Multiple sequence alignment - TraesCS1D01G188100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G188100 chr1D 100.000 5808 0 0 1 5808 260564318 260570125 0.000000e+00 10726.0
1 TraesCS1D01G188100 chr1D 97.674 86 2 0 4536 4621 260568938 260568853 1.300000e-31 148.0
2 TraesCS1D01G188100 chr1D 91.566 83 7 0 5685 5767 86107068 86107150 1.320000e-21 115.0
3 TraesCS1D01G188100 chr1D 88.889 90 8 1 4620 4709 101285229 101285142 6.150000e-20 110.0
4 TraesCS1D01G188100 chr1A 94.276 2935 97 19 841 3728 340014752 340011842 0.000000e+00 4423.0
5 TraesCS1D01G188100 chr1A 97.759 714 15 1 3848 4560 340011824 340011111 0.000000e+00 1229.0
6 TraesCS1D01G188100 chr1A 88.284 845 45 20 4868 5689 340010941 340010128 0.000000e+00 963.0
7 TraesCS1D01G188100 chr1A 92.405 237 9 2 631 859 340015003 340014768 4.340000e-86 329.0
8 TraesCS1D01G188100 chr1A 98.261 115 2 0 4696 4810 340011054 340010940 9.870000e-48 202.0
9 TraesCS1D01G188100 chr1A 86.624 157 16 3 3119 3270 171456553 171456397 1.000000e-37 169.0
10 TraesCS1D01G188100 chr1A 91.304 92 5 2 4532 4622 475411196 475411107 7.900000e-24 122.0
11 TraesCS1D01G188100 chr1A 82.014 139 20 5 612 746 128051230 128051093 4.760000e-21 113.0
12 TraesCS1D01G188100 chr1A 90.476 84 6 1 4620 4703 104216466 104216547 6.150000e-20 110.0
13 TraesCS1D01G188100 chr1B 93.451 1695 63 12 828 2482 352393668 352391982 0.000000e+00 2471.0
14 TraesCS1D01G188100 chr1B 88.949 1285 80 25 3273 4536 352391390 352390147 0.000000e+00 1530.0
15 TraesCS1D01G188100 chr1B 87.690 593 53 13 2541 3122 352391981 352391398 0.000000e+00 673.0
16 TraesCS1D01G188100 chr1B 93.584 452 17 2 5154 5596 352389657 352389209 0.000000e+00 664.0
17 TraesCS1D01G188100 chr1B 89.260 419 23 5 4673 5078 352390102 352389693 6.720000e-139 505.0
18 TraesCS1D01G188100 chr1B 88.179 313 29 7 60 368 352395927 352395619 3.310000e-97 366.0
19 TraesCS1D01G188100 chr1B 91.935 248 18 2 555 801 352395615 352395369 4.310000e-91 346.0
20 TraesCS1D01G188100 chr1B 86.700 203 27 0 1 203 114438572 114438370 5.860000e-55 226.0
21 TraesCS1D01G188100 chr1B 78.125 192 28 13 564 745 54140955 54141142 6.150000e-20 110.0
22 TraesCS1D01G188100 chr4D 96.407 167 6 0 397 563 281177247 281177081 5.730000e-70 276.0
23 TraesCS1D01G188100 chr4D 96.341 164 6 0 397 560 407792162 407792325 2.670000e-68 270.0
24 TraesCS1D01G188100 chr4D 93.333 180 8 3 384 559 374601852 374602031 4.460000e-66 263.0
25 TraesCS1D01G188100 chr2A 94.382 178 8 2 397 572 737477897 737478074 7.420000e-69 272.0
26 TraesCS1D01G188100 chr2A 85.714 147 16 3 3120 3261 79316158 79316012 3.630000e-32 150.0
27 TraesCS1D01G188100 chr2A 86.792 106 8 6 4533 4635 337719098 337719200 4.760000e-21 113.0
28 TraesCS1D01G188100 chr2D 96.894 161 5 0 397 557 18206980 18207140 2.670000e-68 270.0
29 TraesCS1D01G188100 chr2D 84.120 233 29 8 348 572 601975040 601974808 9.800000e-53 219.0
30 TraesCS1D01G188100 chr2D 84.049 163 20 4 3111 3268 122864102 122864263 1.010000e-32 152.0
31 TraesCS1D01G188100 chr2D 84.416 154 19 3 3120 3268 79056320 79056167 4.690000e-31 147.0
32 TraesCS1D01G188100 chr2D 87.368 95 4 5 5684 5772 407254410 407254502 1.030000e-17 102.0
33 TraesCS1D01G188100 chr5D 93.785 177 9 2 381 556 421530395 421530570 1.240000e-66 265.0
34 TraesCS1D01G188100 chr5D 82.879 257 36 7 397 650 444361512 444361763 2.110000e-54 224.0
35 TraesCS1D01G188100 chr5D 93.243 74 3 1 5686 5759 498669830 498669759 2.210000e-19 108.0
36 TraesCS1D01G188100 chr7D 94.186 172 10 0 397 568 614813495 614813324 4.460000e-66 263.0
37 TraesCS1D01G188100 chr7D 92.896 183 8 4 386 565 53269384 53269204 1.610000e-65 261.0
38 TraesCS1D01G188100 chr7D 85.096 208 28 3 1 208 636717558 636717762 5.900000e-50 209.0
39 TraesCS1D01G188100 chr7D 91.139 79 5 1 4620 4698 99461792 99461868 7.960000e-19 106.0
40 TraesCS1D01G188100 chr3B 86.000 200 28 0 1 200 625420172 625419973 1.270000e-51 215.0
41 TraesCS1D01G188100 chr3B 84.577 201 29 2 1 200 156874138 156874337 1.280000e-46 198.0
42 TraesCS1D01G188100 chr3B 84.390 205 27 5 1 204 244977506 244977306 4.590000e-46 196.0
43 TraesCS1D01G188100 chr3B 75.578 303 50 14 2718 3003 156915579 156915284 1.700000e-25 128.0
44 TraesCS1D01G188100 chr3B 90.323 93 7 2 4524 4615 806726714 806726623 2.840000e-23 121.0
45 TraesCS1D01G188100 chr3B 91.667 84 5 1 4620 4703 637089700 637089781 1.320000e-21 115.0
46 TraesCS1D01G188100 chr2B 85.354 198 28 1 1 197 198515827 198515630 2.740000e-48 204.0
47 TraesCS1D01G188100 chr5B 84.541 207 28 4 1 205 559165099 559165303 9.870000e-48 202.0
48 TraesCS1D01G188100 chr6D 84.925 199 29 1 2 200 20336071 20336268 3.550000e-47 200.0
49 TraesCS1D01G188100 chr6D 92.941 85 4 1 4620 4704 88776578 88776496 7.900000e-24 122.0
50 TraesCS1D01G188100 chr6D 91.209 91 7 1 4534 4624 100540805 100540716 7.900000e-24 122.0
51 TraesCS1D01G188100 chr6D 93.421 76 4 1 5685 5760 294774921 294774847 1.710000e-20 111.0
52 TraesCS1D01G188100 chr7B 85.906 149 20 1 3121 3268 477814969 477814821 2.170000e-34 158.0
53 TraesCS1D01G188100 chr7B 85.714 154 17 3 3121 3269 505937466 505937313 2.170000e-34 158.0
54 TraesCS1D01G188100 chr7B 82.065 184 25 5 564 746 605960120 605959944 3.630000e-32 150.0
55 TraesCS1D01G188100 chr3D 82.659 173 23 5 3101 3268 170547119 170546949 4.690000e-31 147.0
56 TraesCS1D01G188100 chr3D 83.750 160 20 4 3116 3270 365922047 365921889 4.690000e-31 147.0
57 TraesCS1D01G188100 chr3D 91.667 84 5 1 4620 4703 477907362 477907443 1.320000e-21 115.0
58 TraesCS1D01G188100 chr3D 88.235 85 7 2 5686 5769 515014845 515014763 1.330000e-16 99.0
59 TraesCS1D01G188100 chr4B 94.318 88 3 1 4620 4707 41531498 41531413 3.650000e-27 134.0
60 TraesCS1D01G188100 chr3A 93.023 86 5 1 4536 4621 507291490 507291574 2.200000e-24 124.0
61 TraesCS1D01G188100 chr3A 92.045 88 5 2 4534 4621 159833501 159833586 7.900000e-24 122.0
62 TraesCS1D01G188100 chr3A 80.625 160 25 6 590 746 12343434 12343590 1.020000e-22 119.0
63 TraesCS1D01G188100 chr3A 75.882 170 35 6 581 746 152658448 152658281 1.340000e-11 82.4
64 TraesCS1D01G188100 chr7A 78.500 200 33 8 555 745 30857799 30857997 7.900000e-24 122.0
65 TraesCS1D01G188100 chr7A 77.778 207 34 11 331 532 510625610 510625411 3.680000e-22 117.0
66 TraesCS1D01G188100 chr7A 93.243 74 5 0 5686 5759 60725593 60725520 6.150000e-20 110.0
67 TraesCS1D01G188100 chr7A 89.412 85 7 1 4620 4704 509222374 509222456 7.960000e-19 106.0
68 TraesCS1D01G188100 chr6B 90.426 94 6 2 4532 4624 675195115 675195024 2.840000e-23 121.0
69 TraesCS1D01G188100 chr6B 91.566 83 5 2 5680 5762 434668457 434668377 4.760000e-21 113.0
70 TraesCS1D01G188100 chr4A 78.125 192 39 2 555 743 123256617 123256808 1.020000e-22 119.0
71 TraesCS1D01G188100 chr4A 93.243 74 4 1 5686 5759 615196437 615196365 2.210000e-19 108.0
72 TraesCS1D01G188100 chrUn 92.405 79 5 1 5686 5763 110687410 110687488 1.710000e-20 111.0
73 TraesCS1D01G188100 chrUn 88.764 89 5 2 4620 4708 134242369 134242286 2.860000e-18 104.0
74 TraesCS1D01G188100 chr5A 84.167 120 10 7 4506 4624 131645832 131645721 2.210000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G188100 chr1D 260564318 260570125 5807 False 10726.000000 10726 100.000000 1 5808 1 chr1D.!!$F2 5807
1 TraesCS1D01G188100 chr1A 340010128 340015003 4875 True 1429.200000 4423 94.197000 631 5689 5 chr1A.!!$R4 5058
2 TraesCS1D01G188100 chr1B 352389209 352395927 6718 True 936.428571 2471 90.435429 60 5596 7 chr1B.!!$R2 5536

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
36 37 0.462937 TGACGGGTGTTGGTGTCAAG 60.463 55.0 0.00 0.0 38.32 3.02 F
1101 2781 0.107263 TTGCTCGCATGATTGCCCTA 60.107 50.0 0.00 0.0 46.57 3.53 F
2837 4570 0.109412 CTGCTTAAAGCTGCACTGCC 60.109 55.0 1.02 0.0 42.97 4.85 F
3543 5285 2.397044 TTTTTGGTTGAGCAGGGGAT 57.603 45.0 0.00 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1427 3112 0.457035 TATCGGTAACCTGGCACGTC 59.543 55.000 0.0 0.0 0.00 4.34 R
3026 4759 0.179000 CGCTACAATCCCCTTCAGCT 59.821 55.000 0.0 0.0 0.00 4.24 R
3744 5492 1.133976 GCAGAAGGCACCAGACCATAT 60.134 52.381 0.0 0.0 43.97 1.78 R
5180 6957 0.387239 GCCGGTGCATGTCAACTTTC 60.387 55.000 1.9 0.0 37.47 2.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.496817 GCTAGAGGCAGGTGACGG 59.503 66.667 0.00 0.00 41.35 4.79
23 24 3.082579 GCTAGAGGCAGGTGACGGG 62.083 68.421 0.00 0.00 41.35 5.28
24 25 1.682684 CTAGAGGCAGGTGACGGGT 60.683 63.158 0.00 0.00 0.00 5.28
25 26 1.949847 CTAGAGGCAGGTGACGGGTG 61.950 65.000 0.00 0.00 0.00 4.61
26 27 2.725127 TAGAGGCAGGTGACGGGTGT 62.725 60.000 0.00 0.00 0.00 4.16
27 28 3.168528 AGGCAGGTGACGGGTGTT 61.169 61.111 0.00 0.00 0.00 3.32
28 29 2.978010 GGCAGGTGACGGGTGTTG 60.978 66.667 0.00 0.00 0.00 3.33
29 30 2.978010 GCAGGTGACGGGTGTTGG 60.978 66.667 0.00 0.00 0.00 3.77
30 31 2.508928 CAGGTGACGGGTGTTGGT 59.491 61.111 0.00 0.00 0.00 3.67
31 32 1.891919 CAGGTGACGGGTGTTGGTG 60.892 63.158 0.00 0.00 0.00 4.17
32 33 2.191109 GGTGACGGGTGTTGGTGT 59.809 61.111 0.00 0.00 0.00 4.16
33 34 1.890510 GGTGACGGGTGTTGGTGTC 60.891 63.158 0.00 0.00 0.00 3.67
34 35 1.153329 GTGACGGGTGTTGGTGTCA 60.153 57.895 0.00 0.00 38.91 3.58
35 36 0.745128 GTGACGGGTGTTGGTGTCAA 60.745 55.000 0.00 0.00 42.43 3.18
36 37 0.462937 TGACGGGTGTTGGTGTCAAG 60.463 55.000 0.00 0.00 38.32 3.02
37 38 1.782028 GACGGGTGTTGGTGTCAAGC 61.782 60.000 0.00 0.00 32.92 4.01
38 39 1.525995 CGGGTGTTGGTGTCAAGCT 60.526 57.895 0.00 0.00 32.92 3.74
39 40 1.101049 CGGGTGTTGGTGTCAAGCTT 61.101 55.000 0.00 0.00 32.92 3.74
40 41 1.812324 CGGGTGTTGGTGTCAAGCTTA 60.812 52.381 0.00 0.00 32.92 3.09
41 42 1.880027 GGGTGTTGGTGTCAAGCTTAG 59.120 52.381 0.00 0.00 32.92 2.18
42 43 2.486548 GGGTGTTGGTGTCAAGCTTAGA 60.487 50.000 0.00 0.00 32.92 2.10
43 44 3.412386 GGTGTTGGTGTCAAGCTTAGAT 58.588 45.455 0.00 0.00 32.92 1.98
44 45 4.564821 GGGTGTTGGTGTCAAGCTTAGATA 60.565 45.833 0.00 0.00 32.92 1.98
45 46 5.186198 GGTGTTGGTGTCAAGCTTAGATAT 58.814 41.667 0.00 0.00 32.92 1.63
46 47 5.648092 GGTGTTGGTGTCAAGCTTAGATATT 59.352 40.000 0.00 0.00 32.92 1.28
47 48 6.151144 GGTGTTGGTGTCAAGCTTAGATATTT 59.849 38.462 0.00 0.00 32.92 1.40
48 49 7.244192 GTGTTGGTGTCAAGCTTAGATATTTC 58.756 38.462 0.00 0.00 32.92 2.17
49 50 7.119846 GTGTTGGTGTCAAGCTTAGATATTTCT 59.880 37.037 0.00 0.00 32.92 2.52
50 51 7.665559 TGTTGGTGTCAAGCTTAGATATTTCTT 59.334 33.333 0.00 0.00 32.92 2.52
51 52 7.849804 TGGTGTCAAGCTTAGATATTTCTTC 57.150 36.000 0.00 0.00 33.17 2.87
52 53 6.535150 TGGTGTCAAGCTTAGATATTTCTTCG 59.465 38.462 0.00 0.00 33.17 3.79
53 54 6.018669 GGTGTCAAGCTTAGATATTTCTTCGG 60.019 42.308 0.00 0.00 33.17 4.30
54 55 6.535508 GTGTCAAGCTTAGATATTTCTTCGGT 59.464 38.462 0.00 0.00 33.17 4.69
55 56 6.757010 TGTCAAGCTTAGATATTTCTTCGGTC 59.243 38.462 0.00 0.00 33.17 4.79
56 57 6.981559 GTCAAGCTTAGATATTTCTTCGGTCT 59.018 38.462 0.00 0.00 33.17 3.85
57 58 7.492994 GTCAAGCTTAGATATTTCTTCGGTCTT 59.507 37.037 0.00 0.00 33.17 3.01
58 59 7.492669 TCAAGCTTAGATATTTCTTCGGTCTTG 59.507 37.037 0.00 0.00 33.17 3.02
59 60 6.879400 AGCTTAGATATTTCTTCGGTCTTGT 58.121 36.000 0.00 0.00 33.17 3.16
60 61 7.331791 AGCTTAGATATTTCTTCGGTCTTGTT 58.668 34.615 0.00 0.00 33.17 2.83
61 62 7.824779 AGCTTAGATATTTCTTCGGTCTTGTTT 59.175 33.333 0.00 0.00 33.17 2.83
62 63 7.905493 GCTTAGATATTTCTTCGGTCTTGTTTG 59.095 37.037 0.00 0.00 33.17 2.93
63 64 8.842358 TTAGATATTTCTTCGGTCTTGTTTGT 57.158 30.769 0.00 0.00 33.17 2.83
64 65 9.932207 TTAGATATTTCTTCGGTCTTGTTTGTA 57.068 29.630 0.00 0.00 33.17 2.41
74 75 9.166126 CTTCGGTCTTGTTTGTATTTTTACTTC 57.834 33.333 0.00 0.00 0.00 3.01
78 79 9.244799 GGTCTTGTTTGTATTTTTACTTCTTGG 57.755 33.333 0.00 0.00 0.00 3.61
84 85 6.325919 TGTATTTTTACTTCTTGGCTGGTG 57.674 37.500 0.00 0.00 0.00 4.17
85 86 3.726291 TTTTTACTTCTTGGCTGGTGC 57.274 42.857 0.00 0.00 38.76 5.01
106 107 3.389741 CTTTGTGCAAAGGCTAGCG 57.610 52.632 9.00 0.00 42.96 4.26
109 110 1.028905 TTGTGCAAAGGCTAGCGTTT 58.971 45.000 25.57 25.57 41.91 3.60
110 111 0.591170 TGTGCAAAGGCTAGCGTTTC 59.409 50.000 27.73 21.93 41.91 2.78
113 114 2.182614 GCAAAGGCTAGCGTTTCGCA 62.183 55.000 30.37 2.21 46.21 5.10
137 138 6.930667 ACTTTTTAAGTTTTGCTAGGTCGA 57.069 33.333 0.00 0.00 39.04 4.20
328 332 6.701145 TTTGTGTACACTTGGAGCATTTTA 57.299 33.333 25.60 0.00 0.00 1.52
418 422 6.997239 ACCCTCCGTTTCTAAATATTTGTC 57.003 37.500 11.05 0.00 0.00 3.18
419 423 6.718294 ACCCTCCGTTTCTAAATATTTGTCT 58.282 36.000 11.05 0.00 0.00 3.41
420 424 7.173032 ACCCTCCGTTTCTAAATATTTGTCTT 58.827 34.615 11.05 0.00 0.00 3.01
421 425 7.668469 ACCCTCCGTTTCTAAATATTTGTCTTT 59.332 33.333 11.05 0.00 0.00 2.52
422 426 8.182227 CCCTCCGTTTCTAAATATTTGTCTTTC 58.818 37.037 11.05 0.00 0.00 2.62
423 427 8.947115 CCTCCGTTTCTAAATATTTGTCTTTCT 58.053 33.333 11.05 0.00 0.00 2.52
438 442 9.971922 ATTTGTCTTTCTAGAGGTTTCAAATTG 57.028 29.630 13.76 0.00 31.81 2.32
439 443 8.519799 TTGTCTTTCTAGAGGTTTCAAATTGT 57.480 30.769 0.00 0.00 0.00 2.71
440 444 7.930217 TGTCTTTCTAGAGGTTTCAAATTGTG 58.070 34.615 0.00 0.00 0.00 3.33
441 445 7.773224 TGTCTTTCTAGAGGTTTCAAATTGTGA 59.227 33.333 0.00 0.00 0.00 3.58
442 446 8.070769 GTCTTTCTAGAGGTTTCAAATTGTGAC 58.929 37.037 0.00 0.00 35.39 3.67
443 447 7.993183 TCTTTCTAGAGGTTTCAAATTGTGACT 59.007 33.333 0.00 0.00 35.39 3.41
444 448 9.273016 CTTTCTAGAGGTTTCAAATTGTGACTA 57.727 33.333 0.00 0.00 35.39 2.59
445 449 8.603242 TTCTAGAGGTTTCAAATTGTGACTAC 57.397 34.615 0.00 0.00 35.39 2.73
446 450 7.732025 TCTAGAGGTTTCAAATTGTGACTACA 58.268 34.615 0.00 0.00 35.39 2.74
447 451 8.375506 TCTAGAGGTTTCAAATTGTGACTACAT 58.624 33.333 0.00 0.00 35.39 2.29
448 452 9.653287 CTAGAGGTTTCAAATTGTGACTACATA 57.347 33.333 0.00 0.00 35.39 2.29
449 453 8.324163 AGAGGTTTCAAATTGTGACTACATAC 57.676 34.615 0.00 0.00 35.39 2.39
450 454 7.117812 AGAGGTTTCAAATTGTGACTACATACG 59.882 37.037 0.00 0.00 35.39 3.06
451 455 6.148811 AGGTTTCAAATTGTGACTACATACGG 59.851 38.462 0.00 0.00 35.39 4.02
452 456 6.148150 GGTTTCAAATTGTGACTACATACGGA 59.852 38.462 0.00 0.00 35.39 4.69
453 457 7.308109 GGTTTCAAATTGTGACTACATACGGAA 60.308 37.037 0.00 0.00 35.39 4.30
454 458 6.715344 TCAAATTGTGACTACATACGGAAC 57.285 37.500 0.00 0.00 36.53 3.62
455 459 6.224584 TCAAATTGTGACTACATACGGAACA 58.775 36.000 0.00 0.00 36.53 3.18
456 460 6.706716 TCAAATTGTGACTACATACGGAACAA 59.293 34.615 0.00 0.00 36.53 2.83
457 461 7.226918 TCAAATTGTGACTACATACGGAACAAA 59.773 33.333 0.00 0.00 36.53 2.83
458 462 7.681939 AATTGTGACTACATACGGAACAAAT 57.318 32.000 0.00 0.00 36.53 2.32
459 463 7.681939 ATTGTGACTACATACGGAACAAATT 57.318 32.000 0.00 0.00 36.53 1.82
460 464 6.474819 TGTGACTACATACGGAACAAATTG 57.525 37.500 0.00 0.00 0.00 2.32
461 465 6.224584 TGTGACTACATACGGAACAAATTGA 58.775 36.000 0.00 0.00 0.00 2.57
462 466 6.367695 TGTGACTACATACGGAACAAATTGAG 59.632 38.462 0.00 0.00 0.00 3.02
463 467 6.367969 GTGACTACATACGGAACAAATTGAGT 59.632 38.462 0.00 0.00 0.00 3.41
464 468 6.367695 TGACTACATACGGAACAAATTGAGTG 59.632 38.462 0.00 0.00 0.00 3.51
465 469 6.460781 ACTACATACGGAACAAATTGAGTGA 58.539 36.000 0.00 0.00 0.00 3.41
466 470 6.932400 ACTACATACGGAACAAATTGAGTGAA 59.068 34.615 0.00 0.00 0.00 3.18
467 471 6.817765 ACATACGGAACAAATTGAGTGAAT 57.182 33.333 0.00 0.00 0.00 2.57
468 472 6.842163 ACATACGGAACAAATTGAGTGAATC 58.158 36.000 0.00 0.00 0.00 2.52
469 473 6.655003 ACATACGGAACAAATTGAGTGAATCT 59.345 34.615 0.00 0.00 0.00 2.40
470 474 7.822334 ACATACGGAACAAATTGAGTGAATCTA 59.178 33.333 0.00 0.00 0.00 1.98
471 475 6.481954 ACGGAACAAATTGAGTGAATCTAC 57.518 37.500 0.00 0.00 0.00 2.59
472 476 5.995282 ACGGAACAAATTGAGTGAATCTACA 59.005 36.000 0.00 0.00 0.00 2.74
473 477 6.073222 ACGGAACAAATTGAGTGAATCTACAC 60.073 38.462 0.00 0.00 40.60 2.90
506 510 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
507 511 7.153217 TGTCTATATACATCCGTATGTGGTG 57.847 40.000 3.56 0.00 45.99 4.17
508 512 6.943718 TGTCTATATACATCCGTATGTGGTGA 59.056 38.462 3.56 0.00 45.99 4.02
509 513 7.614192 TGTCTATATACATCCGTATGTGGTGAT 59.386 37.037 3.56 0.00 45.99 3.06
510 514 8.129840 GTCTATATACATCCGTATGTGGTGATC 58.870 40.741 3.56 0.00 45.99 2.92
511 515 6.850752 ATATACATCCGTATGTGGTGATCA 57.149 37.500 3.56 0.00 45.99 2.92
512 516 5.745312 ATACATCCGTATGTGGTGATCAT 57.255 39.130 3.56 0.00 45.99 2.45
513 517 4.422073 ACATCCGTATGTGGTGATCATT 57.578 40.909 0.00 0.00 44.79 2.57
514 518 4.780815 ACATCCGTATGTGGTGATCATTT 58.219 39.130 0.00 0.00 44.79 2.32
515 519 4.576053 ACATCCGTATGTGGTGATCATTTG 59.424 41.667 0.00 0.00 44.79 2.32
516 520 4.479786 TCCGTATGTGGTGATCATTTGA 57.520 40.909 0.00 0.00 0.00 2.69
517 521 4.837972 TCCGTATGTGGTGATCATTTGAA 58.162 39.130 0.00 0.00 0.00 2.69
518 522 5.249420 TCCGTATGTGGTGATCATTTGAAA 58.751 37.500 0.00 0.00 0.00 2.69
519 523 5.885352 TCCGTATGTGGTGATCATTTGAAAT 59.115 36.000 0.00 0.00 0.00 2.17
520 524 6.038161 TCCGTATGTGGTGATCATTTGAAATC 59.962 38.462 0.00 0.00 0.00 2.17
521 525 6.038603 CCGTATGTGGTGATCATTTGAAATCT 59.961 38.462 0.00 0.00 0.00 2.40
522 526 7.128331 CGTATGTGGTGATCATTTGAAATCTC 58.872 38.462 0.00 0.00 0.00 2.75
523 527 7.011763 CGTATGTGGTGATCATTTGAAATCTCT 59.988 37.037 0.00 0.00 0.00 3.10
524 528 9.330063 GTATGTGGTGATCATTTGAAATCTCTA 57.670 33.333 0.00 0.00 0.00 2.43
525 529 7.854557 TGTGGTGATCATTTGAAATCTCTAG 57.145 36.000 0.00 0.00 0.00 2.43
526 530 7.623630 TGTGGTGATCATTTGAAATCTCTAGA 58.376 34.615 0.00 0.00 0.00 2.43
527 531 8.102676 TGTGGTGATCATTTGAAATCTCTAGAA 58.897 33.333 0.00 0.00 0.00 2.10
528 532 8.950210 GTGGTGATCATTTGAAATCTCTAGAAA 58.050 33.333 0.00 0.00 0.00 2.52
529 533 9.170734 TGGTGATCATTTGAAATCTCTAGAAAG 57.829 33.333 0.00 0.00 0.00 2.62
530 534 9.388506 GGTGATCATTTGAAATCTCTAGAAAGA 57.611 33.333 0.00 0.00 0.00 2.52
532 536 9.948964 TGATCATTTGAAATCTCTAGAAAGACA 57.051 29.630 0.00 0.00 0.00 3.41
546 550 9.672086 CTCTAGAAAGACAGATATTTAGGAACG 57.328 37.037 0.00 0.00 0.00 3.95
547 551 8.630917 TCTAGAAAGACAGATATTTAGGAACGG 58.369 37.037 0.00 0.00 0.00 4.44
548 552 7.419711 AGAAAGACAGATATTTAGGAACGGA 57.580 36.000 0.00 0.00 0.00 4.69
549 553 7.493367 AGAAAGACAGATATTTAGGAACGGAG 58.507 38.462 0.00 0.00 0.00 4.63
550 554 5.793030 AGACAGATATTTAGGAACGGAGG 57.207 43.478 0.00 0.00 0.00 4.30
551 555 4.589374 AGACAGATATTTAGGAACGGAGGG 59.411 45.833 0.00 0.00 0.00 4.30
552 556 4.553678 ACAGATATTTAGGAACGGAGGGA 58.446 43.478 0.00 0.00 0.00 4.20
553 557 4.589374 ACAGATATTTAGGAACGGAGGGAG 59.411 45.833 0.00 0.00 0.00 4.30
572 576 6.748132 AGGGAGTACATGACAAACATTTTTG 58.252 36.000 0.00 2.77 46.61 2.44
606 610 9.914923 GTTTAAAGTTTTTCGAATGCTTGATTT 57.085 25.926 0.00 0.00 0.00 2.17
766 771 4.254709 TGTGGCTCCTGCGCACTT 62.255 61.111 5.66 0.00 39.45 3.16
906 2585 0.975040 CAGGTCTGCTCTAGCCCAGT 60.975 60.000 0.00 0.00 41.18 4.00
948 2628 5.307976 CCCATCCATAAAGATAGACTGACCA 59.692 44.000 0.00 0.00 0.00 4.02
967 2647 5.105187 TGACCAAGATTCAGACATAGTCAGG 60.105 44.000 0.00 0.00 34.60 3.86
993 2673 0.947660 CGTCAGCAGAAGCAGAGCAA 60.948 55.000 0.00 0.00 45.49 3.91
1096 2776 1.202222 GGAAGGTTGCTCGCATGATTG 60.202 52.381 0.00 0.00 0.00 2.67
1098 2778 1.226773 GGTTGCTCGCATGATTGCC 60.227 57.895 0.00 0.00 46.57 4.52
1101 2781 0.107263 TTGCTCGCATGATTGCCCTA 60.107 50.000 0.00 0.00 46.57 3.53
1150 2830 1.545582 CCATGAGCGATTTGGTTTGGT 59.454 47.619 0.00 0.00 30.95 3.67
1295 2976 2.047465 CTGCAGAGGAACAGCGCT 60.047 61.111 8.42 2.64 33.65 5.92
1427 3112 9.429359 CAAGTAGTATAAATTATGGCTCAGGAG 57.571 37.037 0.00 0.00 0.00 3.69
1443 3128 1.445582 GAGACGTGCCAGGTTACCG 60.446 63.158 0.00 0.00 0.00 4.02
1521 3233 4.686554 AGCTGAACGTCATTACTTTGTCTC 59.313 41.667 0.00 0.00 0.00 3.36
1598 3310 4.946784 AAGTATTTGTCATCGTGCTTCC 57.053 40.909 0.00 0.00 0.00 3.46
1715 3427 6.815641 CCATTGATATTATCCTCAGTTCCTCG 59.184 42.308 1.27 0.00 0.00 4.63
1973 3685 8.665685 GTTTGTTACCTGTCATCCTTATAAGTG 58.334 37.037 11.50 4.45 0.00 3.16
2178 3901 9.241317 AGCAAAATGAAATCGATCAATTGTATC 57.759 29.630 5.13 6.58 34.89 2.24
2186 3909 6.755461 ATCGATCAATTGTATCAGAACGAC 57.245 37.500 5.13 0.00 37.94 4.34
2477 4207 3.983044 AATTATATCCCGTGGAGAGGC 57.017 47.619 0.00 0.00 34.05 4.70
2508 4238 4.034975 TGCTTTATGTTGCCTTTTGTTTGC 59.965 37.500 0.00 0.00 0.00 3.68
2523 4253 7.656948 CCTTTTGTTTGCTCCTATTCATTTTCA 59.343 33.333 0.00 0.00 0.00 2.69
2524 4254 9.211485 CTTTTGTTTGCTCCTATTCATTTTCAT 57.789 29.630 0.00 0.00 0.00 2.57
2525 4255 8.537049 TTTGTTTGCTCCTATTCATTTTCATG 57.463 30.769 0.00 0.00 0.00 3.07
2526 4256 6.632909 TGTTTGCTCCTATTCATTTTCATGG 58.367 36.000 0.00 0.00 0.00 3.66
2527 4257 6.211184 TGTTTGCTCCTATTCATTTTCATGGT 59.789 34.615 0.00 0.00 0.00 3.55
2528 4258 6.855763 TTGCTCCTATTCATTTTCATGGTT 57.144 33.333 0.00 0.00 0.00 3.67
2529 4259 6.211587 TGCTCCTATTCATTTTCATGGTTG 57.788 37.500 0.00 0.00 0.00 3.77
2530 4260 5.951148 TGCTCCTATTCATTTTCATGGTTGA 59.049 36.000 0.00 0.00 0.00 3.18
2531 4261 6.608405 TGCTCCTATTCATTTTCATGGTTGAT 59.392 34.615 0.00 0.00 0.00 2.57
2532 4262 6.921857 GCTCCTATTCATTTTCATGGTTGATG 59.078 38.462 0.00 0.00 0.00 3.07
2625 4358 5.581126 TCAAACATAGGCTAATTTGGCTG 57.419 39.130 22.81 12.35 42.92 4.85
2633 4366 1.815003 GCTAATTTGGCTGTGCACTCT 59.185 47.619 19.41 0.00 0.00 3.24
2637 4370 0.394216 TTTGGCTGTGCACTCTGTGT 60.394 50.000 19.41 0.00 35.75 3.72
2683 4416 2.881403 GCCTCCAGTCAATTGTCCATGT 60.881 50.000 5.13 0.00 0.00 3.21
2837 4570 0.109412 CTGCTTAAAGCTGCACTGCC 60.109 55.000 1.02 0.00 42.97 4.85
3026 4759 7.308469 GCATAGCAATTTGAATTTTGAAACCCA 60.308 33.333 0.00 0.00 0.00 4.51
3131 4870 5.728937 TCCTTACATAGTACTCCCTCTGT 57.271 43.478 0.00 0.00 0.00 3.41
3184 4923 3.699538 AGATGCACTACATACGGACTGAA 59.300 43.478 0.00 0.00 39.84 3.02
3185 4924 3.945981 TGCACTACATACGGACTGAAA 57.054 42.857 0.00 0.00 0.00 2.69
3186 4925 4.465632 TGCACTACATACGGACTGAAAT 57.534 40.909 0.00 0.00 0.00 2.17
3188 4927 4.081917 TGCACTACATACGGACTGAAATGA 60.082 41.667 7.93 0.00 0.00 2.57
3189 4928 4.267928 GCACTACATACGGACTGAAATGAC 59.732 45.833 7.93 0.00 0.00 3.06
3542 5284 3.935371 TTTTTGGTTGAGCAGGGGA 57.065 47.368 0.00 0.00 0.00 4.81
3543 5285 2.397044 TTTTTGGTTGAGCAGGGGAT 57.603 45.000 0.00 0.00 0.00 3.85
3761 5509 3.498774 ATGATATGGTCTGGTGCCTTC 57.501 47.619 0.00 0.00 0.00 3.46
3764 5512 0.253044 TATGGTCTGGTGCCTTCTGC 59.747 55.000 0.00 0.00 41.77 4.26
3768 5516 3.052082 CTGGTGCCTTCTGCGGTG 61.052 66.667 0.00 0.00 45.60 4.94
3778 5526 4.887071 TGCCTTCTGCGGTGATTATTATTT 59.113 37.500 0.00 0.00 45.60 1.40
3801 5549 7.944729 TTTAGAAGCTTTGAATGCCTTCTAT 57.055 32.000 17.08 5.11 34.07 1.98
3824 5572 6.707440 TTTCTCTATTTGCTTGTTGGTTCA 57.293 33.333 0.00 0.00 0.00 3.18
3836 5584 4.150897 TGTTGGTTCAGTCTACTTGCTT 57.849 40.909 0.00 0.00 0.00 3.91
3845 5593 3.008049 CAGTCTACTTGCTTAACCCCTGT 59.992 47.826 0.00 0.00 0.00 4.00
4301 6057 4.592485 TCTCTTGAAGAAGTCAGGTGTC 57.408 45.455 0.00 0.00 37.61 3.67
4490 6254 2.202260 CTGTTGCTGCGACGCATG 60.202 61.111 24.71 17.70 40.04 4.06
4571 6335 9.982291 GTCTCATAATATAAGACGTTTTTGCAA 57.018 29.630 0.00 0.00 31.01 4.08
4578 6342 9.855021 AATATAAGACGTTTTTGCAAGCTAAAT 57.145 25.926 0.00 0.00 0.00 1.40
4579 6343 5.888412 AAGACGTTTTTGCAAGCTAAATG 57.112 34.783 11.14 11.14 0.00 2.32
4581 6345 6.067263 AGACGTTTTTGCAAGCTAAATGTA 57.933 33.333 16.20 0.00 32.72 2.29
4582 6346 6.142817 AGACGTTTTTGCAAGCTAAATGTAG 58.857 36.000 16.20 4.89 32.72 2.74
4606 6370 8.841444 AGCTTGCAAAAACGTCTTATATTATG 57.159 30.769 0.00 0.00 0.00 1.90
4654 6418 9.869757 ACCAAATTATAAGACATTTTTGTAGGC 57.130 29.630 6.34 0.00 0.00 3.93
4665 6429 8.297426 AGACATTTTTGTAGGCTAAACTTAAGC 58.703 33.333 1.29 0.00 39.33 3.09
4676 6440 6.906584 GCTAAACTTAAGCCTACAAAAACG 57.093 37.500 1.29 0.00 33.73 3.60
4688 6452 9.620660 AAGCCTACAAAAACGTCTTATATTTTG 57.379 29.630 15.70 15.70 44.34 2.44
4689 6453 9.005777 AGCCTACAAAAACGTCTTATATTTTGA 57.994 29.630 21.46 9.08 42.48 2.69
4821 6585 7.011950 CACATACAAATAACTAGCGGGATTTCA 59.988 37.037 0.00 0.00 0.00 2.69
4826 6590 1.722011 ACTAGCGGGATTTCAACGTG 58.278 50.000 0.00 0.00 0.00 4.49
4922 6686 6.092807 TGCAATGCGTATTATGACTGTAAACA 59.907 34.615 0.00 0.00 0.00 2.83
4942 6706 9.968743 GTAAACATAGTTGTATTTCAGTACAGC 57.031 33.333 0.00 0.00 36.08 4.40
4962 6726 3.446161 AGCTGTAACGGTTCTAGTGCATA 59.554 43.478 0.00 0.00 0.00 3.14
4963 6727 4.099573 AGCTGTAACGGTTCTAGTGCATAT 59.900 41.667 0.00 0.00 0.00 1.78
4964 6728 5.301045 AGCTGTAACGGTTCTAGTGCATATA 59.699 40.000 0.00 0.00 0.00 0.86
5053 6830 1.068588 GTTTGTTGGTCTTTGGGAGGC 59.931 52.381 0.00 0.00 0.00 4.70
5063 6840 1.069049 CTTTGGGAGGCAAGTGGTTTG 59.931 52.381 0.00 0.00 39.88 2.93
5091 6868 3.382865 CCATCCATCTCTCTCTTGACGAA 59.617 47.826 0.00 0.00 0.00 3.85
5109 6886 3.182967 CGAAGAGATGCCACAAGTAGTC 58.817 50.000 0.00 0.00 0.00 2.59
5110 6887 2.949451 AGAGATGCCACAAGTAGTCG 57.051 50.000 0.00 0.00 0.00 4.18
5111 6888 2.171840 AGAGATGCCACAAGTAGTCGT 58.828 47.619 0.00 0.00 0.00 4.34
5152 6929 5.263968 ACATCTTCGTTTACCTGATCGAT 57.736 39.130 0.00 0.00 32.54 3.59
5178 6955 3.260884 CACGGCCAATATACCCATCTAGT 59.739 47.826 2.24 0.00 0.00 2.57
5179 6956 4.464951 CACGGCCAATATACCCATCTAGTA 59.535 45.833 2.24 0.00 0.00 1.82
5180 6957 4.710375 ACGGCCAATATACCCATCTAGTAG 59.290 45.833 2.24 0.00 0.00 2.57
5290 7067 2.233922 ACGGGTGTCACTCCTAATTGAG 59.766 50.000 2.35 0.00 38.37 3.02
5303 7080 7.068103 CACTCCTAATTGAGATACTCTGTCTGT 59.932 40.741 0.07 0.00 36.22 3.41
5398 7176 3.121030 CTTGAGCTCGCGGGTTGG 61.121 66.667 8.30 0.00 0.00 3.77
5463 7250 2.930826 TTGGACCAAGACTCAAGACC 57.069 50.000 1.69 0.00 0.00 3.85
5466 7253 1.609320 GGACCAAGACTCAAGACCAGC 60.609 57.143 0.00 0.00 0.00 4.85
5468 7255 1.771255 ACCAAGACTCAAGACCAGCTT 59.229 47.619 0.00 0.00 37.29 3.74
5471 7258 3.209410 CAAGACTCAAGACCAGCTTTGT 58.791 45.455 0.00 0.00 33.60 2.83
5476 7263 2.421424 CTCAAGACCAGCTTTGTATGGC 59.579 50.000 0.00 0.00 40.45 4.40
5550 7338 1.081892 CAGCTGGTGTCGAGGAATTG 58.918 55.000 5.57 0.00 0.00 2.32
5568 7356 3.536158 TTGCGTGCTCACAGTTTTATC 57.464 42.857 0.69 0.00 0.00 1.75
5578 7366 6.138761 GCTCACAGTTTTATCTTGACAAGTG 58.861 40.000 14.75 6.62 0.00 3.16
5581 7370 6.318648 TCACAGTTTTATCTTGACAAGTGCTT 59.681 34.615 14.75 2.30 0.00 3.91
5593 7382 4.697828 TGACAAGTGCTTCTACAACAACAA 59.302 37.500 0.00 0.00 0.00 2.83
5594 7383 4.981794 ACAAGTGCTTCTACAACAACAAC 58.018 39.130 0.00 0.00 0.00 3.32
5595 7384 4.457603 ACAAGTGCTTCTACAACAACAACA 59.542 37.500 0.00 0.00 0.00 3.33
5596 7385 4.882671 AGTGCTTCTACAACAACAACAG 57.117 40.909 0.00 0.00 0.00 3.16
5597 7386 3.065371 AGTGCTTCTACAACAACAACAGC 59.935 43.478 0.00 0.00 0.00 4.40
5598 7387 3.013219 TGCTTCTACAACAACAACAGCA 58.987 40.909 0.00 0.00 33.69 4.41
5599 7388 3.631686 TGCTTCTACAACAACAACAGCAT 59.368 39.130 0.00 0.00 31.17 3.79
5600 7389 3.976942 GCTTCTACAACAACAACAGCATG 59.023 43.478 0.00 0.00 46.00 4.06
5601 7390 4.261155 GCTTCTACAACAACAACAGCATGA 60.261 41.667 0.00 0.00 39.69 3.07
5602 7391 5.563475 GCTTCTACAACAACAACAGCATGAT 60.563 40.000 0.00 0.00 39.69 2.45
5603 7392 5.361135 TCTACAACAACAACAGCATGATG 57.639 39.130 9.94 9.94 45.28 3.07
5604 7393 3.374220 ACAACAACAACAGCATGATGG 57.626 42.857 16.55 0.36 43.92 3.51
5605 7394 2.063266 CAACAACAACAGCATGATGGC 58.937 47.619 16.55 0.00 43.92 4.40
5606 7395 1.624336 ACAACAACAGCATGATGGCT 58.376 45.000 16.55 0.00 43.92 4.75
5633 7422 2.229675 TCACTAAGATGCAGATGCCG 57.770 50.000 1.72 0.00 41.18 5.69
5636 7425 0.107456 CTAAGATGCAGATGCCGGGT 59.893 55.000 2.18 0.00 41.18 5.28
5637 7426 0.546122 TAAGATGCAGATGCCGGGTT 59.454 50.000 2.18 0.00 41.18 4.11
5639 7428 0.546122 AGATGCAGATGCCGGGTTTA 59.454 50.000 2.18 0.00 41.18 2.01
5640 7429 1.064758 AGATGCAGATGCCGGGTTTAA 60.065 47.619 2.18 0.00 41.18 1.52
5641 7430 1.065551 GATGCAGATGCCGGGTTTAAC 59.934 52.381 2.18 0.00 41.18 2.01
5642 7431 0.037590 TGCAGATGCCGGGTTTAACT 59.962 50.000 2.18 0.00 41.18 2.24
5643 7432 1.173913 GCAGATGCCGGGTTTAACTT 58.826 50.000 2.18 0.00 34.31 2.66
5647 7436 3.506067 CAGATGCCGGGTTTAACTTCTTT 59.494 43.478 2.18 0.00 0.00 2.52
5650 7439 4.048241 TGCCGGGTTTAACTTCTTTTTG 57.952 40.909 2.18 0.00 0.00 2.44
5651 7440 3.700038 TGCCGGGTTTAACTTCTTTTTGA 59.300 39.130 2.18 0.00 0.00 2.69
5652 7441 4.159879 TGCCGGGTTTAACTTCTTTTTGAA 59.840 37.500 2.18 0.00 0.00 2.69
5656 7447 7.201661 GCCGGGTTTAACTTCTTTTTGAAAAAT 60.202 33.333 2.18 0.00 33.79 1.82
5689 7480 6.845302 TCATGAACATGAACATTTGCTACTC 58.155 36.000 14.00 0.00 44.14 2.59
5690 7481 5.627499 TGAACATGAACATTTGCTACTCC 57.373 39.130 0.00 0.00 0.00 3.85
5691 7482 4.458989 TGAACATGAACATTTGCTACTCCC 59.541 41.667 0.00 0.00 0.00 4.30
5692 7483 4.307032 ACATGAACATTTGCTACTCCCT 57.693 40.909 0.00 0.00 0.00 4.20
5693 7484 4.265073 ACATGAACATTTGCTACTCCCTC 58.735 43.478 0.00 0.00 0.00 4.30
5694 7485 3.350219 TGAACATTTGCTACTCCCTCC 57.650 47.619 0.00 0.00 0.00 4.30
5695 7486 2.280628 GAACATTTGCTACTCCCTCCG 58.719 52.381 0.00 0.00 0.00 4.63
5696 7487 1.276622 ACATTTGCTACTCCCTCCGT 58.723 50.000 0.00 0.00 0.00 4.69
5697 7488 1.207329 ACATTTGCTACTCCCTCCGTC 59.793 52.381 0.00 0.00 0.00 4.79
5698 7489 0.831307 ATTTGCTACTCCCTCCGTCC 59.169 55.000 0.00 0.00 0.00 4.79
5699 7490 1.262640 TTTGCTACTCCCTCCGTCCC 61.263 60.000 0.00 0.00 0.00 4.46
5700 7491 3.217743 GCTACTCCCTCCGTCCCG 61.218 72.222 0.00 0.00 0.00 5.14
5701 7492 2.274760 CTACTCCCTCCGTCCCGT 59.725 66.667 0.00 0.00 0.00 5.28
5702 7493 1.528824 CTACTCCCTCCGTCCCGTA 59.471 63.158 0.00 0.00 0.00 4.02
5703 7494 0.107017 CTACTCCCTCCGTCCCGTAA 60.107 60.000 0.00 0.00 0.00 3.18
5704 7495 0.552848 TACTCCCTCCGTCCCGTAAT 59.447 55.000 0.00 0.00 0.00 1.89
5705 7496 0.552848 ACTCCCTCCGTCCCGTAATA 59.447 55.000 0.00 0.00 0.00 0.98
5706 7497 1.146566 ACTCCCTCCGTCCCGTAATAT 59.853 52.381 0.00 0.00 0.00 1.28
5707 7498 2.376518 ACTCCCTCCGTCCCGTAATATA 59.623 50.000 0.00 0.00 0.00 0.86
5708 7499 3.181429 ACTCCCTCCGTCCCGTAATATAA 60.181 47.826 0.00 0.00 0.00 0.98
5709 7500 3.424703 TCCCTCCGTCCCGTAATATAAG 58.575 50.000 0.00 0.00 0.00 1.73
5710 7501 3.074390 TCCCTCCGTCCCGTAATATAAGA 59.926 47.826 0.00 0.00 0.00 2.10
5711 7502 3.828451 CCCTCCGTCCCGTAATATAAGAA 59.172 47.826 0.00 0.00 0.00 2.52
5712 7503 4.321527 CCCTCCGTCCCGTAATATAAGAAC 60.322 50.000 0.00 0.00 0.00 3.01
5713 7504 4.470462 CTCCGTCCCGTAATATAAGAACG 58.530 47.826 0.00 0.00 36.42 3.95
5714 7505 3.882888 TCCGTCCCGTAATATAAGAACGT 59.117 43.478 0.00 0.00 34.90 3.99
5715 7506 4.338118 TCCGTCCCGTAATATAAGAACGTT 59.662 41.667 0.00 0.00 34.90 3.99
5716 7507 5.043248 CCGTCCCGTAATATAAGAACGTTT 58.957 41.667 0.46 0.00 34.90 3.60
5717 7508 5.051508 CCGTCCCGTAATATAAGAACGTTTG 60.052 44.000 0.46 0.00 34.90 2.93
5718 7509 5.516339 CGTCCCGTAATATAAGAACGTTTGT 59.484 40.000 0.46 0.00 34.90 2.83
5719 7510 6.690957 CGTCCCGTAATATAAGAACGTTTGTA 59.309 38.462 0.46 0.00 34.90 2.41
5720 7511 7.096885 CGTCCCGTAATATAAGAACGTTTGTAG 60.097 40.741 0.46 0.00 34.90 2.74
5721 7512 7.702348 GTCCCGTAATATAAGAACGTTTGTAGT 59.298 37.037 0.46 0.00 34.90 2.73
5722 7513 7.701924 TCCCGTAATATAAGAACGTTTGTAGTG 59.298 37.037 0.46 0.00 34.90 2.74
5723 7514 7.489113 CCCGTAATATAAGAACGTTTGTAGTGT 59.511 37.037 0.46 0.00 34.90 3.55
5724 7515 8.526681 CCGTAATATAAGAACGTTTGTAGTGTC 58.473 37.037 0.46 0.00 34.90 3.67
5725 7516 9.064804 CGTAATATAAGAACGTTTGTAGTGTCA 57.935 33.333 0.46 0.00 32.16 3.58
5730 7521 8.831000 ATAAGAACGTTTGTAGTGTCAAAAAC 57.169 30.769 0.46 0.00 38.71 2.43
5734 7525 5.579212 CGTTTGTAGTGTCAAAAACGTTC 57.421 39.130 0.00 0.00 45.89 3.95
5735 7526 5.318349 CGTTTGTAGTGTCAAAAACGTTCT 58.682 37.500 0.00 0.00 45.89 3.01
5736 7527 5.791480 CGTTTGTAGTGTCAAAAACGTTCTT 59.209 36.000 0.00 0.00 45.89 2.52
5737 7528 6.954852 CGTTTGTAGTGTCAAAAACGTTCTTA 59.045 34.615 0.00 0.00 45.89 2.10
5738 7529 7.637132 CGTTTGTAGTGTCAAAAACGTTCTTAT 59.363 33.333 0.00 0.00 45.89 1.73
5739 7530 9.919348 GTTTGTAGTGTCAAAAACGTTCTTATA 57.081 29.630 0.00 0.00 38.71 0.98
5746 7537 9.498307 GTGTCAAAAACGTTCTTATATTATGGG 57.502 33.333 0.00 0.00 0.00 4.00
5747 7538 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
5748 7539 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
5749 7540 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
5750 7541 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
5751 7542 5.796424 ACGTTCTTATATTATGGGACGGT 57.204 39.130 13.18 0.00 0.00 4.83
5752 7543 5.535333 ACGTTCTTATATTATGGGACGGTG 58.465 41.667 13.18 0.00 0.00 4.94
5753 7544 4.927425 CGTTCTTATATTATGGGACGGTGG 59.073 45.833 0.00 0.00 0.00 4.61
5754 7545 5.243207 GTTCTTATATTATGGGACGGTGGG 58.757 45.833 0.00 0.00 0.00 4.61
5755 7546 4.754311 TCTTATATTATGGGACGGTGGGA 58.246 43.478 0.00 0.00 0.00 4.37
5756 7547 5.156649 TCTTATATTATGGGACGGTGGGAA 58.843 41.667 0.00 0.00 0.00 3.97
5757 7548 5.788533 TCTTATATTATGGGACGGTGGGAAT 59.211 40.000 0.00 0.00 0.00 3.01
5758 7549 6.961131 TCTTATATTATGGGACGGTGGGAATA 59.039 38.462 0.00 0.00 0.00 1.75
5759 7550 3.782656 ATTATGGGACGGTGGGAATAC 57.217 47.619 0.00 0.00 0.00 1.89
5760 7551 2.482414 TATGGGACGGTGGGAATACT 57.518 50.000 0.00 0.00 0.00 2.12
5761 7552 1.591768 ATGGGACGGTGGGAATACTT 58.408 50.000 0.00 0.00 0.00 2.24
5762 7553 1.364269 TGGGACGGTGGGAATACTTT 58.636 50.000 0.00 0.00 0.00 2.66
5763 7554 2.549082 TGGGACGGTGGGAATACTTTA 58.451 47.619 0.00 0.00 0.00 1.85
5764 7555 2.236893 TGGGACGGTGGGAATACTTTAC 59.763 50.000 0.00 0.00 0.00 2.01
5765 7556 2.236893 GGGACGGTGGGAATACTTTACA 59.763 50.000 0.00 0.00 0.00 2.41
5766 7557 3.307621 GGGACGGTGGGAATACTTTACAA 60.308 47.826 0.00 0.00 0.00 2.41
5767 7558 3.937079 GGACGGTGGGAATACTTTACAAG 59.063 47.826 0.00 0.00 0.00 3.16
5768 7559 3.340928 ACGGTGGGAATACTTTACAAGC 58.659 45.455 0.00 0.00 0.00 4.01
5769 7560 3.244630 ACGGTGGGAATACTTTACAAGCA 60.245 43.478 0.00 0.00 0.00 3.91
5770 7561 3.754323 CGGTGGGAATACTTTACAAGCAA 59.246 43.478 0.00 0.00 0.00 3.91
5771 7562 4.379082 CGGTGGGAATACTTTACAAGCAAC 60.379 45.833 0.00 0.00 0.00 4.17
5772 7563 4.521256 GGTGGGAATACTTTACAAGCAACA 59.479 41.667 0.00 0.00 0.00 3.33
5773 7564 5.010213 GGTGGGAATACTTTACAAGCAACAA 59.990 40.000 0.00 0.00 0.00 2.83
5774 7565 6.461788 GGTGGGAATACTTTACAAGCAACAAA 60.462 38.462 0.00 0.00 0.00 2.83
5775 7566 7.151976 GTGGGAATACTTTACAAGCAACAAAT 58.848 34.615 0.00 0.00 0.00 2.32
5776 7567 7.655732 GTGGGAATACTTTACAAGCAACAAATT 59.344 33.333 0.00 0.00 0.00 1.82
5777 7568 8.861086 TGGGAATACTTTACAAGCAACAAATTA 58.139 29.630 0.00 0.00 0.00 1.40
5778 7569 9.699703 GGGAATACTTTACAAGCAACAAATTAA 57.300 29.630 0.00 0.00 0.00 1.40
5782 7573 7.420184 ACTTTACAAGCAACAAATTAATGGC 57.580 32.000 0.00 0.00 0.00 4.40
5783 7574 6.145371 ACTTTACAAGCAACAAATTAATGGCG 59.855 34.615 0.00 0.00 0.00 5.69
5784 7575 3.988819 ACAAGCAACAAATTAATGGCGT 58.011 36.364 0.00 0.00 0.00 5.68
5785 7576 4.376146 ACAAGCAACAAATTAATGGCGTT 58.624 34.783 0.00 0.00 0.00 4.84
5786 7577 4.210955 ACAAGCAACAAATTAATGGCGTTG 59.789 37.500 15.47 15.47 39.89 4.10
5787 7578 3.988819 AGCAACAAATTAATGGCGTTGT 58.011 36.364 18.59 10.48 39.27 3.32
5788 7579 5.127693 AGCAACAAATTAATGGCGTTGTA 57.872 34.783 18.59 0.00 39.27 2.41
5789 7580 5.719173 AGCAACAAATTAATGGCGTTGTAT 58.281 33.333 18.59 10.32 39.27 2.29
5790 7581 5.576384 AGCAACAAATTAATGGCGTTGTATG 59.424 36.000 18.59 12.91 39.27 2.39
5791 7582 5.220378 GCAACAAATTAATGGCGTTGTATGG 60.220 40.000 18.59 8.49 39.27 2.74
5792 7583 5.906113 ACAAATTAATGGCGTTGTATGGA 57.094 34.783 1.27 0.00 32.58 3.41
5793 7584 5.890334 ACAAATTAATGGCGTTGTATGGAG 58.110 37.500 1.27 0.00 32.58 3.86
5794 7585 5.650266 ACAAATTAATGGCGTTGTATGGAGA 59.350 36.000 1.27 0.00 32.58 3.71
5795 7586 6.321181 ACAAATTAATGGCGTTGTATGGAGAT 59.679 34.615 1.27 0.00 32.58 2.75
5796 7587 5.947228 ATTAATGGCGTTGTATGGAGATG 57.053 39.130 1.27 0.00 0.00 2.90
5797 7588 3.558931 AATGGCGTTGTATGGAGATGA 57.441 42.857 0.00 0.00 0.00 2.92
5798 7589 3.558931 ATGGCGTTGTATGGAGATGAA 57.441 42.857 0.00 0.00 0.00 2.57
5799 7590 3.342377 TGGCGTTGTATGGAGATGAAA 57.658 42.857 0.00 0.00 0.00 2.69
5800 7591 3.006940 TGGCGTTGTATGGAGATGAAAC 58.993 45.455 0.00 0.00 0.00 2.78
5801 7592 3.006940 GGCGTTGTATGGAGATGAAACA 58.993 45.455 0.00 0.00 0.00 2.83
5802 7593 3.181510 GGCGTTGTATGGAGATGAAACAC 60.182 47.826 0.00 0.00 0.00 3.32
5803 7594 3.435327 GCGTTGTATGGAGATGAAACACA 59.565 43.478 0.00 0.00 0.00 3.72
5804 7595 4.094887 GCGTTGTATGGAGATGAAACACAT 59.905 41.667 0.00 0.00 42.47 3.21
5805 7596 5.293324 GCGTTGTATGGAGATGAAACACATA 59.707 40.000 0.00 0.00 39.56 2.29
5806 7597 6.705782 CGTTGTATGGAGATGAAACACATAC 58.294 40.000 0.00 0.00 42.43 2.39
5807 7598 6.535150 CGTTGTATGGAGATGAAACACATACT 59.465 38.462 12.53 0.00 42.51 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.496817 CCGTCACCTGCCTCTAGC 59.503 66.667 0.00 0.00 44.14 3.42
6 7 1.682684 ACCCGTCACCTGCCTCTAG 60.683 63.158 0.00 0.00 0.00 2.43
7 8 1.982395 CACCCGTCACCTGCCTCTA 60.982 63.158 0.00 0.00 0.00 2.43
8 9 3.314331 CACCCGTCACCTGCCTCT 61.314 66.667 0.00 0.00 0.00 3.69
9 10 3.178540 AACACCCGTCACCTGCCTC 62.179 63.158 0.00 0.00 0.00 4.70
10 11 3.168528 AACACCCGTCACCTGCCT 61.169 61.111 0.00 0.00 0.00 4.75
11 12 2.978010 CAACACCCGTCACCTGCC 60.978 66.667 0.00 0.00 0.00 4.85
12 13 2.978010 CCAACACCCGTCACCTGC 60.978 66.667 0.00 0.00 0.00 4.85
13 14 1.891919 CACCAACACCCGTCACCTG 60.892 63.158 0.00 0.00 0.00 4.00
14 15 2.319890 GACACCAACACCCGTCACCT 62.320 60.000 0.00 0.00 0.00 4.00
15 16 1.890510 GACACCAACACCCGTCACC 60.891 63.158 0.00 0.00 0.00 4.02
16 17 0.745128 TTGACACCAACACCCGTCAC 60.745 55.000 0.00 0.00 38.07 3.67
17 18 0.462937 CTTGACACCAACACCCGTCA 60.463 55.000 0.00 0.00 36.63 4.35
18 19 1.782028 GCTTGACACCAACACCCGTC 61.782 60.000 0.00 0.00 0.00 4.79
19 20 1.822186 GCTTGACACCAACACCCGT 60.822 57.895 0.00 0.00 0.00 5.28
20 21 1.101049 AAGCTTGACACCAACACCCG 61.101 55.000 0.00 0.00 0.00 5.28
21 22 1.880027 CTAAGCTTGACACCAACACCC 59.120 52.381 9.86 0.00 0.00 4.61
22 23 2.846193 TCTAAGCTTGACACCAACACC 58.154 47.619 9.86 0.00 0.00 4.16
23 24 6.743575 AATATCTAAGCTTGACACCAACAC 57.256 37.500 9.86 0.00 0.00 3.32
24 25 7.168219 AGAAATATCTAAGCTTGACACCAACA 58.832 34.615 9.86 0.00 32.88 3.33
25 26 7.617041 AGAAATATCTAAGCTTGACACCAAC 57.383 36.000 9.86 0.00 32.88 3.77
26 27 7.064609 CGAAGAAATATCTAAGCTTGACACCAA 59.935 37.037 9.86 0.00 33.77 3.67
27 28 6.535150 CGAAGAAATATCTAAGCTTGACACCA 59.465 38.462 9.86 0.00 33.77 4.17
28 29 6.018669 CCGAAGAAATATCTAAGCTTGACACC 60.019 42.308 9.86 0.00 33.77 4.16
29 30 6.535508 ACCGAAGAAATATCTAAGCTTGACAC 59.464 38.462 9.86 0.00 33.77 3.67
30 31 6.640518 ACCGAAGAAATATCTAAGCTTGACA 58.359 36.000 9.86 0.00 33.77 3.58
31 32 6.981559 AGACCGAAGAAATATCTAAGCTTGAC 59.018 38.462 9.86 0.00 33.77 3.18
32 33 7.113658 AGACCGAAGAAATATCTAAGCTTGA 57.886 36.000 9.86 5.12 33.77 3.02
33 34 7.278868 ACAAGACCGAAGAAATATCTAAGCTTG 59.721 37.037 9.86 0.00 33.77 4.01
34 35 7.331791 ACAAGACCGAAGAAATATCTAAGCTT 58.668 34.615 3.48 3.48 33.77 3.74
35 36 6.879400 ACAAGACCGAAGAAATATCTAAGCT 58.121 36.000 0.00 0.00 33.77 3.74
36 37 7.541122 AACAAGACCGAAGAAATATCTAAGC 57.459 36.000 0.00 0.00 33.77 3.09
37 38 8.936864 ACAAACAAGACCGAAGAAATATCTAAG 58.063 33.333 0.00 0.00 33.77 2.18
38 39 8.842358 ACAAACAAGACCGAAGAAATATCTAA 57.158 30.769 0.00 0.00 33.77 2.10
40 41 9.449719 AATACAAACAAGACCGAAGAAATATCT 57.550 29.630 0.00 0.00 37.57 1.98
45 46 9.505995 GTAAAAATACAAACAAGACCGAAGAAA 57.494 29.630 0.00 0.00 0.00 2.52
46 47 8.895737 AGTAAAAATACAAACAAGACCGAAGAA 58.104 29.630 0.00 0.00 0.00 2.52
47 48 8.441312 AGTAAAAATACAAACAAGACCGAAGA 57.559 30.769 0.00 0.00 0.00 2.87
48 49 9.166126 GAAGTAAAAATACAAACAAGACCGAAG 57.834 33.333 0.00 0.00 0.00 3.79
49 50 8.895737 AGAAGTAAAAATACAAACAAGACCGAA 58.104 29.630 0.00 0.00 0.00 4.30
50 51 8.441312 AGAAGTAAAAATACAAACAAGACCGA 57.559 30.769 0.00 0.00 0.00 4.69
51 52 8.953990 CAAGAAGTAAAAATACAAACAAGACCG 58.046 33.333 0.00 0.00 0.00 4.79
52 53 9.244799 CCAAGAAGTAAAAATACAAACAAGACC 57.755 33.333 0.00 0.00 0.00 3.85
53 54 8.752254 GCCAAGAAGTAAAAATACAAACAAGAC 58.248 33.333 0.00 0.00 0.00 3.01
54 55 8.691797 AGCCAAGAAGTAAAAATACAAACAAGA 58.308 29.630 0.00 0.00 0.00 3.02
55 56 8.755018 CAGCCAAGAAGTAAAAATACAAACAAG 58.245 33.333 0.00 0.00 0.00 3.16
56 57 7.708752 CCAGCCAAGAAGTAAAAATACAAACAA 59.291 33.333 0.00 0.00 0.00 2.83
57 58 7.147811 ACCAGCCAAGAAGTAAAAATACAAACA 60.148 33.333 0.00 0.00 0.00 2.83
58 59 7.169140 CACCAGCCAAGAAGTAAAAATACAAAC 59.831 37.037 0.00 0.00 0.00 2.93
59 60 7.206687 CACCAGCCAAGAAGTAAAAATACAAA 58.793 34.615 0.00 0.00 0.00 2.83
60 61 6.737346 GCACCAGCCAAGAAGTAAAAATACAA 60.737 38.462 0.00 0.00 33.58 2.41
61 62 5.278758 GCACCAGCCAAGAAGTAAAAATACA 60.279 40.000 0.00 0.00 33.58 2.29
62 63 5.048013 AGCACCAGCCAAGAAGTAAAAATAC 60.048 40.000 0.00 0.00 43.56 1.89
63 64 5.076873 AGCACCAGCCAAGAAGTAAAAATA 58.923 37.500 0.00 0.00 43.56 1.40
64 65 3.897505 AGCACCAGCCAAGAAGTAAAAAT 59.102 39.130 0.00 0.00 43.56 1.82
65 66 3.295973 AGCACCAGCCAAGAAGTAAAAA 58.704 40.909 0.00 0.00 43.56 1.94
68 69 1.271379 GGAGCACCAGCCAAGAAGTAA 60.271 52.381 0.00 0.00 43.56 2.24
74 75 0.825010 ACAAAGGAGCACCAGCCAAG 60.825 55.000 2.07 0.00 43.56 3.61
78 79 1.737355 TTGCACAAAGGAGCACCAGC 61.737 55.000 2.07 0.00 40.39 4.85
100 101 6.285061 ACTTAAAAAGTTGCGAAACGCTAGC 61.285 40.000 16.48 4.06 44.09 3.42
101 102 5.202640 ACTTAAAAAGTTGCGAAACGCTAG 58.797 37.500 16.48 0.00 44.09 3.42
227 228 9.834628 CGTGTATTGAAAAATGTTTACCATACT 57.165 29.630 5.99 0.00 31.97 2.12
228 229 9.828852 TCGTGTATTGAAAAATGTTTACCATAC 57.171 29.630 0.00 0.00 31.97 2.39
229 230 9.828852 GTCGTGTATTGAAAAATGTTTACCATA 57.171 29.630 0.00 0.00 31.97 2.74
392 396 9.117183 GACAAATATTTAGAAACGGAGGGTTAT 57.883 33.333 0.00 0.00 38.08 1.89
393 397 8.323567 AGACAAATATTTAGAAACGGAGGGTTA 58.676 33.333 0.00 0.00 38.08 2.85
394 398 7.173032 AGACAAATATTTAGAAACGGAGGGTT 58.827 34.615 0.00 0.00 41.76 4.11
395 399 6.718294 AGACAAATATTTAGAAACGGAGGGT 58.282 36.000 0.00 0.00 0.00 4.34
396 400 7.625828 AAGACAAATATTTAGAAACGGAGGG 57.374 36.000 0.00 0.00 0.00 4.30
397 401 8.947115 AGAAAGACAAATATTTAGAAACGGAGG 58.053 33.333 0.00 0.00 0.00 4.30
412 416 9.971922 CAATTTGAAACCTCTAGAAAGACAAAT 57.028 29.630 13.64 13.64 37.14 2.32
413 417 8.966868 ACAATTTGAAACCTCTAGAAAGACAAA 58.033 29.630 2.79 4.41 0.00 2.83
414 418 8.405531 CACAATTTGAAACCTCTAGAAAGACAA 58.594 33.333 2.79 0.00 0.00 3.18
415 419 7.773224 TCACAATTTGAAACCTCTAGAAAGACA 59.227 33.333 2.79 0.00 0.00 3.41
416 420 8.070769 GTCACAATTTGAAACCTCTAGAAAGAC 58.929 37.037 2.79 0.00 35.39 3.01
417 421 7.993183 AGTCACAATTTGAAACCTCTAGAAAGA 59.007 33.333 2.79 0.00 35.39 2.52
418 422 8.159344 AGTCACAATTTGAAACCTCTAGAAAG 57.841 34.615 2.79 0.00 35.39 2.62
419 423 9.052759 GTAGTCACAATTTGAAACCTCTAGAAA 57.947 33.333 2.79 0.00 35.39 2.52
420 424 8.208224 TGTAGTCACAATTTGAAACCTCTAGAA 58.792 33.333 2.79 0.00 35.39 2.10
421 425 7.732025 TGTAGTCACAATTTGAAACCTCTAGA 58.268 34.615 2.79 0.00 35.39 2.43
422 426 7.962964 TGTAGTCACAATTTGAAACCTCTAG 57.037 36.000 2.79 0.00 35.39 2.43
423 427 9.431887 GTATGTAGTCACAATTTGAAACCTCTA 57.568 33.333 2.79 0.00 38.42 2.43
424 428 7.117812 CGTATGTAGTCACAATTTGAAACCTCT 59.882 37.037 2.79 0.00 38.42 3.69
425 429 7.234384 CGTATGTAGTCACAATTTGAAACCTC 58.766 38.462 2.79 0.00 38.42 3.85
426 430 6.148811 CCGTATGTAGTCACAATTTGAAACCT 59.851 38.462 2.79 0.00 38.42 3.50
427 431 6.148150 TCCGTATGTAGTCACAATTTGAAACC 59.852 38.462 2.79 0.00 38.42 3.27
428 432 7.124347 TCCGTATGTAGTCACAATTTGAAAC 57.876 36.000 2.79 0.99 38.42 2.78
429 433 7.226918 TGTTCCGTATGTAGTCACAATTTGAAA 59.773 33.333 2.79 0.00 38.42 2.69
430 434 6.706716 TGTTCCGTATGTAGTCACAATTTGAA 59.293 34.615 2.79 0.00 38.42 2.69
431 435 6.224584 TGTTCCGTATGTAGTCACAATTTGA 58.775 36.000 2.79 0.00 38.42 2.69
432 436 6.474819 TGTTCCGTATGTAGTCACAATTTG 57.525 37.500 0.00 0.00 38.42 2.32
433 437 7.499321 TTTGTTCCGTATGTAGTCACAATTT 57.501 32.000 0.00 0.00 38.42 1.82
434 438 7.681939 ATTTGTTCCGTATGTAGTCACAATT 57.318 32.000 0.00 0.00 38.42 2.32
435 439 7.389330 TCAATTTGTTCCGTATGTAGTCACAAT 59.611 33.333 0.00 0.00 38.42 2.71
436 440 6.706716 TCAATTTGTTCCGTATGTAGTCACAA 59.293 34.615 0.00 0.00 38.42 3.33
437 441 6.224584 TCAATTTGTTCCGTATGTAGTCACA 58.775 36.000 0.00 0.00 39.52 3.58
438 442 6.367969 ACTCAATTTGTTCCGTATGTAGTCAC 59.632 38.462 0.00 0.00 0.00 3.67
439 443 6.367695 CACTCAATTTGTTCCGTATGTAGTCA 59.632 38.462 0.00 0.00 0.00 3.41
440 444 6.588756 TCACTCAATTTGTTCCGTATGTAGTC 59.411 38.462 0.00 0.00 0.00 2.59
441 445 6.460781 TCACTCAATTTGTTCCGTATGTAGT 58.539 36.000 0.00 0.00 0.00 2.73
442 446 6.961359 TCACTCAATTTGTTCCGTATGTAG 57.039 37.500 0.00 0.00 0.00 2.74
443 447 7.822334 AGATTCACTCAATTTGTTCCGTATGTA 59.178 33.333 0.00 0.00 0.00 2.29
444 448 6.655003 AGATTCACTCAATTTGTTCCGTATGT 59.345 34.615 0.00 0.00 0.00 2.29
445 449 7.076842 AGATTCACTCAATTTGTTCCGTATG 57.923 36.000 0.00 0.00 0.00 2.39
446 450 7.822334 TGTAGATTCACTCAATTTGTTCCGTAT 59.178 33.333 0.00 0.00 0.00 3.06
447 451 7.117236 GTGTAGATTCACTCAATTTGTTCCGTA 59.883 37.037 0.00 0.00 35.68 4.02
448 452 5.995282 TGTAGATTCACTCAATTTGTTCCGT 59.005 36.000 0.00 0.00 0.00 4.69
449 453 6.147821 AGTGTAGATTCACTCAATTTGTTCCG 59.852 38.462 0.00 0.00 44.07 4.30
450 454 7.440523 AGTGTAGATTCACTCAATTTGTTCC 57.559 36.000 0.00 0.00 44.07 3.62
480 484 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
481 485 8.899771 CACCACATACGGATGTATATAGACATA 58.100 37.037 14.23 0.00 44.82 2.29
482 486 7.614192 TCACCACATACGGATGTATATAGACAT 59.386 37.037 14.23 12.70 44.82 3.06
483 487 6.943718 TCACCACATACGGATGTATATAGACA 59.056 38.462 14.23 2.07 44.82 3.41
484 488 7.387119 TCACCACATACGGATGTATATAGAC 57.613 40.000 14.23 0.00 44.82 2.59
485 489 7.832187 TGATCACCACATACGGATGTATATAGA 59.168 37.037 14.23 7.88 44.82 1.98
486 490 7.996385 TGATCACCACATACGGATGTATATAG 58.004 38.462 14.23 0.00 44.82 1.31
487 491 7.948034 TGATCACCACATACGGATGTATATA 57.052 36.000 14.23 0.00 44.82 0.86
488 492 6.850752 TGATCACCACATACGGATGTATAT 57.149 37.500 14.23 4.54 44.82 0.86
489 493 6.850752 ATGATCACCACATACGGATGTATA 57.149 37.500 14.23 0.00 44.82 1.47
490 494 5.745312 ATGATCACCACATACGGATGTAT 57.255 39.130 14.23 2.79 44.82 2.29
491 495 5.545063 AATGATCACCACATACGGATGTA 57.455 39.130 14.23 0.00 44.82 2.29
493 497 4.815846 TCAAATGATCACCACATACGGATG 59.184 41.667 5.94 5.94 39.16 3.51
494 498 5.034852 TCAAATGATCACCACATACGGAT 57.965 39.130 0.00 0.00 0.00 4.18
495 499 4.479786 TCAAATGATCACCACATACGGA 57.520 40.909 0.00 0.00 0.00 4.69
496 500 5.559427 TTTCAAATGATCACCACATACGG 57.441 39.130 0.00 0.00 0.00 4.02
497 501 7.011763 AGAGATTTCAAATGATCACCACATACG 59.988 37.037 0.00 0.00 0.00 3.06
498 502 8.218338 AGAGATTTCAAATGATCACCACATAC 57.782 34.615 0.00 0.00 0.00 2.39
499 503 9.551734 CTAGAGATTTCAAATGATCACCACATA 57.448 33.333 0.00 0.00 0.00 2.29
500 504 8.270030 TCTAGAGATTTCAAATGATCACCACAT 58.730 33.333 0.00 0.00 0.00 3.21
501 505 7.623630 TCTAGAGATTTCAAATGATCACCACA 58.376 34.615 0.00 0.00 0.00 4.17
502 506 8.498054 TTCTAGAGATTTCAAATGATCACCAC 57.502 34.615 0.00 0.00 0.00 4.16
503 507 9.170734 CTTTCTAGAGATTTCAAATGATCACCA 57.829 33.333 0.00 0.00 0.00 4.17
504 508 9.388506 TCTTTCTAGAGATTTCAAATGATCACC 57.611 33.333 0.00 0.00 0.00 4.02
506 510 9.948964 TGTCTTTCTAGAGATTTCAAATGATCA 57.051 29.630 0.00 0.00 0.00 2.92
520 524 9.672086 CGTTCCTAAATATCTGTCTTTCTAGAG 57.328 37.037 0.00 0.00 0.00 2.43
521 525 8.630917 CCGTTCCTAAATATCTGTCTTTCTAGA 58.369 37.037 0.00 0.00 0.00 2.43
522 526 8.630917 TCCGTTCCTAAATATCTGTCTTTCTAG 58.369 37.037 0.00 0.00 0.00 2.43
523 527 8.529424 TCCGTTCCTAAATATCTGTCTTTCTA 57.471 34.615 0.00 0.00 0.00 2.10
524 528 7.418025 CCTCCGTTCCTAAATATCTGTCTTTCT 60.418 40.741 0.00 0.00 0.00 2.52
525 529 6.702282 CCTCCGTTCCTAAATATCTGTCTTTC 59.298 42.308 0.00 0.00 0.00 2.62
526 530 6.408206 CCCTCCGTTCCTAAATATCTGTCTTT 60.408 42.308 0.00 0.00 0.00 2.52
527 531 5.070580 CCCTCCGTTCCTAAATATCTGTCTT 59.929 44.000 0.00 0.00 0.00 3.01
528 532 4.589374 CCCTCCGTTCCTAAATATCTGTCT 59.411 45.833 0.00 0.00 0.00 3.41
529 533 4.587684 TCCCTCCGTTCCTAAATATCTGTC 59.412 45.833 0.00 0.00 0.00 3.51
530 534 4.553678 TCCCTCCGTTCCTAAATATCTGT 58.446 43.478 0.00 0.00 0.00 3.41
531 535 4.589374 ACTCCCTCCGTTCCTAAATATCTG 59.411 45.833 0.00 0.00 0.00 2.90
532 536 4.817286 ACTCCCTCCGTTCCTAAATATCT 58.183 43.478 0.00 0.00 0.00 1.98
533 537 5.537674 TGTACTCCCTCCGTTCCTAAATATC 59.462 44.000 0.00 0.00 0.00 1.63
534 538 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
535 539 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
536 540 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
537 541 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
538 542 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
539 543 2.242965 TCATGTACTCCCTCCGTTCCTA 59.757 50.000 0.00 0.00 0.00 2.94
540 544 1.006758 TCATGTACTCCCTCCGTTCCT 59.993 52.381 0.00 0.00 0.00 3.36
541 545 1.136500 GTCATGTACTCCCTCCGTTCC 59.864 57.143 0.00 0.00 0.00 3.62
542 546 1.822990 TGTCATGTACTCCCTCCGTTC 59.177 52.381 0.00 0.00 0.00 3.95
543 547 1.933021 TGTCATGTACTCCCTCCGTT 58.067 50.000 0.00 0.00 0.00 4.44
544 548 1.933021 TTGTCATGTACTCCCTCCGT 58.067 50.000 0.00 0.00 0.00 4.69
545 549 2.028476 TGTTTGTCATGTACTCCCTCCG 60.028 50.000 0.00 0.00 0.00 4.63
546 550 3.695830 TGTTTGTCATGTACTCCCTCC 57.304 47.619 0.00 0.00 0.00 4.30
547 551 6.575162 AAAATGTTTGTCATGTACTCCCTC 57.425 37.500 0.00 0.00 36.81 4.30
548 552 6.748132 CAAAAATGTTTGTCATGTACTCCCT 58.252 36.000 0.00 0.00 39.49 4.20
580 584 9.914923 AAATCAAGCATTCGAAAAACTTTAAAC 57.085 25.926 0.00 0.00 0.00 2.01
766 771 2.038033 GCCTACATAAATAGACCGGCCA 59.962 50.000 0.00 0.00 0.00 5.36
843 887 1.410153 GATGTAAAAGGGCCTGGCATG 59.590 52.381 22.05 0.00 0.00 4.06
948 2628 3.739519 GCGCCTGACTATGTCTGAATCTT 60.740 47.826 0.00 0.00 34.21 2.40
1096 2776 0.817654 GTGGCTCCACAAAATAGGGC 59.182 55.000 13.81 0.00 45.53 5.19
1135 2815 4.500716 CCTGTAAAACCAAACCAAATCGCT 60.501 41.667 0.00 0.00 0.00 4.93
1150 2830 1.164411 CTCCACGCATGCCTGTAAAA 58.836 50.000 13.15 0.00 0.00 1.52
1343 3024 4.610333 ACTGGATTTAACCCTGGAATTCC 58.390 43.478 18.17 18.17 0.00 3.01
1427 3112 0.457035 TATCGGTAACCTGGCACGTC 59.543 55.000 0.00 0.00 0.00 4.34
1443 3128 8.703604 TGTTGCTCTCAGTAAACAATACTATC 57.296 34.615 0.00 0.00 0.00 2.08
1573 3285 7.042992 CGGAAGCACGATGACAAATACTTATAA 60.043 37.037 0.00 0.00 35.47 0.98
1576 3288 4.565166 CGGAAGCACGATGACAAATACTTA 59.435 41.667 0.00 0.00 35.47 2.24
1598 3310 3.990469 ACATCTGAGCAGACAAAGTAACG 59.010 43.478 1.71 0.00 40.75 3.18
1715 3427 3.251972 GGTTGCTTCAAGCTATAGGATGC 59.748 47.826 11.57 5.35 42.97 3.91
1989 3701 9.677567 GCATAAAAAGAAGACTCAAATAACACA 57.322 29.630 0.00 0.00 0.00 3.72
2012 3726 2.818432 CTGTTGAGAAGAAGCAAGGCAT 59.182 45.455 0.00 0.00 0.00 4.40
2141 3864 3.969117 TCATTTTGCTGAGACACACAC 57.031 42.857 0.00 0.00 0.00 3.82
2178 3901 5.869753 AATCTGAAGAAATGGTCGTTCTG 57.130 39.130 0.00 0.00 35.50 3.02
2186 3909 5.972107 ACACTGGAAATCTGAAGAAATGG 57.028 39.130 0.00 0.00 0.00 3.16
2260 3983 4.338400 GCCCTGGTTGGTAATCAGAAATAC 59.662 45.833 3.50 0.00 0.00 1.89
2508 4238 8.229253 TCATCAACCATGAAAATGAATAGGAG 57.771 34.615 0.00 0.00 38.68 3.69
2523 4253 2.498481 CCAAGCAACCATCATCAACCAT 59.502 45.455 0.00 0.00 0.00 3.55
2524 4254 1.894466 CCAAGCAACCATCATCAACCA 59.106 47.619 0.00 0.00 0.00 3.67
2525 4255 1.205417 CCCAAGCAACCATCATCAACC 59.795 52.381 0.00 0.00 0.00 3.77
2526 4256 1.895131 ACCCAAGCAACCATCATCAAC 59.105 47.619 0.00 0.00 0.00 3.18
2527 4257 1.894466 CACCCAAGCAACCATCATCAA 59.106 47.619 0.00 0.00 0.00 2.57
2528 4258 1.548081 CACCCAAGCAACCATCATCA 58.452 50.000 0.00 0.00 0.00 3.07
2529 4259 0.819582 CCACCCAAGCAACCATCATC 59.180 55.000 0.00 0.00 0.00 2.92
2530 4260 1.259840 GCCACCCAAGCAACCATCAT 61.260 55.000 0.00 0.00 0.00 2.45
2531 4261 1.907807 GCCACCCAAGCAACCATCA 60.908 57.895 0.00 0.00 0.00 3.07
2532 4262 1.187567 AAGCCACCCAAGCAACCATC 61.188 55.000 0.00 0.00 0.00 3.51
2625 4358 2.598632 GGCGTGACACAGAGTGCAC 61.599 63.158 9.40 9.40 36.98 4.57
2633 4366 0.529773 GTGACTGAAGGCGTGACACA 60.530 55.000 6.37 0.00 0.00 3.72
2637 4370 1.324383 TGTAGTGACTGAAGGCGTGA 58.676 50.000 0.00 0.00 0.00 4.35
2683 4416 5.846164 AGTAATATGAGGGATGTGGATGTGA 59.154 40.000 0.00 0.00 0.00 3.58
2741 4474 8.445275 TGCTTTCTACACTAAATCTGTTGAAA 57.555 30.769 7.57 7.57 39.47 2.69
2837 4570 8.954950 AGTATTATCAGACTTTGTCCTGATTG 57.045 34.615 9.72 0.00 34.70 2.67
2909 4642 0.326595 TAGGTGATCGCTTTTGGGCA 59.673 50.000 6.18 0.00 0.00 5.36
3026 4759 0.179000 CGCTACAATCCCCTTCAGCT 59.821 55.000 0.00 0.00 0.00 4.24
3163 4902 3.710326 TCAGTCCGTATGTAGTGCATC 57.290 47.619 0.00 0.00 38.94 3.91
3184 4923 2.912771 TGGTGTGTTCGTTCAGTCATT 58.087 42.857 0.00 0.00 0.00 2.57
3185 4924 2.613026 TGGTGTGTTCGTTCAGTCAT 57.387 45.000 0.00 0.00 0.00 3.06
3186 4925 2.209273 CATGGTGTGTTCGTTCAGTCA 58.791 47.619 0.00 0.00 0.00 3.41
3188 4927 1.939934 CACATGGTGTGTTCGTTCAGT 59.060 47.619 0.00 0.00 43.08 3.41
3189 4928 2.668617 CACATGGTGTGTTCGTTCAG 57.331 50.000 0.00 0.00 43.08 3.02
3249 4989 4.292306 AGGAATACCCCTTCTGTTCACAAT 59.708 41.667 0.00 0.00 36.73 2.71
3542 5284 6.820656 TGTTTGTTGAAGTGGCAAAACATAAT 59.179 30.769 7.17 0.00 34.47 1.28
3543 5285 6.166279 TGTTTGTTGAAGTGGCAAAACATAA 58.834 32.000 7.17 3.66 34.47 1.90
3591 5337 7.097834 TGCAAAAGCAATGATGTCATGATTTA 58.902 30.769 0.00 0.00 36.56 1.40
3741 5489 3.051581 AGAAGGCACCAGACCATATCAT 58.948 45.455 0.00 0.00 0.00 2.45
3742 5490 2.171237 CAGAAGGCACCAGACCATATCA 59.829 50.000 0.00 0.00 0.00 2.15
3744 5492 1.133976 GCAGAAGGCACCAGACCATAT 60.134 52.381 0.00 0.00 43.97 1.78
3748 5496 2.743928 CGCAGAAGGCACCAGACC 60.744 66.667 0.00 0.00 45.17 3.85
3761 5509 7.865707 AGCTTCTAAAATAATAATCACCGCAG 58.134 34.615 0.00 0.00 0.00 5.18
3778 5526 7.944729 AATAGAAGGCATTCAAAGCTTCTAA 57.055 32.000 14.34 0.00 37.94 2.10
3794 5542 8.186821 CCAACAAGCAAATAGAGAAATAGAAGG 58.813 37.037 0.00 0.00 0.00 3.46
3801 5549 6.321181 ACTGAACCAACAAGCAAATAGAGAAA 59.679 34.615 0.00 0.00 0.00 2.52
3824 5572 3.248888 ACAGGGGTTAAGCAAGTAGACT 58.751 45.455 7.03 0.00 0.00 3.24
3836 5584 2.008242 AGCATGCAAAACAGGGGTTA 57.992 45.000 21.98 0.00 35.82 2.85
3845 5593 8.710551 CAACATATTGTCTAAAAGCATGCAAAA 58.289 29.630 21.98 0.00 0.00 2.44
4025 5779 4.923893 TGAGCATTTCAGAATTTATGGCG 58.076 39.130 0.00 0.00 0.00 5.69
4153 5909 5.220359 CGATGAAGTGTAGATCTGCAAGTTG 60.220 44.000 15.57 0.00 33.76 3.16
4301 6057 3.366374 GGTTTTCCCATGAAAGAAGAGCG 60.366 47.826 0.00 0.00 41.31 5.03
4490 6254 1.945580 AGAAGAGGACCTTGGAGGAC 58.054 55.000 0.00 0.00 37.67 3.85
4576 6340 4.568152 AGACGTTTTTGCAAGCTACATT 57.432 36.364 0.00 0.00 0.00 2.71
4577 6341 4.568152 AAGACGTTTTTGCAAGCTACAT 57.432 36.364 0.00 0.00 0.00 2.29
4578 6342 5.682943 ATAAGACGTTTTTGCAAGCTACA 57.317 34.783 0.00 0.00 0.00 2.74
4579 6343 9.931210 ATAATATAAGACGTTTTTGCAAGCTAC 57.069 29.630 0.00 0.00 0.00 3.58
4581 6345 8.673711 TCATAATATAAGACGTTTTTGCAAGCT 58.326 29.630 0.00 0.00 0.00 3.74
4582 6346 8.835467 TCATAATATAAGACGTTTTTGCAAGC 57.165 30.769 0.00 0.00 0.00 4.01
4584 6348 9.982291 GTCTCATAATATAAGACGTTTTTGCAA 57.018 29.630 0.00 0.00 31.01 4.08
4653 6417 6.432936 ACGTTTTTGTAGGCTTAAGTTTAGC 58.567 36.000 5.29 5.29 37.91 3.09
4654 6418 7.858583 AGACGTTTTTGTAGGCTTAAGTTTAG 58.141 34.615 4.02 0.00 0.00 1.85
4655 6419 7.790823 AGACGTTTTTGTAGGCTTAAGTTTA 57.209 32.000 4.02 0.00 0.00 2.01
4656 6420 6.688637 AGACGTTTTTGTAGGCTTAAGTTT 57.311 33.333 4.02 0.00 0.00 2.66
4657 6421 6.688637 AAGACGTTTTTGTAGGCTTAAGTT 57.311 33.333 4.02 0.00 0.00 2.66
4658 6422 7.974482 ATAAGACGTTTTTGTAGGCTTAAGT 57.026 32.000 4.02 0.00 0.00 2.24
4662 6426 9.620660 CAAAATATAAGACGTTTTTGTAGGCTT 57.379 29.630 11.08 0.40 35.41 4.35
4663 6427 9.005777 TCAAAATATAAGACGTTTTTGTAGGCT 57.994 29.630 16.32 0.00 39.13 4.58
4664 6428 9.783256 ATCAAAATATAAGACGTTTTTGTAGGC 57.217 29.630 16.32 0.00 39.13 3.93
4668 6432 9.405587 CCACATCAAAATATAAGACGTTTTTGT 57.594 29.630 16.32 4.99 39.13 2.83
4669 6433 9.619316 TCCACATCAAAATATAAGACGTTTTTG 57.381 29.630 12.50 12.50 39.33 2.44
4670 6434 9.840427 CTCCACATCAAAATATAAGACGTTTTT 57.160 29.630 0.00 0.00 0.00 1.94
4671 6435 8.458843 CCTCCACATCAAAATATAAGACGTTTT 58.541 33.333 0.00 0.00 0.00 2.43
4672 6436 7.067008 CCCTCCACATCAAAATATAAGACGTTT 59.933 37.037 0.00 0.00 0.00 3.60
4673 6437 6.542370 CCCTCCACATCAAAATATAAGACGTT 59.458 38.462 0.00 0.00 0.00 3.99
4674 6438 6.055588 CCCTCCACATCAAAATATAAGACGT 58.944 40.000 0.00 0.00 0.00 4.34
4675 6439 6.288294 TCCCTCCACATCAAAATATAAGACG 58.712 40.000 0.00 0.00 0.00 4.18
4676 6440 7.283329 ACTCCCTCCACATCAAAATATAAGAC 58.717 38.462 0.00 0.00 0.00 3.01
4687 6451 7.567250 TCTTTAACATATACTCCCTCCACATCA 59.433 37.037 0.00 0.00 0.00 3.07
4688 6452 7.963532 TCTTTAACATATACTCCCTCCACATC 58.036 38.462 0.00 0.00 0.00 3.06
4689 6453 7.931015 TCTTTAACATATACTCCCTCCACAT 57.069 36.000 0.00 0.00 0.00 3.21
4691 6455 8.429641 TCAATCTTTAACATATACTCCCTCCAC 58.570 37.037 0.00 0.00 0.00 4.02
4692 6456 8.561536 TCAATCTTTAACATATACTCCCTCCA 57.438 34.615 0.00 0.00 0.00 3.86
4775 6539 2.415168 TGGCGCTTAATCGTTCTTTCAG 59.585 45.455 7.64 0.00 0.00 3.02
4792 6556 3.059868 CCGCTAGTTATTTGTATGTGGCG 60.060 47.826 0.00 0.00 38.84 5.69
4821 6585 4.924305 TCTTACCAGACAACTACACGTT 57.076 40.909 0.00 0.00 35.88 3.99
4832 6596 9.733219 GTGTAGTTCTAACATATCTTACCAGAC 57.267 37.037 0.00 0.00 0.00 3.51
4841 6605 9.680315 GATACAGGTGTGTAGTTCTAACATATC 57.320 37.037 0.00 0.00 42.53 1.63
4852 6616 5.077564 TGTCTTCAGATACAGGTGTGTAGT 58.922 41.667 0.00 0.00 42.53 2.73
4942 6706 6.736123 AGTATATGCACTAGAACCGTTACAG 58.264 40.000 0.00 0.00 0.00 2.74
5009 6774 0.937304 CGGAGGATATGCACCGTTTG 59.063 55.000 21.83 0.00 40.42 2.93
5053 6830 2.353011 GGATGGACATGCAAACCACTTG 60.353 50.000 11.09 0.00 36.49 3.16
5063 6840 2.633967 AGAGAGAGATGGATGGACATGC 59.366 50.000 0.00 0.00 0.00 4.06
5091 6868 2.171840 ACGACTACTTGTGGCATCTCT 58.828 47.619 0.00 0.00 0.00 3.10
5098 6875 5.710984 ACAAAGAGATACGACTACTTGTGG 58.289 41.667 0.00 0.00 0.00 4.17
5152 6929 1.560146 TGGGTATATTGGCCGTGTTCA 59.440 47.619 0.00 0.00 0.00 3.18
5178 6955 2.422597 CCGGTGCATGTCAACTTTCTA 58.577 47.619 0.00 0.00 0.00 2.10
5179 6956 1.238439 CCGGTGCATGTCAACTTTCT 58.762 50.000 0.00 0.00 0.00 2.52
5180 6957 0.387239 GCCGGTGCATGTCAACTTTC 60.387 55.000 1.90 0.00 37.47 2.62
5290 7067 6.745159 TCTGAGTGTTACAGACAGAGTATC 57.255 41.667 14.18 0.00 39.39 2.24
5303 7080 5.010719 AGTTTCTGGACGAATCTGAGTGTTA 59.989 40.000 0.00 0.00 31.98 2.41
5398 7176 1.993369 GCTAATCAACTGGCGCCACC 61.993 60.000 29.03 0.00 39.84 4.61
5463 7250 1.549203 AACCTGGCCATACAAAGCTG 58.451 50.000 5.51 0.00 0.00 4.24
5466 7253 4.522789 ACACTTTAACCTGGCCATACAAAG 59.477 41.667 5.51 15.61 0.00 2.77
5468 7255 4.107127 ACACTTTAACCTGGCCATACAA 57.893 40.909 5.51 0.00 0.00 2.41
5471 7258 5.444744 ACATACACTTTAACCTGGCCATA 57.555 39.130 5.51 0.00 0.00 2.74
5476 7263 3.823873 TGGCAACATACACTTTAACCTGG 59.176 43.478 0.00 0.00 46.17 4.45
5550 7338 3.186409 TCAAGATAAAACTGTGAGCACGC 59.814 43.478 0.00 0.00 0.00 5.34
5568 7356 5.163764 TGTTGTTGTAGAAGCACTTGTCAAG 60.164 40.000 11.17 11.17 0.00 3.02
5578 7366 3.691049 TGCTGTTGTTGTTGTAGAAGC 57.309 42.857 0.00 0.00 0.00 3.86
5581 7370 4.216042 CCATCATGCTGTTGTTGTTGTAGA 59.784 41.667 0.00 0.00 0.00 2.59
5595 7384 0.683179 ATGCACACAGCCATCATGCT 60.683 50.000 0.00 0.00 44.83 3.79
5596 7385 0.248907 GATGCACACAGCCATCATGC 60.249 55.000 0.00 0.00 44.83 4.06
5597 7386 1.099689 TGATGCACACAGCCATCATG 58.900 50.000 0.00 0.00 44.83 3.07
5598 7387 3.581163 TGATGCACACAGCCATCAT 57.419 47.368 0.00 0.00 44.83 2.45
5629 7418 3.700038 TCAAAAAGAAGTTAAACCCGGCA 59.300 39.130 0.00 0.00 0.00 5.69
5665 7456 6.127925 GGAGTAGCAAATGTTCATGTTCATGA 60.128 38.462 10.88 10.88 0.00 3.07
5695 7486 6.892310 ACAAACGTTCTTATATTACGGGAC 57.108 37.500 0.00 0.00 39.45 4.46
5696 7487 7.701924 CACTACAAACGTTCTTATATTACGGGA 59.298 37.037 0.00 0.00 39.45 5.14
5697 7488 7.489113 ACACTACAAACGTTCTTATATTACGGG 59.511 37.037 0.00 0.00 39.45 5.28
5698 7489 8.398491 ACACTACAAACGTTCTTATATTACGG 57.602 34.615 0.00 0.00 39.45 4.02
5699 7490 9.064804 TGACACTACAAACGTTCTTATATTACG 57.935 33.333 0.00 0.00 40.85 3.18
5704 7495 9.919348 GTTTTTGACACTACAAACGTTCTTATA 57.081 29.630 0.00 0.00 39.08 0.98
5705 7496 7.637132 CGTTTTTGACACTACAAACGTTCTTAT 59.363 33.333 0.00 0.00 39.08 1.73
5706 7497 6.954852 CGTTTTTGACACTACAAACGTTCTTA 59.045 34.615 0.00 0.00 39.08 2.10
5707 7498 5.791480 CGTTTTTGACACTACAAACGTTCTT 59.209 36.000 0.00 0.00 39.08 2.52
5708 7499 5.106987 ACGTTTTTGACACTACAAACGTTCT 60.107 36.000 14.14 0.00 41.27 3.01
5709 7500 5.081394 ACGTTTTTGACACTACAAACGTTC 58.919 37.500 14.14 0.00 41.27 3.95
5710 7501 5.033326 ACGTTTTTGACACTACAAACGTT 57.967 34.783 14.14 0.00 41.27 3.99
5711 7502 4.666928 ACGTTTTTGACACTACAAACGT 57.333 36.364 14.14 14.14 40.16 3.99
5712 7503 5.318349 AGAACGTTTTTGACACTACAAACG 58.682 37.500 0.46 12.98 39.08 3.60
5713 7504 8.831000 ATAAGAACGTTTTTGACACTACAAAC 57.169 30.769 13.87 0.00 39.08 2.93
5720 7511 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
5721 7512 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
5722 7513 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
5723 7514 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
5724 7515 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
5725 7516 7.553760 ACCGTCCCATAATATAAGAACGTTTTT 59.446 33.333 9.22 9.22 0.00 1.94
5726 7517 7.011669 CACCGTCCCATAATATAAGAACGTTTT 59.988 37.037 0.46 0.00 0.00 2.43
5727 7518 6.480981 CACCGTCCCATAATATAAGAACGTTT 59.519 38.462 0.46 0.00 0.00 3.60
5728 7519 5.987347 CACCGTCCCATAATATAAGAACGTT 59.013 40.000 0.00 0.00 0.00 3.99
5729 7520 5.510179 CCACCGTCCCATAATATAAGAACGT 60.510 44.000 0.00 0.00 0.00 3.99
5730 7521 4.927425 CCACCGTCCCATAATATAAGAACG 59.073 45.833 0.00 0.00 0.00 3.95
5731 7522 5.012354 TCCCACCGTCCCATAATATAAGAAC 59.988 44.000 0.00 0.00 0.00 3.01
5732 7523 5.156649 TCCCACCGTCCCATAATATAAGAA 58.843 41.667 0.00 0.00 0.00 2.52
5733 7524 4.754311 TCCCACCGTCCCATAATATAAGA 58.246 43.478 0.00 0.00 0.00 2.10
5734 7525 5.492855 TTCCCACCGTCCCATAATATAAG 57.507 43.478 0.00 0.00 0.00 1.73
5735 7526 6.731919 AGTATTCCCACCGTCCCATAATATAA 59.268 38.462 0.00 0.00 0.00 0.98
5736 7527 6.266080 AGTATTCCCACCGTCCCATAATATA 58.734 40.000 0.00 0.00 0.00 0.86
5737 7528 5.098663 AGTATTCCCACCGTCCCATAATAT 58.901 41.667 0.00 0.00 0.00 1.28
5738 7529 4.495565 AGTATTCCCACCGTCCCATAATA 58.504 43.478 0.00 0.00 0.00 0.98
5739 7530 3.323775 AGTATTCCCACCGTCCCATAAT 58.676 45.455 0.00 0.00 0.00 1.28
5740 7531 2.766736 AGTATTCCCACCGTCCCATAA 58.233 47.619 0.00 0.00 0.00 1.90
5741 7532 2.482414 AGTATTCCCACCGTCCCATA 57.518 50.000 0.00 0.00 0.00 2.74
5742 7533 1.591768 AAGTATTCCCACCGTCCCAT 58.408 50.000 0.00 0.00 0.00 4.00
5743 7534 1.364269 AAAGTATTCCCACCGTCCCA 58.636 50.000 0.00 0.00 0.00 4.37
5744 7535 2.236893 TGTAAAGTATTCCCACCGTCCC 59.763 50.000 0.00 0.00 0.00 4.46
5745 7536 3.615224 TGTAAAGTATTCCCACCGTCC 57.385 47.619 0.00 0.00 0.00 4.79
5760 7551 5.986135 ACGCCATTAATTTGTTGCTTGTAAA 59.014 32.000 0.00 0.00 0.00 2.01
5761 7552 5.533482 ACGCCATTAATTTGTTGCTTGTAA 58.467 33.333 0.00 0.00 0.00 2.41
5762 7553 5.127693 ACGCCATTAATTTGTTGCTTGTA 57.872 34.783 0.00 0.00 0.00 2.41
5763 7554 3.988819 ACGCCATTAATTTGTTGCTTGT 58.011 36.364 0.00 0.00 0.00 3.16
5764 7555 4.210955 ACAACGCCATTAATTTGTTGCTTG 59.789 37.500 17.66 10.09 42.68 4.01
5765 7556 4.376146 ACAACGCCATTAATTTGTTGCTT 58.624 34.783 17.66 4.07 42.68 3.91
5766 7557 3.988819 ACAACGCCATTAATTTGTTGCT 58.011 36.364 17.66 7.95 42.68 3.91
5767 7558 5.220378 CCATACAACGCCATTAATTTGTTGC 60.220 40.000 17.66 3.55 42.68 4.17
5768 7559 6.096036 TCCATACAACGCCATTAATTTGTTG 58.904 36.000 16.74 16.74 44.06 3.33
5769 7560 6.151985 TCTCCATACAACGCCATTAATTTGTT 59.848 34.615 8.19 0.90 34.15 2.83
5770 7561 5.650266 TCTCCATACAACGCCATTAATTTGT 59.350 36.000 8.03 8.03 36.23 2.83
5771 7562 6.130298 TCTCCATACAACGCCATTAATTTG 57.870 37.500 0.00 0.00 0.00 2.32
5772 7563 6.545666 TCATCTCCATACAACGCCATTAATTT 59.454 34.615 0.00 0.00 0.00 1.82
5773 7564 6.061441 TCATCTCCATACAACGCCATTAATT 58.939 36.000 0.00 0.00 0.00 1.40
5774 7565 5.620206 TCATCTCCATACAACGCCATTAAT 58.380 37.500 0.00 0.00 0.00 1.40
5775 7566 5.029807 TCATCTCCATACAACGCCATTAA 57.970 39.130 0.00 0.00 0.00 1.40
5776 7567 4.681074 TCATCTCCATACAACGCCATTA 57.319 40.909 0.00 0.00 0.00 1.90
5777 7568 3.558931 TCATCTCCATACAACGCCATT 57.441 42.857 0.00 0.00 0.00 3.16
5778 7569 3.558931 TTCATCTCCATACAACGCCAT 57.441 42.857 0.00 0.00 0.00 4.40
5779 7570 3.006940 GTTTCATCTCCATACAACGCCA 58.993 45.455 0.00 0.00 0.00 5.69
5780 7571 3.006940 TGTTTCATCTCCATACAACGCC 58.993 45.455 0.00 0.00 0.00 5.68
5781 7572 3.435327 TGTGTTTCATCTCCATACAACGC 59.565 43.478 0.00 0.00 0.00 4.84
5782 7573 5.801350 ATGTGTTTCATCTCCATACAACG 57.199 39.130 0.00 0.00 29.76 4.10
5783 7574 7.849804 AGTATGTGTTTCATCTCCATACAAC 57.150 36.000 9.86 0.00 40.03 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.