Multiple sequence alignment - TraesCS1D01G190300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G190300 chr1D 100.000 2794 0 0 1 2794 262309676 262312469 0.000000e+00 5160.0
1 TraesCS1D01G190300 chr1D 94.198 586 15 4 1 586 318848 319414 0.000000e+00 876.0
2 TraesCS1D01G190300 chr1D 97.368 38 1 0 2234 2271 262311874 262311911 6.460000e-07 65.8
3 TraesCS1D01G190300 chr1D 97.368 38 1 0 2199 2236 262311909 262311946 6.460000e-07 65.8
4 TraesCS1D01G190300 chr1A 91.232 1437 87 22 787 2200 337655270 337653850 0.000000e+00 1919.0
5 TraesCS1D01G190300 chr1B 91.773 1252 77 9 741 1967 349512368 349511118 0.000000e+00 1718.0
6 TraesCS1D01G190300 chr1B 77.928 222 47 2 1092 1312 349569553 349569773 1.350000e-28 137.0
7 TraesCS1D01G190300 chr7A 95.726 585 22 2 1 585 104511261 104510680 0.000000e+00 939.0
8 TraesCS1D01G190300 chr7A 90.763 249 21 2 2301 2548 631367416 631367663 5.770000e-87 331.0
9 TraesCS1D01G190300 chrUn 95.392 586 24 2 1 586 75053888 75053306 0.000000e+00 929.0
10 TraesCS1D01G190300 chrUn 95.392 586 24 2 1 586 311567207 311567789 0.000000e+00 929.0
11 TraesCS1D01G190300 chr3B 94.068 590 34 1 1 590 125914908 125915496 0.000000e+00 894.0
12 TraesCS1D01G190300 chr2D 95.577 520 22 1 66 585 129842055 129841537 0.000000e+00 832.0
13 TraesCS1D01G190300 chr2D 91.358 243 18 3 2303 2544 305074615 305074855 2.070000e-86 329.0
14 TraesCS1D01G190300 chr2D 79.577 284 53 4 1039 1318 599003754 599003472 6.100000e-47 198.0
15 TraesCS1D01G190300 chr2D 84.956 113 13 3 1966 2078 179651666 179651558 8.180000e-21 111.0
16 TraesCS1D01G190300 chr3A 83.877 583 83 7 8 585 54946310 54945734 1.890000e-151 545.0
17 TraesCS1D01G190300 chr3A 81.159 276 42 8 1043 1313 483743346 483743616 2.180000e-51 213.0
18 TraesCS1D01G190300 chr4A 83.562 584 87 5 6 585 20355934 20355356 3.170000e-149 538.0
19 TraesCS1D01G190300 chr5D 81.772 587 94 9 6 586 503922018 503921439 1.950000e-131 479.0
20 TraesCS1D01G190300 chr5D 90.119 253 21 4 2294 2544 33663333 33663583 2.680000e-85 326.0
21 TraesCS1D01G190300 chr5A 93.987 316 15 2 273 586 66615991 66615678 2.520000e-130 475.0
22 TraesCS1D01G190300 chr7D 91.600 250 18 3 2296 2544 31062089 31061842 2.660000e-90 342.0
23 TraesCS1D01G190300 chr7D 90.361 249 20 3 2297 2544 447057984 447058229 9.650000e-85 324.0
24 TraesCS1D01G190300 chr7D 76.891 238 50 5 1967 2203 264486380 264486147 2.260000e-26 130.0
25 TraesCS1D01G190300 chr7D 79.861 144 16 9 1961 2100 167214836 167214702 2.960000e-15 93.5
26 TraesCS1D01G190300 chr7D 79.845 129 19 5 1967 2093 5427441 5427564 1.380000e-13 87.9
27 TraesCS1D01G190300 chr2A 91.498 247 18 3 2300 2544 362446140 362445895 1.240000e-88 337.0
28 TraesCS1D01G190300 chr2A 83.146 178 20 9 1966 2140 194119007 194118837 1.340000e-33 154.0
29 TraesCS1D01G190300 chr2A 75.676 185 32 12 1965 2144 502620130 502619954 2.310000e-11 80.5
30 TraesCS1D01G190300 chr6B 91.322 242 19 2 2304 2544 523343637 523343877 2.070000e-86 329.0
31 TraesCS1D01G190300 chr2B 89.313 262 23 5 2290 2550 101976702 101976959 9.650000e-85 324.0
32 TraesCS1D01G190300 chr2B 89.804 255 22 4 2296 2547 525562007 525562260 9.650000e-85 324.0
33 TraesCS1D01G190300 chr4D 76.923 182 33 8 1967 2146 130439850 130439676 8.240000e-16 95.3
34 TraesCS1D01G190300 chr3D 77.160 162 30 6 1967 2127 40230001 40230156 1.380000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G190300 chr1D 262309676 262312469 2793 False 1763.866667 5160 98.245333 1 2794 3 chr1D.!!$F2 2793
1 TraesCS1D01G190300 chr1D 318848 319414 566 False 876.000000 876 94.198000 1 586 1 chr1D.!!$F1 585
2 TraesCS1D01G190300 chr1A 337653850 337655270 1420 True 1919.000000 1919 91.232000 787 2200 1 chr1A.!!$R1 1413
3 TraesCS1D01G190300 chr1B 349511118 349512368 1250 True 1718.000000 1718 91.773000 741 1967 1 chr1B.!!$R1 1226
4 TraesCS1D01G190300 chr7A 104510680 104511261 581 True 939.000000 939 95.726000 1 585 1 chr7A.!!$R1 584
5 TraesCS1D01G190300 chrUn 75053306 75053888 582 True 929.000000 929 95.392000 1 586 1 chrUn.!!$R1 585
6 TraesCS1D01G190300 chrUn 311567207 311567789 582 False 929.000000 929 95.392000 1 586 1 chrUn.!!$F1 585
7 TraesCS1D01G190300 chr3B 125914908 125915496 588 False 894.000000 894 94.068000 1 590 1 chr3B.!!$F1 589
8 TraesCS1D01G190300 chr2D 129841537 129842055 518 True 832.000000 832 95.577000 66 585 1 chr2D.!!$R1 519
9 TraesCS1D01G190300 chr3A 54945734 54946310 576 True 545.000000 545 83.877000 8 585 1 chr3A.!!$R1 577
10 TraesCS1D01G190300 chr4A 20355356 20355934 578 True 538.000000 538 83.562000 6 585 1 chr4A.!!$R1 579
11 TraesCS1D01G190300 chr5D 503921439 503922018 579 True 479.000000 479 81.772000 6 586 1 chr5D.!!$R1 580


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
60 61 0.035820 GGGTTGATGGAGCCGTACAA 60.036 55.0 0.00 0.0 0.0 2.41 F
716 722 0.037975 ACCGAATTCAGTTACGCGGT 60.038 50.0 12.47 0.0 46.1 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1347 1372 0.110486 ACATCACGGCAGGGAAAAGT 59.890 50.0 0.0 0.0 30.96 2.66 R
2624 2668 0.037326 CAGTTGGCAGCGTCCTAAGA 60.037 55.0 0.0 0.0 0.00 2.10 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 0.035820 GGGTTGATGGAGCCGTACAA 60.036 55.000 0.00 0.00 0.00 2.41
158 159 2.665185 GCGAACTGGTTGACGGCT 60.665 61.111 0.00 0.00 0.00 5.52
421 425 3.740115 TGGAAACAGAAGGCAAGAGTAC 58.260 45.455 0.00 0.00 35.01 2.73
590 596 3.469008 TCGGATTGCCTAACAGTATGG 57.531 47.619 0.00 0.00 43.62 2.74
591 597 2.104111 TCGGATTGCCTAACAGTATGGG 59.896 50.000 0.00 0.00 43.62 4.00
592 598 2.810400 CGGATTGCCTAACAGTATGGGG 60.810 54.545 0.00 0.00 43.62 4.96
593 599 2.441750 GGATTGCCTAACAGTATGGGGA 59.558 50.000 0.00 0.00 43.62 4.81
594 600 3.117663 GGATTGCCTAACAGTATGGGGAA 60.118 47.826 0.00 0.00 43.62 3.97
595 601 4.532834 GATTGCCTAACAGTATGGGGAAA 58.467 43.478 0.00 0.00 43.62 3.13
596 602 4.390129 TTGCCTAACAGTATGGGGAAAA 57.610 40.909 0.00 0.00 43.62 2.29
597 603 4.601406 TGCCTAACAGTATGGGGAAAAT 57.399 40.909 0.00 0.00 43.62 1.82
598 604 5.718801 TGCCTAACAGTATGGGGAAAATA 57.281 39.130 0.00 0.00 43.62 1.40
599 605 6.274322 TGCCTAACAGTATGGGGAAAATAT 57.726 37.500 0.00 0.00 43.62 1.28
600 606 7.395525 TGCCTAACAGTATGGGGAAAATATA 57.604 36.000 0.00 0.00 43.62 0.86
601 607 7.817440 TGCCTAACAGTATGGGGAAAATATAA 58.183 34.615 0.00 0.00 43.62 0.98
602 608 7.942341 TGCCTAACAGTATGGGGAAAATATAAG 59.058 37.037 0.00 0.00 43.62 1.73
603 609 7.393515 GCCTAACAGTATGGGGAAAATATAAGG 59.606 40.741 0.00 0.00 43.62 2.69
604 610 8.665906 CCTAACAGTATGGGGAAAATATAAGGA 58.334 37.037 0.00 0.00 43.62 3.36
607 613 9.951866 AACAGTATGGGGAAAATATAAGGAAAT 57.048 29.630 0.00 0.00 43.62 2.17
644 650 8.122952 ACAGTTTAAATTTGAAGAGTCTGTTCG 58.877 33.333 9.51 0.00 0.00 3.95
645 651 7.587757 CAGTTTAAATTTGAAGAGTCTGTTCGG 59.412 37.037 0.00 0.00 0.00 4.30
646 652 7.497909 AGTTTAAATTTGAAGAGTCTGTTCGGA 59.502 33.333 0.00 0.00 0.00 4.55
647 653 5.674933 AAATTTGAAGAGTCTGTTCGGAC 57.325 39.130 5.35 3.82 36.56 4.79
648 654 2.417339 TTGAAGAGTCTGTTCGGACG 57.583 50.000 5.35 0.00 40.76 4.79
649 655 0.039437 TGAAGAGTCTGTTCGGACGC 60.039 55.000 5.35 7.28 40.76 5.19
650 656 0.039437 GAAGAGTCTGTTCGGACGCA 60.039 55.000 15.45 0.00 40.76 5.24
651 657 0.039074 AAGAGTCTGTTCGGACGCAG 60.039 55.000 15.45 3.20 40.76 5.18
681 687 6.683090 TCAATTCTTAAAATGCGTTTTCCG 57.317 33.333 19.59 11.99 38.44 4.30
682 688 6.210078 TCAATTCTTAAAATGCGTTTTCCGT 58.790 32.000 19.59 0.00 38.44 4.69
683 689 6.697892 TCAATTCTTAAAATGCGTTTTCCGTT 59.302 30.769 19.59 7.02 38.44 4.44
684 690 7.861372 TCAATTCTTAAAATGCGTTTTCCGTTA 59.139 29.630 19.59 0.00 38.44 3.18
685 691 8.480853 CAATTCTTAAAATGCGTTTTCCGTTAA 58.519 29.630 19.59 7.83 38.44 2.01
686 692 6.973006 TCTTAAAATGCGTTTTCCGTTAAC 57.027 33.333 19.59 0.00 38.44 2.01
687 693 6.727215 TCTTAAAATGCGTTTTCCGTTAACT 58.273 32.000 19.59 0.00 38.44 2.24
688 694 6.633634 TCTTAAAATGCGTTTTCCGTTAACTG 59.366 34.615 19.59 0.00 38.44 3.16
689 695 2.981400 ATGCGTTTTCCGTTAACTGG 57.019 45.000 3.71 7.06 39.32 4.00
690 696 1.950828 TGCGTTTTCCGTTAACTGGA 58.049 45.000 13.06 13.06 39.32 3.86
691 697 2.286872 TGCGTTTTCCGTTAACTGGAA 58.713 42.857 20.67 20.67 43.59 3.53
698 704 3.907894 TCCGTTAACTGGAAAATGCAC 57.092 42.857 14.24 0.00 30.98 4.57
699 705 2.554893 TCCGTTAACTGGAAAATGCACC 59.445 45.455 14.24 0.00 30.98 5.01
700 706 2.580589 CGTTAACTGGAAAATGCACCG 58.419 47.619 3.71 0.00 0.00 4.94
701 707 2.224549 CGTTAACTGGAAAATGCACCGA 59.775 45.455 3.71 0.00 0.00 4.69
702 708 3.304123 CGTTAACTGGAAAATGCACCGAA 60.304 43.478 3.71 0.00 0.00 4.30
703 709 4.614993 CGTTAACTGGAAAATGCACCGAAT 60.615 41.667 3.71 0.00 0.00 3.34
704 710 5.227152 GTTAACTGGAAAATGCACCGAATT 58.773 37.500 0.00 0.00 0.00 2.17
705 711 3.575965 ACTGGAAAATGCACCGAATTC 57.424 42.857 0.00 0.00 0.00 2.17
706 712 2.890311 ACTGGAAAATGCACCGAATTCA 59.110 40.909 6.22 0.00 0.00 2.57
707 713 3.057315 ACTGGAAAATGCACCGAATTCAG 60.057 43.478 6.22 0.00 0.00 3.02
708 714 2.890311 TGGAAAATGCACCGAATTCAGT 59.110 40.909 6.22 0.00 0.00 3.41
709 715 3.320541 TGGAAAATGCACCGAATTCAGTT 59.679 39.130 6.22 0.00 0.00 3.16
710 716 4.520874 TGGAAAATGCACCGAATTCAGTTA 59.479 37.500 6.22 0.00 0.00 2.24
711 717 4.857037 GGAAAATGCACCGAATTCAGTTAC 59.143 41.667 6.22 0.00 0.00 2.50
712 718 3.740044 AATGCACCGAATTCAGTTACG 57.260 42.857 6.22 0.00 0.00 3.18
713 719 0.793861 TGCACCGAATTCAGTTACGC 59.206 50.000 6.22 1.19 0.00 4.42
714 720 0.247145 GCACCGAATTCAGTTACGCG 60.247 55.000 3.53 3.53 0.00 6.01
715 721 0.368907 CACCGAATTCAGTTACGCGG 59.631 55.000 12.47 0.00 43.95 6.46
716 722 0.037975 ACCGAATTCAGTTACGCGGT 60.038 50.000 12.47 0.00 46.10 5.68
717 723 0.368907 CCGAATTCAGTTACGCGGTG 59.631 55.000 12.47 1.97 34.45 4.94
718 724 1.065358 CGAATTCAGTTACGCGGTGT 58.935 50.000 12.47 0.00 0.00 4.16
719 725 2.252747 CGAATTCAGTTACGCGGTGTA 58.747 47.619 12.47 0.00 0.00 2.90
720 726 2.662637 CGAATTCAGTTACGCGGTGTAA 59.337 45.455 12.47 9.93 40.71 2.41
721 727 3.241552 CGAATTCAGTTACGCGGTGTAAG 60.242 47.826 12.47 4.64 43.52 2.34
722 728 2.068837 TTCAGTTACGCGGTGTAAGG 57.931 50.000 12.47 9.84 43.52 2.69
723 729 0.244450 TCAGTTACGCGGTGTAAGGG 59.756 55.000 12.47 9.52 43.52 3.95
724 730 0.738412 CAGTTACGCGGTGTAAGGGG 60.738 60.000 12.47 3.96 43.52 4.79
725 731 1.187567 AGTTACGCGGTGTAAGGGGT 61.188 55.000 12.47 0.00 43.52 4.95
726 732 0.320683 GTTACGCGGTGTAAGGGGTT 60.321 55.000 12.47 0.00 43.52 4.11
727 733 0.320596 TTACGCGGTGTAAGGGGTTG 60.321 55.000 12.47 0.00 38.12 3.77
728 734 2.784889 TACGCGGTGTAAGGGGTTGC 62.785 60.000 12.47 0.00 0.00 4.17
729 735 2.033602 GCGGTGTAAGGGGTTGCT 59.966 61.111 0.00 0.00 0.00 3.91
730 736 1.297364 GCGGTGTAAGGGGTTGCTA 59.703 57.895 0.00 0.00 0.00 3.49
731 737 0.743345 GCGGTGTAAGGGGTTGCTAG 60.743 60.000 0.00 0.00 0.00 3.42
732 738 0.899720 CGGTGTAAGGGGTTGCTAGA 59.100 55.000 0.00 0.00 0.00 2.43
733 739 1.134788 CGGTGTAAGGGGTTGCTAGAG 60.135 57.143 0.00 0.00 0.00 2.43
734 740 2.185387 GGTGTAAGGGGTTGCTAGAGA 58.815 52.381 0.00 0.00 0.00 3.10
735 741 2.772515 GGTGTAAGGGGTTGCTAGAGAT 59.227 50.000 0.00 0.00 0.00 2.75
736 742 3.432326 GGTGTAAGGGGTTGCTAGAGATG 60.432 52.174 0.00 0.00 0.00 2.90
737 743 2.170607 TGTAAGGGGTTGCTAGAGATGC 59.829 50.000 0.00 0.00 0.00 3.91
738 744 1.589414 AAGGGGTTGCTAGAGATGCT 58.411 50.000 0.00 0.00 0.00 3.79
739 745 1.127343 AGGGGTTGCTAGAGATGCTC 58.873 55.000 0.00 0.00 0.00 4.26
750 756 4.766891 GCTAGAGATGCTCTAATCTGGAGT 59.233 45.833 5.75 0.00 41.74 3.85
751 757 5.106157 GCTAGAGATGCTCTAATCTGGAGTC 60.106 48.000 5.75 0.00 41.74 3.36
817 835 1.135257 AGAAGAATCTCGAGGTGCACG 60.135 52.381 13.56 0.00 0.00 5.34
897 916 3.560636 ACTGTACTTTGACTGCCAACT 57.439 42.857 0.00 0.00 33.85 3.16
930 953 2.854185 GACGCACGTAGGTATACAAACC 59.146 50.000 5.01 0.00 40.06 3.27
964 987 1.939974 TCTGTCAGTGTTGCACAGAC 58.060 50.000 14.92 14.92 46.30 3.51
994 1019 2.806818 GGAGAAAAACAGACGGAGAACC 59.193 50.000 0.00 0.00 0.00 3.62
1059 1084 4.814294 AGCCCGTTCGTCATCCGC 62.814 66.667 0.00 0.00 36.19 5.54
1181 1206 4.530857 GGTCCCGGTGCTCATCCG 62.531 72.222 0.00 0.00 46.49 4.18
1342 1367 4.903355 TGCTTGCGCGTGTGTTGC 62.903 61.111 8.43 4.88 39.65 4.17
1344 1369 3.952675 CTTGCGCGTGTGTTGCCT 61.953 61.111 8.43 0.00 0.00 4.75
1347 1372 3.947841 GCGCGTGTGTTGCCTCAA 61.948 61.111 8.43 0.00 0.00 3.02
1349 1374 2.534019 CGCGTGTGTTGCCTCAACT 61.534 57.895 0.00 0.00 43.85 3.16
1353 1380 2.450160 CGTGTGTTGCCTCAACTTTTC 58.550 47.619 10.52 1.38 43.85 2.29
1363 1390 0.181587 TCAACTTTTCCCTGCCGTGA 59.818 50.000 0.00 0.00 0.00 4.35
1384 1412 0.591659 GTTTGAGTTTGAGCCGGGTC 59.408 55.000 26.70 26.70 0.00 4.46
1490 1521 3.323136 GACACGCTCGCGGCTATG 61.323 66.667 16.18 11.94 44.69 2.23
1632 1663 3.215597 ATGTTCGGCGTCGTGGTCA 62.216 57.895 10.18 5.19 37.69 4.02
1634 1665 2.126228 TTCGGCGTCGTGGTCATC 60.126 61.111 10.18 0.00 37.69 2.92
1646 1677 2.415608 GGTCATCGAGGTCGGCAGA 61.416 63.158 0.00 0.00 40.29 4.26
1756 1787 2.968574 ACCTGAAGAAGCTTCAGTCTCA 59.031 45.455 27.57 20.39 43.19 3.27
1767 1798 1.153489 CAGTCTCATCGGGCTGGTG 60.153 63.158 0.00 0.00 0.00 4.17
1808 1839 5.073192 TGTCGTGACAAAAGTACATTTCG 57.927 39.130 0.00 0.00 38.56 3.46
1809 1840 4.567558 TGTCGTGACAAAAGTACATTTCGT 59.432 37.500 0.00 0.00 38.56 3.85
1810 1841 5.128468 GTCGTGACAAAAGTACATTTCGTC 58.872 41.667 14.05 14.05 0.00 4.20
1811 1842 4.209703 TCGTGACAAAAGTACATTTCGTCC 59.790 41.667 16.34 10.65 0.00 4.79
1812 1843 4.451557 GTGACAAAAGTACATTTCGTCCG 58.548 43.478 16.34 1.92 0.00 4.79
1822 1862 2.289195 ACATTTCGTCCGGTTAGCAAGA 60.289 45.455 0.00 0.00 0.00 3.02
1894 1934 3.703556 TGCAAAGAATGAACTGGTTTCCA 59.296 39.130 0.00 0.00 32.58 3.53
1929 1969 4.439016 CGTAGCTACTTCTCCAAAGAGGAC 60.439 50.000 21.20 0.00 43.07 3.85
1973 2017 6.961359 TCATAAGTGTATTCTTTGTCGTGG 57.039 37.500 0.00 0.00 0.00 4.94
2001 2045 3.543680 CCTGACAATACTACAGGGGTG 57.456 52.381 0.00 0.00 44.96 4.61
2003 2047 3.369471 CCTGACAATACTACAGGGGTGTG 60.369 52.174 0.00 0.00 44.96 3.82
2036 2080 6.656632 ACAATCATATCTACCGATCAGTGT 57.343 37.500 0.00 0.00 0.00 3.55
2039 2083 3.826729 TCATATCTACCGATCAGTGTGGG 59.173 47.826 0.00 0.00 0.00 4.61
2058 2102 2.957006 GGGATAAGAGTACGCTCAAGGA 59.043 50.000 0.00 0.00 44.00 3.36
2061 2105 5.453480 GGGATAAGAGTACGCTCAAGGAATT 60.453 44.000 0.00 0.00 44.00 2.17
2080 2124 9.462606 AAGGAATTATATAAATTTAGGGCCTCG 57.537 33.333 10.74 0.00 0.00 4.63
2081 2125 8.832735 AGGAATTATATAAATTTAGGGCCTCGA 58.167 33.333 10.74 0.00 0.00 4.04
2082 2126 9.628500 GGAATTATATAAATTTAGGGCCTCGAT 57.372 33.333 10.74 1.78 0.00 3.59
2084 2128 8.980481 ATTATATAAATTTAGGGCCTCGATGG 57.020 34.615 10.74 0.00 39.35 3.51
2097 2141 2.605257 CTCGATGGGGGAGGTAATACA 58.395 52.381 0.00 0.00 0.00 2.29
2103 2147 5.337330 CGATGGGGGAGGTAATACATTACTC 60.337 48.000 10.97 7.26 41.71 2.59
2104 2148 4.898268 TGGGGGAGGTAATACATTACTCA 58.102 43.478 10.97 0.00 41.71 3.41
2105 2149 5.482580 TGGGGGAGGTAATACATTACTCAT 58.517 41.667 10.97 0.22 41.71 2.90
2106 2150 5.309543 TGGGGGAGGTAATACATTACTCATG 59.690 44.000 10.97 0.00 41.71 3.07
2110 2154 6.706270 GGGAGGTAATACATTACTCATGTGTG 59.294 42.308 10.62 0.00 46.37 3.82
2111 2155 7.272978 GGAGGTAATACATTACTCATGTGTGT 58.727 38.462 10.62 3.10 46.37 3.72
2116 2160 9.755064 GTAATACATTACTCATGTGTGTTGTTC 57.245 33.333 17.20 7.52 46.37 3.18
2123 2167 3.544684 TCATGTGTGTTGTTCTTGCTCT 58.455 40.909 0.00 0.00 0.00 4.09
2129 2173 1.065401 TGTTGTTCTTGCTCTTTGGCG 59.935 47.619 0.00 0.00 34.52 5.69
2143 2187 5.987347 GCTCTTTGGCGTAGGTTACAATATA 59.013 40.000 0.00 0.00 0.00 0.86
2144 2188 6.480981 GCTCTTTGGCGTAGGTTACAATATAA 59.519 38.462 0.00 0.00 0.00 0.98
2152 2196 7.924947 GGCGTAGGTTACAATATAAGAGAGTTT 59.075 37.037 0.00 0.00 0.00 2.66
2165 2209 9.995003 ATATAAGAGAGTTTAATTCTCAGCCTG 57.005 33.333 17.52 0.00 42.79 4.85
2177 2221 0.545309 TCAGCCTGTTGCCCTACTCT 60.545 55.000 0.00 0.00 42.71 3.24
2178 2222 0.107945 CAGCCTGTTGCCCTACTCTC 60.108 60.000 0.00 0.00 42.71 3.20
2179 2223 1.153549 GCCTGTTGCCCTACTCTCG 60.154 63.158 0.00 0.00 0.00 4.04
2180 2224 1.517832 CCTGTTGCCCTACTCTCGG 59.482 63.158 0.00 0.00 0.00 4.63
2185 2229 0.822164 TTGCCCTACTCTCGGCTTAC 59.178 55.000 0.00 0.00 45.90 2.34
2187 2231 1.041437 GCCCTACTCTCGGCTTACAT 58.959 55.000 0.00 0.00 42.21 2.29
2194 2238 3.090037 ACTCTCGGCTTACATACAGTGT 58.910 45.455 0.00 0.00 44.95 3.55
2195 2239 3.119459 ACTCTCGGCTTACATACAGTGTG 60.119 47.826 5.88 0.00 42.24 3.82
2200 2244 2.009774 GCTTACATACAGTGTGCCAGG 58.990 52.381 5.88 0.00 42.24 4.45
2201 2245 2.354704 GCTTACATACAGTGTGCCAGGA 60.355 50.000 5.88 0.00 42.24 3.86
2202 2246 3.525537 CTTACATACAGTGTGCCAGGAG 58.474 50.000 5.88 0.00 42.24 3.69
2203 2247 0.036010 ACATACAGTGTGCCAGGAGC 60.036 55.000 5.88 0.00 40.28 4.70
2204 2248 0.745845 CATACAGTGTGCCAGGAGCC 60.746 60.000 5.88 0.00 42.71 4.70
2205 2249 1.200760 ATACAGTGTGCCAGGAGCCA 61.201 55.000 5.88 0.00 42.71 4.75
2206 2250 1.200760 TACAGTGTGCCAGGAGCCAT 61.201 55.000 5.88 0.00 42.71 4.40
2207 2251 1.200760 ACAGTGTGCCAGGAGCCATA 61.201 55.000 0.00 0.00 42.71 2.74
2208 2252 0.035152 CAGTGTGCCAGGAGCCATAA 60.035 55.000 0.00 0.00 42.71 1.90
2209 2253 0.921896 AGTGTGCCAGGAGCCATAAT 59.078 50.000 0.00 0.00 42.71 1.28
2210 2254 1.027357 GTGTGCCAGGAGCCATAATG 58.973 55.000 0.00 0.00 42.71 1.90
2211 2255 0.106569 TGTGCCAGGAGCCATAATGG 60.107 55.000 0.00 0.00 42.71 3.16
2212 2256 0.825010 GTGCCAGGAGCCATAATGGG 60.825 60.000 0.00 0.00 42.71 4.00
2229 2273 9.857656 CCATAATGGGCTGATATAAGTGATATT 57.142 33.333 0.00 0.00 32.67 1.28
2235 2279 9.271921 TGGGCTGATATAAGTGATATTGATAGT 57.728 33.333 0.00 0.00 30.34 2.12
2246 2290 9.896645 AAGTGATATTGATAGTAGCCATAATGG 57.103 33.333 0.00 0.00 41.55 3.16
2247 2291 8.489489 AGTGATATTGATAGTAGCCATAATGGG 58.511 37.037 0.00 0.00 38.19 4.00
2264 2308 9.857656 CCATAATGGGCTGATATAAGTGATATT 57.142 33.333 0.00 0.00 32.67 1.28
2270 2314 9.271921 TGGGCTGATATAAGTGATATTGATAGT 57.728 33.333 0.00 0.00 30.34 2.12
2271 2315 9.757227 GGGCTGATATAAGTGATATTGATAGTC 57.243 37.037 0.00 0.00 30.34 2.59
2279 2323 9.783081 ATAAGTGATATTGATAGTCACATGCAA 57.217 29.630 7.39 0.00 43.51 4.08
2280 2324 7.725818 AGTGATATTGATAGTCACATGCAAG 57.274 36.000 7.39 0.00 43.51 4.01
2281 2325 7.503549 AGTGATATTGATAGTCACATGCAAGA 58.496 34.615 0.00 0.00 43.51 3.02
2282 2326 7.440556 AGTGATATTGATAGTCACATGCAAGAC 59.559 37.037 8.71 8.71 43.51 3.01
2283 2327 6.707608 TGATATTGATAGTCACATGCAAGACC 59.292 38.462 12.08 1.17 35.38 3.85
2284 2328 2.892374 TGATAGTCACATGCAAGACCG 58.108 47.619 12.08 0.00 35.38 4.79
2285 2329 2.495669 TGATAGTCACATGCAAGACCGA 59.504 45.455 12.08 3.75 35.38 4.69
2286 2330 2.363788 TAGTCACATGCAAGACCGAC 57.636 50.000 12.08 7.85 35.38 4.79
2287 2331 0.681733 AGTCACATGCAAGACCGACT 59.318 50.000 12.08 9.62 35.38 4.18
2288 2332 0.792640 GTCACATGCAAGACCGACTG 59.207 55.000 0.00 0.00 0.00 3.51
2289 2333 0.392706 TCACATGCAAGACCGACTGT 59.607 50.000 0.00 0.00 0.00 3.55
2290 2334 1.202639 TCACATGCAAGACCGACTGTT 60.203 47.619 0.00 0.00 0.00 3.16
2291 2335 1.069703 CACATGCAAGACCGACTGTTG 60.070 52.381 0.00 0.00 0.00 3.33
2292 2336 1.202639 ACATGCAAGACCGACTGTTGA 60.203 47.619 0.00 0.00 0.00 3.18
2293 2337 2.079158 CATGCAAGACCGACTGTTGAT 58.921 47.619 0.00 0.00 0.00 2.57
2294 2338 1.511850 TGCAAGACCGACTGTTGATG 58.488 50.000 0.00 0.00 0.00 3.07
2295 2339 1.069978 TGCAAGACCGACTGTTGATGA 59.930 47.619 0.00 0.00 0.00 2.92
2296 2340 2.143122 GCAAGACCGACTGTTGATGAA 58.857 47.619 0.00 0.00 0.00 2.57
2297 2341 2.744202 GCAAGACCGACTGTTGATGAAT 59.256 45.455 0.00 0.00 0.00 2.57
2298 2342 3.932710 GCAAGACCGACTGTTGATGAATA 59.067 43.478 0.00 0.00 0.00 1.75
2299 2343 4.572389 GCAAGACCGACTGTTGATGAATAT 59.428 41.667 0.00 0.00 0.00 1.28
2300 2344 5.065218 GCAAGACCGACTGTTGATGAATATT 59.935 40.000 0.00 0.00 0.00 1.28
2301 2345 6.257849 GCAAGACCGACTGTTGATGAATATTA 59.742 38.462 0.00 0.00 0.00 0.98
2302 2346 7.041780 GCAAGACCGACTGTTGATGAATATTAT 60.042 37.037 0.00 0.00 0.00 1.28
2303 2347 8.830580 CAAGACCGACTGTTGATGAATATTATT 58.169 33.333 0.00 0.00 0.00 1.40
2305 2349 9.477484 AGACCGACTGTTGATGAATATTATTAC 57.523 33.333 0.00 0.00 0.00 1.89
2306 2350 8.603242 ACCGACTGTTGATGAATATTATTACC 57.397 34.615 0.00 0.00 0.00 2.85
2307 2351 7.660208 ACCGACTGTTGATGAATATTATTACCC 59.340 37.037 0.00 0.00 0.00 3.69
2308 2352 7.119262 CCGACTGTTGATGAATATTATTACCCC 59.881 40.741 0.00 0.00 0.00 4.95
2309 2353 7.119262 CGACTGTTGATGAATATTATTACCCCC 59.881 40.741 0.00 0.00 0.00 5.40
2310 2354 8.057246 ACTGTTGATGAATATTATTACCCCCT 57.943 34.615 0.00 0.00 0.00 4.79
2311 2355 8.511126 ACTGTTGATGAATATTATTACCCCCTT 58.489 33.333 0.00 0.00 0.00 3.95
2312 2356 8.934023 TGTTGATGAATATTATTACCCCCTTC 57.066 34.615 0.00 0.00 0.00 3.46
2313 2357 8.506921 TGTTGATGAATATTATTACCCCCTTCA 58.493 33.333 0.00 0.00 0.00 3.02
2314 2358 9.533831 GTTGATGAATATTATTACCCCCTTCAT 57.466 33.333 0.00 0.00 35.27 2.57
2319 2363 9.944079 TGAATATTATTACCCCCTTCATTTCAA 57.056 29.630 0.00 0.00 0.00 2.69
2327 2371 9.951866 ATTACCCCCTTCATTTCAAAATATAGT 57.048 29.630 0.00 0.00 0.00 2.12
2329 2373 8.762481 ACCCCCTTCATTTCAAAATATAGTAC 57.238 34.615 0.00 0.00 0.00 2.73
2330 2374 7.501225 ACCCCCTTCATTTCAAAATATAGTACG 59.499 37.037 0.00 0.00 0.00 3.67
2331 2375 7.360361 CCCCTTCATTTCAAAATATAGTACGC 58.640 38.462 0.00 0.00 0.00 4.42
2332 2376 7.360361 CCCTTCATTTCAAAATATAGTACGCC 58.640 38.462 0.00 0.00 0.00 5.68
2333 2377 7.360361 CCTTCATTTCAAAATATAGTACGCCC 58.640 38.462 0.00 0.00 0.00 6.13
2334 2378 6.533819 TCATTTCAAAATATAGTACGCCCG 57.466 37.500 0.00 0.00 0.00 6.13
2335 2379 6.050432 TCATTTCAAAATATAGTACGCCCGT 58.950 36.000 0.00 0.00 0.00 5.28
2336 2380 5.721876 TTTCAAAATATAGTACGCCCGTG 57.278 39.130 3.22 0.00 0.00 4.94
2337 2381 3.125316 TCAAAATATAGTACGCCCGTGC 58.875 45.455 3.22 1.84 0.00 5.34
2338 2382 3.128349 CAAAATATAGTACGCCCGTGCT 58.872 45.455 15.20 15.20 43.22 4.40
2339 2383 3.464111 AAATATAGTACGCCCGTGCTT 57.536 42.857 15.97 7.53 41.18 3.91
2340 2384 3.464111 AATATAGTACGCCCGTGCTTT 57.536 42.857 15.97 11.11 41.18 3.51
2341 2385 2.497107 TATAGTACGCCCGTGCTTTC 57.503 50.000 15.97 0.00 41.18 2.62
2342 2386 0.179092 ATAGTACGCCCGTGCTTTCC 60.179 55.000 15.97 0.00 41.18 3.13
2343 2387 2.546645 TAGTACGCCCGTGCTTTCCG 62.547 60.000 15.97 0.00 41.18 4.30
2344 2388 3.682885 TACGCCCGTGCTTTCCGA 61.683 61.111 3.22 0.00 34.43 4.55
2345 2389 3.636313 TACGCCCGTGCTTTCCGAG 62.636 63.158 3.22 0.00 34.43 4.63
2347 2391 4.699522 GCCCGTGCTTTCCGAGGT 62.700 66.667 0.00 0.00 33.53 3.85
2348 2392 2.434359 CCCGTGCTTTCCGAGGTC 60.434 66.667 0.00 0.00 0.00 3.85
2349 2393 2.434359 CCGTGCTTTCCGAGGTCC 60.434 66.667 0.00 0.00 0.00 4.46
2350 2394 2.342279 CGTGCTTTCCGAGGTCCA 59.658 61.111 0.00 0.00 0.00 4.02
2351 2395 1.301401 CGTGCTTTCCGAGGTCCAA 60.301 57.895 0.00 0.00 0.00 3.53
2352 2396 0.673644 CGTGCTTTCCGAGGTCCAAT 60.674 55.000 0.00 0.00 0.00 3.16
2353 2397 1.534729 GTGCTTTCCGAGGTCCAATT 58.465 50.000 0.00 0.00 0.00 2.32
2354 2398 1.886542 GTGCTTTCCGAGGTCCAATTT 59.113 47.619 0.00 0.00 0.00 1.82
2355 2399 2.296190 GTGCTTTCCGAGGTCCAATTTT 59.704 45.455 0.00 0.00 0.00 1.82
2356 2400 2.295909 TGCTTTCCGAGGTCCAATTTTG 59.704 45.455 0.00 0.00 0.00 2.44
2357 2401 2.556622 GCTTTCCGAGGTCCAATTTTGA 59.443 45.455 0.00 0.00 0.00 2.69
2358 2402 3.611766 GCTTTCCGAGGTCCAATTTTGAC 60.612 47.826 0.00 0.00 0.00 3.18
2359 2403 2.194201 TCCGAGGTCCAATTTTGACC 57.806 50.000 13.75 13.75 39.18 4.02
2360 2404 1.422024 TCCGAGGTCCAATTTTGACCA 59.578 47.619 20.67 3.17 41.22 4.02
2361 2405 2.041081 TCCGAGGTCCAATTTTGACCAT 59.959 45.455 20.67 9.75 41.22 3.55
2362 2406 3.264706 TCCGAGGTCCAATTTTGACCATA 59.735 43.478 20.67 5.52 41.22 2.74
2363 2407 4.013728 CCGAGGTCCAATTTTGACCATAA 58.986 43.478 20.67 0.00 41.22 1.90
2364 2408 4.461081 CCGAGGTCCAATTTTGACCATAAA 59.539 41.667 20.67 0.00 41.22 1.40
2365 2409 5.127031 CCGAGGTCCAATTTTGACCATAAAT 59.873 40.000 20.67 5.00 41.22 1.40
2366 2410 6.350949 CCGAGGTCCAATTTTGACCATAAATT 60.351 38.462 20.67 4.43 41.22 1.82
2367 2411 7.096551 CGAGGTCCAATTTTGACCATAAATTT 58.903 34.615 20.67 0.00 41.22 1.82
2368 2412 8.247562 CGAGGTCCAATTTTGACCATAAATTTA 58.752 33.333 20.67 0.00 41.22 1.40
2369 2413 9.936759 GAGGTCCAATTTTGACCATAAATTTAA 57.063 29.630 20.67 0.00 41.22 1.52
2379 2423 9.834628 TTTGACCATAAATTTAATCAACGAGAC 57.165 29.630 16.49 0.00 0.00 3.36
2380 2424 7.981142 TGACCATAAATTTAATCAACGAGACC 58.019 34.615 1.21 0.00 0.00 3.85
2381 2425 7.608376 TGACCATAAATTTAATCAACGAGACCA 59.392 33.333 1.21 0.00 0.00 4.02
2382 2426 8.343168 ACCATAAATTTAATCAACGAGACCAA 57.657 30.769 1.21 0.00 0.00 3.67
2383 2427 8.966868 ACCATAAATTTAATCAACGAGACCAAT 58.033 29.630 1.21 0.00 0.00 3.16
2384 2428 9.801873 CCATAAATTTAATCAACGAGACCAATT 57.198 29.630 1.21 0.00 0.00 2.32
2386 2430 7.581011 AAATTTAATCAACGAGACCAATTGC 57.419 32.000 0.00 0.00 0.00 3.56
2387 2431 2.900122 AATCAACGAGACCAATTGCG 57.100 45.000 0.00 0.47 0.00 4.85
2388 2432 1.086696 ATCAACGAGACCAATTGCGG 58.913 50.000 0.00 0.00 0.00 5.69
2389 2433 1.154225 CAACGAGACCAATTGCGGC 60.154 57.895 0.00 0.00 0.00 6.53
2390 2434 1.599518 AACGAGACCAATTGCGGCA 60.600 52.632 0.00 0.00 0.00 5.69
2391 2435 1.577328 AACGAGACCAATTGCGGCAG 61.577 55.000 1.67 0.00 0.00 4.85
2392 2436 2.753966 CGAGACCAATTGCGGCAGG 61.754 63.158 1.67 3.77 0.00 4.85
2393 2437 1.377202 GAGACCAATTGCGGCAGGA 60.377 57.895 13.08 0.00 0.00 3.86
2394 2438 1.372087 GAGACCAATTGCGGCAGGAG 61.372 60.000 13.08 2.64 0.00 3.69
2395 2439 1.377202 GACCAATTGCGGCAGGAGA 60.377 57.895 13.08 0.00 0.00 3.71
2396 2440 0.960364 GACCAATTGCGGCAGGAGAA 60.960 55.000 13.08 0.00 0.00 2.87
2397 2441 0.539438 ACCAATTGCGGCAGGAGAAA 60.539 50.000 13.08 0.00 0.00 2.52
2398 2442 0.602562 CCAATTGCGGCAGGAGAAAA 59.397 50.000 1.67 0.00 0.00 2.29
2399 2443 1.000731 CCAATTGCGGCAGGAGAAAAA 59.999 47.619 1.67 0.00 0.00 1.94
2451 2495 9.855021 ATACAAATTCACTGGTATAACTTTTGC 57.145 29.630 0.00 0.00 0.00 3.68
2452 2496 7.951591 ACAAATTCACTGGTATAACTTTTGCT 58.048 30.769 0.00 0.00 0.00 3.91
2453 2497 8.421002 ACAAATTCACTGGTATAACTTTTGCTT 58.579 29.630 0.00 0.00 0.00 3.91
2454 2498 8.915654 CAAATTCACTGGTATAACTTTTGCTTC 58.084 33.333 0.00 0.00 0.00 3.86
2455 2499 6.569179 TTCACTGGTATAACTTTTGCTTCC 57.431 37.500 0.00 0.00 0.00 3.46
2456 2500 4.693566 TCACTGGTATAACTTTTGCTTCCG 59.306 41.667 0.00 0.00 0.00 4.30
2457 2501 3.439129 ACTGGTATAACTTTTGCTTCCGC 59.561 43.478 0.00 0.00 0.00 5.54
2458 2502 2.750712 TGGTATAACTTTTGCTTCCGCC 59.249 45.455 0.00 0.00 34.43 6.13
2459 2503 2.223180 GGTATAACTTTTGCTTCCGCCG 60.223 50.000 0.00 0.00 34.43 6.46
2460 2504 0.170339 ATAACTTTTGCTTCCGCCGC 59.830 50.000 0.00 0.00 34.43 6.53
2461 2505 1.167155 TAACTTTTGCTTCCGCCGCA 61.167 50.000 0.00 0.00 35.22 5.69
2462 2506 2.126734 CTTTTGCTTCCGCCGCAG 60.127 61.111 0.00 0.00 38.80 5.18
2463 2507 2.904866 TTTTGCTTCCGCCGCAGT 60.905 55.556 0.00 0.00 38.80 4.40
2464 2508 2.786564 CTTTTGCTTCCGCCGCAGTC 62.787 60.000 0.00 0.00 38.80 3.51
2475 2519 2.354188 CGCAGTCGGTGTCGTTGA 60.354 61.111 0.00 0.00 37.69 3.18
2476 2520 1.733041 CGCAGTCGGTGTCGTTGAT 60.733 57.895 0.00 0.00 37.69 2.57
2477 2521 1.282248 CGCAGTCGGTGTCGTTGATT 61.282 55.000 0.00 0.00 37.69 2.57
2478 2522 1.705256 GCAGTCGGTGTCGTTGATTA 58.295 50.000 0.00 0.00 37.69 1.75
2479 2523 2.063266 GCAGTCGGTGTCGTTGATTAA 58.937 47.619 0.00 0.00 37.69 1.40
2480 2524 2.477375 GCAGTCGGTGTCGTTGATTAAA 59.523 45.455 0.00 0.00 37.69 1.52
2481 2525 3.124636 GCAGTCGGTGTCGTTGATTAAAT 59.875 43.478 0.00 0.00 37.69 1.40
2482 2526 4.378046 GCAGTCGGTGTCGTTGATTAAATT 60.378 41.667 0.00 0.00 37.69 1.82
2483 2527 5.685841 CAGTCGGTGTCGTTGATTAAATTT 58.314 37.500 0.00 0.00 37.69 1.82
2484 2528 6.619018 GCAGTCGGTGTCGTTGATTAAATTTA 60.619 38.462 0.00 0.00 37.69 1.40
2485 2529 7.461107 CAGTCGGTGTCGTTGATTAAATTTAT 58.539 34.615 0.00 0.00 37.69 1.40
2486 2530 7.425309 CAGTCGGTGTCGTTGATTAAATTTATG 59.575 37.037 0.00 0.00 37.69 1.90
2487 2531 6.685403 GTCGGTGTCGTTGATTAAATTTATGG 59.315 38.462 0.00 0.00 37.69 2.74
2488 2532 6.372103 TCGGTGTCGTTGATTAAATTTATGGT 59.628 34.615 0.00 0.00 37.69 3.55
2489 2533 6.685403 CGGTGTCGTTGATTAAATTTATGGTC 59.315 38.462 0.00 0.00 0.00 4.02
2490 2534 7.531716 GGTGTCGTTGATTAAATTTATGGTCA 58.468 34.615 0.00 2.14 0.00 4.02
2491 2535 8.024285 GGTGTCGTTGATTAAATTTATGGTCAA 58.976 33.333 13.07 13.07 0.00 3.18
2492 2536 9.400638 GTGTCGTTGATTAAATTTATGGTCAAA 57.599 29.630 16.35 6.10 0.00 2.69
2493 2537 9.619316 TGTCGTTGATTAAATTTATGGTCAAAG 57.381 29.630 16.35 17.15 0.00 2.77
2494 2538 9.620660 GTCGTTGATTAAATTTATGGTCAAAGT 57.379 29.630 20.32 0.00 0.00 2.66
2501 2545 9.995003 ATTAAATTTATGGTCAAAGTTGAAGCA 57.005 25.926 0.00 0.00 39.21 3.91
2502 2546 7.713764 AAATTTATGGTCAAAGTTGAAGCAC 57.286 32.000 0.00 0.00 39.21 4.40
2503 2547 4.481930 TTATGGTCAAAGTTGAAGCACG 57.518 40.909 0.00 0.00 39.21 5.34
2504 2548 1.021202 TGGTCAAAGTTGAAGCACGG 58.979 50.000 0.00 0.00 39.21 4.94
2505 2549 0.310854 GGTCAAAGTTGAAGCACGGG 59.689 55.000 0.00 0.00 39.21 5.28
2506 2550 1.305201 GTCAAAGTTGAAGCACGGGA 58.695 50.000 0.00 0.00 39.21 5.14
2507 2551 1.673920 GTCAAAGTTGAAGCACGGGAA 59.326 47.619 0.00 0.00 39.21 3.97
2508 2552 2.293399 GTCAAAGTTGAAGCACGGGAAT 59.707 45.455 0.00 0.00 39.21 3.01
2509 2553 3.500680 GTCAAAGTTGAAGCACGGGAATA 59.499 43.478 0.00 0.00 39.21 1.75
2510 2554 3.751175 TCAAAGTTGAAGCACGGGAATAG 59.249 43.478 0.00 0.00 33.55 1.73
2511 2555 3.695830 AAGTTGAAGCACGGGAATAGA 57.304 42.857 0.00 0.00 0.00 1.98
2512 2556 3.252974 AGTTGAAGCACGGGAATAGAG 57.747 47.619 0.00 0.00 0.00 2.43
2513 2557 2.832129 AGTTGAAGCACGGGAATAGAGA 59.168 45.455 0.00 0.00 0.00 3.10
2514 2558 3.260884 AGTTGAAGCACGGGAATAGAGAA 59.739 43.478 0.00 0.00 0.00 2.87
2515 2559 3.973206 TGAAGCACGGGAATAGAGAAA 57.027 42.857 0.00 0.00 0.00 2.52
2516 2560 3.861840 TGAAGCACGGGAATAGAGAAAG 58.138 45.455 0.00 0.00 0.00 2.62
2517 2561 2.317530 AGCACGGGAATAGAGAAAGC 57.682 50.000 0.00 0.00 0.00 3.51
2518 2562 1.555075 AGCACGGGAATAGAGAAAGCA 59.445 47.619 0.00 0.00 0.00 3.91
2519 2563 1.666189 GCACGGGAATAGAGAAAGCAC 59.334 52.381 0.00 0.00 0.00 4.40
2520 2564 2.678190 GCACGGGAATAGAGAAAGCACT 60.678 50.000 0.00 0.00 0.00 4.40
2521 2565 3.430374 GCACGGGAATAGAGAAAGCACTA 60.430 47.826 0.00 0.00 0.00 2.74
2522 2566 4.740934 GCACGGGAATAGAGAAAGCACTAT 60.741 45.833 0.00 0.00 30.52 2.12
2523 2567 5.509163 GCACGGGAATAGAGAAAGCACTATA 60.509 44.000 0.00 0.00 29.39 1.31
2524 2568 6.692486 CACGGGAATAGAGAAAGCACTATAT 58.308 40.000 0.00 0.00 29.39 0.86
2525 2569 7.155328 CACGGGAATAGAGAAAGCACTATATT 58.845 38.462 0.00 0.00 37.12 1.28
2526 2570 7.657761 CACGGGAATAGAGAAAGCACTATATTT 59.342 37.037 0.00 0.00 35.39 1.40
2527 2571 8.211629 ACGGGAATAGAGAAAGCACTATATTTT 58.788 33.333 0.00 0.00 35.39 1.82
2528 2572 8.499162 CGGGAATAGAGAAAGCACTATATTTTG 58.501 37.037 0.00 0.00 35.39 2.44
2529 2573 9.561069 GGGAATAGAGAAAGCACTATATTTTGA 57.439 33.333 0.00 0.00 35.39 2.69
2535 2579 8.237267 AGAGAAAGCACTATATTTTGAAAACGG 58.763 33.333 0.00 0.00 0.00 4.44
2536 2580 8.106247 AGAAAGCACTATATTTTGAAAACGGA 57.894 30.769 0.00 0.00 0.00 4.69
2537 2581 8.237267 AGAAAGCACTATATTTTGAAAACGGAG 58.763 33.333 0.00 0.00 0.00 4.63
2538 2582 6.436843 AGCACTATATTTTGAAAACGGAGG 57.563 37.500 0.00 0.00 0.00 4.30
2539 2583 5.357032 AGCACTATATTTTGAAAACGGAGGG 59.643 40.000 0.00 0.00 0.00 4.30
2540 2584 5.355910 GCACTATATTTTGAAAACGGAGGGA 59.644 40.000 0.00 0.00 0.00 4.20
2541 2585 6.458342 GCACTATATTTTGAAAACGGAGGGAG 60.458 42.308 0.00 0.00 0.00 4.30
2542 2586 6.598064 CACTATATTTTGAAAACGGAGGGAGT 59.402 38.462 0.00 0.00 0.00 3.85
2543 2587 7.767198 CACTATATTTTGAAAACGGAGGGAGTA 59.233 37.037 0.00 0.00 0.00 2.59
2544 2588 6.997239 ATATTTTGAAAACGGAGGGAGTAC 57.003 37.500 0.00 0.00 0.00 2.73
2545 2589 4.426736 TTTTGAAAACGGAGGGAGTACT 57.573 40.909 0.00 0.00 0.00 2.73
2546 2590 5.549742 TTTTGAAAACGGAGGGAGTACTA 57.450 39.130 0.00 0.00 0.00 1.82
2547 2591 5.750352 TTTGAAAACGGAGGGAGTACTAT 57.250 39.130 0.00 0.00 0.00 2.12
2548 2592 4.996788 TGAAAACGGAGGGAGTACTATC 57.003 45.455 0.00 0.00 0.00 2.08
2549 2593 3.379372 TGAAAACGGAGGGAGTACTATCG 59.621 47.826 0.00 0.00 0.00 2.92
2550 2594 1.978454 AACGGAGGGAGTACTATCGG 58.022 55.000 0.00 2.02 0.00 4.18
2551 2595 0.842635 ACGGAGGGAGTACTATCGGT 59.157 55.000 0.00 2.66 0.00 4.69
2552 2596 2.050144 ACGGAGGGAGTACTATCGGTA 58.950 52.381 11.42 0.00 0.00 4.02
2553 2597 2.439507 ACGGAGGGAGTACTATCGGTAA 59.560 50.000 11.42 0.00 31.56 2.85
2554 2598 3.073650 ACGGAGGGAGTACTATCGGTAAT 59.926 47.826 11.42 0.00 31.56 1.89
2555 2599 4.077822 CGGAGGGAGTACTATCGGTAATT 58.922 47.826 0.00 0.00 31.56 1.40
2556 2600 4.082895 CGGAGGGAGTACTATCGGTAATTG 60.083 50.000 0.00 0.00 31.56 2.32
2557 2601 4.321824 GGAGGGAGTACTATCGGTAATTGC 60.322 50.000 0.00 0.00 31.56 3.56
2558 2602 3.577415 AGGGAGTACTATCGGTAATTGCC 59.423 47.826 1.83 1.83 32.10 4.52
2559 2603 3.322828 GGGAGTACTATCGGTAATTGCCA 59.677 47.826 13.39 0.49 32.18 4.92
2560 2604 4.020485 GGGAGTACTATCGGTAATTGCCAT 60.020 45.833 13.39 7.84 32.18 4.40
2561 2605 5.186409 GGGAGTACTATCGGTAATTGCCATA 59.814 44.000 13.39 8.51 32.18 2.74
2562 2606 6.127140 GGGAGTACTATCGGTAATTGCCATAT 60.127 42.308 13.39 7.86 32.18 1.78
2563 2607 7.328737 GGAGTACTATCGGTAATTGCCATATT 58.671 38.462 13.39 6.72 31.56 1.28
2564 2608 7.822822 GGAGTACTATCGGTAATTGCCATATTT 59.177 37.037 13.39 0.00 31.56 1.40
2565 2609 9.865321 GAGTACTATCGGTAATTGCCATATTTA 57.135 33.333 13.39 0.00 31.56 1.40
2582 2626 9.988350 GCCATATTTAATTAGATTATGTCACGG 57.012 33.333 0.00 0.00 0.00 4.94
2593 2637 7.496529 AGATTATGTCACGGTTGATTAATGG 57.503 36.000 0.00 0.00 33.11 3.16
2594 2638 5.493133 TTATGTCACGGTTGATTAATGGC 57.507 39.130 0.00 0.00 33.11 4.40
2595 2639 2.784347 TGTCACGGTTGATTAATGGCA 58.216 42.857 0.00 0.00 33.11 4.92
2596 2640 2.746904 TGTCACGGTTGATTAATGGCAG 59.253 45.455 0.00 0.00 33.11 4.85
2597 2641 2.747446 GTCACGGTTGATTAATGGCAGT 59.253 45.455 0.00 0.00 33.11 4.40
2598 2642 3.936453 GTCACGGTTGATTAATGGCAGTA 59.064 43.478 0.00 0.00 33.11 2.74
2599 2643 4.393680 GTCACGGTTGATTAATGGCAGTAA 59.606 41.667 10.06 10.06 33.11 2.24
2600 2644 5.065988 GTCACGGTTGATTAATGGCAGTAAT 59.934 40.000 19.03 19.03 33.11 1.89
2601 2645 5.065859 TCACGGTTGATTAATGGCAGTAATG 59.934 40.000 23.25 11.67 0.00 1.90
2602 2646 5.065859 CACGGTTGATTAATGGCAGTAATGA 59.934 40.000 23.25 13.49 0.00 2.57
2603 2647 5.650266 ACGGTTGATTAATGGCAGTAATGAA 59.350 36.000 23.25 18.45 0.00 2.57
2604 2648 6.321181 ACGGTTGATTAATGGCAGTAATGAAT 59.679 34.615 23.25 5.45 0.00 2.57
2605 2649 7.147915 ACGGTTGATTAATGGCAGTAATGAATT 60.148 33.333 23.25 8.40 0.00 2.17
2606 2650 7.379529 CGGTTGATTAATGGCAGTAATGAATTC 59.620 37.037 23.25 15.57 0.00 2.17
2607 2651 8.196771 GGTTGATTAATGGCAGTAATGAATTCA 58.803 33.333 23.25 11.26 0.00 2.57
2608 2652 9.754382 GTTGATTAATGGCAGTAATGAATTCAT 57.246 29.630 23.25 15.36 38.41 2.57
2610 2654 9.752961 TGATTAATGGCAGTAATGAATTCATTG 57.247 29.630 33.94 23.34 45.34 2.82
2611 2655 9.754382 GATTAATGGCAGTAATGAATTCATTGT 57.246 29.630 33.94 22.22 45.34 2.71
2612 2656 8.929827 TTAATGGCAGTAATGAATTCATTGTG 57.070 30.769 33.94 29.63 45.34 3.33
2613 2657 5.327616 TGGCAGTAATGAATTCATTGTGG 57.672 39.130 33.94 24.63 45.34 4.17
2614 2658 4.160065 TGGCAGTAATGAATTCATTGTGGG 59.840 41.667 33.94 23.27 45.34 4.61
2615 2659 4.441913 GGCAGTAATGAATTCATTGTGGGG 60.442 45.833 33.94 21.94 45.34 4.96
2616 2660 4.160252 GCAGTAATGAATTCATTGTGGGGT 59.840 41.667 33.94 15.61 45.34 4.95
2617 2661 5.679638 GCAGTAATGAATTCATTGTGGGGTC 60.680 44.000 33.94 18.15 45.34 4.46
2618 2662 4.956075 AGTAATGAATTCATTGTGGGGTCC 59.044 41.667 33.94 16.03 45.34 4.46
2619 2663 2.230130 TGAATTCATTGTGGGGTCCC 57.770 50.000 3.38 0.00 0.00 4.46
2620 2664 1.102978 GAATTCATTGTGGGGTCCCG 58.897 55.000 0.48 0.00 39.42 5.14
2621 2665 0.701731 AATTCATTGTGGGGTCCCGA 59.298 50.000 0.48 0.00 39.42 5.14
2622 2666 0.926293 ATTCATTGTGGGGTCCCGAT 59.074 50.000 0.48 0.00 39.42 4.18
2623 2667 1.585895 TTCATTGTGGGGTCCCGATA 58.414 50.000 0.48 0.00 39.42 2.92
2624 2668 1.814429 TCATTGTGGGGTCCCGATAT 58.186 50.000 0.48 0.00 39.42 1.63
2625 2669 1.697432 TCATTGTGGGGTCCCGATATC 59.303 52.381 0.48 0.00 39.42 1.63
2626 2670 1.699634 CATTGTGGGGTCCCGATATCT 59.300 52.381 0.48 0.00 39.42 1.98
2627 2671 1.887797 TTGTGGGGTCCCGATATCTT 58.112 50.000 0.48 0.00 39.42 2.40
2628 2672 2.779429 TGTGGGGTCCCGATATCTTA 57.221 50.000 0.48 0.00 39.42 2.10
2629 2673 2.605257 TGTGGGGTCCCGATATCTTAG 58.395 52.381 0.48 0.00 39.42 2.18
2630 2674 1.900486 GTGGGGTCCCGATATCTTAGG 59.100 57.143 0.48 0.00 39.42 2.69
2631 2675 1.790779 TGGGGTCCCGATATCTTAGGA 59.209 52.381 0.48 1.73 39.42 2.94
2632 2676 2.177734 GGGGTCCCGATATCTTAGGAC 58.822 57.143 20.26 20.26 46.65 3.85
2634 2678 2.633199 GTCCCGATATCTTAGGACGC 57.367 55.000 16.21 1.41 39.47 5.19
2635 2679 2.161030 GTCCCGATATCTTAGGACGCT 58.839 52.381 16.21 0.00 39.47 5.07
2636 2680 2.095161 GTCCCGATATCTTAGGACGCTG 60.095 54.545 16.21 0.00 39.47 5.18
2637 2681 1.402984 CCCGATATCTTAGGACGCTGC 60.403 57.143 0.34 0.00 0.00 5.25
2638 2682 1.402984 CCGATATCTTAGGACGCTGCC 60.403 57.143 0.34 0.00 0.00 4.85
2639 2683 1.269723 CGATATCTTAGGACGCTGCCA 59.730 52.381 0.34 0.00 0.00 4.92
2640 2684 2.288213 CGATATCTTAGGACGCTGCCAA 60.288 50.000 0.34 0.00 0.00 4.52
2641 2685 2.596904 TATCTTAGGACGCTGCCAAC 57.403 50.000 0.00 0.00 0.00 3.77
2642 2686 0.905357 ATCTTAGGACGCTGCCAACT 59.095 50.000 0.00 0.00 0.00 3.16
2643 2687 0.037326 TCTTAGGACGCTGCCAACTG 60.037 55.000 0.00 0.00 0.00 3.16
2644 2688 1.639298 CTTAGGACGCTGCCAACTGC 61.639 60.000 0.00 0.00 41.77 4.40
2655 2699 1.604604 GCCAACTGCAAGGTAAGTGA 58.395 50.000 0.00 0.00 39.30 3.41
2656 2700 1.266989 GCCAACTGCAAGGTAAGTGAC 59.733 52.381 0.00 0.00 39.30 3.67
2657 2701 2.851195 CCAACTGCAAGGTAAGTGACT 58.149 47.619 0.00 0.00 39.30 3.41
2658 2702 2.549754 CCAACTGCAAGGTAAGTGACTG 59.450 50.000 0.00 0.00 39.30 3.51
2659 2703 1.884235 ACTGCAAGGTAAGTGACTGC 58.116 50.000 0.00 0.00 39.30 4.40
2660 2704 1.140852 ACTGCAAGGTAAGTGACTGCA 59.859 47.619 0.00 0.00 39.30 4.41
2661 2705 1.532868 CTGCAAGGTAAGTGACTGCAC 59.467 52.381 0.00 0.00 45.49 4.57
2662 2706 0.875059 GCAAGGTAAGTGACTGCACC 59.125 55.000 8.23 8.23 46.32 5.01
2663 2707 1.543429 GCAAGGTAAGTGACTGCACCT 60.543 52.381 12.10 12.10 46.32 4.00
2664 2708 2.146342 CAAGGTAAGTGACTGCACCTG 58.854 52.381 17.06 9.54 46.32 4.00
2665 2709 1.424638 AGGTAAGTGACTGCACCTGT 58.575 50.000 15.97 0.00 46.32 4.00
2666 2710 1.344763 AGGTAAGTGACTGCACCTGTC 59.655 52.381 15.97 0.00 46.32 3.51
2667 2711 1.070134 GGTAAGTGACTGCACCTGTCA 59.930 52.381 8.87 3.31 46.32 3.58
2668 2712 2.289694 GGTAAGTGACTGCACCTGTCAT 60.290 50.000 10.12 0.00 46.32 3.06
2669 2713 1.888215 AAGTGACTGCACCTGTCATG 58.112 50.000 10.12 0.00 46.32 3.07
2670 2714 1.051008 AGTGACTGCACCTGTCATGA 58.949 50.000 10.12 0.00 46.32 3.07
2671 2715 1.627329 AGTGACTGCACCTGTCATGAT 59.373 47.619 10.12 0.00 46.32 2.45
2672 2716 1.736126 GTGACTGCACCTGTCATGATG 59.264 52.381 10.12 0.00 42.43 3.07
2673 2717 1.624813 TGACTGCACCTGTCATGATGA 59.375 47.619 0.00 0.00 37.40 2.92
2674 2718 4.715616 GTGACTGCACCTGTCATGATGAC 61.716 52.174 18.25 18.25 42.43 3.06
2684 2728 2.477825 GTCATGATGACGATCCACAGG 58.522 52.381 10.11 0.00 37.67 4.00
2685 2729 2.110578 TCATGATGACGATCCACAGGT 58.889 47.619 0.00 0.00 0.00 4.00
2686 2730 3.068165 GTCATGATGACGATCCACAGGTA 59.932 47.826 10.11 0.00 37.67 3.08
2687 2731 3.897505 TCATGATGACGATCCACAGGTAT 59.102 43.478 0.00 0.00 0.00 2.73
2688 2732 4.344968 TCATGATGACGATCCACAGGTATT 59.655 41.667 0.00 0.00 0.00 1.89
2689 2733 4.058721 TGATGACGATCCACAGGTATTG 57.941 45.455 0.00 0.00 0.00 1.90
2690 2734 3.450817 TGATGACGATCCACAGGTATTGT 59.549 43.478 0.00 0.00 41.94 2.71
2691 2735 3.520290 TGACGATCCACAGGTATTGTC 57.480 47.619 0.00 0.00 38.16 3.18
2692 2736 2.167693 TGACGATCCACAGGTATTGTCC 59.832 50.000 0.00 0.00 38.16 4.02
2693 2737 2.167693 GACGATCCACAGGTATTGTCCA 59.832 50.000 0.00 0.00 38.16 4.02
2694 2738 2.168521 ACGATCCACAGGTATTGTCCAG 59.831 50.000 0.00 0.00 38.16 3.86
2695 2739 2.565841 GATCCACAGGTATTGTCCAGC 58.434 52.381 0.00 0.00 38.16 4.85
2696 2740 1.357137 TCCACAGGTATTGTCCAGCA 58.643 50.000 0.00 0.00 38.16 4.41
2697 2741 1.915489 TCCACAGGTATTGTCCAGCAT 59.085 47.619 0.00 0.00 38.16 3.79
2698 2742 2.019249 CCACAGGTATTGTCCAGCATG 58.981 52.381 0.00 0.00 38.16 4.06
2709 2753 2.438975 CAGCATGGGGTGTGCGAT 60.439 61.111 0.00 0.00 46.86 4.58
2710 2754 2.048023 CAGCATGGGGTGTGCGATT 61.048 57.895 0.00 0.00 46.86 3.34
2711 2755 1.750399 AGCATGGGGTGTGCGATTC 60.750 57.895 0.00 0.00 46.86 2.52
2712 2756 2.045708 GCATGGGGTGTGCGATTCA 61.046 57.895 0.00 0.00 32.29 2.57
2713 2757 1.594194 GCATGGGGTGTGCGATTCAA 61.594 55.000 0.00 0.00 32.29 2.69
2714 2758 0.452987 CATGGGGTGTGCGATTCAAG 59.547 55.000 0.00 0.00 0.00 3.02
2715 2759 0.038166 ATGGGGTGTGCGATTCAAGT 59.962 50.000 0.00 0.00 0.00 3.16
2716 2760 0.687920 TGGGGTGTGCGATTCAAGTA 59.312 50.000 0.00 0.00 0.00 2.24
2717 2761 1.280710 TGGGGTGTGCGATTCAAGTAT 59.719 47.619 0.00 0.00 0.00 2.12
2718 2762 2.502130 TGGGGTGTGCGATTCAAGTATA 59.498 45.455 0.00 0.00 0.00 1.47
2719 2763 3.131396 GGGGTGTGCGATTCAAGTATAG 58.869 50.000 0.00 0.00 0.00 1.31
2720 2764 3.181469 GGGGTGTGCGATTCAAGTATAGA 60.181 47.826 0.00 0.00 0.00 1.98
2721 2765 3.802685 GGGTGTGCGATTCAAGTATAGAC 59.197 47.826 0.00 0.00 0.00 2.59
2722 2766 4.430007 GGTGTGCGATTCAAGTATAGACA 58.570 43.478 0.00 0.00 0.00 3.41
2723 2767 5.050490 GGTGTGCGATTCAAGTATAGACAT 58.950 41.667 0.00 0.00 0.00 3.06
2724 2768 5.050769 GGTGTGCGATTCAAGTATAGACATG 60.051 44.000 0.00 0.00 0.00 3.21
2725 2769 5.520288 GTGTGCGATTCAAGTATAGACATGT 59.480 40.000 0.00 0.00 0.00 3.21
2726 2770 5.519927 TGTGCGATTCAAGTATAGACATGTG 59.480 40.000 1.15 0.00 0.00 3.21
2727 2771 5.049828 TGCGATTCAAGTATAGACATGTGG 58.950 41.667 1.15 0.00 0.00 4.17
2728 2772 4.084328 GCGATTCAAGTATAGACATGTGGC 60.084 45.833 1.15 0.00 0.00 5.01
2729 2773 5.292765 CGATTCAAGTATAGACATGTGGCT 58.707 41.667 1.15 0.00 37.13 4.75
2730 2774 5.403766 CGATTCAAGTATAGACATGTGGCTC 59.596 44.000 1.15 0.00 33.72 4.70
2731 2775 5.675684 TTCAAGTATAGACATGTGGCTCA 57.324 39.130 1.15 0.00 33.72 4.26
2732 2776 5.876651 TCAAGTATAGACATGTGGCTCAT 57.123 39.130 1.15 0.00 33.72 2.90
2733 2777 6.239217 TCAAGTATAGACATGTGGCTCATT 57.761 37.500 1.15 0.00 33.72 2.57
2734 2778 7.360113 TCAAGTATAGACATGTGGCTCATTA 57.640 36.000 1.15 0.00 33.72 1.90
2735 2779 7.791029 TCAAGTATAGACATGTGGCTCATTAA 58.209 34.615 1.15 0.00 33.72 1.40
2736 2780 8.432013 TCAAGTATAGACATGTGGCTCATTAAT 58.568 33.333 1.15 0.00 33.72 1.40
2737 2781 8.501580 CAAGTATAGACATGTGGCTCATTAATG 58.498 37.037 1.15 9.29 33.72 1.90
2738 2782 7.164122 AGTATAGACATGTGGCTCATTAATGG 58.836 38.462 15.36 7.47 33.72 3.16
2739 2783 3.559069 AGACATGTGGCTCATTAATGGG 58.441 45.455 15.36 13.38 34.09 4.00
2740 2784 3.053395 AGACATGTGGCTCATTAATGGGT 60.053 43.478 16.63 0.00 34.09 4.51
2741 2785 4.165950 AGACATGTGGCTCATTAATGGGTA 59.834 41.667 16.63 3.95 34.09 3.69
2742 2786 4.464008 ACATGTGGCTCATTAATGGGTAG 58.536 43.478 16.63 7.62 34.09 3.18
2743 2787 2.930950 TGTGGCTCATTAATGGGTAGC 58.069 47.619 16.63 16.15 0.00 3.58
2744 2788 1.873591 GTGGCTCATTAATGGGTAGCG 59.126 52.381 16.63 0.55 33.96 4.26
2745 2789 1.765904 TGGCTCATTAATGGGTAGCGA 59.234 47.619 16.63 11.76 33.96 4.93
2746 2790 2.224281 TGGCTCATTAATGGGTAGCGAG 60.224 50.000 16.63 5.57 33.96 5.03
2747 2791 2.224305 GGCTCATTAATGGGTAGCGAGT 60.224 50.000 16.63 0.00 33.96 4.18
2748 2792 3.006537 GGCTCATTAATGGGTAGCGAGTA 59.993 47.826 16.63 0.00 33.96 2.59
2749 2793 4.322801 GGCTCATTAATGGGTAGCGAGTAT 60.323 45.833 16.63 0.00 33.96 2.12
2750 2794 5.238583 GCTCATTAATGGGTAGCGAGTATT 58.761 41.667 16.63 0.00 0.00 1.89
2751 2795 5.348997 GCTCATTAATGGGTAGCGAGTATTC 59.651 44.000 16.63 0.00 0.00 1.75
2752 2796 5.790593 TCATTAATGGGTAGCGAGTATTCC 58.209 41.667 15.36 0.00 0.00 3.01
2753 2797 4.612264 TTAATGGGTAGCGAGTATTCCC 57.388 45.455 0.00 0.00 38.68 3.97
2754 2798 1.349067 ATGGGTAGCGAGTATTCCCC 58.651 55.000 0.00 0.00 37.52 4.81
2755 2799 0.263765 TGGGTAGCGAGTATTCCCCT 59.736 55.000 0.00 0.00 37.52 4.79
2756 2800 0.967662 GGGTAGCGAGTATTCCCCTC 59.032 60.000 0.00 0.00 32.66 4.30
2757 2801 1.700955 GGTAGCGAGTATTCCCCTCA 58.299 55.000 0.00 0.00 0.00 3.86
2758 2802 2.037144 GGTAGCGAGTATTCCCCTCAA 58.963 52.381 0.00 0.00 0.00 3.02
2759 2803 2.433239 GGTAGCGAGTATTCCCCTCAAA 59.567 50.000 0.00 0.00 0.00 2.69
2760 2804 3.071167 GGTAGCGAGTATTCCCCTCAAAT 59.929 47.826 0.00 0.00 0.00 2.32
2761 2805 3.199880 AGCGAGTATTCCCCTCAAATG 57.800 47.619 0.00 0.00 0.00 2.32
2762 2806 2.158755 AGCGAGTATTCCCCTCAAATGG 60.159 50.000 0.00 0.00 0.00 3.16
2763 2807 2.851195 CGAGTATTCCCCTCAAATGGG 58.149 52.381 0.00 0.00 46.68 4.00
2764 2808 2.172717 CGAGTATTCCCCTCAAATGGGT 59.827 50.000 0.00 0.00 45.70 4.51
2765 2809 3.744530 CGAGTATTCCCCTCAAATGGGTC 60.745 52.174 0.00 0.00 45.70 4.46
2766 2810 3.459969 GAGTATTCCCCTCAAATGGGTCT 59.540 47.826 0.00 0.00 45.70 3.85
2767 2811 2.834638 ATTCCCCTCAAATGGGTCTG 57.165 50.000 0.00 0.00 45.70 3.51
2768 2812 0.704076 TTCCCCTCAAATGGGTCTGG 59.296 55.000 0.00 0.00 45.70 3.86
2769 2813 0.477597 TCCCCTCAAATGGGTCTGGT 60.478 55.000 0.00 0.00 45.70 4.00
2770 2814 0.323725 CCCCTCAAATGGGTCTGGTG 60.324 60.000 0.00 0.00 45.70 4.17
2771 2815 0.405585 CCCTCAAATGGGTCTGGTGT 59.594 55.000 0.00 0.00 42.25 4.16
2772 2816 1.203050 CCCTCAAATGGGTCTGGTGTT 60.203 52.381 0.00 0.00 42.25 3.32
2773 2817 2.597455 CCTCAAATGGGTCTGGTGTTT 58.403 47.619 0.00 0.00 0.00 2.83
2774 2818 2.965147 CCTCAAATGGGTCTGGTGTTTT 59.035 45.455 0.00 0.00 0.00 2.43
2775 2819 3.243839 CCTCAAATGGGTCTGGTGTTTTG 60.244 47.826 0.00 0.00 0.00 2.44
2776 2820 2.102252 TCAAATGGGTCTGGTGTTTTGC 59.898 45.455 0.00 0.00 0.00 3.68
2777 2821 1.047801 AATGGGTCTGGTGTTTTGCC 58.952 50.000 0.00 0.00 0.00 4.52
2778 2822 0.831711 ATGGGTCTGGTGTTTTGCCC 60.832 55.000 0.00 0.00 36.73 5.36
2779 2823 2.207229 GGGTCTGGTGTTTTGCCCC 61.207 63.158 0.00 0.00 0.00 5.80
2780 2824 1.152546 GGTCTGGTGTTTTGCCCCT 60.153 57.895 0.00 0.00 0.00 4.79
2781 2825 0.759060 GGTCTGGTGTTTTGCCCCTT 60.759 55.000 0.00 0.00 0.00 3.95
2782 2826 0.389025 GTCTGGTGTTTTGCCCCTTG 59.611 55.000 0.00 0.00 0.00 3.61
2783 2827 0.260230 TCTGGTGTTTTGCCCCTTGA 59.740 50.000 0.00 0.00 0.00 3.02
2784 2828 0.389025 CTGGTGTTTTGCCCCTTGAC 59.611 55.000 0.00 0.00 0.00 3.18
2785 2829 1.045911 TGGTGTTTTGCCCCTTGACC 61.046 55.000 0.00 0.00 0.00 4.02
2786 2830 1.745890 GTGTTTTGCCCCTTGACCC 59.254 57.895 0.00 0.00 0.00 4.46
2787 2831 1.045911 GTGTTTTGCCCCTTGACCCA 61.046 55.000 0.00 0.00 0.00 4.51
2788 2832 0.105246 TGTTTTGCCCCTTGACCCAT 60.105 50.000 0.00 0.00 0.00 4.00
2789 2833 1.055849 GTTTTGCCCCTTGACCCATT 58.944 50.000 0.00 0.00 0.00 3.16
2790 2834 1.055040 TTTTGCCCCTTGACCCATTG 58.945 50.000 0.00 0.00 0.00 2.82
2791 2835 0.105246 TTTGCCCCTTGACCCATTGT 60.105 50.000 0.00 0.00 0.00 2.71
2792 2836 0.541764 TTGCCCCTTGACCCATTGTC 60.542 55.000 0.00 0.00 44.72 3.18
2793 2837 1.682344 GCCCCTTGACCCATTGTCC 60.682 63.158 0.00 0.00 43.78 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 116 0.652592 CGATCATCTTGAACCGGCAC 59.347 55.000 0.00 0.00 0.00 5.01
158 159 0.392461 GGCGCAACTTCCTCACCATA 60.392 55.000 10.83 0.00 0.00 2.74
267 268 2.081161 GCCCTCTCCATCCCCATGT 61.081 63.158 0.00 0.00 0.00 3.21
269 270 2.451294 GGCCCTCTCCATCCCCAT 60.451 66.667 0.00 0.00 0.00 4.00
518 524 8.264347 TGCTCCTATATTTGCATATAAATCGGA 58.736 33.333 0.78 4.59 32.79 4.55
618 624 8.122952 CGAACAGACTCTTCAAATTTAAACTGT 58.877 33.333 0.00 0.00 36.63 3.55
619 625 7.587757 CCGAACAGACTCTTCAAATTTAAACTG 59.412 37.037 0.00 0.00 0.00 3.16
620 626 7.497909 TCCGAACAGACTCTTCAAATTTAAACT 59.502 33.333 0.00 0.00 0.00 2.66
621 627 7.586664 GTCCGAACAGACTCTTCAAATTTAAAC 59.413 37.037 0.00 0.00 33.79 2.01
622 628 7.517734 CGTCCGAACAGACTCTTCAAATTTAAA 60.518 37.037 0.00 0.00 34.46 1.52
623 629 6.073980 CGTCCGAACAGACTCTTCAAATTTAA 60.074 38.462 0.00 0.00 34.46 1.52
624 630 5.404366 CGTCCGAACAGACTCTTCAAATTTA 59.596 40.000 0.00 0.00 34.46 1.40
625 631 4.211374 CGTCCGAACAGACTCTTCAAATTT 59.789 41.667 0.00 0.00 34.46 1.82
626 632 3.741344 CGTCCGAACAGACTCTTCAAATT 59.259 43.478 0.00 0.00 34.46 1.82
627 633 3.318017 CGTCCGAACAGACTCTTCAAAT 58.682 45.455 0.00 0.00 34.46 2.32
628 634 2.739292 CGTCCGAACAGACTCTTCAAA 58.261 47.619 0.00 0.00 34.46 2.69
629 635 1.602165 GCGTCCGAACAGACTCTTCAA 60.602 52.381 0.00 0.00 34.46 2.69
630 636 0.039437 GCGTCCGAACAGACTCTTCA 60.039 55.000 0.00 0.00 34.46 3.02
631 637 0.039437 TGCGTCCGAACAGACTCTTC 60.039 55.000 0.00 0.00 34.46 2.87
632 638 0.039074 CTGCGTCCGAACAGACTCTT 60.039 55.000 0.00 0.00 35.90 2.85
633 639 1.173444 ACTGCGTCCGAACAGACTCT 61.173 55.000 6.67 0.00 37.35 3.24
634 640 0.318784 AACTGCGTCCGAACAGACTC 60.319 55.000 6.67 0.00 37.35 3.36
635 641 0.104304 AAACTGCGTCCGAACAGACT 59.896 50.000 6.67 0.00 37.35 3.24
636 642 1.774639 TAAACTGCGTCCGAACAGAC 58.225 50.000 6.67 0.00 37.35 3.51
637 643 2.512485 TTAAACTGCGTCCGAACAGA 57.488 45.000 6.67 0.00 37.35 3.41
638 644 3.185594 TGATTTAAACTGCGTCCGAACAG 59.814 43.478 0.00 0.00 39.86 3.16
639 645 3.132160 TGATTTAAACTGCGTCCGAACA 58.868 40.909 0.00 0.00 0.00 3.18
640 646 3.799137 TGATTTAAACTGCGTCCGAAC 57.201 42.857 0.00 0.00 0.00 3.95
641 647 5.180492 AGAATTGATTTAAACTGCGTCCGAA 59.820 36.000 0.00 0.00 0.00 4.30
642 648 4.693566 AGAATTGATTTAAACTGCGTCCGA 59.306 37.500 0.00 0.00 0.00 4.55
643 649 4.969816 AGAATTGATTTAAACTGCGTCCG 58.030 39.130 0.00 0.00 0.00 4.79
644 650 8.736751 TTTAAGAATTGATTTAAACTGCGTCC 57.263 30.769 0.00 0.00 0.00 4.79
647 653 9.464248 GCATTTTAAGAATTGATTTAAACTGCG 57.536 29.630 16.76 0.00 41.32 5.18
648 654 9.464248 CGCATTTTAAGAATTGATTTAAACTGC 57.536 29.630 19.07 19.07 43.92 4.40
655 661 8.220434 CGGAAAACGCATTTTAAGAATTGATTT 58.780 29.630 0.00 0.00 38.17 2.17
656 662 7.728895 CGGAAAACGCATTTTAAGAATTGATT 58.271 30.769 0.00 0.00 38.17 2.57
657 663 7.276953 CGGAAAACGCATTTTAAGAATTGAT 57.723 32.000 0.00 0.00 38.17 2.57
658 664 6.683090 CGGAAAACGCATTTTAAGAATTGA 57.317 33.333 0.00 0.00 38.17 2.57
666 672 7.892890 TTTCCAGTTAACGGAAAACGCATTTTA 60.893 33.333 27.40 12.12 46.88 1.52
667 673 7.120154 TTTCCAGTTAACGGAAAACGCATTTT 61.120 34.615 27.40 0.00 46.88 1.82
668 674 5.679127 TTTCCAGTTAACGGAAAACGCATTT 60.679 36.000 27.40 0.00 46.88 2.32
669 675 4.202030 TTTCCAGTTAACGGAAAACGCATT 60.202 37.500 27.40 0.00 46.88 3.56
670 676 3.315749 TTTCCAGTTAACGGAAAACGCAT 59.684 39.130 27.40 0.00 46.88 4.73
671 677 2.681848 TTTCCAGTTAACGGAAAACGCA 59.318 40.909 27.40 14.56 46.88 5.24
672 678 3.337301 TTTCCAGTTAACGGAAAACGC 57.663 42.857 27.40 0.00 46.88 4.84
677 683 3.004944 GGTGCATTTTCCAGTTAACGGAA 59.995 43.478 20.67 20.67 40.81 4.30
678 684 2.554893 GGTGCATTTTCCAGTTAACGGA 59.445 45.455 7.37 10.69 0.00 4.69
679 685 2.667171 CGGTGCATTTTCCAGTTAACGG 60.667 50.000 9.39 9.39 0.00 4.44
680 686 2.224549 TCGGTGCATTTTCCAGTTAACG 59.775 45.455 0.00 0.00 0.00 3.18
681 687 3.907894 TCGGTGCATTTTCCAGTTAAC 57.092 42.857 0.00 0.00 0.00 2.01
682 688 5.010112 TGAATTCGGTGCATTTTCCAGTTAA 59.990 36.000 0.04 0.00 0.00 2.01
683 689 4.520874 TGAATTCGGTGCATTTTCCAGTTA 59.479 37.500 0.04 0.00 0.00 2.24
684 690 3.320541 TGAATTCGGTGCATTTTCCAGTT 59.679 39.130 0.04 0.00 0.00 3.16
685 691 2.890311 TGAATTCGGTGCATTTTCCAGT 59.110 40.909 0.04 0.00 0.00 4.00
686 692 3.057315 ACTGAATTCGGTGCATTTTCCAG 60.057 43.478 19.20 0.00 33.47 3.86
687 693 2.890311 ACTGAATTCGGTGCATTTTCCA 59.110 40.909 19.20 0.00 33.47 3.53
688 694 3.575965 ACTGAATTCGGTGCATTTTCC 57.424 42.857 19.20 0.00 33.47 3.13
689 695 4.553429 CGTAACTGAATTCGGTGCATTTTC 59.447 41.667 20.51 2.10 35.26 2.29
690 696 4.472286 CGTAACTGAATTCGGTGCATTTT 58.528 39.130 20.51 6.49 35.26 1.82
691 697 3.669557 GCGTAACTGAATTCGGTGCATTT 60.670 43.478 20.51 7.20 35.26 2.32
692 698 2.159572 GCGTAACTGAATTCGGTGCATT 60.160 45.455 20.51 7.57 35.26 3.56
693 699 1.396996 GCGTAACTGAATTCGGTGCAT 59.603 47.619 20.51 7.93 35.26 3.96
694 700 0.793861 GCGTAACTGAATTCGGTGCA 59.206 50.000 20.51 9.07 35.26 4.57
695 701 0.247145 CGCGTAACTGAATTCGGTGC 60.247 55.000 20.51 17.37 35.26 5.01
696 702 0.368907 CCGCGTAACTGAATTCGGTG 59.631 55.000 20.51 9.51 35.26 4.94
697 703 0.037975 ACCGCGTAACTGAATTCGGT 60.038 50.000 14.38 14.38 44.32 4.69
698 704 0.368907 CACCGCGTAACTGAATTCGG 59.631 55.000 12.91 12.91 42.24 4.30
699 705 1.065358 ACACCGCGTAACTGAATTCG 58.935 50.000 4.92 0.00 0.00 3.34
700 706 3.061697 CCTTACACCGCGTAACTGAATTC 59.938 47.826 4.92 0.00 35.09 2.17
701 707 2.997986 CCTTACACCGCGTAACTGAATT 59.002 45.455 4.92 0.00 35.09 2.17
702 708 2.613691 CCTTACACCGCGTAACTGAAT 58.386 47.619 4.92 0.00 35.09 2.57
703 709 1.337074 CCCTTACACCGCGTAACTGAA 60.337 52.381 4.92 0.00 35.09 3.02
704 710 0.244450 CCCTTACACCGCGTAACTGA 59.756 55.000 4.92 0.00 35.09 3.41
705 711 0.738412 CCCCTTACACCGCGTAACTG 60.738 60.000 4.92 0.00 35.09 3.16
706 712 1.187567 ACCCCTTACACCGCGTAACT 61.188 55.000 4.92 0.00 35.09 2.24
707 713 0.320683 AACCCCTTACACCGCGTAAC 60.321 55.000 4.92 0.00 35.09 2.50
708 714 0.320596 CAACCCCTTACACCGCGTAA 60.321 55.000 4.92 0.00 37.76 3.18
709 715 1.292860 CAACCCCTTACACCGCGTA 59.707 57.895 4.92 0.00 0.00 4.42
710 716 2.031465 CAACCCCTTACACCGCGT 59.969 61.111 4.92 0.00 0.00 6.01
711 717 2.510064 TAGCAACCCCTTACACCGCG 62.510 60.000 0.00 0.00 0.00 6.46
712 718 0.743345 CTAGCAACCCCTTACACCGC 60.743 60.000 0.00 0.00 0.00 5.68
713 719 0.899720 TCTAGCAACCCCTTACACCG 59.100 55.000 0.00 0.00 0.00 4.94
714 720 2.185387 TCTCTAGCAACCCCTTACACC 58.815 52.381 0.00 0.00 0.00 4.16
715 721 3.798202 CATCTCTAGCAACCCCTTACAC 58.202 50.000 0.00 0.00 0.00 2.90
716 722 2.170607 GCATCTCTAGCAACCCCTTACA 59.829 50.000 0.00 0.00 0.00 2.41
717 723 2.436173 AGCATCTCTAGCAACCCCTTAC 59.564 50.000 0.00 0.00 0.00 2.34
718 724 2.700897 GAGCATCTCTAGCAACCCCTTA 59.299 50.000 0.00 0.00 0.00 2.69
719 725 1.488393 GAGCATCTCTAGCAACCCCTT 59.512 52.381 0.00 0.00 0.00 3.95
720 726 1.127343 GAGCATCTCTAGCAACCCCT 58.873 55.000 0.00 0.00 0.00 4.79
721 727 3.696306 GAGCATCTCTAGCAACCCC 57.304 57.895 0.00 0.00 0.00 4.95
733 739 3.551863 CCACGACTCCAGATTAGAGCATC 60.552 52.174 0.00 0.00 34.56 3.91
734 740 2.363680 CCACGACTCCAGATTAGAGCAT 59.636 50.000 0.00 0.00 34.56 3.79
735 741 1.751351 CCACGACTCCAGATTAGAGCA 59.249 52.381 0.00 0.00 34.56 4.26
736 742 2.025155 TCCACGACTCCAGATTAGAGC 58.975 52.381 0.00 0.00 34.56 4.09
737 743 3.017442 TGTCCACGACTCCAGATTAGAG 58.983 50.000 0.00 0.00 37.39 2.43
738 744 3.081710 TGTCCACGACTCCAGATTAGA 57.918 47.619 0.00 0.00 33.15 2.10
739 745 3.868757 TTGTCCACGACTCCAGATTAG 57.131 47.619 0.00 0.00 33.15 1.73
750 756 1.068417 CCTGTCGGTTTGTCCACGA 59.932 57.895 0.00 0.00 35.57 4.35
751 757 1.959226 CCCTGTCGGTTTGTCCACG 60.959 63.158 0.00 0.00 35.57 4.94
817 835 7.584987 ACATATTATTTACGCTCAGCATTTCC 58.415 34.615 0.00 0.00 0.00 3.13
930 953 3.649073 TGACAGACACCGTATTGTTCAG 58.351 45.455 0.00 0.00 0.00 3.02
935 958 3.026630 ACACTGACAGACACCGTATTG 57.973 47.619 10.08 0.00 0.00 1.90
964 987 3.251972 GTCTGTTTTTCTCCCTTGCTCTG 59.748 47.826 0.00 0.00 0.00 3.35
994 1019 0.388907 CCTTCGGCTGCCATTGTTTG 60.389 55.000 20.29 0.00 0.00 2.93
1181 1206 4.148825 AGATGGGTCTGCCGTCGC 62.149 66.667 0.00 0.00 32.13 5.19
1342 1367 0.537371 ACGGCAGGGAAAAGTTGAGG 60.537 55.000 0.00 0.00 0.00 3.86
1343 1368 0.593128 CACGGCAGGGAAAAGTTGAG 59.407 55.000 0.00 0.00 0.00 3.02
1344 1369 0.181587 TCACGGCAGGGAAAAGTTGA 59.818 50.000 0.00 0.00 0.00 3.18
1346 1371 1.247567 CATCACGGCAGGGAAAAGTT 58.752 50.000 0.00 0.00 30.96 2.66
1347 1372 0.110486 ACATCACGGCAGGGAAAAGT 59.890 50.000 0.00 0.00 30.96 2.66
1349 1374 1.339610 CAAACATCACGGCAGGGAAAA 59.660 47.619 0.00 0.00 30.96 2.29
1353 1380 0.606401 ACTCAAACATCACGGCAGGG 60.606 55.000 0.00 0.00 0.00 4.45
1363 1390 1.247567 CCCGGCTCAAACTCAAACAT 58.752 50.000 0.00 0.00 0.00 2.71
1384 1412 1.079819 AAGACACCGCGACCATGAG 60.080 57.895 8.23 0.00 0.00 2.90
1394 1425 1.864862 CAAGAGCTGCAAGACACCG 59.135 57.895 1.02 0.00 34.07 4.94
1415 1446 1.153188 CATGATGCCTACCCACGCA 60.153 57.895 0.00 0.00 39.79 5.24
1490 1521 4.432741 GCCTCCTCCAACTGGCCC 62.433 72.222 0.00 0.00 39.49 5.80
1632 1663 2.441164 AGCTCTGCCGACCTCGAT 60.441 61.111 0.00 0.00 43.02 3.59
1634 1665 4.200283 GGAGCTCTGCCGACCTCG 62.200 72.222 14.64 0.00 39.44 4.63
1772 1803 2.186160 CGACAGCAACTGGGCAACA 61.186 57.895 0.00 0.00 35.51 3.33
1808 1839 0.796927 GCTGTTCTTGCTAACCGGAC 59.203 55.000 9.46 0.00 0.00 4.79
1809 1840 0.669318 CGCTGTTCTTGCTAACCGGA 60.669 55.000 9.46 0.00 0.00 5.14
1810 1841 0.669318 TCGCTGTTCTTGCTAACCGG 60.669 55.000 0.00 0.00 0.00 5.28
1811 1842 1.359848 ATCGCTGTTCTTGCTAACCG 58.640 50.000 0.00 0.00 0.00 4.44
1812 1843 3.831715 AAATCGCTGTTCTTGCTAACC 57.168 42.857 0.00 0.00 0.00 2.85
1894 1934 1.749634 GTAGCTACGTGGTGTCAGGAT 59.250 52.381 8.40 0.00 33.41 3.24
1995 2039 5.428457 TGATTGTATCTACATTCACACCCCT 59.572 40.000 9.66 0.00 39.94 4.79
2032 2076 2.688958 GAGCGTACTCTTATCCCACACT 59.311 50.000 0.00 0.00 40.03 3.55
2036 2080 2.693591 CCTTGAGCGTACTCTTATCCCA 59.306 50.000 0.00 0.00 43.85 4.37
2058 2102 9.408648 CCATCGAGGCCCTAAATTTATATAATT 57.591 33.333 0.00 0.00 0.00 1.40
2061 2105 6.126594 CCCCATCGAGGCCCTAAATTTATATA 60.127 42.308 0.00 0.00 35.39 0.86
2065 2109 2.107552 CCCCATCGAGGCCCTAAATTTA 59.892 50.000 0.00 0.00 35.39 1.40
2067 2111 0.478507 CCCCATCGAGGCCCTAAATT 59.521 55.000 0.00 0.00 35.39 1.82
2068 2112 1.427072 CCCCCATCGAGGCCCTAAAT 61.427 60.000 0.00 0.00 35.39 1.40
2080 2124 5.546499 TGAGTAATGTATTACCTCCCCCATC 59.454 44.000 10.33 1.85 42.71 3.51
2081 2125 5.482580 TGAGTAATGTATTACCTCCCCCAT 58.517 41.667 10.33 0.00 42.71 4.00
2082 2126 4.898268 TGAGTAATGTATTACCTCCCCCA 58.102 43.478 10.33 0.00 42.71 4.96
2083 2127 5.805728 CATGAGTAATGTATTACCTCCCCC 58.194 45.833 10.33 0.00 42.71 5.40
2097 2141 5.532406 AGCAAGAACAACACACATGAGTAAT 59.468 36.000 0.00 0.00 0.00 1.89
2103 2147 3.976793 AGAGCAAGAACAACACACATG 57.023 42.857 0.00 0.00 0.00 3.21
2104 2148 4.440525 CCAAAGAGCAAGAACAACACACAT 60.441 41.667 0.00 0.00 0.00 3.21
2105 2149 3.119531 CCAAAGAGCAAGAACAACACACA 60.120 43.478 0.00 0.00 0.00 3.72
2106 2150 3.438360 CCAAAGAGCAAGAACAACACAC 58.562 45.455 0.00 0.00 0.00 3.82
2110 2154 1.065551 ACGCCAAAGAGCAAGAACAAC 59.934 47.619 0.00 0.00 0.00 3.32
2111 2155 1.388547 ACGCCAAAGAGCAAGAACAA 58.611 45.000 0.00 0.00 0.00 2.83
2116 2160 1.523758 AACCTACGCCAAAGAGCAAG 58.476 50.000 0.00 0.00 0.00 4.01
2123 2167 7.784037 TCTCTTATATTGTAACCTACGCCAAA 58.216 34.615 0.00 0.00 0.00 3.28
2143 2187 6.120507 ACAGGCTGAGAATTAAACTCTCTT 57.879 37.500 23.66 0.00 40.10 2.85
2144 2188 5.753721 ACAGGCTGAGAATTAAACTCTCT 57.246 39.130 23.66 8.04 40.10 3.10
2152 2196 1.635487 AGGGCAACAGGCTGAGAATTA 59.365 47.619 23.66 0.00 44.01 1.40
2155 2199 0.324943 GTAGGGCAACAGGCTGAGAA 59.675 55.000 23.66 0.00 44.01 2.87
2156 2200 0.545309 AGTAGGGCAACAGGCTGAGA 60.545 55.000 23.66 0.00 44.01 3.27
2162 2206 1.517832 CCGAGAGTAGGGCAACAGG 59.482 63.158 0.00 0.00 39.74 4.00
2177 2221 1.404986 GGCACACTGTATGTAAGCCGA 60.405 52.381 0.00 0.00 40.64 5.54
2178 2222 1.006832 GGCACACTGTATGTAAGCCG 58.993 55.000 0.00 0.00 40.64 5.52
2179 2223 2.009774 CTGGCACACTGTATGTAAGCC 58.990 52.381 0.00 0.00 40.64 4.35
2180 2224 2.009774 CCTGGCACACTGTATGTAAGC 58.990 52.381 0.00 0.00 40.64 3.09
2185 2229 0.745845 GGCTCCTGGCACACTGTATG 60.746 60.000 0.00 0.00 44.01 2.39
2187 2231 1.841103 TGGCTCCTGGCACACTGTA 60.841 57.895 0.00 0.00 44.10 2.74
2195 2239 4.507969 CCCATTATGGCTCCTGGC 57.492 61.111 5.57 0.00 35.79 4.85
2203 2247 9.857656 AATATCACTTATATCAGCCCATTATGG 57.142 33.333 3.85 3.85 31.68 2.74
2209 2253 9.271921 ACTATCAATATCACTTATATCAGCCCA 57.728 33.333 0.00 0.00 30.04 5.36
2220 2264 9.896645 CCATTATGGCTACTATCAATATCACTT 57.103 33.333 0.00 0.00 0.00 3.16
2221 2265 8.489489 CCCATTATGGCTACTATCAATATCACT 58.511 37.037 5.57 0.00 35.79 3.41
2222 2266 8.668510 CCCATTATGGCTACTATCAATATCAC 57.331 38.462 5.57 0.00 35.79 3.06
2238 2282 9.857656 AATATCACTTATATCAGCCCATTATGG 57.142 33.333 3.85 3.85 31.68 2.74
2244 2288 9.271921 ACTATCAATATCACTTATATCAGCCCA 57.728 33.333 0.00 0.00 30.04 5.36
2245 2289 9.757227 GACTATCAATATCACTTATATCAGCCC 57.243 37.037 0.00 0.00 30.04 5.19
2253 2297 9.783081 TTGCATGTGACTATCAATATCACTTAT 57.217 29.630 5.32 0.00 42.65 1.73
2254 2298 9.264719 CTTGCATGTGACTATCAATATCACTTA 57.735 33.333 5.32 0.00 42.65 2.24
2255 2299 7.989170 TCTTGCATGTGACTATCAATATCACTT 59.011 33.333 5.32 0.00 42.65 3.16
2256 2300 7.440556 GTCTTGCATGTGACTATCAATATCACT 59.559 37.037 5.32 0.00 42.65 3.41
2257 2301 7.307632 GGTCTTGCATGTGACTATCAATATCAC 60.308 40.741 12.55 0.00 42.54 3.06
2258 2302 6.707608 GGTCTTGCATGTGACTATCAATATCA 59.292 38.462 12.55 0.00 34.01 2.15
2259 2303 6.128715 CGGTCTTGCATGTGACTATCAATATC 60.129 42.308 12.55 0.00 34.01 1.63
2260 2304 5.698089 CGGTCTTGCATGTGACTATCAATAT 59.302 40.000 12.55 0.00 34.01 1.28
2261 2305 5.049828 CGGTCTTGCATGTGACTATCAATA 58.950 41.667 12.55 0.00 34.01 1.90
2262 2306 3.873361 CGGTCTTGCATGTGACTATCAAT 59.127 43.478 12.55 0.00 34.01 2.57
2263 2307 3.056179 TCGGTCTTGCATGTGACTATCAA 60.056 43.478 12.55 0.00 34.01 2.57
2264 2308 2.495669 TCGGTCTTGCATGTGACTATCA 59.504 45.455 12.55 0.00 34.01 2.15
2265 2309 2.860735 GTCGGTCTTGCATGTGACTATC 59.139 50.000 12.55 3.30 34.01 2.08
2266 2310 2.497675 AGTCGGTCTTGCATGTGACTAT 59.502 45.455 16.86 2.75 35.10 2.12
2267 2311 1.893137 AGTCGGTCTTGCATGTGACTA 59.107 47.619 16.86 5.43 35.10 2.59
2268 2312 0.681733 AGTCGGTCTTGCATGTGACT 59.318 50.000 14.39 14.39 34.01 3.41
2269 2313 0.792640 CAGTCGGTCTTGCATGTGAC 59.207 55.000 11.52 11.52 0.00 3.67
2270 2314 0.392706 ACAGTCGGTCTTGCATGTGA 59.607 50.000 0.00 0.00 0.00 3.58
2271 2315 1.069703 CAACAGTCGGTCTTGCATGTG 60.070 52.381 0.00 0.00 0.00 3.21
2272 2316 1.202639 TCAACAGTCGGTCTTGCATGT 60.203 47.619 0.00 0.00 0.00 3.21
2273 2317 1.511850 TCAACAGTCGGTCTTGCATG 58.488 50.000 0.00 0.00 0.00 4.06
2274 2318 2.079158 CATCAACAGTCGGTCTTGCAT 58.921 47.619 0.00 0.00 0.00 3.96
2275 2319 1.069978 TCATCAACAGTCGGTCTTGCA 59.930 47.619 0.00 0.00 0.00 4.08
2276 2320 1.795768 TCATCAACAGTCGGTCTTGC 58.204 50.000 0.00 0.00 0.00 4.01
2277 2321 6.668541 AATATTCATCAACAGTCGGTCTTG 57.331 37.500 0.00 0.00 0.00 3.02
2278 2322 8.964476 AATAATATTCATCAACAGTCGGTCTT 57.036 30.769 0.00 0.00 0.00 3.01
2279 2323 9.477484 GTAATAATATTCATCAACAGTCGGTCT 57.523 33.333 0.00 0.00 0.00 3.85
2280 2324 8.709646 GGTAATAATATTCATCAACAGTCGGTC 58.290 37.037 0.00 0.00 0.00 4.79
2281 2325 7.660208 GGGTAATAATATTCATCAACAGTCGGT 59.340 37.037 0.00 0.00 0.00 4.69
2282 2326 7.119262 GGGGTAATAATATTCATCAACAGTCGG 59.881 40.741 0.00 0.00 0.00 4.79
2283 2327 7.119262 GGGGGTAATAATATTCATCAACAGTCG 59.881 40.741 0.00 0.00 0.00 4.18
2284 2328 8.164070 AGGGGGTAATAATATTCATCAACAGTC 58.836 37.037 0.00 0.00 0.00 3.51
2285 2329 8.057246 AGGGGGTAATAATATTCATCAACAGT 57.943 34.615 0.00 0.00 0.00 3.55
2286 2330 8.940397 AAGGGGGTAATAATATTCATCAACAG 57.060 34.615 0.00 0.00 0.00 3.16
2287 2331 8.506921 TGAAGGGGGTAATAATATTCATCAACA 58.493 33.333 0.00 0.00 0.00 3.33
2288 2332 8.934023 TGAAGGGGGTAATAATATTCATCAAC 57.066 34.615 0.00 0.00 0.00 3.18
2293 2337 9.944079 TTGAAATGAAGGGGGTAATAATATTCA 57.056 29.630 0.00 0.00 0.00 2.57
2301 2345 9.951866 ACTATATTTTGAAATGAAGGGGGTAAT 57.048 29.630 0.00 0.00 0.00 1.89
2303 2347 9.856162 GTACTATATTTTGAAATGAAGGGGGTA 57.144 33.333 0.00 0.00 0.00 3.69
2304 2348 7.501225 CGTACTATATTTTGAAATGAAGGGGGT 59.499 37.037 0.00 0.00 0.00 4.95
2305 2349 7.521585 GCGTACTATATTTTGAAATGAAGGGGG 60.522 40.741 0.00 0.00 0.00 5.40
2306 2350 7.360361 GCGTACTATATTTTGAAATGAAGGGG 58.640 38.462 0.00 0.00 0.00 4.79
2307 2351 7.360361 GGCGTACTATATTTTGAAATGAAGGG 58.640 38.462 0.00 0.00 0.00 3.95
2308 2352 7.360361 GGGCGTACTATATTTTGAAATGAAGG 58.640 38.462 0.00 0.00 0.00 3.46
2309 2353 7.069569 CGGGCGTACTATATTTTGAAATGAAG 58.930 38.462 0.00 0.28 0.00 3.02
2310 2354 6.539464 ACGGGCGTACTATATTTTGAAATGAA 59.461 34.615 0.00 0.00 0.00 2.57
2311 2355 6.018588 CACGGGCGTACTATATTTTGAAATGA 60.019 38.462 0.00 0.00 0.00 2.57
2312 2356 6.133392 CACGGGCGTACTATATTTTGAAATG 58.867 40.000 0.00 0.00 0.00 2.32
2313 2357 5.277634 GCACGGGCGTACTATATTTTGAAAT 60.278 40.000 0.00 0.00 0.00 2.17
2314 2358 4.034279 GCACGGGCGTACTATATTTTGAAA 59.966 41.667 0.00 0.00 0.00 2.69
2315 2359 3.556775 GCACGGGCGTACTATATTTTGAA 59.443 43.478 0.00 0.00 0.00 2.69
2316 2360 3.125316 GCACGGGCGTACTATATTTTGA 58.875 45.455 0.00 0.00 0.00 2.69
2317 2361 3.515071 GCACGGGCGTACTATATTTTG 57.485 47.619 0.00 0.00 0.00 2.44
2330 2374 4.699522 ACCTCGGAAAGCACGGGC 62.700 66.667 0.00 0.00 41.61 6.13
2331 2375 2.434359 GACCTCGGAAAGCACGGG 60.434 66.667 0.00 0.00 0.00 5.28
2332 2376 2.434359 GGACCTCGGAAAGCACGG 60.434 66.667 0.00 0.00 0.00 4.94
2333 2377 0.673644 ATTGGACCTCGGAAAGCACG 60.674 55.000 0.00 0.00 0.00 5.34
2334 2378 1.534729 AATTGGACCTCGGAAAGCAC 58.465 50.000 0.00 0.00 0.00 4.40
2335 2379 2.286365 AAATTGGACCTCGGAAAGCA 57.714 45.000 0.00 0.00 0.00 3.91
2336 2380 2.556622 TCAAAATTGGACCTCGGAAAGC 59.443 45.455 0.00 0.00 0.00 3.51
2337 2381 4.160736 GTCAAAATTGGACCTCGGAAAG 57.839 45.455 0.00 0.00 0.00 2.62
2353 2397 9.834628 GTCTCGTTGATTAAATTTATGGTCAAA 57.165 29.630 16.35 7.28 0.00 2.69
2354 2398 8.455682 GGTCTCGTTGATTAAATTTATGGTCAA 58.544 33.333 13.07 13.07 0.00 3.18
2355 2399 7.608376 TGGTCTCGTTGATTAAATTTATGGTCA 59.392 33.333 0.00 2.14 0.00 4.02
2356 2400 7.981142 TGGTCTCGTTGATTAAATTTATGGTC 58.019 34.615 0.00 0.00 0.00 4.02
2357 2401 7.931578 TGGTCTCGTTGATTAAATTTATGGT 57.068 32.000 0.00 0.00 0.00 3.55
2358 2402 9.801873 AATTGGTCTCGTTGATTAAATTTATGG 57.198 29.630 0.00 0.00 0.00 2.74
2360 2404 9.301153 GCAATTGGTCTCGTTGATTAAATTTAT 57.699 29.630 7.72 0.00 0.00 1.40
2361 2405 7.483375 CGCAATTGGTCTCGTTGATTAAATTTA 59.517 33.333 7.72 0.00 0.00 1.40
2362 2406 6.307800 CGCAATTGGTCTCGTTGATTAAATTT 59.692 34.615 7.72 0.00 0.00 1.82
2363 2407 5.799936 CGCAATTGGTCTCGTTGATTAAATT 59.200 36.000 7.72 0.00 0.00 1.82
2364 2408 5.331902 CGCAATTGGTCTCGTTGATTAAAT 58.668 37.500 7.72 0.00 0.00 1.40
2365 2409 4.378978 CCGCAATTGGTCTCGTTGATTAAA 60.379 41.667 7.72 0.00 0.00 1.52
2366 2410 3.126171 CCGCAATTGGTCTCGTTGATTAA 59.874 43.478 7.72 0.00 0.00 1.40
2367 2411 2.675844 CCGCAATTGGTCTCGTTGATTA 59.324 45.455 7.72 0.00 0.00 1.75
2368 2412 1.468520 CCGCAATTGGTCTCGTTGATT 59.531 47.619 7.72 0.00 0.00 2.57
2369 2413 1.086696 CCGCAATTGGTCTCGTTGAT 58.913 50.000 7.72 0.00 0.00 2.57
2370 2414 1.573829 GCCGCAATTGGTCTCGTTGA 61.574 55.000 7.72 0.00 0.00 3.18
2371 2415 1.154225 GCCGCAATTGGTCTCGTTG 60.154 57.895 7.72 0.00 0.00 4.10
2372 2416 1.577328 CTGCCGCAATTGGTCTCGTT 61.577 55.000 7.72 0.00 0.00 3.85
2373 2417 2.031919 TGCCGCAATTGGTCTCGT 59.968 55.556 7.72 0.00 0.00 4.18
2374 2418 2.753966 CCTGCCGCAATTGGTCTCG 61.754 63.158 7.72 1.81 0.00 4.04
2375 2419 1.372087 CTCCTGCCGCAATTGGTCTC 61.372 60.000 7.72 0.00 0.00 3.36
2376 2420 1.377725 CTCCTGCCGCAATTGGTCT 60.378 57.895 7.72 0.00 0.00 3.85
2377 2421 0.960364 TTCTCCTGCCGCAATTGGTC 60.960 55.000 7.72 0.00 0.00 4.02
2378 2422 0.539438 TTTCTCCTGCCGCAATTGGT 60.539 50.000 7.72 0.00 0.00 3.67
2379 2423 0.602562 TTTTCTCCTGCCGCAATTGG 59.397 50.000 7.72 0.00 0.00 3.16
2380 2424 2.437200 TTTTTCTCCTGCCGCAATTG 57.563 45.000 0.00 0.00 0.00 2.32
2425 2469 9.855021 GCAAAAGTTATACCAGTGAATTTGTAT 57.145 29.630 0.00 0.00 0.00 2.29
2426 2470 9.073475 AGCAAAAGTTATACCAGTGAATTTGTA 57.927 29.630 0.00 0.00 0.00 2.41
2427 2471 7.951591 AGCAAAAGTTATACCAGTGAATTTGT 58.048 30.769 0.00 0.00 0.00 2.83
2428 2472 8.816640 AAGCAAAAGTTATACCAGTGAATTTG 57.183 30.769 0.00 0.00 0.00 2.32
2429 2473 8.088365 GGAAGCAAAAGTTATACCAGTGAATTT 58.912 33.333 0.00 0.00 0.00 1.82
2430 2474 7.574967 CGGAAGCAAAAGTTATACCAGTGAATT 60.575 37.037 0.00 0.00 0.00 2.17
2431 2475 6.128007 CGGAAGCAAAAGTTATACCAGTGAAT 60.128 38.462 0.00 0.00 0.00 2.57
2432 2476 5.180492 CGGAAGCAAAAGTTATACCAGTGAA 59.820 40.000 0.00 0.00 0.00 3.18
2433 2477 4.693566 CGGAAGCAAAAGTTATACCAGTGA 59.306 41.667 0.00 0.00 0.00 3.41
2434 2478 4.969816 CGGAAGCAAAAGTTATACCAGTG 58.030 43.478 0.00 0.00 0.00 3.66
2458 2502 1.282248 AATCAACGACACCGACTGCG 61.282 55.000 0.00 0.00 39.50 5.18
2459 2503 1.705256 TAATCAACGACACCGACTGC 58.295 50.000 0.00 0.00 39.50 4.40
2460 2504 4.921470 ATTTAATCAACGACACCGACTG 57.079 40.909 0.00 0.00 39.50 3.51
2461 2505 5.934935 AAATTTAATCAACGACACCGACT 57.065 34.783 0.00 0.00 39.50 4.18
2462 2506 6.685403 CCATAAATTTAATCAACGACACCGAC 59.315 38.462 1.21 0.00 39.50 4.79
2463 2507 6.372103 ACCATAAATTTAATCAACGACACCGA 59.628 34.615 1.21 0.00 39.50 4.69
2464 2508 6.548171 ACCATAAATTTAATCAACGACACCG 58.452 36.000 1.21 0.00 42.50 4.94
2465 2509 7.531716 TGACCATAAATTTAATCAACGACACC 58.468 34.615 1.21 0.00 0.00 4.16
2466 2510 8.958175 TTGACCATAAATTTAATCAACGACAC 57.042 30.769 14.31 0.00 0.00 3.67
2467 2511 9.619316 CTTTGACCATAAATTTAATCAACGACA 57.381 29.630 16.49 7.02 0.00 4.35
2468 2512 9.620660 ACTTTGACCATAAATTTAATCAACGAC 57.379 29.630 21.04 5.74 0.00 4.34
2475 2519 9.995003 TGCTTCAACTTTGACCATAAATTTAAT 57.005 25.926 1.21 0.00 36.83 1.40
2476 2520 9.255304 GTGCTTCAACTTTGACCATAAATTTAA 57.745 29.630 1.21 0.00 36.83 1.52
2477 2521 7.593273 CGTGCTTCAACTTTGACCATAAATTTA 59.407 33.333 0.00 0.00 36.83 1.40
2478 2522 6.420604 CGTGCTTCAACTTTGACCATAAATTT 59.579 34.615 0.00 0.00 36.83 1.82
2479 2523 5.920273 CGTGCTTCAACTTTGACCATAAATT 59.080 36.000 0.00 0.00 36.83 1.82
2480 2524 5.460646 CGTGCTTCAACTTTGACCATAAAT 58.539 37.500 0.00 0.00 36.83 1.40
2481 2525 4.261405 CCGTGCTTCAACTTTGACCATAAA 60.261 41.667 0.00 0.00 36.83 1.40
2482 2526 3.252215 CCGTGCTTCAACTTTGACCATAA 59.748 43.478 0.00 0.00 36.83 1.90
2483 2527 2.811431 CCGTGCTTCAACTTTGACCATA 59.189 45.455 0.00 0.00 36.83 2.74
2484 2528 1.608590 CCGTGCTTCAACTTTGACCAT 59.391 47.619 0.00 0.00 36.83 3.55
2485 2529 1.021202 CCGTGCTTCAACTTTGACCA 58.979 50.000 0.00 0.00 36.83 4.02
2486 2530 0.310854 CCCGTGCTTCAACTTTGACC 59.689 55.000 0.00 0.00 36.83 4.02
2487 2531 1.305201 TCCCGTGCTTCAACTTTGAC 58.695 50.000 0.00 0.00 36.83 3.18
2488 2532 2.045561 TTCCCGTGCTTCAACTTTGA 57.954 45.000 0.00 0.00 34.92 2.69
2489 2533 3.751175 TCTATTCCCGTGCTTCAACTTTG 59.249 43.478 0.00 0.00 0.00 2.77
2490 2534 4.003648 CTCTATTCCCGTGCTTCAACTTT 58.996 43.478 0.00 0.00 0.00 2.66
2491 2535 3.260884 TCTCTATTCCCGTGCTTCAACTT 59.739 43.478 0.00 0.00 0.00 2.66
2492 2536 2.832129 TCTCTATTCCCGTGCTTCAACT 59.168 45.455 0.00 0.00 0.00 3.16
2493 2537 3.247006 TCTCTATTCCCGTGCTTCAAC 57.753 47.619 0.00 0.00 0.00 3.18
2494 2538 3.973206 TTCTCTATTCCCGTGCTTCAA 57.027 42.857 0.00 0.00 0.00 2.69
2495 2539 3.861840 CTTTCTCTATTCCCGTGCTTCA 58.138 45.455 0.00 0.00 0.00 3.02
2496 2540 2.609916 GCTTTCTCTATTCCCGTGCTTC 59.390 50.000 0.00 0.00 0.00 3.86
2497 2541 2.027192 TGCTTTCTCTATTCCCGTGCTT 60.027 45.455 0.00 0.00 0.00 3.91
2498 2542 1.555075 TGCTTTCTCTATTCCCGTGCT 59.445 47.619 0.00 0.00 0.00 4.40
2499 2543 1.666189 GTGCTTTCTCTATTCCCGTGC 59.334 52.381 0.00 0.00 0.00 5.34
2500 2544 3.252974 AGTGCTTTCTCTATTCCCGTG 57.747 47.619 0.00 0.00 0.00 4.94
2501 2545 6.919775 ATATAGTGCTTTCTCTATTCCCGT 57.080 37.500 0.00 0.00 32.87 5.28
2502 2546 8.499162 CAAAATATAGTGCTTTCTCTATTCCCG 58.501 37.037 0.00 0.00 32.87 5.14
2503 2547 9.561069 TCAAAATATAGTGCTTTCTCTATTCCC 57.439 33.333 0.00 0.00 32.87 3.97
2509 2553 8.237267 CCGTTTTCAAAATATAGTGCTTTCTCT 58.763 33.333 0.00 0.00 0.00 3.10
2510 2554 8.234546 TCCGTTTTCAAAATATAGTGCTTTCTC 58.765 33.333 0.00 0.00 0.00 2.87
2511 2555 8.106247 TCCGTTTTCAAAATATAGTGCTTTCT 57.894 30.769 0.00 0.00 0.00 2.52
2512 2556 7.484959 CCTCCGTTTTCAAAATATAGTGCTTTC 59.515 37.037 0.00 0.00 0.00 2.62
2513 2557 7.312899 CCTCCGTTTTCAAAATATAGTGCTTT 58.687 34.615 0.00 0.00 0.00 3.51
2514 2558 6.127730 CCCTCCGTTTTCAAAATATAGTGCTT 60.128 38.462 0.00 0.00 0.00 3.91
2515 2559 5.357032 CCCTCCGTTTTCAAAATATAGTGCT 59.643 40.000 0.00 0.00 0.00 4.40
2516 2560 5.355910 TCCCTCCGTTTTCAAAATATAGTGC 59.644 40.000 0.00 0.00 0.00 4.40
2517 2561 6.598064 ACTCCCTCCGTTTTCAAAATATAGTG 59.402 38.462 0.00 0.00 0.00 2.74
2518 2562 6.718294 ACTCCCTCCGTTTTCAAAATATAGT 58.282 36.000 0.00 0.00 0.00 2.12
2519 2563 7.985752 AGTACTCCCTCCGTTTTCAAAATATAG 59.014 37.037 0.00 0.00 0.00 1.31
2520 2564 7.854337 AGTACTCCCTCCGTTTTCAAAATATA 58.146 34.615 0.00 0.00 0.00 0.86
2521 2565 6.718294 AGTACTCCCTCCGTTTTCAAAATAT 58.282 36.000 0.00 0.00 0.00 1.28
2522 2566 6.117975 AGTACTCCCTCCGTTTTCAAAATA 57.882 37.500 0.00 0.00 0.00 1.40
2523 2567 4.981812 AGTACTCCCTCCGTTTTCAAAAT 58.018 39.130 0.00 0.00 0.00 1.82
2524 2568 4.426736 AGTACTCCCTCCGTTTTCAAAA 57.573 40.909 0.00 0.00 0.00 2.44
2525 2569 5.622914 CGATAGTACTCCCTCCGTTTTCAAA 60.623 44.000 0.00 0.00 0.00 2.69
2526 2570 4.142315 CGATAGTACTCCCTCCGTTTTCAA 60.142 45.833 0.00 0.00 0.00 2.69
2527 2571 3.379372 CGATAGTACTCCCTCCGTTTTCA 59.621 47.826 0.00 0.00 0.00 2.69
2528 2572 3.243334 CCGATAGTACTCCCTCCGTTTTC 60.243 52.174 0.00 0.00 0.00 2.29
2529 2573 2.692041 CCGATAGTACTCCCTCCGTTTT 59.308 50.000 0.00 0.00 0.00 2.43
2530 2574 2.305009 CCGATAGTACTCCCTCCGTTT 58.695 52.381 0.00 0.00 0.00 3.60
2531 2575 1.213926 ACCGATAGTACTCCCTCCGTT 59.786 52.381 0.00 0.00 0.00 4.44
2532 2576 0.842635 ACCGATAGTACTCCCTCCGT 59.157 55.000 0.00 0.00 0.00 4.69
2533 2577 2.847327 TACCGATAGTACTCCCTCCG 57.153 55.000 0.00 0.00 0.00 4.63
2534 2578 4.321824 GCAATTACCGATAGTACTCCCTCC 60.322 50.000 0.00 0.00 0.00 4.30
2535 2579 4.321824 GGCAATTACCGATAGTACTCCCTC 60.322 50.000 0.00 0.00 0.00 4.30
2536 2580 3.577415 GGCAATTACCGATAGTACTCCCT 59.423 47.826 0.00 0.00 0.00 4.20
2537 2581 3.322828 TGGCAATTACCGATAGTACTCCC 59.677 47.826 0.00 0.00 0.00 4.30
2538 2582 4.595762 TGGCAATTACCGATAGTACTCC 57.404 45.455 0.00 0.00 0.00 3.85
2539 2583 8.773404 AAATATGGCAATTACCGATAGTACTC 57.227 34.615 0.00 0.00 0.00 2.59
2556 2600 9.988350 CCGTGACATAATCTAATTAAATATGGC 57.012 33.333 12.69 11.06 33.52 4.40
2567 2611 9.051679 CCATTAATCAACCGTGACATAATCTAA 57.948 33.333 0.00 0.00 36.31 2.10
2568 2612 7.172532 GCCATTAATCAACCGTGACATAATCTA 59.827 37.037 0.00 0.00 36.31 1.98
2569 2613 6.017109 GCCATTAATCAACCGTGACATAATCT 60.017 38.462 0.00 0.00 36.31 2.40
2570 2614 6.142817 GCCATTAATCAACCGTGACATAATC 58.857 40.000 0.00 0.00 36.31 1.75
2571 2615 5.592282 TGCCATTAATCAACCGTGACATAAT 59.408 36.000 0.00 0.00 36.31 1.28
2572 2616 4.944317 TGCCATTAATCAACCGTGACATAA 59.056 37.500 0.00 0.00 36.31 1.90
2573 2617 4.518249 TGCCATTAATCAACCGTGACATA 58.482 39.130 0.00 0.00 36.31 2.29
2574 2618 3.351740 TGCCATTAATCAACCGTGACAT 58.648 40.909 0.00 0.00 36.31 3.06
2575 2619 2.746904 CTGCCATTAATCAACCGTGACA 59.253 45.455 0.00 0.00 36.31 3.58
2576 2620 2.747446 ACTGCCATTAATCAACCGTGAC 59.253 45.455 0.00 0.00 36.31 3.67
2577 2621 3.066291 ACTGCCATTAATCAACCGTGA 57.934 42.857 0.00 0.00 38.41 4.35
2578 2622 4.955925 TTACTGCCATTAATCAACCGTG 57.044 40.909 0.00 0.00 0.00 4.94
2579 2623 5.189928 TCATTACTGCCATTAATCAACCGT 58.810 37.500 0.00 0.00 0.00 4.83
2580 2624 5.749596 TCATTACTGCCATTAATCAACCG 57.250 39.130 0.00 0.00 0.00 4.44
2581 2625 8.196771 TGAATTCATTACTGCCATTAATCAACC 58.803 33.333 3.38 0.00 0.00 3.77
2582 2626 9.754382 ATGAATTCATTACTGCCATTAATCAAC 57.246 29.630 15.36 0.00 31.37 3.18
2584 2628 9.752961 CAATGAATTCATTACTGCCATTAATCA 57.247 29.630 28.61 0.00 44.10 2.57
2585 2629 9.754382 ACAATGAATTCATTACTGCCATTAATC 57.246 29.630 28.61 0.00 44.10 1.75
2586 2630 9.537192 CACAATGAATTCATTACTGCCATTAAT 57.463 29.630 28.61 4.22 44.10 1.40
2587 2631 7.980662 CCACAATGAATTCATTACTGCCATTAA 59.019 33.333 28.61 0.00 44.10 1.40
2588 2632 7.417683 CCCACAATGAATTCATTACTGCCATTA 60.418 37.037 28.61 0.00 44.10 1.90
2589 2633 6.342906 CCACAATGAATTCATTACTGCCATT 58.657 36.000 28.61 6.36 44.10 3.16
2590 2634 5.163385 CCCACAATGAATTCATTACTGCCAT 60.163 40.000 28.61 6.29 44.10 4.40
2591 2635 4.160065 CCCACAATGAATTCATTACTGCCA 59.840 41.667 28.61 0.00 44.10 4.92
2592 2636 4.441913 CCCCACAATGAATTCATTACTGCC 60.442 45.833 28.61 0.00 44.10 4.85
2593 2637 4.160252 ACCCCACAATGAATTCATTACTGC 59.840 41.667 28.61 0.00 44.10 4.40
2594 2638 5.163519 GGACCCCACAATGAATTCATTACTG 60.164 44.000 28.61 24.26 44.10 2.74
2595 2639 4.956075 GGACCCCACAATGAATTCATTACT 59.044 41.667 28.61 16.40 44.10 2.24
2596 2640 4.099419 GGGACCCCACAATGAATTCATTAC 59.901 45.833 28.61 10.02 39.05 1.89
2597 2641 4.285863 GGGACCCCACAATGAATTCATTA 58.714 43.478 28.61 0.00 39.05 1.90
2598 2642 3.106827 GGGACCCCACAATGAATTCATT 58.893 45.455 24.83 24.83 40.41 2.57
2599 2643 2.750814 GGGACCCCACAATGAATTCAT 58.249 47.619 15.36 15.36 35.47 2.57
2600 2644 1.615651 CGGGACCCCACAATGAATTCA 60.616 52.381 11.26 11.26 35.37 2.57
2601 2645 1.102978 CGGGACCCCACAATGAATTC 58.897 55.000 4.46 0.00 35.37 2.17
2602 2646 0.701731 TCGGGACCCCACAATGAATT 59.298 50.000 4.46 0.00 35.37 2.17
2603 2647 0.926293 ATCGGGACCCCACAATGAAT 59.074 50.000 4.46 0.00 35.37 2.57
2604 2648 1.585895 TATCGGGACCCCACAATGAA 58.414 50.000 4.46 0.00 35.37 2.57
2605 2649 1.697432 GATATCGGGACCCCACAATGA 59.303 52.381 4.46 0.00 35.37 2.57
2606 2650 1.699634 AGATATCGGGACCCCACAATG 59.300 52.381 4.46 0.00 35.37 2.82
2607 2651 2.118403 AGATATCGGGACCCCACAAT 57.882 50.000 4.46 0.00 35.37 2.71
2608 2652 1.887797 AAGATATCGGGACCCCACAA 58.112 50.000 4.46 0.00 35.37 3.33
2609 2653 2.605257 CTAAGATATCGGGACCCCACA 58.395 52.381 4.46 0.00 35.37 4.17
2610 2654 1.900486 CCTAAGATATCGGGACCCCAC 59.100 57.143 4.46 0.00 35.37 4.61
2611 2655 1.790779 TCCTAAGATATCGGGACCCCA 59.209 52.381 4.46 0.00 35.37 4.96
2612 2656 2.177734 GTCCTAAGATATCGGGACCCC 58.822 57.143 23.10 0.00 41.48 4.95
2613 2657 1.817447 CGTCCTAAGATATCGGGACCC 59.183 57.143 25.36 0.00 43.61 4.46
2614 2658 1.201880 GCGTCCTAAGATATCGGGACC 59.798 57.143 25.36 18.85 43.61 4.46
2615 2659 2.095161 CAGCGTCCTAAGATATCGGGAC 60.095 54.545 23.43 23.43 43.22 4.46
2616 2660 2.160205 CAGCGTCCTAAGATATCGGGA 58.840 52.381 9.85 9.85 0.00 5.14
2617 2661 1.402984 GCAGCGTCCTAAGATATCGGG 60.403 57.143 0.00 1.90 0.00 5.14
2618 2662 1.402984 GGCAGCGTCCTAAGATATCGG 60.403 57.143 0.00 0.00 0.00 4.18
2619 2663 1.269723 TGGCAGCGTCCTAAGATATCG 59.730 52.381 0.00 0.00 0.00 2.92
2620 2664 3.060602 GTTGGCAGCGTCCTAAGATATC 58.939 50.000 0.00 0.00 0.00 1.63
2621 2665 2.700897 AGTTGGCAGCGTCCTAAGATAT 59.299 45.455 0.00 0.00 0.00 1.63
2622 2666 2.108168 AGTTGGCAGCGTCCTAAGATA 58.892 47.619 0.00 0.00 0.00 1.98
2623 2667 0.905357 AGTTGGCAGCGTCCTAAGAT 59.095 50.000 0.00 0.00 0.00 2.40
2624 2668 0.037326 CAGTTGGCAGCGTCCTAAGA 60.037 55.000 0.00 0.00 0.00 2.10
2625 2669 1.639298 GCAGTTGGCAGCGTCCTAAG 61.639 60.000 0.00 0.00 43.97 2.18
2626 2670 1.671054 GCAGTTGGCAGCGTCCTAA 60.671 57.895 0.00 0.00 43.97 2.69
2627 2671 2.047274 GCAGTTGGCAGCGTCCTA 60.047 61.111 0.00 0.00 43.97 2.94
2636 2680 1.266989 GTCACTTACCTTGCAGTTGGC 59.733 52.381 2.90 0.00 45.13 4.52
2637 2681 2.549754 CAGTCACTTACCTTGCAGTTGG 59.450 50.000 0.00 0.00 0.00 3.77
2638 2682 2.031682 GCAGTCACTTACCTTGCAGTTG 60.032 50.000 0.00 0.00 34.99 3.16
2639 2683 2.222027 GCAGTCACTTACCTTGCAGTT 58.778 47.619 0.00 0.00 34.99 3.16
2640 2684 1.140852 TGCAGTCACTTACCTTGCAGT 59.859 47.619 0.00 0.00 39.61 4.40
2641 2685 1.532868 GTGCAGTCACTTACCTTGCAG 59.467 52.381 0.00 0.00 44.48 4.41
2642 2686 1.593196 GTGCAGTCACTTACCTTGCA 58.407 50.000 0.00 0.00 41.97 4.08
2643 2687 0.875059 GGTGCAGTCACTTACCTTGC 59.125 55.000 1.36 0.00 42.72 4.01
2644 2688 2.146342 CAGGTGCAGTCACTTACCTTG 58.854 52.381 7.65 1.86 41.42 3.61
2645 2689 1.768870 ACAGGTGCAGTCACTTACCTT 59.231 47.619 7.65 0.00 41.42 3.50
2646 2690 1.344763 GACAGGTGCAGTCACTTACCT 59.655 52.381 4.89 4.89 44.05 3.08
2647 2691 1.070134 TGACAGGTGCAGTCACTTACC 59.930 52.381 3.31 0.36 40.80 2.85
2648 2692 2.526304 TGACAGGTGCAGTCACTTAC 57.474 50.000 3.31 0.00 40.80 2.34
2653 2697 2.613725 GTCATCATGACAGGTGCAGTCA 60.614 50.000 13.26 9.43 46.22 3.41
2654 2698 2.005451 GTCATCATGACAGGTGCAGTC 58.995 52.381 13.26 0.00 46.22 3.51
2655 2699 2.105006 GTCATCATGACAGGTGCAGT 57.895 50.000 13.26 0.00 46.22 4.40
2664 2708 2.159043 ACCTGTGGATCGTCATCATGAC 60.159 50.000 7.83 7.83 43.65 3.06
2665 2709 2.110578 ACCTGTGGATCGTCATCATGA 58.889 47.619 0.00 0.00 0.00 3.07
2666 2710 2.609427 ACCTGTGGATCGTCATCATG 57.391 50.000 0.00 0.00 0.00 3.07
2667 2711 4.101585 ACAATACCTGTGGATCGTCATCAT 59.898 41.667 0.00 0.00 36.69 2.45
2668 2712 3.450817 ACAATACCTGTGGATCGTCATCA 59.549 43.478 0.00 0.00 36.69 3.07
2669 2713 4.051922 GACAATACCTGTGGATCGTCATC 58.948 47.826 0.00 0.00 38.84 2.92
2670 2714 3.181465 GGACAATACCTGTGGATCGTCAT 60.181 47.826 0.00 0.00 38.84 3.06
2671 2715 2.167693 GGACAATACCTGTGGATCGTCA 59.832 50.000 0.00 0.00 38.84 4.35
2672 2716 2.167693 TGGACAATACCTGTGGATCGTC 59.832 50.000 0.00 0.00 38.84 4.20
2673 2717 2.168521 CTGGACAATACCTGTGGATCGT 59.831 50.000 0.00 0.00 38.84 3.73
2674 2718 2.826428 CTGGACAATACCTGTGGATCG 58.174 52.381 0.00 0.00 38.84 3.69
2675 2719 2.092968 TGCTGGACAATACCTGTGGATC 60.093 50.000 0.00 0.00 38.84 3.36
2676 2720 1.915489 TGCTGGACAATACCTGTGGAT 59.085 47.619 0.00 0.00 38.84 3.41
2677 2721 1.357137 TGCTGGACAATACCTGTGGA 58.643 50.000 0.00 0.00 38.84 4.02
2678 2722 2.019249 CATGCTGGACAATACCTGTGG 58.981 52.381 0.00 0.00 38.84 4.17
2679 2723 2.019249 CCATGCTGGACAATACCTGTG 58.981 52.381 0.00 0.00 40.96 3.66
2680 2724 1.064463 CCCATGCTGGACAATACCTGT 60.064 52.381 4.00 0.00 40.96 4.00
2681 2725 1.683943 CCCATGCTGGACAATACCTG 58.316 55.000 4.00 0.00 40.96 4.00
2682 2726 0.552848 CCCCATGCTGGACAATACCT 59.447 55.000 4.00 0.00 40.96 3.08
2683 2727 0.258774 ACCCCATGCTGGACAATACC 59.741 55.000 6.51 0.00 40.96 2.73
2684 2728 1.340991 ACACCCCATGCTGGACAATAC 60.341 52.381 6.51 0.00 40.96 1.89
2685 2729 0.998928 ACACCCCATGCTGGACAATA 59.001 50.000 6.51 0.00 40.96 1.90
2686 2730 0.612732 CACACCCCATGCTGGACAAT 60.613 55.000 6.51 0.00 40.96 2.71
2687 2731 1.228521 CACACCCCATGCTGGACAA 60.229 57.895 6.51 0.00 40.96 3.18
2688 2732 2.435663 CACACCCCATGCTGGACA 59.564 61.111 6.51 0.00 40.96 4.02
2689 2733 3.064324 GCACACCCCATGCTGGAC 61.064 66.667 6.51 0.00 40.96 4.02
2690 2734 4.720902 CGCACACCCCATGCTGGA 62.721 66.667 6.51 0.00 40.96 3.86
2691 2735 4.720902 TCGCACACCCCATGCTGG 62.721 66.667 0.00 0.00 41.10 4.85
2692 2736 1.996786 GAATCGCACACCCCATGCTG 61.997 60.000 0.00 0.00 41.10 4.41
2693 2737 1.750399 GAATCGCACACCCCATGCT 60.750 57.895 0.00 0.00 41.10 3.79
2694 2738 1.594194 TTGAATCGCACACCCCATGC 61.594 55.000 0.00 0.00 39.81 4.06
2695 2739 0.452987 CTTGAATCGCACACCCCATG 59.547 55.000 0.00 0.00 0.00 3.66
2696 2740 0.038166 ACTTGAATCGCACACCCCAT 59.962 50.000 0.00 0.00 0.00 4.00
2697 2741 0.687920 TACTTGAATCGCACACCCCA 59.312 50.000 0.00 0.00 0.00 4.96
2698 2742 2.038387 ATACTTGAATCGCACACCCC 57.962 50.000 0.00 0.00 0.00 4.95
2699 2743 3.802685 GTCTATACTTGAATCGCACACCC 59.197 47.826 0.00 0.00 0.00 4.61
2700 2744 4.430007 TGTCTATACTTGAATCGCACACC 58.570 43.478 0.00 0.00 0.00 4.16
2701 2745 5.520288 ACATGTCTATACTTGAATCGCACAC 59.480 40.000 0.00 0.00 35.35 3.82
2702 2746 5.519927 CACATGTCTATACTTGAATCGCACA 59.480 40.000 0.00 0.00 35.35 4.57
2703 2747 5.050769 CCACATGTCTATACTTGAATCGCAC 60.051 44.000 0.00 0.00 35.35 5.34
2704 2748 5.049828 CCACATGTCTATACTTGAATCGCA 58.950 41.667 0.00 0.00 35.35 5.10
2705 2749 4.084328 GCCACATGTCTATACTTGAATCGC 60.084 45.833 0.00 0.00 35.35 4.58
2706 2750 5.292765 AGCCACATGTCTATACTTGAATCG 58.707 41.667 0.00 0.00 35.35 3.34
2707 2751 6.283694 TGAGCCACATGTCTATACTTGAATC 58.716 40.000 0.00 0.00 35.35 2.52
2708 2752 6.239217 TGAGCCACATGTCTATACTTGAAT 57.761 37.500 0.00 0.00 35.35 2.57
2709 2753 5.675684 TGAGCCACATGTCTATACTTGAA 57.324 39.130 0.00 0.00 35.35 2.69
2710 2754 5.876651 ATGAGCCACATGTCTATACTTGA 57.123 39.130 0.00 0.00 37.87 3.02
2711 2755 8.501580 CATTAATGAGCCACATGTCTATACTTG 58.498 37.037 10.04 0.00 39.39 3.16
2712 2756 7.663081 CCATTAATGAGCCACATGTCTATACTT 59.337 37.037 17.23 0.00 39.39 2.24
2713 2757 7.164122 CCATTAATGAGCCACATGTCTATACT 58.836 38.462 17.23 0.00 39.39 2.12
2714 2758 6.372659 CCCATTAATGAGCCACATGTCTATAC 59.627 42.308 17.23 0.00 39.39 1.47
2715 2759 6.044287 ACCCATTAATGAGCCACATGTCTATA 59.956 38.462 17.23 0.00 39.39 1.31
2716 2760 5.163055 ACCCATTAATGAGCCACATGTCTAT 60.163 40.000 17.23 0.00 39.39 1.98
2717 2761 4.165950 ACCCATTAATGAGCCACATGTCTA 59.834 41.667 17.23 0.00 39.39 2.59
2718 2762 3.053395 ACCCATTAATGAGCCACATGTCT 60.053 43.478 17.23 0.00 39.39 3.41
2719 2763 3.290710 ACCCATTAATGAGCCACATGTC 58.709 45.455 17.23 0.00 39.39 3.06
2720 2764 3.386932 ACCCATTAATGAGCCACATGT 57.613 42.857 17.23 0.00 39.39 3.21
2721 2765 3.254166 GCTACCCATTAATGAGCCACATG 59.746 47.826 17.23 0.00 39.39 3.21
2722 2766 3.490348 GCTACCCATTAATGAGCCACAT 58.510 45.455 17.23 0.00 41.45 3.21
2723 2767 2.744823 CGCTACCCATTAATGAGCCACA 60.745 50.000 17.23 0.00 0.00 4.17
2724 2768 1.873591 CGCTACCCATTAATGAGCCAC 59.126 52.381 17.23 2.80 0.00 5.01
2725 2769 1.765904 TCGCTACCCATTAATGAGCCA 59.234 47.619 17.23 4.08 0.00 4.75
2726 2770 2.224305 ACTCGCTACCCATTAATGAGCC 60.224 50.000 17.23 2.87 0.00 4.70
2727 2771 3.113260 ACTCGCTACCCATTAATGAGC 57.887 47.619 17.23 15.70 0.00 4.26
2728 2772 5.869888 GGAATACTCGCTACCCATTAATGAG 59.130 44.000 17.23 6.19 0.00 2.90
2729 2773 5.279809 GGGAATACTCGCTACCCATTAATGA 60.280 44.000 17.23 0.00 40.20 2.57
2730 2774 4.935808 GGGAATACTCGCTACCCATTAATG 59.064 45.833 8.58 8.58 40.20 1.90
2731 2775 4.019591 GGGGAATACTCGCTACCCATTAAT 60.020 45.833 0.00 0.00 42.03 1.40
2732 2776 3.325716 GGGGAATACTCGCTACCCATTAA 59.674 47.826 0.00 0.00 42.03 1.40
2733 2777 2.901839 GGGGAATACTCGCTACCCATTA 59.098 50.000 0.00 0.00 42.03 1.90
2734 2778 1.697982 GGGGAATACTCGCTACCCATT 59.302 52.381 0.00 0.00 42.03 3.16
2735 2779 1.132817 AGGGGAATACTCGCTACCCAT 60.133 52.381 0.00 0.00 42.03 4.00
2736 2780 0.263765 AGGGGAATACTCGCTACCCA 59.736 55.000 0.00 0.00 42.03 4.51
2737 2781 0.967662 GAGGGGAATACTCGCTACCC 59.032 60.000 0.00 0.00 39.79 3.69
2738 2782 1.700955 TGAGGGGAATACTCGCTACC 58.299 55.000 0.00 0.00 37.79 3.18
2739 2783 3.814005 TTTGAGGGGAATACTCGCTAC 57.186 47.619 0.00 0.00 37.79 3.58
2740 2784 3.071023 CCATTTGAGGGGAATACTCGCTA 59.929 47.826 0.00 0.00 37.79 4.26
2741 2785 2.158755 CCATTTGAGGGGAATACTCGCT 60.159 50.000 0.00 0.00 37.79 4.93
2742 2786 2.222027 CCATTTGAGGGGAATACTCGC 58.778 52.381 0.00 0.00 37.79 5.03
2753 2797 2.292828 AACACCAGACCCATTTGAGG 57.707 50.000 0.00 0.00 0.00 3.86
2754 2798 3.799917 GCAAAACACCAGACCCATTTGAG 60.800 47.826 0.00 0.00 31.23 3.02
2755 2799 2.102252 GCAAAACACCAGACCCATTTGA 59.898 45.455 0.00 0.00 31.23 2.69
2756 2800 2.482864 GCAAAACACCAGACCCATTTG 58.517 47.619 0.00 0.00 0.00 2.32
2757 2801 1.416030 GGCAAAACACCAGACCCATTT 59.584 47.619 0.00 0.00 0.00 2.32
2758 2802 1.047801 GGCAAAACACCAGACCCATT 58.952 50.000 0.00 0.00 0.00 3.16
2759 2803 0.831711 GGGCAAAACACCAGACCCAT 60.832 55.000 0.00 0.00 37.30 4.00
2760 2804 1.456705 GGGCAAAACACCAGACCCA 60.457 57.895 0.00 0.00 37.30 4.51
2761 2805 2.207229 GGGGCAAAACACCAGACCC 61.207 63.158 0.00 0.00 36.56 4.46
2762 2806 0.759060 AAGGGGCAAAACACCAGACC 60.759 55.000 0.00 0.00 0.00 3.85
2763 2807 0.389025 CAAGGGGCAAAACACCAGAC 59.611 55.000 0.00 0.00 0.00 3.51
2764 2808 0.260230 TCAAGGGGCAAAACACCAGA 59.740 50.000 0.00 0.00 0.00 3.86
2765 2809 0.389025 GTCAAGGGGCAAAACACCAG 59.611 55.000 0.00 0.00 0.00 4.00
2766 2810 1.045911 GGTCAAGGGGCAAAACACCA 61.046 55.000 0.00 0.00 0.00 4.17
2767 2811 1.745890 GGTCAAGGGGCAAAACACC 59.254 57.895 0.00 0.00 0.00 4.16
2768 2812 1.045911 TGGGTCAAGGGGCAAAACAC 61.046 55.000 0.00 0.00 0.00 3.32
2769 2813 0.105246 ATGGGTCAAGGGGCAAAACA 60.105 50.000 0.00 0.00 0.00 2.83
2770 2814 1.055849 AATGGGTCAAGGGGCAAAAC 58.944 50.000 0.00 0.00 0.00 2.43
2771 2815 1.055040 CAATGGGTCAAGGGGCAAAA 58.945 50.000 0.00 0.00 0.00 2.44
2772 2816 0.105246 ACAATGGGTCAAGGGGCAAA 60.105 50.000 0.00 0.00 0.00 3.68
2773 2817 0.541764 GACAATGGGTCAAGGGGCAA 60.542 55.000 0.00 0.00 46.19 4.52
2774 2818 1.076549 GACAATGGGTCAAGGGGCA 59.923 57.895 0.00 0.00 46.19 5.36
2775 2819 4.018409 GACAATGGGTCAAGGGGC 57.982 61.111 0.00 0.00 46.19 5.80



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.