGTAAGAAGATATGGCATTT 58.301 37.500 4.78 0.00 41.12 2.32
3526 3646 5.533903 AGCCTGTAAGAAGATATGGCATTTG 59.466 40.000 4.78 0.00 41.12 2.32
3527 3647 5.532406 GCCTGTAAGAAGATATGGCATTTGA 59.468 40.000 4.78 0.00 38.79 2.69
3528 3648 6.039717 GCCTGTAAGAAGATATGGCATTTGAA 59.960 38.462 4.78 0.00 38.79 2.69
3529 3649 7.416664 GCCTGTAAGAAGATATGGCATTTGAAA 60.417 37.037 4.78 0.00 38.79 2.69
3530 3650 8.469200 CCTGTAAGAAGATATGGCATTTGAAAA 58.531 33.333 4.78 0.00 34.07 2.29
3531 3651 9.512435 CTGTAAGAAGATATGGCATTTGAAAAG 57.488 33.333 4.78 0.00 34.07 2.27
3532 3652 8.469200 TGTAAGAAGATATGGCATTTGAAAAGG 58.531 33.333 4.78 0.00 0.00 3.11
3533 3653 7.722949 AAGAAGATATGGCATTTGAAAAGGA 57.277 32.000 4.78 0.00 0.00 3.36
3534 3654 7.909485 AGAAGATATGGCATTTGAAAAGGAT 57.091 32.000 4.78 0.00 0.00 3.24
3535 3655 7.723324 AGAAGATATGGCATTTGAAAAGGATG 58.277 34.615 4.78 0.00 0.00 3.51
3536 3656 5.850614 AGATATGGCATTTGAAAAGGATGC 58.149 37.500 4.78 0.00 44.06 3.91
3540 3660 2.004733 GCATTTGAAAAGGATGCCAGC 58.995 47.619 0.00 0.00 40.10 4.85
3541 3661 2.354403 GCATTTGAAAAGGATGCCAGCT 60.354 45.455 0.00 0.00 40.10 4.24
3542 3662 3.259064 CATTTGAAAAGGATGCCAGCTG 58.741 45.455 6.78 6.78 0.00 4.24
3543 3663 1.259609 TTGAAAAGGATGCCAGCTGG 58.740 50.000 29.34 29.34 38.53 4.85
3544 3664 0.612732 TGAAAAGGATGCCAGCTGGG 60.613 55.000 33.46 15.81 40.85 4.45
3545 3665 0.613012 GAAAAGGATGCCAGCTGGGT 60.613 55.000 33.46 0.00 39.65 4.51
3546 3666 0.901580 AAAAGGATGCCAGCTGGGTG 60.902 55.000 33.46 9.60 39.65 4.61
3547 3667 2.085343 AAAGGATGCCAGCTGGGTGT 62.085 55.000 33.46 7.86 39.65 4.16
3548 3668 2.753043 GGATGCCAGCTGGGTGTG 60.753 66.667 33.46 8.79 39.65 3.82
3549 3669 3.446570 GATGCCAGCTGGGTGTGC 61.447 66.667 33.46 19.03 39.65 4.57
3554 3674 4.641645 CAGCTGGGTGTGCCGGAA 62.642 66.667 5.05 0.00 34.97 4.30
3555 3675 3.884774 AGCTGGGTGTGCCGGAAA 61.885 61.111 5.05 0.00 34.97 3.13
3556 3676 3.670377 GCTGGGTGTGCCGGAAAC 61.670 66.667 5.05 2.47 34.97 2.78
3557 3677 2.113139 CTGGGTGTGCCGGAAACT 59.887 61.111 5.05 0.00 34.97 2.66
3558 3678 1.528309 CTGGGTGTGCCGGAAACTT 60.528 57.895 5.05 0.00 34.97 2.66
3559 3679 0.250553 CTGGGTGTGCCGGAAACTTA 60.251 55.000 5.05 0.00 34.97 2.24
3560 3680 0.402504 TGGGTGTGCCGGAAACTTAT 59.597 50.000 5.05 0.00 34.97 1.73
3561 3681 0.808755 GGGTGTGCCGGAAACTTATG 59.191 55.000 5.05 0.00 34.97 1.90
3562 3682 1.530323 GGTGTGCCGGAAACTTATGT 58.470 50.000 5.05 0.00 0.00 2.29
3563 3683 1.883926 GGTGTGCCGGAAACTTATGTT 59.116 47.619 5.05 0.00 38.16 2.71
3564 3684 2.095415 GGTGTGCCGGAAACTTATGTTC 60.095 50.000 5.05 0.00 34.96 3.18
3565 3685 2.812011 GTGTGCCGGAAACTTATGTTCT 59.188 45.455 5.05 0.00 34.96 3.01
3566 3686 3.998341 GTGTGCCGGAAACTTATGTTCTA 59.002 43.478 5.05 0.00 34.96 2.10
3567 3687 4.634443 GTGTGCCGGAAACTTATGTTCTAT 59.366 41.667 5.05 0.00 34.96 1.98
3568 3688 4.634004 TGTGCCGGAAACTTATGTTCTATG 59.366 41.667 5.05 0.00 34.96 2.23
3569 3689 4.035208 GTGCCGGAAACTTATGTTCTATGG 59.965 45.833 5.05 0.00 34.96 2.74
3570 3690 4.196971 GCCGGAAACTTATGTTCTATGGT 58.803 43.478 5.05 0.00 34.96 3.55
3571 3691 4.035208 GCCGGAAACTTATGTTCTATGGTG 59.965 45.833 5.05 0.00 34.96 4.17
3572 3692 5.424757 CCGGAAACTTATGTTCTATGGTGA 58.575 41.667 0.00 0.00 34.96 4.02
3573 3693 6.055588 CCGGAAACTTATGTTCTATGGTGAT 58.944 40.000 0.00 0.00 34.96 3.06
3574 3694 6.542370 CCGGAAACTTATGTTCTATGGTGATT 59.458 38.462 0.00 0.00 34.96 2.57
3575 3695 7.067008 CCGGAAACTTATGTTCTATGGTGATTT 59.933 37.037 0.00 0.00 34.96 2.17
3576 3696 8.458843 CGGAAACTTATGTTCTATGGTGATTTT 58.541 33.333 0.00 0.00 34.96 1.82
3577 3697 9.573133 GGAAACTTATGTTCTATGGTGATTTTG 57.427 33.333 0.00 0.00 34.96 2.44
3581 3701 8.739972 ACTTATGTTCTATGGTGATTTTGTTCC 58.260 33.333 0.00 0.00 0.00 3.62
3582 3702 5.621197 TGTTCTATGGTGATTTTGTTCCG 57.379 39.130 0.00 0.00 0.00 4.30
3583 3703 4.083003 TGTTCTATGGTGATTTTGTTCCGC 60.083 41.667 0.00 0.00 0.00 5.54
3584 3704 3.680490 TCTATGGTGATTTTGTTCCGCA 58.320 40.909 0.00 0.00 0.00 5.69
3585 3705 2.723124 ATGGTGATTTTGTTCCGCAC 57.277 45.000 0.00 0.00 0.00 5.34
3586 3706 1.393603 TGGTGATTTTGTTCCGCACA 58.606 45.000 0.00 0.00 0.00 4.57
3587 3707 1.336440 TGGTGATTTTGTTCCGCACAG 59.664 47.619 0.00 0.00 36.48 3.66
3588 3708 1.336755 GGTGATTTTGTTCCGCACAGT 59.663 47.619 0.00 0.00 36.48 3.55
3589 3709 2.604614 GGTGATTTTGTTCCGCACAGTC 60.605 50.000 0.00 0.00 36.48 3.51
3590 3710 2.290641 GTGATTTTGTTCCGCACAGTCT 59.709 45.455 0.00 0.00 36.48 3.24
3591 3711 3.496884 GTGATTTTGTTCCGCACAGTCTA 59.503 43.478 0.00 0.00 36.48 2.59
3592 3712 4.024387 GTGATTTTGTTCCGCACAGTCTAA 60.024 41.667 0.00 0.00 36.48 2.10
3593 3713 4.213270 TGATTTTGTTCCGCACAGTCTAAG 59.787 41.667 0.00 0.00 36.48 2.18
3594 3714 3.462483 TTTGTTCCGCACAGTCTAAGA 57.538 42.857 0.00 0.00 36.48 2.10
3595 3715 2.724977 TGTTCCGCACAGTCTAAGAG 57.275 50.000 0.00 0.00 0.00 2.85
3596 3716 2.235891 TGTTCCGCACAGTCTAAGAGA 58.764 47.619 0.00 0.00 0.00 3.10
3597 3717 2.030185 TGTTCCGCACAGTCTAAGAGAC 60.030 50.000 0.00 0.00 45.38 3.36
3598 3718 1.174783 TCCGCACAGTCTAAGAGACC 58.825 55.000 3.00 0.00 46.18 3.85
3599 3719 0.888619 CCGCACAGTCTAAGAGACCA 59.111 55.000 3.00 0.00 46.18 4.02
3600 3720 1.272490 CCGCACAGTCTAAGAGACCAA 59.728 52.381 3.00 0.00 46.18 3.67
3601 3721 2.288825 CCGCACAGTCTAAGAGACCAAA 60.289 50.000 3.00 0.00 46.18 3.28
3602 3722 2.989840 CGCACAGTCTAAGAGACCAAAG 59.010 50.000 3.00 0.00 46.18 2.77
3603 3723 3.305403 CGCACAGTCTAAGAGACCAAAGA 60.305 47.826 3.00 0.00 46.18 2.52
3604 3724 4.632153 GCACAGTCTAAGAGACCAAAGAA 58.368 43.478 3.00 0.00 46.18 2.52
3605 3725 4.688413 GCACAGTCTAAGAGACCAAAGAAG 59.312 45.833 3.00 0.00 46.18 2.85
3606 3726 4.688413 CACAGTCTAAGAGACCAAAGAAGC 59.312 45.833 3.00 0.00 46.18 3.86
3607 3727 3.923461 CAGTCTAAGAGACCAAAGAAGCG 59.077 47.826 3.00 0.00 46.18 4.68
3608 3728 2.668945 GTCTAAGAGACCAAAGAAGCGC 59.331 50.000 0.00 0.00 39.28 5.92
3609 3729 2.003301 CTAAGAGACCAAAGAAGCGCC 58.997 52.381 2.29 0.00 0.00 6.53
3610 3730 0.606673 AAGAGACCAAAGAAGCGCCC 60.607 55.000 2.29 0.00 0.00 6.13
3611 3731 2.034221 AGACCAAAGAAGCGCCCC 59.966 61.111 2.29 0.00 0.00 5.80
3612 3732 2.034221 GACCAAAGAAGCGCCCCT 59.966 61.111 2.29 0.00 0.00 4.79
3613 3733 1.198759 AGACCAAAGAAGCGCCCCTA 61.199 55.000 2.29 0.00 0.00 3.53
3614 3734 1.002502 ACCAAAGAAGCGCCCCTAC 60.003 57.895 2.29 0.00 0.00 3.18
3615 3735 2.106683 CCAAAGAAGCGCCCCTACG 61.107 63.158 2.29 0.00 0.00 3.51
3625 3745 4.690719 CCCCTACGCAACGCCACA 62.691 66.667 0.00 0.00 0.00 4.17
3626 3746 3.419759 CCCTACGCAACGCCACAC 61.420 66.667 0.00 0.00 0.00 3.82
3627 3747 2.357034 CCTACGCAACGCCACACT 60.357 61.111 0.00 0.00 0.00 3.55
3628 3748 1.080366 CCTACGCAACGCCACACTA 60.080 57.895 0.00 0.00 0.00 2.74
3629 3749 1.349259 CCTACGCAACGCCACACTAC 61.349 60.000 0.00 0.00 0.00 2.73
3630 3750 1.349259 CTACGCAACGCCACACTACC 61.349 60.000 0.00 0.00 0.00 3.18
3631 3751 2.768503 TACGCAACGCCACACTACCC 62.769 60.000 0.00 0.00 0.00 3.69
3632 3752 2.032071 GCAACGCCACACTACCCT 59.968 61.111 0.00 0.00 0.00 4.34
3633 3753 2.033194 GCAACGCCACACTACCCTC 61.033 63.158 0.00 0.00 0.00 4.30
3634 3754 1.736645 CAACGCCACACTACCCTCG 60.737 63.158 0.00 0.00 0.00 4.63
3635 3755 3.584868 AACGCCACACTACCCTCGC 62.585 63.158 0.00 0.00 0.00 5.03
3637 3757 4.065281 GCCACACTACCCTCGCGT 62.065 66.667 5.77 0.00 0.00 6.01
3638 3758 2.654877 CCACACTACCCTCGCGTT 59.345 61.111 5.77 0.00 0.00 4.84
3639 3759 1.736645 CCACACTACCCTCGCGTTG 60.737 63.158 5.77 0.00 0.00 4.10
3640 3760 1.736645 CACACTACCCTCGCGTTGG 60.737 63.158 5.77 10.74 0.00 3.77
3641 3761 2.813908 CACTACCCTCGCGTTGGC 60.814 66.667 5.77 0.00 0.00 4.52
3642 3762 3.307906 ACTACCCTCGCGTTGGCA 61.308 61.111 5.77 0.00 39.92 4.92
3643 3763 2.813908 CTACCCTCGCGTTGGCAC 60.814 66.667 5.77 0.00 39.92 5.01
3644 3764 4.382320 TACCCTCGCGTTGGCACC 62.382 66.667 5.77 0.00 39.92 5.01
3648 3768 3.423154 CTCGCGTTGGCACCCTTC 61.423 66.667 5.77 0.00 39.92 3.46
3649 3769 3.883744 CTCGCGTTGGCACCCTTCT 62.884 63.158 5.77 0.00 39.92 2.85
3650 3770 3.726517 CGCGTTGGCACCCTTCTG 61.727 66.667 0.00 0.00 39.92 3.02
3651 3771 4.043200 GCGTTGGCACCCTTCTGC 62.043 66.667 0.00 0.00 39.62 4.26
3652 3772 3.726517 CGTTGGCACCCTTCTGCG 61.727 66.667 0.00 0.00 38.12 5.18
3653 3773 2.594592 GTTGGCACCCTTCTGCGT 60.595 61.111 0.00 0.00 38.12 5.24
3654 3774 2.281484 TTGGCACCCTTCTGCGTC 60.281 61.111 0.00 0.00 38.12 5.19
3655 3775 4.680237 TGGCACCCTTCTGCGTCG 62.680 66.667 0.00 0.00 38.12 5.12
3656 3776 4.681978 GGCACCCTTCTGCGTCGT 62.682 66.667 0.00 0.00 38.12 4.34
3657 3777 3.112709 GCACCCTTCTGCGTCGTC 61.113 66.667 0.00 0.00 0.00 4.20
3658 3778 2.338620 CACCCTTCTGCGTCGTCA 59.661 61.111 0.00 0.00 0.00 4.35
3659 3779 1.300620 CACCCTTCTGCGTCGTCAA 60.301 57.895 0.00 0.00 0.00 3.18
3660 3780 0.670546 CACCCTTCTGCGTCGTCAAT 60.671 55.000 0.00 0.00 0.00 2.57
3661 3781 0.892755 ACCCTTCTGCGTCGTCAATA 59.107 50.000 0.00 0.00 0.00 1.90
3662 3782 1.480954 ACCCTTCTGCGTCGTCAATAT 59.519 47.619 0.00 0.00 0.00 1.28
3663 3783 2.691526 ACCCTTCTGCGTCGTCAATATA 59.308 45.455 0.00 0.00 0.00 0.86
3664 3784 3.131577 ACCCTTCTGCGTCGTCAATATAA 59.868 43.478 0.00 0.00 0.00 0.98
3665 3785 3.736252 CCCTTCTGCGTCGTCAATATAAG 59.264 47.826 0.00 0.00 0.00 1.73
3666 3786 3.182572 CCTTCTGCGTCGTCAATATAAGC 59.817 47.826 0.00 0.00 0.00 3.09
3667 3787 3.430333 TCTGCGTCGTCAATATAAGCA 57.570 42.857 0.00 0.00 0.00 3.91
3668 3788 3.776340 TCTGCGTCGTCAATATAAGCAA 58.224 40.909 0.00 0.00 32.53 3.91
3669 3789 4.368315 TCTGCGTCGTCAATATAAGCAAT 58.632 39.130 0.00 0.00 32.53 3.56
3670 3790 5.525199 TCTGCGTCGTCAATATAAGCAATA 58.475 37.500 0.00 0.00 32.53 1.90
3671 3791 5.980715 TCTGCGTCGTCAATATAAGCAATAA 59.019 36.000 0.00 0.00 32.53 1.40
3672 3792 6.143919 TCTGCGTCGTCAATATAAGCAATAAG 59.856 38.462 0.00 0.00 32.53 1.73
3673 3793 5.751509 TGCGTCGTCAATATAAGCAATAAGT 59.248 36.000 0.00 0.00 0.00 2.24
3674 3794 6.074516 TGCGTCGTCAATATAAGCAATAAGTC 60.075 38.462 0.00 0.00 0.00 3.01
3675 3795 6.505667 CGTCGTCAATATAAGCAATAAGTCG 58.494 40.000 0.00 0.00 0.00 4.18
3676 3796 6.141844 CGTCGTCAATATAAGCAATAAGTCGT 59.858 38.462 0.00 0.00 0.00 4.34
3677 3797 7.491683 GTCGTCAATATAAGCAATAAGTCGTC 58.508 38.462 0.00 0.00 0.00 4.20
3678 3798 6.358822 TCGTCAATATAAGCAATAAGTCGTCG 59.641 38.462 0.00 0.00 0.00 5.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.183361 ACCTACTAATCCATCCATCCTTTGTC 60.183 42.308 0.00 0.00 0.00 3.18
2 3 5.672194 ACCTACTAATCCATCCATCCTTTGT 59.328 40.000 0.00 0.00 0.00 2.83
6 7 5.093236 TCACCTACTAATCCATCCATCCT 57.907 43.478 0.00 0.00 0.00 3.24
7 8 5.308237 AGTTCACCTACTAATCCATCCATCC 59.692 44.000 0.00 0.00 0.00 3.51
8 9 6.426646 AGTTCACCTACTAATCCATCCATC 57.573 41.667 0.00 0.00 0.00 3.51
9 10 6.014156 GCTAGTTCACCTACTAATCCATCCAT 60.014 42.308 0.00 0.00 30.63 3.41
10 11 5.304614 GCTAGTTCACCTACTAATCCATCCA 59.695 44.000 0.00 0.00 30.63 3.41
11 12 5.540719 AGCTAGTTCACCTACTAATCCATCC 59.459 44.000 0.00 0.00 30.63 3.51
12 13 6.451393 CAGCTAGTTCACCTACTAATCCATC 58.549 44.000 0.00 0.00 30.63 3.51
13 14 5.305644 CCAGCTAGTTCACCTACTAATCCAT 59.694 44.000 0.00 0.00 30.63 3.41
14 15 4.649674 CCAGCTAGTTCACCTACTAATCCA 59.350 45.833 0.00 0.00 30.63 3.41
15 16 4.894114 TCCAGCTAGTTCACCTACTAATCC 59.106 45.833 0.00 0.00 30.63 3.01
16 17 6.466885 TTCCAGCTAGTTCACCTACTAATC 57.533 41.667 0.00 0.00 30.63 1.75
17 18 6.869206 TTTCCAGCTAGTTCACCTACTAAT 57.131 37.500 0.00 0.00 30.63 1.73
18 19 6.675413 TTTTCCAGCTAGTTCACCTACTAA 57.325 37.500 0.00 0.00 30.63 2.24
19 20 6.675413 TTTTTCCAGCTAGTTCACCTACTA 57.325 37.500 0.00 0.00 0.00 1.82
20 21 5.562298 TTTTTCCAGCTAGTTCACCTACT 57.438 39.130 0.00 0.00 0.00 2.57
42 43 9.710900 GAAATTCCTTTCAAGAAATACATGGTT 57.289 29.630 0.00 0.00 40.45 3.67
43 44 8.869109 TGAAATTCCTTTCAAGAAATACATGGT 58.131 29.630 0.00 0.00 45.91 3.55
56 57 3.888930 GGTGTGTCCTGAAATTCCTTTCA 59.111 43.478 1.29 1.29 46.53 2.69
57 58 3.255888 GGGTGTGTCCTGAAATTCCTTTC 59.744 47.826 0.00 0.00 41.01 2.62
58 59 3.117131 AGGGTGTGTCCTGAAATTCCTTT 60.117 43.478 0.00 0.00 35.47 3.11
59 60 2.447047 AGGGTGTGTCCTGAAATTCCTT 59.553 45.455 0.00 0.00 35.47 3.36
60 61 2.065799 AGGGTGTGTCCTGAAATTCCT 58.934 47.619 0.00 0.00 35.47 3.36
61 62 2.586648 AGGGTGTGTCCTGAAATTCC 57.413 50.000 0.00 0.00 35.47 3.01
69 70 1.747444 AGAAATCCAGGGTGTGTCCT 58.253 50.000 0.00 0.00 37.71 3.85
70 71 2.162681 CAAGAAATCCAGGGTGTGTCC 58.837 52.381 0.00 0.00 0.00 4.02
71 72 3.140325 TCAAGAAATCCAGGGTGTGTC 57.860 47.619 0.00 0.00 0.00 3.67
72 73 3.138283 TCTTCAAGAAATCCAGGGTGTGT 59.862 43.478 0.00 0.00 0.00 3.72
73 74 3.754965 TCTTCAAGAAATCCAGGGTGTG 58.245 45.455 0.00 0.00 0.00 3.82
74 75 4.664688 ATCTTCAAGAAATCCAGGGTGT 57.335 40.909 0.00 0.00 0.00 4.16
75 76 4.381292 GCAATCTTCAAGAAATCCAGGGTG 60.381 45.833 0.00 0.00 0.00 4.61
82 83 3.194116 TGGGCAGCAATCTTCAAGAAATC 59.806 43.478 0.00 0.00 0.00 2.17
92 93 3.233507 TCTTTTCTTTGGGCAGCAATCT 58.766 40.909 0.00 0.00 0.00 2.40
100 101 5.774498 TTTCTCTTCTCTTTTCTTTGGGC 57.226 39.130 0.00 0.00 0.00 5.36
104 105 6.120220 TCGGGTTTTCTCTTCTCTTTTCTTT 58.880 36.000 0.00 0.00 0.00 2.52
106 107 5.291905 TCGGGTTTTCTCTTCTCTTTTCT 57.708 39.130 0.00 0.00 0.00 2.52
122 123 4.800914 GCATCTAGCTCACATAATCGGGTT 60.801 45.833 0.00 0.00 41.15 4.11
129 130 7.553760 TCTTTTTCATGCATCTAGCTCACATAA 59.446 33.333 0.00 0.00 45.94 1.90
164 165 1.688772 TCATAGTACGGGAGTGAGCC 58.311 55.000 0.00 0.00 46.80 4.70
178 179 7.148069 GGGGATTTAAGGTGTGAAGTTTCATAG 60.148 40.741 0.00 0.00 39.73 2.23
265 269 5.671493 CGGGTCTTATCTTTTCCATGTACT 58.329 41.667 0.00 0.00 0.00 2.73
280 284 0.543410 TGGAAGTGAGGCGGGTCTTA 60.543 55.000 0.00 0.00 0.00 2.10
317 321 8.100791 TCCTTTCATTCGAGGAGATTTTTAAGA 58.899 33.333 0.00 0.00 37.15 2.10
340 344 8.850156 CCCGTGAATTATTCAATCTATTTTCCT 58.150 33.333 9.39 0.00 42.15 3.36
342 346 7.595130 GGCCCGTGAATTATTCAATCTATTTTC 59.405 37.037 9.39 0.00 42.15 2.29
373 379 1.277842 TGTTAGGTCATCGCACACCAT 59.722 47.619 0.00 0.00 34.80 3.55
377 383 2.225491 GCTTTTGTTAGGTCATCGCACA 59.775 45.455 0.00 0.00 0.00 4.57
397 403 2.930826 TGATCGAGGGGATTTAAGGC 57.069 50.000 0.00 0.00 34.82 4.35
449 457 2.668550 GTTCTGGGTTTCGCCGCT 60.669 61.111 0.00 0.00 38.44 5.52
467 475 4.202161 TGCAGGCCGAAAAGAAACATTTAA 60.202 37.500 0.00 0.00 0.00 1.52
476 484 1.153066 TGTGTGCAGGCCGAAAAGA 60.153 52.632 0.00 0.00 0.00 2.52
581 598 5.514500 AAGGACTGGTGCTTTATAAAGGA 57.486 39.130 23.37 19.35 38.07 3.36
590 607 4.662278 TGCTTTATAAAGGACTGGTGCTT 58.338 39.130 23.37 1.73 43.22 3.91
591 608 4.301072 TGCTTTATAAAGGACTGGTGCT 57.699 40.909 23.37 0.00 36.53 4.40
648 667 1.145759 ATGCACGACACGCCTTATCG 61.146 55.000 0.00 0.00 41.60 2.92
686 705 4.876107 ACTAGATTCAGTGGGCGTATTTTG 59.124 41.667 0.00 0.00 0.00 2.44
690 709 3.567397 AGACTAGATTCAGTGGGCGTAT 58.433 45.455 0.00 0.00 0.00 3.06
691 710 3.014304 AGACTAGATTCAGTGGGCGTA 57.986 47.619 0.00 0.00 0.00 4.42
692 711 1.853963 AGACTAGATTCAGTGGGCGT 58.146 50.000 0.00 0.00 0.00 5.68
693 712 3.215151 TCTAGACTAGATTCAGTGGGCG 58.785 50.000 8.17 0.00 0.00 6.13
699 718 4.518970 GGAGCCACTCTAGACTAGATTCAG 59.481 50.000 12.62 4.04 33.66 3.02
740 759 4.889427 CAGCGAACAGACGATGGA 57.111 55.556 0.00 0.00 44.18 3.41
743 762 1.142185 CGATGCAGCGAACAGACGAT 61.142 55.000 21.79 0.00 35.09 3.73
845 885 1.006102 AAAGGAGCAGTCGACACGG 60.006 57.895 19.50 7.93 0.00 4.94
846 886 1.891060 GCAAAGGAGCAGTCGACACG 61.891 60.000 19.50 9.55 0.00 4.49
847 887 1.569479 GGCAAAGGAGCAGTCGACAC 61.569 60.000 19.50 9.51 35.83 3.67
848 888 1.301716 GGCAAAGGAGCAGTCGACA 60.302 57.895 19.50 0.00 35.83 4.35
895 935 2.485038 AGGTCGTTTTGTTCGTTTGTGT 59.515 40.909 0.00 0.00 0.00 3.72
1167 1209 2.461110 GCACCGCGGGTTGTAGATG 61.461 63.158 31.76 16.94 31.02 2.90
1404 1449 1.077501 CACGGGCTTGTCCATCCAT 60.078 57.895 0.00 0.00 36.21 3.41
1599 1644 1.009222 GAACACCGTGTCGTCGTCT 60.009 57.895 4.23 0.00 0.00 4.18
1656 1701 1.210931 GTAGTACGGCTGCGTGTGA 59.789 57.895 6.44 0.00 0.00 3.58
2556 2665 1.746727 CTCGGAGACTGCGCGATTTG 61.747 60.000 12.10 0.00 0.00 2.32
2557 2666 1.517257 CTCGGAGACTGCGCGATTT 60.517 57.895 12.10 0.00 0.00 2.17
2558 2667 2.103143 CTCGGAGACTGCGCGATT 59.897 61.111 12.10 0.00 0.00 3.34
2559 2668 3.893763 CCTCGGAGACTGCGCGAT 61.894 66.667 12.10 0.00 0.00 4.58
2561 2670 4.544689 CTCCTCGGAGACTGCGCG 62.545 72.222 12.00 0.00 44.53 6.86
2562 2671 3.134792 TCTCCTCGGAGACTGCGC 61.135 66.667 12.00 0.00 45.26 6.09
2686 2795 1.906333 GCACCAACCAAATCCCGGT 60.906 57.895 0.00 0.00 38.85 5.28
2695 2804 3.496309 CTGGGCAGAGCACCAACCA 62.496 63.158 0.00 0.00 36.09 3.67
2742 2857 2.355412 GGCCAAAGGTCAAGGTACGTAT 60.355 50.000 0.00 0.00 0.00 3.06
2788 2906 5.355711 TCTCCTCCTCCCCTATTTAACAAA 58.644 41.667 0.00 0.00 0.00 2.83
2790 2908 4.557705 CTCTCCTCCTCCCCTATTTAACA 58.442 47.826 0.00 0.00 0.00 2.41
2874 2992 5.189145 ACTTTTGTCCCGTCCTATGAGTAAT 59.811 40.000 0.00 0.00 0.00 1.89
2882 3000 2.494870 GAGCTACTTTTGTCCCGTCCTA 59.505 50.000 0.00 0.00 0.00 2.94
2957 3076 2.052690 ACCCATCCGAGTCTGACCG 61.053 63.158 3.76 7.83 0.00 4.79
3108 3228 0.391661 GCTCCTCTGCACGATGGAAA 60.392 55.000 0.00 0.00 0.00 3.13
3167 3287 5.396324 GGTCCTTTTGTTTTCCTCAACCAAT 60.396 40.000 0.00 0.00 0.00 3.16
3223 3343 3.556543 TTAAAGCCGGACGCGACGT 62.557 57.895 15.93 4.60 45.10 4.34
3224 3344 1.689352 ATTTAAAGCCGGACGCGACG 61.689 55.000 15.93 17.33 44.76 5.12
3225 3345 0.445043 AATTTAAAGCCGGACGCGAC 59.555 50.000 15.93 6.56 44.76 5.19
3226 3346 2.007360 TAATTTAAAGCCGGACGCGA 57.993 45.000 15.93 0.00 44.76 5.87
3227 3347 2.810028 TTAATTTAAAGCCGGACGCG 57.190 45.000 5.05 3.53 44.76 6.01
3228 3348 6.727569 CTTTATTAATTTAAAGCCGGACGC 57.272 37.500 5.05 0.00 33.69 5.19
3253 3373 4.113815 TCTGGATGCCGCCTTGGG 62.114 66.667 0.00 0.00 38.63 4.12
3254 3374 2.825836 GTCTGGATGCCGCCTTGG 60.826 66.667 0.00 0.00 42.50 3.61
3255 3375 1.651240 CTTGTCTGGATGCCGCCTTG 61.651 60.000 0.00 0.00 0.00 3.61
3256 3376 1.377725 CTTGTCTGGATGCCGCCTT 60.378 57.895 0.00 0.00 0.00 4.35
3257 3377 2.270205 CTTGTCTGGATGCCGCCT 59.730 61.111 0.00 0.00 0.00 5.52
3258 3378 2.252072 TACCTTGTCTGGATGCCGCC 62.252 60.000 0.00 0.00 0.00 6.13
3259 3379 0.179045 ATACCTTGTCTGGATGCCGC 60.179 55.000 0.00 0.00 0.00 6.53
3260 3380 1.138859 TGATACCTTGTCTGGATGCCG 59.861 52.381 0.00 0.00 0.00 5.69
3261 3381 2.945668 GTTGATACCTTGTCTGGATGCC 59.054 50.000 0.00 0.00 0.00 4.40
3262 3382 2.609459 CGTTGATACCTTGTCTGGATGC 59.391 50.000 0.00 0.00 0.00 3.91
3263 3383 3.861840 ACGTTGATACCTTGTCTGGATG 58.138 45.455 0.00 0.00 0.00 3.51
3264 3384 4.553330 AACGTTGATACCTTGTCTGGAT 57.447 40.909 0.00 0.00 0.00 3.41
3265 3385 4.281435 TGTAACGTTGATACCTTGTCTGGA 59.719 41.667 11.99 0.00 0.00 3.86
3266 3386 4.562082 TGTAACGTTGATACCTTGTCTGG 58.438 43.478 11.99 0.00 0.00 3.86
3267 3387 5.107220 GGTTGTAACGTTGATACCTTGTCTG 60.107 44.000 11.99 0.00 0.00 3.51
3268 3388 4.992951 GGTTGTAACGTTGATACCTTGTCT 59.007 41.667 11.99 0.00 0.00 3.41
3269 3389 4.152938 GGGTTGTAACGTTGATACCTTGTC 59.847 45.833 11.99 0.00 0.00 3.18
3270 3390 4.067192 GGGTTGTAACGTTGATACCTTGT 58.933 43.478 11.99 0.00 0.00 3.16
3271 3391 4.066490 TGGGTTGTAACGTTGATACCTTG 58.934 43.478 11.99 0.00 0.00 3.61
3272 3392 4.067192 GTGGGTTGTAACGTTGATACCTT 58.933 43.478 11.99 0.00 0.00 3.50
3273 3393 3.557686 GGTGGGTTGTAACGTTGATACCT 60.558 47.826 11.99 0.00 0.00 3.08
3274 3394 2.743664 GGTGGGTTGTAACGTTGATACC 59.256 50.000 11.99 14.04 0.00 2.73
3275 3395 3.667360 AGGTGGGTTGTAACGTTGATAC 58.333 45.455 11.99 1.36 0.00 2.24
3276 3396 4.354893 AAGGTGGGTTGTAACGTTGATA 57.645 40.909 11.99 0.00 0.00 2.15
3277 3397 2.943036 AGGTGGGTTGTAACGTTGAT 57.057 45.000 11.99 0.00 0.00 2.57
3278 3398 2.713863 AAGGTGGGTTGTAACGTTGA 57.286 45.000 11.99 0.00 0.00 3.18
3279 3399 4.897025 TTTAAGGTGGGTTGTAACGTTG 57.103 40.909 11.99 0.00 0.00 4.10
3280 3400 4.338964 CCTTTTAAGGTGGGTTGTAACGTT 59.661 41.667 5.88 5.88 41.41 3.99
3281 3401 3.884693 CCTTTTAAGGTGGGTTGTAACGT 59.115 43.478 0.15 0.00 41.41 3.99
3282 3402 4.492791 CCTTTTAAGGTGGGTTGTAACG 57.507 45.455 0.15 0.00 41.41 3.18
3295 3415 2.488153 CGAGCCCAAGGAACCTTTTAAG 59.512 50.000 3.10 0.00 33.42 1.85
3296 3416 2.510613 CGAGCCCAAGGAACCTTTTAA 58.489 47.619 3.10 0.00 33.42 1.52
3297 3417 1.884928 GCGAGCCCAAGGAACCTTTTA 60.885 52.381 3.10 0.00 33.42 1.52
3298 3418 1.179174 GCGAGCCCAAGGAACCTTTT 61.179 55.000 3.10 0.00 33.42 2.27
3299 3419 1.603739 GCGAGCCCAAGGAACCTTT 60.604 57.895 3.10 0.00 33.42 3.11
3300 3420 2.034221 GCGAGCCCAAGGAACCTT 59.966 61.111 0.00 0.00 36.60 3.50
3301 3421 3.249189 TGCGAGCCCAAGGAACCT 61.249 61.111 0.00 0.00 0.00 3.50
3302 3422 2.747855 CTGCGAGCCCAAGGAACC 60.748 66.667 0.00 0.00 0.00 3.62
3303 3423 2.747855 CCTGCGAGCCCAAGGAAC 60.748 66.667 0.00 0.00 0.00 3.62
3304 3424 4.722700 GCCTGCGAGCCCAAGGAA 62.723 66.667 4.38 0.00 0.00 3.36
3317 3437 4.767255 GTCTCAGTGCCGGGCCTG 62.767 72.222 23.50 23.50 0.00 4.85
3319 3439 4.767255 CTGTCTCAGTGCCGGGCC 62.767 72.222 17.97 8.02 0.00 5.80
3320 3440 3.537206 AACTGTCTCAGTGCCGGGC 62.537 63.158 13.32 13.32 44.62 6.13
3321 3441 1.374758 GAACTGTCTCAGTGCCGGG 60.375 63.158 2.18 0.00 44.62 5.73
3322 3442 0.249868 TTGAACTGTCTCAGTGCCGG 60.250 55.000 0.00 0.00 44.62 6.13
3323 3443 1.528586 CTTTGAACTGTCTCAGTGCCG 59.471 52.381 3.12 0.00 44.62 5.69
3324 3444 2.545946 GTCTTTGAACTGTCTCAGTGCC 59.454 50.000 3.12 0.51 44.62 5.01
3325 3445 3.198068 TGTCTTTGAACTGTCTCAGTGC 58.802 45.455 3.12 2.17 44.62 4.40
3326 3446 5.998454 AATGTCTTTGAACTGTCTCAGTG 57.002 39.130 3.12 0.00 44.62 3.66
3328 3448 7.721286 AGTTAATGTCTTTGAACTGTCTCAG 57.279 36.000 0.00 0.00 37.52 3.35
3329 3449 9.042008 GTTAGTTAATGTCTTTGAACTGTCTCA 57.958 33.333 0.00 0.00 34.15 3.27
3330 3450 9.042008 TGTTAGTTAATGTCTTTGAACTGTCTC 57.958 33.333 0.00 0.00 34.15 3.36
3331 3451 8.827677 GTGTTAGTTAATGTCTTTGAACTGTCT 58.172 33.333 0.00 0.00 34.15 3.41
3332 3452 8.609176 TGTGTTAGTTAATGTCTTTGAACTGTC 58.391 33.333 0.00 0.00 34.15 3.51
3333 3453 8.395633 GTGTGTTAGTTAATGTCTTTGAACTGT 58.604 33.333 0.00 0.00 34.15 3.55
3334 3454 8.394877 TGTGTGTTAGTTAATGTCTTTGAACTG 58.605 33.333 0.00 0.00 34.15 3.16
3335 3455 8.500753 TGTGTGTTAGTTAATGTCTTTGAACT 57.499 30.769 0.00 0.00 36.21 3.01
3336 3456 9.562583 TTTGTGTGTTAGTTAATGTCTTTGAAC 57.437 29.630 0.00 0.00 0.00 3.18
3338 3458 9.781834 CTTTTGTGTGTTAGTTAATGTCTTTGA 57.218 29.630 0.00 0.00 0.00 2.69
3339 3459 8.531530 GCTTTTGTGTGTTAGTTAATGTCTTTG 58.468 33.333 0.00 0.00 0.00 2.77
3340 3460 7.431084 CGCTTTTGTGTGTTAGTTAATGTCTTT 59.569 33.333 0.00 0.00 0.00 2.52
3341 3461 6.910433 CGCTTTTGTGTGTTAGTTAATGTCTT 59.090 34.615 0.00 0.00 0.00 3.01
3342 3462 6.427150 CGCTTTTGTGTGTTAGTTAATGTCT 58.573 36.000 0.00 0.00 0.00 3.41
3343 3463 5.623673 CCGCTTTTGTGTGTTAGTTAATGTC 59.376 40.000 0.00 0.00 0.00 3.06
3344 3464 5.297278 TCCGCTTTTGTGTGTTAGTTAATGT 59.703 36.000 0.00 0.00 0.00 2.71
3345 3465 5.753744 TCCGCTTTTGTGTGTTAGTTAATG 58.246 37.500 0.00 0.00 0.00 1.90
3346 3466 5.562113 GCTCCGCTTTTGTGTGTTAGTTAAT 60.562 40.000 0.00 0.00 0.00 1.40
3347 3467 4.260866 GCTCCGCTTTTGTGTGTTAGTTAA 60.261 41.667 0.00 0.00 0.00 2.01
3348 3468 3.249080 GCTCCGCTTTTGTGTGTTAGTTA 59.751 43.478 0.00 0.00 0.00 2.24
3349 3469 2.032924 GCTCCGCTTTTGTGTGTTAGTT 59.967 45.455 0.00 0.00 0.00 2.24
3350 3470 1.602377 GCTCCGCTTTTGTGTGTTAGT 59.398 47.619 0.00 0.00 0.00 2.24
3351 3471 1.398451 CGCTCCGCTTTTGTGTGTTAG 60.398 52.381 0.00 0.00 0.00 2.34
3352 3472 0.584396 CGCTCCGCTTTTGTGTGTTA 59.416 50.000 0.00 0.00 0.00 2.41
3353 3473 1.092921 TCGCTCCGCTTTTGTGTGTT 61.093 50.000 0.00 0.00 0.00 3.32
3354 3474 1.498865 CTCGCTCCGCTTTTGTGTGT 61.499 55.000 0.00 0.00 0.00 3.72
3355 3475 1.205064 CTCGCTCCGCTTTTGTGTG 59.795 57.895 0.00 0.00 0.00 3.82
3356 3476 1.069090 TCTCGCTCCGCTTTTGTGT 59.931 52.632 0.00 0.00 0.00 3.72
3357 3477 1.221466 TGTCTCGCTCCGCTTTTGTG 61.221 55.000 0.00 0.00 0.00 3.33
3358 3478 0.531974 TTGTCTCGCTCCGCTTTTGT 60.532 50.000 0.00 0.00 0.00 2.83
3359 3479 0.164647 CTTGTCTCGCTCCGCTTTTG 59.835 55.000 0.00 0.00 0.00 2.44
3360 3480 0.249911 ACTTGTCTCGCTCCGCTTTT 60.250 50.000 0.00 0.00 0.00 2.27
3361 3481 0.601558 TACTTGTCTCGCTCCGCTTT 59.398 50.000 0.00 0.00 0.00 3.51
3362 3482 0.171455 CTACTTGTCTCGCTCCGCTT 59.829 55.000 0.00 0.00 0.00 4.68
3363 3483 1.803943 CTACTTGTCTCGCTCCGCT 59.196 57.895 0.00 0.00 0.00 5.52
3364 3484 1.874466 GCTACTTGTCTCGCTCCGC 60.874 63.158 0.00 0.00 0.00 5.54
3365 3485 0.248296 GAGCTACTTGTCTCGCTCCG 60.248 60.000 0.00 0.00 42.20 4.63
3366 3486 0.811915 TGAGCTACTTGTCTCGCTCC 59.188 55.000 7.55 0.00 46.18 4.70
3367 3487 2.255316 GTTGAGCTACTTGTCTCGCTC 58.745 52.381 0.00 0.00 46.74 5.03
3368 3488 1.401670 CGTTGAGCTACTTGTCTCGCT 60.402 52.381 0.00 0.00 35.03 4.93
3369 3489 0.985549 CGTTGAGCTACTTGTCTCGC 59.014 55.000 0.00 0.00 32.20 5.03
3370 3490 0.985549 GCGTTGAGCTACTTGTCTCG 59.014 55.000 0.00 0.00 44.04 4.04
3382 3502 4.153986 CAGCTTGAGTATTTTGCGTTGAG 58.846 43.478 0.00 0.00 0.00 3.02
3383 3503 3.058293 CCAGCTTGAGTATTTTGCGTTGA 60.058 43.478 0.00 0.00 0.00 3.18
3384 3504 3.058293 TCCAGCTTGAGTATTTTGCGTTG 60.058 43.478 0.00 0.00 0.00 4.10
3385 3505 3.146066 TCCAGCTTGAGTATTTTGCGTT 58.854 40.909 0.00 0.00 0.00 4.84
3386 3506 2.778299 TCCAGCTTGAGTATTTTGCGT 58.222 42.857 0.00 0.00 0.00 5.24
3387 3507 3.127548 ACATCCAGCTTGAGTATTTTGCG 59.872 43.478 0.00 0.00 0.00 4.85
3388 3508 4.708726 ACATCCAGCTTGAGTATTTTGC 57.291 40.909 0.00 0.00 0.00 3.68
3389 3509 6.506500 AGAACATCCAGCTTGAGTATTTTG 57.493 37.500 0.00 0.00 0.00 2.44
3390 3510 6.151817 GGAAGAACATCCAGCTTGAGTATTTT 59.848 38.462 0.00 0.00 39.42 1.82
3391 3511 5.649831 GGAAGAACATCCAGCTTGAGTATTT 59.350 40.000 0.00 0.00 39.42 1.40
3392 3512 5.045286 AGGAAGAACATCCAGCTTGAGTATT 60.045 40.000 0.00 0.00 42.27 1.89
3393 3513 4.472833 AGGAAGAACATCCAGCTTGAGTAT 59.527 41.667 0.00 0.00 42.27 2.12
3394 3514 3.840666 AGGAAGAACATCCAGCTTGAGTA 59.159 43.478 0.00 0.00 42.27 2.59
3395 3515 2.641815 AGGAAGAACATCCAGCTTGAGT 59.358 45.455 0.00 0.00 42.27 3.41
3396 3516 3.008330 CAGGAAGAACATCCAGCTTGAG 58.992 50.000 0.00 0.00 42.27 3.02
3397 3517 2.877300 GCAGGAAGAACATCCAGCTTGA 60.877 50.000 6.29 0.00 45.61 3.02
3398 3518 1.471684 GCAGGAAGAACATCCAGCTTG 59.528 52.381 6.29 0.00 45.61 4.01
3399 3519 1.831580 GCAGGAAGAACATCCAGCTT 58.168 50.000 6.29 0.00 45.61 3.74
3400 3520 3.566130 GCAGGAAGAACATCCAGCT 57.434 52.632 6.29 0.00 45.61 4.24
3402 3522 1.372087 GCGGCAGGAAGAACATCCAG 61.372 60.000 0.00 0.00 42.27 3.86
3403 3523 1.377202 GCGGCAGGAAGAACATCCA 60.377 57.895 0.00 0.00 42.27 3.41
3404 3524 2.464459 CGCGGCAGGAAGAACATCC 61.464 63.158 0.00 0.00 39.96 3.51
3405 3525 3.093278 CGCGGCAGGAAGAACATC 58.907 61.111 0.00 0.00 0.00 3.06
3406 3526 3.127533 GCGCGGCAGGAAGAACAT 61.128 61.111 8.83 0.00 0.00 2.71
3407 3527 3.825160 AAGCGCGGCAGGAAGAACA 62.825 57.895 8.83 0.00 0.00 3.18
3408 3528 2.514505 GAAAGCGCGGCAGGAAGAAC 62.515 60.000 8.83 0.00 0.00 3.01
3409 3529 2.281484 AAAGCGCGGCAGGAAGAA 60.281 55.556 8.83 0.00 0.00 2.52
3410 3530 2.742372 GAAAGCGCGGCAGGAAGA 60.742 61.111 8.83 0.00 0.00 2.87
3411 3531 3.049674 TGAAAGCGCGGCAGGAAG 61.050 61.111 8.83 0.00 0.00 3.46
3412 3532 3.353836 GTGAAAGCGCGGCAGGAA 61.354 61.111 8.83 0.00 0.00 3.36
3415 3535 3.434319 ATGGTGAAAGCGCGGCAG 61.434 61.111 8.83 0.00 36.92 4.85
3416 3536 3.736100 CATGGTGAAAGCGCGGCA 61.736 61.111 8.83 0.00 36.92 5.69
3418 3538 3.736100 TGCATGGTGAAAGCGCGG 61.736 61.111 8.83 0.00 36.92 6.46
3419 3539 2.502510 GTGCATGGTGAAAGCGCG 60.503 61.111 0.00 0.00 36.92 6.86
3420 3540 1.443194 CTGTGCATGGTGAAAGCGC 60.443 57.895 0.00 0.00 36.92 5.92
3421 3541 1.443194 GCTGTGCATGGTGAAAGCG 60.443 57.895 0.00 0.00 36.92 4.68
3422 3542 0.316204 AAGCTGTGCATGGTGAAAGC 59.684 50.000 0.00 0.00 0.00 3.51
3423 3543 1.610038 TCAAGCTGTGCATGGTGAAAG 59.390 47.619 0.00 0.00 0.00 2.62
3424 3544 1.689984 TCAAGCTGTGCATGGTGAAA 58.310 45.000 0.00 0.00 0.00 2.69
3425 3545 1.814394 GATCAAGCTGTGCATGGTGAA 59.186 47.619 0.00 0.00 0.00 3.18
3426 3546 1.003928 AGATCAAGCTGTGCATGGTGA 59.996 47.619 0.00 0.00 0.00 4.02
3427 3547 1.132453 CAGATCAAGCTGTGCATGGTG 59.868 52.381 0.00 0.00 0.00 4.17
3428 3548 1.460504 CAGATCAAGCTGTGCATGGT 58.539 50.000 0.00 0.00 0.00 3.55
3429 3549 0.100682 GCAGATCAAGCTGTGCATGG 59.899 55.000 0.00 0.00 38.17 3.66
3430 3550 1.064208 GAGCAGATCAAGCTGTGCATG 59.936 52.381 16.22 0.00 43.58 4.06
3431 3551 1.380524 GAGCAGATCAAGCTGTGCAT 58.619 50.000 16.22 0.00 43.58 3.96
3432 3552 0.675837 GGAGCAGATCAAGCTGTGCA 60.676 55.000 16.22 0.00 43.58 4.57
3433 3553 0.675837 TGGAGCAGATCAAGCTGTGC 60.676 55.000 16.22 5.88 43.58 4.57
3434 3554 1.671328 CATGGAGCAGATCAAGCTGTG 59.329 52.381 16.22 9.07 43.58 3.66
3435 3555 1.558294 TCATGGAGCAGATCAAGCTGT 59.442 47.619 16.22 1.54 43.58 4.40
3436 3556 2.327200 TCATGGAGCAGATCAAGCTG 57.673 50.000 16.22 4.53 43.58 4.24
3437 3557 2.224572 GGATCATGGAGCAGATCAAGCT 60.225 50.000 11.89 11.89 46.82 3.74
3438 3558 2.152830 GGATCATGGAGCAGATCAAGC 58.847 52.381 0.00 0.00 41.84 4.01
3439 3559 3.403968 CAGGATCATGGAGCAGATCAAG 58.596 50.000 0.00 0.00 41.84 3.02
3440 3560 2.105993 CCAGGATCATGGAGCAGATCAA 59.894 50.000 21.94 0.00 43.57 2.57
3441 3561 1.697982 CCAGGATCATGGAGCAGATCA 59.302 52.381 21.94 0.00 43.57 2.92
3442 3562 1.698532 ACCAGGATCATGGAGCAGATC 59.301 52.381 32.01 0.00 43.57 2.75
3443 3563 1.698532 GACCAGGATCATGGAGCAGAT 59.301 52.381 32.01 9.12 43.57 2.90
3444 3564 1.126488 GACCAGGATCATGGAGCAGA 58.874 55.000 32.01 0.00 43.57 4.26
3445 3565 0.835276 TGACCAGGATCATGGAGCAG 59.165 55.000 32.01 6.21 43.57 4.24
3446 3566 1.514983 ATGACCAGGATCATGGAGCA 58.485 50.000 32.01 26.18 43.57 4.26
3452 3572 0.107456 GACCGCATGACCAGGATCAT 59.893 55.000 0.00 0.00 40.03 2.45
3453 3573 1.522092 GACCGCATGACCAGGATCA 59.478 57.895 0.00 0.00 0.00 2.92
3454 3574 1.227674 GGACCGCATGACCAGGATC 60.228 63.158 0.00 0.00 0.00 3.36
3455 3575 1.690219 GAGGACCGCATGACCAGGAT 61.690 60.000 0.00 0.00 0.00 3.24
3456 3576 2.284625 AGGACCGCATGACCAGGA 60.285 61.111 0.00 0.00 0.00 3.86
3457 3577 1.976132 ATGAGGACCGCATGACCAGG 61.976 60.000 10.24 0.00 0.00 4.45
3458 3578 0.531532 GATGAGGACCGCATGACCAG 60.532 60.000 16.16 0.00 0.00 4.00
3459 3579 1.264045 TGATGAGGACCGCATGACCA 61.264 55.000 16.16 4.75 0.00 4.02
3460 3580 0.811616 GTGATGAGGACCGCATGACC 60.812 60.000 16.16 1.98 0.00 4.02
3461 3581 1.148157 CGTGATGAGGACCGCATGAC 61.148 60.000 16.16 16.09 0.00 3.06
3462 3582 1.141665 CGTGATGAGGACCGCATGA 59.858 57.895 16.16 4.04 0.00 3.07
3463 3583 2.528743 GCGTGATGAGGACCGCATG 61.529 63.158 16.16 2.59 45.12 4.06
3464 3584 2.202932 GCGTGATGAGGACCGCAT 60.203 61.111 10.87 10.87 45.12 4.73
3465 3585 4.794439 CGCGTGATGAGGACCGCA 62.794 66.667 0.00 0.00 46.02 5.69
3468 3588 3.665675 AAGCCGCGTGATGAGGACC 62.666 63.158 4.92 0.00 40.56 4.46
3469 3589 2.125512 AAGCCGCGTGATGAGGAC 60.126 61.111 4.92 0.00 40.56 3.85
3470 3590 2.184322 GAAGCCGCGTGATGAGGA 59.816 61.111 4.92 0.00 40.56 3.71
3471 3591 2.892425 GGAAGCCGCGTGATGAGG 60.892 66.667 4.92 0.00 41.15 3.86
3472 3592 2.892425 GGGAAGCCGCGTGATGAG 60.892 66.667 4.92 0.00 0.00 2.90
3473 3593 4.467084 GGGGAAGCCGCGTGATGA 62.467 66.667 4.92 0.00 0.00 2.92
3474 3594 4.776322 TGGGGAAGCCGCGTGATG 62.776 66.667 4.92 0.00 39.47 3.07
3475 3595 4.028490 TTGGGGAAGCCGCGTGAT 62.028 61.111 4.92 0.00 39.47 3.06
3495 3615 1.168714 CTTCTTACAGGCTTGGGCAC 58.831 55.000 0.00 0.00 40.87 5.01
3496 3616 1.064003 TCTTCTTACAGGCTTGGGCA 58.936 50.000 0.00 0.00 40.87 5.36
3497 3617 2.426842 ATCTTCTTACAGGCTTGGGC 57.573 50.000 0.00 0.00 37.82 5.36
3498 3618 4.392940 CCATATCTTCTTACAGGCTTGGG 58.607 47.826 0.00 0.00 0.00 4.12
3499 3619 3.817647 GCCATATCTTCTTACAGGCTTGG 59.182 47.826 0.00 0.00 37.67 3.61
3500 3620 4.454678 TGCCATATCTTCTTACAGGCTTG 58.545 43.478 0.00 0.00 41.12 4.01
3501 3621 4.778213 TGCCATATCTTCTTACAGGCTT 57.222 40.909 0.00 0.00 41.12 4.35
3502 3622 4.989875 ATGCCATATCTTCTTACAGGCT 57.010 40.909 0.00 0.00 41.12 4.58
3503 3623 5.532406 TCAAATGCCATATCTTCTTACAGGC 59.468 40.000 0.00 0.00 40.93 4.85
3504 3624 7.572523 TTCAAATGCCATATCTTCTTACAGG 57.427 36.000 0.00 0.00 0.00 4.00
3505 3625 9.512435 CTTTTCAAATGCCATATCTTCTTACAG 57.488 33.333 0.00 0.00 0.00 2.74
3506 3626 8.469200 CCTTTTCAAATGCCATATCTTCTTACA 58.531 33.333 0.00 0.00 0.00 2.41
3507 3627 8.686334 TCCTTTTCAAATGCCATATCTTCTTAC 58.314 33.333 0.00 0.00 0.00 2.34
3508 3628 8.821686 TCCTTTTCAAATGCCATATCTTCTTA 57.178 30.769 0.00 0.00 0.00 2.10
3509 3629 7.722949 TCCTTTTCAAATGCCATATCTTCTT 57.277 32.000 0.00 0.00 0.00 2.52
3510 3630 7.686127 GCATCCTTTTCAAATGCCATATCTTCT 60.686 37.037 0.00 0.00 39.87 2.85
3511 3631 6.423001 GCATCCTTTTCAAATGCCATATCTTC 59.577 38.462 0.00 0.00 39.87 2.87
3512 3632 6.285990 GCATCCTTTTCAAATGCCATATCTT 58.714 36.000 0.00 0.00 39.87 2.40
3513 3633 5.850614 GCATCCTTTTCAAATGCCATATCT 58.149 37.500 0.00 0.00 39.87 1.98
3520 3640 2.004733 GCTGGCATCCTTTTCAAATGC 58.995 47.619 0.00 0.00 43.95 3.56
3521 3641 3.259064 CAGCTGGCATCCTTTTCAAATG 58.741 45.455 5.57 0.00 0.00 2.32
3522 3642 2.235402 CCAGCTGGCATCCTTTTCAAAT 59.765 45.455 22.33 0.00 0.00 2.32
3523 3643 1.619827 CCAGCTGGCATCCTTTTCAAA 59.380 47.619 22.33 0.00 0.00 2.69
3524 3644 1.259609 CCAGCTGGCATCCTTTTCAA 58.740 50.000 22.33 0.00 0.00 2.69
3525 3645 0.612732 CCCAGCTGGCATCCTTTTCA 60.613 55.000 28.39 0.00 0.00 2.69
3526 3646 0.613012 ACCCAGCTGGCATCCTTTTC 60.613 55.000 28.39 0.00 37.83 2.29
3527 3647 0.901580 CACCCAGCTGGCATCCTTTT 60.902 55.000 28.39 0.00 37.83 2.27
3528 3648 1.304713 CACCCAGCTGGCATCCTTT 60.305 57.895 28.39 1.45 37.83 3.11
3529 3649 2.357836 CACCCAGCTGGCATCCTT 59.642 61.111 28.39 3.32 37.83 3.36
3530 3650 2.937689 ACACCCAGCTGGCATCCT 60.938 61.111 28.39 3.99 37.83 3.24
3531 3651 2.753043 CACACCCAGCTGGCATCC 60.753 66.667 28.39 0.00 37.83 3.51
3532 3652 3.446570 GCACACCCAGCTGGCATC 61.447 66.667 28.39 9.86 37.83 3.91
3537 3657 4.641645 TTCCGGCACACCCAGCTG 62.642 66.667 6.78 6.78 38.10 4.24
3538 3658 3.884774 TTTCCGGCACACCCAGCT 61.885 61.111 0.00 0.00 0.00 4.24
3539 3659 3.670377 GTTTCCGGCACACCCAGC 61.670 66.667 0.00 0.00 0.00 4.85
3540 3660 0.250553 TAAGTTTCCGGCACACCCAG 60.251 55.000 0.00 0.00 0.00 4.45
3541 3661 0.402504 ATAAGTTTCCGGCACACCCA 59.597 50.000 0.00 0.00 0.00 4.51
3542 3662 0.808755 CATAAGTTTCCGGCACACCC 59.191 55.000 0.00 0.00 0.00 4.61
3543 3663 1.530323 ACATAAGTTTCCGGCACACC 58.470 50.000 0.00 0.00 0.00 4.16
3544 3664 2.812011 AGAACATAAGTTTCCGGCACAC 59.188 45.455 0.00 0.00 38.30 3.82
3545 3665 3.134574 AGAACATAAGTTTCCGGCACA 57.865 42.857 0.00 0.00 38.30 4.57
3546 3666 4.035208 CCATAGAACATAAGTTTCCGGCAC 59.965 45.833 0.00 0.00 38.30 5.01
3547 3667 4.196193 CCATAGAACATAAGTTTCCGGCA 58.804 43.478 0.00 0.00 38.30 5.69
3548 3668 4.035208 CACCATAGAACATAAGTTTCCGGC 59.965 45.833 0.00 0.00 38.30 6.13
3549 3669 5.424757 TCACCATAGAACATAAGTTTCCGG 58.575 41.667 0.00 0.00 38.30 5.14
3550 3670 7.553881 AATCACCATAGAACATAAGTTTCCG 57.446 36.000 0.00 0.00 38.30 4.30
3551 3671 9.573133 CAAAATCACCATAGAACATAAGTTTCC 57.427 33.333 0.00 0.00 38.30 3.13
3555 3675 8.739972 GGAACAAAATCACCATAGAACATAAGT 58.260 33.333 0.00 0.00 0.00 2.24
3556 3676 7.910162 CGGAACAAAATCACCATAGAACATAAG 59.090 37.037 0.00 0.00 0.00 1.73
3557 3677 7.627513 GCGGAACAAAATCACCATAGAACATAA 60.628 37.037 0.00 0.00 0.00 1.90
3558 3678 6.183360 GCGGAACAAAATCACCATAGAACATA 60.183 38.462 0.00 0.00 0.00 2.29
3559 3679 5.393027 GCGGAACAAAATCACCATAGAACAT 60.393 40.000 0.00 0.00 0.00 2.71
3560 3680 4.083003 GCGGAACAAAATCACCATAGAACA 60.083 41.667 0.00 0.00 0.00 3.18
3561 3681 4.083003 TGCGGAACAAAATCACCATAGAAC 60.083 41.667 0.00 0.00 0.00 3.01
3562 3682 4.075682 TGCGGAACAAAATCACCATAGAA 58.924 39.130 0.00 0.00 0.00 2.10
3563 3683 3.438781 GTGCGGAACAAAATCACCATAGA 59.561 43.478 0.00 0.00 0.00 1.98
3564 3684 3.190327 TGTGCGGAACAAAATCACCATAG 59.810 43.478 0.00 0.00 35.24 2.23
3565 3685 3.149981 TGTGCGGAACAAAATCACCATA 58.850 40.909 0.00 0.00 35.24 2.74
3566 3686 1.959985 TGTGCGGAACAAAATCACCAT 59.040 42.857 0.00 0.00 35.24 3.55
3567 3687 1.336440 CTGTGCGGAACAAAATCACCA 59.664 47.619 0.00 0.00 38.67 4.17
3568 3688 1.336755 ACTGTGCGGAACAAAATCACC 59.663 47.619 0.00 0.00 38.67 4.02
3569 3689 2.290641 AGACTGTGCGGAACAAAATCAC 59.709 45.455 0.00 0.00 38.67 3.06
3570 3690 2.571212 AGACTGTGCGGAACAAAATCA 58.429 42.857 0.00 0.00 38.67 2.57
3571 3691 4.451096 TCTTAGACTGTGCGGAACAAAATC 59.549 41.667 0.00 0.00 38.67 2.17
3572 3692 4.385825 TCTTAGACTGTGCGGAACAAAAT 58.614 39.130 0.00 0.00 38.67 1.82
3573 3693 3.799366 TCTTAGACTGTGCGGAACAAAA 58.201 40.909 0.00 0.00 38.67 2.44
3574 3694 3.069016 TCTCTTAGACTGTGCGGAACAAA 59.931 43.478 0.00 0.00 38.67 2.83
3575 3695 2.626266 TCTCTTAGACTGTGCGGAACAA 59.374 45.455 0.00 0.00 38.67 2.83
3576 3696 2.030185 GTCTCTTAGACTGTGCGGAACA 60.030 50.000 0.00 0.00 41.88 3.18
3577 3697 2.597520 GTCTCTTAGACTGTGCGGAAC 58.402 52.381 0.00 0.00 41.88 3.62
3578 3698 1.544691 GGTCTCTTAGACTGTGCGGAA 59.455 52.381 6.99 0.00 44.46 4.30
3579 3699 1.174783 GGTCTCTTAGACTGTGCGGA 58.825 55.000 6.99 0.00 44.46 5.54
3580 3700 0.888619 TGGTCTCTTAGACTGTGCGG 59.111 55.000 6.99 0.00 44.46 5.69
3581 3701 2.724977 TTGGTCTCTTAGACTGTGCG 57.275 50.000 6.99 0.00 44.46 5.34
3582 3702 4.258702 TCTTTGGTCTCTTAGACTGTGC 57.741 45.455 6.99 0.00 44.46 4.57
3583 3703 4.688413 GCTTCTTTGGTCTCTTAGACTGTG 59.312 45.833 6.99 0.00 44.46 3.66
3584 3704 4.559704 CGCTTCTTTGGTCTCTTAGACTGT 60.560 45.833 6.99 0.00 44.46 3.55
3585 3705 3.923461 CGCTTCTTTGGTCTCTTAGACTG 59.077 47.826 6.99 0.00 44.46 3.51
3586 3706 3.615351 GCGCTTCTTTGGTCTCTTAGACT 60.615 47.826 0.00 0.00 44.46 3.24
3587 3707 2.668945 GCGCTTCTTTGGTCTCTTAGAC 59.331 50.000 0.00 0.00 44.32 2.59
3588 3708 2.353803 GGCGCTTCTTTGGTCTCTTAGA 60.354 50.000 7.64 0.00 0.00 2.10
3589 3709 2.003301 GGCGCTTCTTTGGTCTCTTAG 58.997 52.381 7.64 0.00 0.00 2.18
3590 3710 1.338769 GGGCGCTTCTTTGGTCTCTTA 60.339 52.381 7.64 0.00 0.00 2.10
3591 3711 0.606673 GGGCGCTTCTTTGGTCTCTT 60.607 55.000 7.64 0.00 0.00 2.85
3592 3712 1.003233 GGGCGCTTCTTTGGTCTCT 60.003 57.895 7.64 0.00 0.00 3.10
3593 3713 2.041115 GGGGCGCTTCTTTGGTCTC 61.041 63.158 7.64 0.00 0.00 3.36
3594 3714 1.198759 TAGGGGCGCTTCTTTGGTCT 61.199 55.000 10.13 0.00 0.00 3.85
3595 3715 1.025113 GTAGGGGCGCTTCTTTGGTC 61.025 60.000 10.13 0.00 0.00 4.02
3596 3716 1.002502 GTAGGGGCGCTTCTTTGGT 60.003 57.895 10.13 0.00 0.00 3.67
3597 3717 2.106683 CGTAGGGGCGCTTCTTTGG 61.107 63.158 10.13 0.00 0.00 3.28
3598 3718 3.486263 CGTAGGGGCGCTTCTTTG 58.514 61.111 10.13 0.00 0.00 2.77
3608 3728 4.690719 TGTGGCGTTGCGTAGGGG 62.691 66.667 0.00 0.00 0.00 4.79
3609 3729 2.495366 TAGTGTGGCGTTGCGTAGGG 62.495 60.000 0.00 0.00 0.00 3.53
3610 3730 1.080366 TAGTGTGGCGTTGCGTAGG 60.080 57.895 0.00 0.00 0.00 3.18
3611 3731 1.349259 GGTAGTGTGGCGTTGCGTAG 61.349 60.000 0.00 0.00 0.00 3.51
3612 3732 1.373246 GGTAGTGTGGCGTTGCGTA 60.373 57.895 0.00 0.00 0.00 4.42
3613 3733 2.663852 GGTAGTGTGGCGTTGCGT 60.664 61.111 0.00 0.00 0.00 5.24
3614 3734 3.419759 GGGTAGTGTGGCGTTGCG 61.420 66.667 0.00 0.00 0.00 4.85
3615 3735 2.032071 AGGGTAGTGTGGCGTTGC 59.968 61.111 0.00 0.00 0.00 4.17
3616 3736 1.736645 CGAGGGTAGTGTGGCGTTG 60.737 63.158 0.00 0.00 0.00 4.10
3617 3737 2.654877 CGAGGGTAGTGTGGCGTT 59.345 61.111 0.00 0.00 0.00 4.84
3618 3738 4.065281 GCGAGGGTAGTGTGGCGT 62.065 66.667 0.00 0.00 0.00 5.68
3620 3740 3.584868 AACGCGAGGGTAGTGTGGC 62.585 63.158 15.93 0.00 32.12 5.01
3621 3741 1.736645 CAACGCGAGGGTAGTGTGG 60.737 63.158 15.93 0.00 32.12 4.17
3622 3742 1.736645 CCAACGCGAGGGTAGTGTG 60.737 63.158 15.93 0.00 32.12 3.82
3623 3743 2.654877 CCAACGCGAGGGTAGTGT 59.345 61.111 15.93 0.00 0.00 3.55
3624 3744 2.813908 GCCAACGCGAGGGTAGTG 60.814 66.667 15.93 0.00 0.00 2.74
3625 3745 3.307906 TGCCAACGCGAGGGTAGT 61.308 61.111 15.93 0.00 38.08 2.73
3626 3746 2.813908 GTGCCAACGCGAGGGTAG 60.814 66.667 15.93 0.00 38.08 3.18
3627 3747 4.382320 GGTGCCAACGCGAGGGTA 62.382 66.667 15.93 10.64 38.08 3.69
3631 3751 3.423154 GAAGGGTGCCAACGCGAG 61.423 66.667 15.93 4.40 43.74 5.03
3632 3752 3.936203 AGAAGGGTGCCAACGCGA 61.936 61.111 15.93 0.00 43.74 5.87
3633 3753 3.726517 CAGAAGGGTGCCAACGCG 61.727 66.667 3.53 3.53 43.74 6.01
3634 3754 4.043200 GCAGAAGGGTGCCAACGC 62.043 66.667 0.00 0.00 37.49 4.84
3635 3755 3.726517 CGCAGAAGGGTGCCAACG 61.727 66.667 0.00 0.00 40.62 4.10
3636 3756 2.594592 ACGCAGAAGGGTGCCAAC 60.595 61.111 0.00 0.00 40.62 3.77
3637 3757 2.281484 GACGCAGAAGGGTGCCAA 60.281 61.111 0.00 0.00 41.49 4.52
3638 3758 4.680237 CGACGCAGAAGGGTGCCA 62.680 66.667 0.00 0.00 41.49 4.92
3639 3759 4.681978 ACGACGCAGAAGGGTGCC 62.682 66.667 0.00 0.00 41.49 5.01
3640 3760 3.112709 GACGACGCAGAAGGGTGC 61.113 66.667 0.00 0.00 41.49 5.01
3641 3761 0.670546 ATTGACGACGCAGAAGGGTG 60.671 55.000 0.00 0.00 41.49 4.61
3642 3762 0.892755 TATTGACGACGCAGAAGGGT 59.107 50.000 0.00 0.00 44.44 4.34
3643 3763 2.225068 ATATTGACGACGCAGAAGGG 57.775 50.000 0.00 0.00 0.00 3.95
3644 3764 3.182572 GCTTATATTGACGACGCAGAAGG 59.817 47.826 0.00 0.00 0.00 3.46
3645 3765 3.796717 TGCTTATATTGACGACGCAGAAG 59.203 43.478 0.00 0.00 0.00 2.85
3646 3766 3.776340 TGCTTATATTGACGACGCAGAA 58.224 40.909 0.00 0.00 0.00 3.02
3647 3767 3.430333 TGCTTATATTGACGACGCAGA 57.570 42.857 0.00 0.00 0.00 4.26
3648 3768 4.715520 ATTGCTTATATTGACGACGCAG 57.284 40.909 0.00 0.00 0.00 5.18
3649 3769 5.751509 ACTTATTGCTTATATTGACGACGCA 59.248 36.000 0.00 0.00 0.00 5.24
3650 3770 6.211664 ACTTATTGCTTATATTGACGACGC 57.788 37.500 0.00 0.00 0.00 5.19
3651 3771 6.141844 ACGACTTATTGCTTATATTGACGACG 59.858 38.462 0.00 0.00 0.00 5.12
3652 3772 7.390918 ACGACTTATTGCTTATATTGACGAC 57.609 36.000 0.00 0.00 0.00 4.34
3653 3773 6.358822 CGACGACTTATTGCTTATATTGACGA 59.641 38.462 0.00 0.00 0.00 4.20
3654 3774 6.505667 CGACGACTTATTGCTTATATTGACG 58.494 40.000 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.