Multiple sequence alignment - TraesCS1D01G187500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G187500 chr1D 100.000 3371 0 0 1 3371 258977733 258981103 0.000000e+00 6226.0
1 TraesCS1D01G187500 chr1D 94.805 308 14 1 1 306 466966514 466966821 2.350000e-131 479.0
2 TraesCS1D01G187500 chr1D 87.931 290 18 6 1708 1981 11506074 11505786 3.240000e-85 326.0
3 TraesCS1D01G187500 chr1A 92.233 2691 103 43 306 2921 341874481 341871822 0.000000e+00 3714.0
4 TraesCS1D01G187500 chr1A 88.421 380 19 5 2994 3371 341871815 341871459 5.170000e-118 435.0
5 TraesCS1D01G187500 chr1A 82.716 81 10 4 2923 3001 581268436 581268514 6.040000e-08 69.4
6 TraesCS1D01G187500 chr1B 94.682 1335 48 13 1617 2929 353946952 353945619 0.000000e+00 2050.0
7 TraesCS1D01G187500 chr1B 91.420 1317 40 20 306 1565 353948351 353947051 0.000000e+00 1738.0
8 TraesCS1D01G187500 chr1B 93.421 380 23 2 2994 3371 353945623 353945244 2.270000e-156 562.0
9 TraesCS1D01G187500 chr1B 87.276 503 45 4 1261 1762 77720289 77720773 1.060000e-154 556.0
10 TraesCS1D01G187500 chr1B 87.449 247 27 3 1321 1565 124074480 124074236 7.120000e-72 281.0
11 TraesCS1D01G187500 chr3B 85.085 590 68 7 1261 1849 104584828 104584258 4.850000e-163 584.0
12 TraesCS1D01G187500 chr3B 96.154 52 1 1 2954 3005 65214097 65214147 2.160000e-12 84.2
13 TraesCS1D01G187500 chr3B 83.721 86 12 2 2918 3001 677724655 677724740 2.790000e-11 80.5
14 TraesCS1D01G187500 chr2A 93.506 308 18 1 1 306 669506215 669505908 1.100000e-124 457.0
15 TraesCS1D01G187500 chr2A 89.199 287 13 10 1708 1978 605512757 605513041 3.220000e-90 342.0
16 TraesCS1D01G187500 chr2A 96.078 51 2 0 2954 3004 572054258 572054208 2.160000e-12 84.2
17 TraesCS1D01G187500 chr6D 92.208 308 21 2 1 306 55410905 55411211 1.860000e-117 433.0
18 TraesCS1D01G187500 chr2D 90.196 306 25 2 1 304 13144571 13144269 8.770000e-106 394.0
19 TraesCS1D01G187500 chr2D 88.372 301 33 1 3 301 563762023 563762323 8.890000e-96 361.0
20 TraesCS1D01G187500 chr3A 89.286 308 31 1 1 306 719587787 719588094 5.280000e-103 385.0
21 TraesCS1D01G187500 chr7D 89.384 292 29 1 3 292 14407684 14407975 1.910000e-97 366.0
22 TraesCS1D01G187500 chr7D 87.622 307 36 1 2 306 576062869 576062563 4.140000e-94 355.0
23 TraesCS1D01G187500 chr7D 89.796 98 9 1 1254 1350 592034581 592034678 1.270000e-24 124.0
24 TraesCS1D01G187500 chr7D 97.917 48 1 0 2954 3001 168580906 168580859 2.160000e-12 84.2
25 TraesCS1D01G187500 chr7D 97.917 48 1 0 2954 3001 423587149 423587102 2.160000e-12 84.2
26 TraesCS1D01G187500 chrUn 87.829 304 35 1 3 304 81316274 81315971 4.140000e-94 355.0
27 TraesCS1D01G187500 chr5D 88.811 286 16 5 1711 1981 532474284 532474000 1.500000e-88 337.0
28 TraesCS1D01G187500 chr5D 85.000 260 20 6 1449 1708 532475102 532474862 2.600000e-61 246.0
29 TraesCS1D01G187500 chr5D 89.796 98 9 1 1254 1350 92290828 92290925 1.270000e-24 124.0
30 TraesCS1D01G187500 chr4A 88.850 287 15 6 1708 1978 187594245 187594530 1.500000e-88 337.0
31 TraesCS1D01G187500 chr4A 89.069 247 25 2 1321 1565 493269967 493269721 4.230000e-79 305.0
32 TraesCS1D01G187500 chr4A 89.344 244 23 3 1321 1562 738692920 738693162 1.520000e-78 303.0
33 TraesCS1D01G187500 chr2B 88.850 287 15 9 1708 1978 737995248 737995533 1.500000e-88 337.0
34 TraesCS1D01G187500 chr2B 88.502 287 16 6 1708 1978 12311922 12312207 6.970000e-87 331.0
35 TraesCS1D01G187500 chr2B 87.456 287 19 9 1708 1978 295697927 295698212 7.020000e-82 315.0
36 TraesCS1D01G187500 chr2B 90.667 75 4 3 2927 2999 676586455 676586528 2.770000e-16 97.1
37 TraesCS1D01G187500 chr7B 88.276 290 17 6 1708 1981 71219442 71219154 6.970000e-87 331.0
38 TraesCS1D01G187500 chr7B 87.063 286 21 8 1711 1981 413036744 413036460 3.270000e-80 309.0
39 TraesCS1D01G187500 chr7B 94.444 54 2 1 2954 3007 138750042 138750094 7.750000e-12 82.4
40 TraesCS1D01G187500 chr7A 88.276 290 17 8 1708 1981 682818980 682818692 6.970000e-87 331.0
41 TraesCS1D01G187500 chr7A 86.916 107 11 3 1254 1357 626867058 626867164 2.130000e-22 117.0
42 TraesCS1D01G187500 chr5A 88.276 290 17 10 1708 1981 342329534 342329246 6.970000e-87 331.0
43 TraesCS1D01G187500 chr5A 89.474 247 24 2 1321 1565 671854365 671854611 9.080000e-81 311.0
44 TraesCS1D01G187500 chr5A 80.224 268 43 8 1911 2173 685996368 685996106 3.430000e-45 193.0
45 TraesCS1D01G187500 chr5A 85.981 107 12 3 1254 1357 562124159 562124053 9.890000e-21 111.0
46 TraesCS1D01G187500 chr5A 96.078 51 2 0 2957 3007 578056703 578056653 2.160000e-12 84.2
47 TraesCS1D01G187500 chr5B 87.931 290 18 9 1708 1981 295931657 295931369 3.240000e-85 326.0
48 TraesCS1D01G187500 chr5B 88.785 107 12 0 1262 1368 163656197 163656091 7.590000e-27 132.0
49 TraesCS1D01G187500 chr6A 87.241 290 20 6 1708 1981 96081933 96081645 7.020000e-82 315.0
50 TraesCS1D01G187500 chr6A 94.845 97 5 0 1185 1281 585206274 585206370 5.830000e-33 152.0
51 TraesCS1D01G187500 chr4B 89.256 242 25 1 1325 1565 564752613 564752372 5.470000e-78 302.0
52 TraesCS1D01G187500 chr4B 82.759 174 28 2 1652 1824 646974948 646974776 1.620000e-33 154.0
53 TraesCS1D01G187500 chr4D 86.538 260 16 5 1449 1708 505944919 505945159 5.540000e-68 268.0
54 TraesCS1D01G187500 chr4D 81.356 177 31 2 1649 1824 502578536 502578361 3.510000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G187500 chr1D 258977733 258981103 3370 False 6226.0 6226 100.000000 1 3371 1 chr1D.!!$F1 3370
1 TraesCS1D01G187500 chr1A 341871459 341874481 3022 True 2074.5 3714 90.327000 306 3371 2 chr1A.!!$R1 3065
2 TraesCS1D01G187500 chr1B 353945244 353948351 3107 True 1450.0 2050 93.174333 306 3371 3 chr1B.!!$R2 3065
3 TraesCS1D01G187500 chr3B 104584258 104584828 570 True 584.0 584 85.085000 1261 1849 1 chr3B.!!$R1 588
4 TraesCS1D01G187500 chr5D 532474000 532475102 1102 True 291.5 337 86.905500 1449 1981 2 chr5D.!!$R1 532

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
94 95 0.114364 TCCTTTTGAGCCCTTTCCCC 59.886 55.0 0.0 0.0 0.00 4.81 F
516 521 0.174845 TCGGGGCAAGTGATAACTCG 59.825 55.0 0.0 0.0 0.00 4.18 F
645 653 0.463620 CTAGCTCAGCCAGAAGGGTC 59.536 60.0 0.0 0.0 45.83 4.46 F
2176 2900 0.665369 CGTCGTCGGGTAAGCAAAGT 60.665 55.0 0.0 0.0 0.00 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1573 1639 0.036294 GTCAGTTCCGGGGAAGAAGG 60.036 60.0 0.0 0.0 34.49 3.46 R
1574 1640 0.685097 TGTCAGTTCCGGGGAAGAAG 59.315 55.0 0.0 0.0 34.49 2.85 R
2198 2927 0.714180 TCCAGAGCCCACCTAACCTA 59.286 55.0 0.0 0.0 0.00 3.08 R
3223 3983 1.714794 CGAACCTTCTCAAGCACGAT 58.285 50.0 0.0 0.0 0.00 3.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.708563 TTGTTAACAGCTTTCACCAGC 57.291 42.857 8.56 0.00 40.44 4.85
22 23 2.649190 TGTTAACAGCTTTCACCAGCA 58.351 42.857 3.59 0.00 42.84 4.41
23 24 3.221771 TGTTAACAGCTTTCACCAGCAT 58.778 40.909 3.59 0.00 42.84 3.79
24 25 4.393834 TGTTAACAGCTTTCACCAGCATA 58.606 39.130 3.59 0.00 42.84 3.14
25 26 4.215399 TGTTAACAGCTTTCACCAGCATAC 59.785 41.667 3.59 0.00 42.84 2.39
26 27 1.442769 ACAGCTTTCACCAGCATACG 58.557 50.000 0.00 0.00 42.84 3.06
27 28 1.001974 ACAGCTTTCACCAGCATACGA 59.998 47.619 0.00 0.00 42.84 3.43
28 29 1.662629 CAGCTTTCACCAGCATACGAG 59.337 52.381 0.00 0.00 42.84 4.18
29 30 1.550524 AGCTTTCACCAGCATACGAGA 59.449 47.619 0.00 0.00 42.84 4.04
30 31 1.929836 GCTTTCACCAGCATACGAGAG 59.070 52.381 0.00 0.00 39.83 3.20
31 32 2.417379 GCTTTCACCAGCATACGAGAGA 60.417 50.000 0.00 0.00 39.83 3.10
32 33 3.849911 CTTTCACCAGCATACGAGAGAA 58.150 45.455 0.00 0.00 0.00 2.87
33 34 2.941453 TCACCAGCATACGAGAGAAC 57.059 50.000 0.00 0.00 0.00 3.01
34 35 2.167662 TCACCAGCATACGAGAGAACA 58.832 47.619 0.00 0.00 0.00 3.18
35 36 2.094700 TCACCAGCATACGAGAGAACAC 60.095 50.000 0.00 0.00 0.00 3.32
36 37 1.135373 ACCAGCATACGAGAGAACACG 60.135 52.381 0.00 0.00 36.30 4.49
37 38 1.135373 CCAGCATACGAGAGAACACGT 60.135 52.381 0.00 0.00 44.35 4.49
38 39 2.177977 CAGCATACGAGAGAACACGTC 58.822 52.381 0.00 0.00 41.70 4.34
39 40 1.810755 AGCATACGAGAGAACACGTCA 59.189 47.619 0.00 0.00 41.70 4.35
40 41 2.159503 AGCATACGAGAGAACACGTCAG 60.160 50.000 0.00 0.00 41.70 3.51
41 42 2.177977 CATACGAGAGAACACGTCAGC 58.822 52.381 0.00 0.00 41.70 4.26
42 43 1.520494 TACGAGAGAACACGTCAGCT 58.480 50.000 0.00 0.00 41.70 4.24
43 44 1.520494 ACGAGAGAACACGTCAGCTA 58.480 50.000 0.00 0.00 38.80 3.32
44 45 1.197264 ACGAGAGAACACGTCAGCTAC 59.803 52.381 0.00 0.00 38.80 3.58
45 46 1.466024 CGAGAGAACACGTCAGCTACC 60.466 57.143 0.00 0.00 0.00 3.18
46 47 1.540267 GAGAGAACACGTCAGCTACCA 59.460 52.381 0.00 0.00 0.00 3.25
47 48 1.961394 AGAGAACACGTCAGCTACCAA 59.039 47.619 0.00 0.00 0.00 3.67
48 49 2.364324 AGAGAACACGTCAGCTACCAAA 59.636 45.455 0.00 0.00 0.00 3.28
49 50 3.006967 AGAGAACACGTCAGCTACCAAAT 59.993 43.478 0.00 0.00 0.00 2.32
50 51 3.740115 AGAACACGTCAGCTACCAAATT 58.260 40.909 0.00 0.00 0.00 1.82
51 52 4.890088 AGAACACGTCAGCTACCAAATTA 58.110 39.130 0.00 0.00 0.00 1.40
52 53 5.302360 AGAACACGTCAGCTACCAAATTAA 58.698 37.500 0.00 0.00 0.00 1.40
53 54 5.761234 AGAACACGTCAGCTACCAAATTAAA 59.239 36.000 0.00 0.00 0.00 1.52
54 55 5.352643 ACACGTCAGCTACCAAATTAAAC 57.647 39.130 0.00 0.00 0.00 2.01
55 56 4.817464 ACACGTCAGCTACCAAATTAAACA 59.183 37.500 0.00 0.00 0.00 2.83
56 57 5.049680 ACACGTCAGCTACCAAATTAAACAG 60.050 40.000 0.00 0.00 0.00 3.16
57 58 4.083484 ACGTCAGCTACCAAATTAAACAGC 60.083 41.667 0.00 0.00 0.00 4.40
58 59 4.083537 CGTCAGCTACCAAATTAAACAGCA 60.084 41.667 0.00 0.00 0.00 4.41
59 60 5.391950 CGTCAGCTACCAAATTAAACAGCAT 60.392 40.000 0.00 0.00 0.00 3.79
60 61 6.389906 GTCAGCTACCAAATTAAACAGCATT 58.610 36.000 0.00 0.00 0.00 3.56
61 62 6.308766 GTCAGCTACCAAATTAAACAGCATTG 59.691 38.462 0.00 0.00 0.00 2.82
62 63 5.577945 CAGCTACCAAATTAAACAGCATTGG 59.422 40.000 0.00 0.00 44.75 3.16
67 68 4.389687 CCAAATTAAACAGCATTGGTGAGC 59.610 41.667 21.85 0.00 36.60 4.26
68 69 5.232463 CAAATTAAACAGCATTGGTGAGCT 58.768 37.500 21.85 8.25 42.94 4.09
69 70 4.708726 ATTAAACAGCATTGGTGAGCTC 57.291 40.909 21.85 6.82 39.50 4.09
70 71 0.877071 AAACAGCATTGGTGAGCTCG 59.123 50.000 21.85 0.00 39.50 5.03
71 72 0.957395 AACAGCATTGGTGAGCTCGG 60.957 55.000 21.85 0.00 39.50 4.63
72 73 2.110967 CAGCATTGGTGAGCTCGGG 61.111 63.158 10.30 0.00 39.50 5.14
73 74 2.045926 GCATTGGTGAGCTCGGGT 60.046 61.111 9.64 0.00 0.00 5.28
74 75 2.109126 GCATTGGTGAGCTCGGGTC 61.109 63.158 9.64 0.00 0.00 4.46
75 76 1.599047 CATTGGTGAGCTCGGGTCT 59.401 57.895 9.64 0.00 0.00 3.85
76 77 0.460987 CATTGGTGAGCTCGGGTCTC 60.461 60.000 9.64 0.39 0.00 3.36
77 78 1.617947 ATTGGTGAGCTCGGGTCTCC 61.618 60.000 9.64 13.73 41.99 3.71
78 79 2.363147 GGTGAGCTCGGGTCTCCT 60.363 66.667 9.64 0.00 39.60 3.69
79 80 1.985116 GGTGAGCTCGGGTCTCCTT 60.985 63.158 9.64 0.00 39.60 3.36
80 81 1.545706 GGTGAGCTCGGGTCTCCTTT 61.546 60.000 9.64 0.00 39.60 3.11
81 82 0.321996 GTGAGCTCGGGTCTCCTTTT 59.678 55.000 9.64 0.00 0.00 2.27
82 83 0.321671 TGAGCTCGGGTCTCCTTTTG 59.678 55.000 9.64 0.00 0.00 2.44
83 84 0.608640 GAGCTCGGGTCTCCTTTTGA 59.391 55.000 0.00 0.00 0.00 2.69
84 85 0.610687 AGCTCGGGTCTCCTTTTGAG 59.389 55.000 0.00 0.00 42.90 3.02
85 86 1.021920 GCTCGGGTCTCCTTTTGAGC 61.022 60.000 0.00 0.00 41.18 4.26
86 87 0.391793 CTCGGGTCTCCTTTTGAGCC 60.392 60.000 0.00 0.00 45.56 4.70
87 88 1.377333 CGGGTCTCCTTTTGAGCCC 60.377 63.158 6.42 10.04 46.09 5.19
88 89 1.842381 CGGGTCTCCTTTTGAGCCCT 61.842 60.000 15.11 0.00 46.75 5.19
89 90 0.405973 GGGTCTCCTTTTGAGCCCTT 59.594 55.000 11.87 0.00 46.07 3.95
90 91 1.203063 GGGTCTCCTTTTGAGCCCTTT 60.203 52.381 11.87 0.00 46.07 3.11
91 92 2.163509 GGTCTCCTTTTGAGCCCTTTC 58.836 52.381 0.00 0.00 36.16 2.62
92 93 2.163509 GTCTCCTTTTGAGCCCTTTCC 58.836 52.381 0.00 0.00 41.18 3.13
93 94 1.075536 TCTCCTTTTGAGCCCTTTCCC 59.924 52.381 0.00 0.00 41.18 3.97
94 95 0.114364 TCCTTTTGAGCCCTTTCCCC 59.886 55.000 0.00 0.00 0.00 4.81
95 96 0.904865 CCTTTTGAGCCCTTTCCCCC 60.905 60.000 0.00 0.00 0.00 5.40
114 115 3.840124 CCCTACAAAGTAAGGGCCTAG 57.160 52.381 6.41 0.00 45.91 3.02
115 116 3.381335 CCCTACAAAGTAAGGGCCTAGA 58.619 50.000 6.41 0.00 45.91 2.43
116 117 3.778629 CCCTACAAAGTAAGGGCCTAGAA 59.221 47.826 6.41 0.00 45.91 2.10
117 118 4.383880 CCCTACAAAGTAAGGGCCTAGAAC 60.384 50.000 6.41 5.93 45.91 3.01
118 119 4.224370 CCTACAAAGTAAGGGCCTAGAACA 59.776 45.833 6.41 0.00 0.00 3.18
119 120 4.929146 ACAAAGTAAGGGCCTAGAACAT 57.071 40.909 6.41 0.00 0.00 2.71
120 121 4.844884 ACAAAGTAAGGGCCTAGAACATC 58.155 43.478 6.41 0.00 0.00 3.06
121 122 4.288626 ACAAAGTAAGGGCCTAGAACATCA 59.711 41.667 6.41 0.00 0.00 3.07
122 123 5.044846 ACAAAGTAAGGGCCTAGAACATCAT 60.045 40.000 6.41 0.00 0.00 2.45
123 124 5.717119 AAGTAAGGGCCTAGAACATCATT 57.283 39.130 6.41 0.00 0.00 2.57
124 125 6.824958 AAGTAAGGGCCTAGAACATCATTA 57.175 37.500 6.41 0.00 0.00 1.90
125 126 6.824958 AGTAAGGGCCTAGAACATCATTAA 57.175 37.500 6.41 0.00 0.00 1.40
126 127 7.394144 AGTAAGGGCCTAGAACATCATTAAT 57.606 36.000 6.41 0.00 0.00 1.40
127 128 7.454225 AGTAAGGGCCTAGAACATCATTAATC 58.546 38.462 6.41 0.00 0.00 1.75
128 129 6.521527 AAGGGCCTAGAACATCATTAATCT 57.478 37.500 6.41 0.00 0.00 2.40
129 130 6.521527 AGGGCCTAGAACATCATTAATCTT 57.478 37.500 2.82 0.00 0.00 2.40
130 131 6.302269 AGGGCCTAGAACATCATTAATCTTG 58.698 40.000 2.82 0.00 0.00 3.02
131 132 6.101734 AGGGCCTAGAACATCATTAATCTTGA 59.898 38.462 2.82 0.00 0.00 3.02
132 133 6.205658 GGGCCTAGAACATCATTAATCTTGAC 59.794 42.308 0.84 0.00 0.00 3.18
133 134 6.767902 GGCCTAGAACATCATTAATCTTGACA 59.232 38.462 0.00 0.00 0.00 3.58
134 135 7.254932 GGCCTAGAACATCATTAATCTTGACAC 60.255 40.741 0.00 0.00 0.00 3.67
135 136 7.280876 GCCTAGAACATCATTAATCTTGACACA 59.719 37.037 0.00 0.00 0.00 3.72
136 137 8.824781 CCTAGAACATCATTAATCTTGACACAG 58.175 37.037 0.00 0.00 0.00 3.66
137 138 9.591792 CTAGAACATCATTAATCTTGACACAGA 57.408 33.333 2.02 0.00 0.00 3.41
138 139 8.853077 AGAACATCATTAATCTTGACACAGAA 57.147 30.769 2.02 0.00 0.00 3.02
139 140 9.288576 AGAACATCATTAATCTTGACACAGAAA 57.711 29.630 2.02 0.00 0.00 2.52
140 141 9.897744 GAACATCATTAATCTTGACACAGAAAA 57.102 29.630 2.02 0.00 0.00 2.29
142 143 9.903682 ACATCATTAATCTTGACACAGAAAAAG 57.096 29.630 2.02 0.00 0.00 2.27
143 144 8.857216 CATCATTAATCTTGACACAGAAAAAGC 58.143 33.333 0.00 0.00 0.00 3.51
144 145 8.169977 TCATTAATCTTGACACAGAAAAAGCT 57.830 30.769 0.00 0.00 0.00 3.74
145 146 8.632679 TCATTAATCTTGACACAGAAAAAGCTT 58.367 29.630 0.00 0.00 0.00 3.74
146 147 9.252962 CATTAATCTTGACACAGAAAAAGCTTT 57.747 29.630 5.69 5.69 0.00 3.51
147 148 8.633075 TTAATCTTGACACAGAAAAAGCTTTG 57.367 30.769 13.54 3.08 0.00 2.77
148 149 5.643379 TCTTGACACAGAAAAAGCTTTGT 57.357 34.783 13.54 7.12 31.90 2.83
149 150 6.024552 TCTTGACACAGAAAAAGCTTTGTT 57.975 33.333 13.54 9.20 29.56 2.83
150 151 5.863397 TCTTGACACAGAAAAAGCTTTGTTG 59.137 36.000 13.54 13.40 29.56 3.33
151 152 3.925913 TGACACAGAAAAAGCTTTGTTGC 59.074 39.130 13.54 0.00 29.56 4.17
152 153 3.924144 ACACAGAAAAAGCTTTGTTGCA 58.076 36.364 13.54 0.00 34.99 4.08
153 154 4.314121 ACACAGAAAAAGCTTTGTTGCAA 58.686 34.783 13.54 0.00 34.99 4.08
154 155 4.754114 ACACAGAAAAAGCTTTGTTGCAAA 59.246 33.333 13.54 0.00 34.99 3.68
155 156 5.238214 ACACAGAAAAAGCTTTGTTGCAAAA 59.762 32.000 13.54 0.00 34.99 2.44
156 157 6.072563 ACACAGAAAAAGCTTTGTTGCAAAAT 60.073 30.769 13.54 0.00 34.99 1.82
157 158 6.249682 CACAGAAAAAGCTTTGTTGCAAAATG 59.750 34.615 13.54 4.73 34.99 2.32
158 159 5.740099 CAGAAAAAGCTTTGTTGCAAAATGG 59.260 36.000 13.54 0.00 34.99 3.16
159 160 5.647225 AGAAAAAGCTTTGTTGCAAAATGGA 59.353 32.000 13.54 0.00 34.99 3.41
160 161 5.488645 AAAAGCTTTGTTGCAAAATGGAG 57.511 34.783 13.54 0.00 34.99 3.86
161 162 4.405116 AAGCTTTGTTGCAAAATGGAGA 57.595 36.364 0.00 0.00 34.99 3.71
162 163 3.986277 AGCTTTGTTGCAAAATGGAGAG 58.014 40.909 0.00 0.00 34.99 3.20
163 164 3.062042 GCTTTGTTGCAAAATGGAGAGG 58.938 45.455 0.00 0.00 0.00 3.69
164 165 3.493176 GCTTTGTTGCAAAATGGAGAGGT 60.493 43.478 0.00 0.00 0.00 3.85
165 166 4.696455 CTTTGTTGCAAAATGGAGAGGTT 58.304 39.130 0.00 0.00 0.00 3.50
166 167 4.320608 TTGTTGCAAAATGGAGAGGTTC 57.679 40.909 0.00 0.00 0.00 3.62
167 168 2.627699 TGTTGCAAAATGGAGAGGTTCC 59.372 45.455 0.00 0.00 46.98 3.62
175 176 3.762674 GGAGAGGTTCCACCGAATC 57.237 57.895 0.00 0.00 44.90 2.52
176 177 0.178301 GGAGAGGTTCCACCGAATCC 59.822 60.000 0.00 0.00 44.90 3.01
177 178 0.902531 GAGAGGTTCCACCGAATCCA 59.097 55.000 0.00 0.00 44.90 3.41
178 179 0.613777 AGAGGTTCCACCGAATCCAC 59.386 55.000 0.00 0.00 44.90 4.02
179 180 0.613777 GAGGTTCCACCGAATCCACT 59.386 55.000 0.00 0.00 44.90 4.00
180 181 1.003233 GAGGTTCCACCGAATCCACTT 59.997 52.381 0.00 0.00 44.90 3.16
181 182 2.235402 GAGGTTCCACCGAATCCACTTA 59.765 50.000 0.00 0.00 44.90 2.24
182 183 2.236395 AGGTTCCACCGAATCCACTTAG 59.764 50.000 0.00 0.00 44.90 2.18
183 184 2.007608 GTTCCACCGAATCCACTTAGC 58.992 52.381 0.00 0.00 0.00 3.09
184 185 1.568504 TCCACCGAATCCACTTAGCT 58.431 50.000 0.00 0.00 0.00 3.32
185 186 1.480954 TCCACCGAATCCACTTAGCTC 59.519 52.381 0.00 0.00 0.00 4.09
186 187 1.473434 CCACCGAATCCACTTAGCTCC 60.473 57.143 0.00 0.00 0.00 4.70
187 188 1.207089 CACCGAATCCACTTAGCTCCA 59.793 52.381 0.00 0.00 0.00 3.86
188 189 1.906574 ACCGAATCCACTTAGCTCCAA 59.093 47.619 0.00 0.00 0.00 3.53
189 190 2.304761 ACCGAATCCACTTAGCTCCAAA 59.695 45.455 0.00 0.00 0.00 3.28
190 191 3.244770 ACCGAATCCACTTAGCTCCAAAA 60.245 43.478 0.00 0.00 0.00 2.44
191 192 3.127030 CCGAATCCACTTAGCTCCAAAAC 59.873 47.826 0.00 0.00 0.00 2.43
192 193 3.127030 CGAATCCACTTAGCTCCAAAACC 59.873 47.826 0.00 0.00 0.00 3.27
193 194 2.579410 TCCACTTAGCTCCAAAACCC 57.421 50.000 0.00 0.00 0.00 4.11
194 195 1.074889 TCCACTTAGCTCCAAAACCCC 59.925 52.381 0.00 0.00 0.00 4.95
195 196 1.075536 CCACTTAGCTCCAAAACCCCT 59.924 52.381 0.00 0.00 0.00 4.79
196 197 2.307686 CCACTTAGCTCCAAAACCCCTA 59.692 50.000 0.00 0.00 0.00 3.53
197 198 3.610911 CACTTAGCTCCAAAACCCCTAG 58.389 50.000 0.00 0.00 0.00 3.02
198 199 3.263425 CACTTAGCTCCAAAACCCCTAGA 59.737 47.826 0.00 0.00 0.00 2.43
199 200 3.914435 ACTTAGCTCCAAAACCCCTAGAA 59.086 43.478 0.00 0.00 0.00 2.10
200 201 4.019231 ACTTAGCTCCAAAACCCCTAGAAG 60.019 45.833 0.00 0.00 0.00 2.85
201 202 2.349445 AGCTCCAAAACCCCTAGAAGT 58.651 47.619 0.00 0.00 0.00 3.01
202 203 2.716969 AGCTCCAAAACCCCTAGAAGTT 59.283 45.455 0.00 0.00 0.00 2.66
203 204 3.914435 AGCTCCAAAACCCCTAGAAGTTA 59.086 43.478 0.00 0.00 0.00 2.24
204 205 4.019231 AGCTCCAAAACCCCTAGAAGTTAG 60.019 45.833 0.00 0.00 0.00 2.34
205 206 4.262617 CTCCAAAACCCCTAGAAGTTAGC 58.737 47.826 0.00 0.00 0.00 3.09
206 207 3.653836 TCCAAAACCCCTAGAAGTTAGCA 59.346 43.478 0.00 0.00 0.00 3.49
207 208 4.291249 TCCAAAACCCCTAGAAGTTAGCAT 59.709 41.667 0.00 0.00 0.00 3.79
208 209 4.640647 CCAAAACCCCTAGAAGTTAGCATC 59.359 45.833 0.00 0.00 0.00 3.91
209 210 5.501156 CAAAACCCCTAGAAGTTAGCATCT 58.499 41.667 0.00 0.00 0.00 2.90
210 211 5.360649 AAACCCCTAGAAGTTAGCATCTC 57.639 43.478 0.00 0.00 0.00 2.75
211 212 4.273300 ACCCCTAGAAGTTAGCATCTCT 57.727 45.455 0.00 0.00 0.00 3.10
212 213 5.405063 ACCCCTAGAAGTTAGCATCTCTA 57.595 43.478 0.00 0.00 0.00 2.43
213 214 5.141910 ACCCCTAGAAGTTAGCATCTCTAC 58.858 45.833 0.00 0.00 0.00 2.59
214 215 5.103430 ACCCCTAGAAGTTAGCATCTCTACT 60.103 44.000 0.00 0.00 0.00 2.57
215 216 6.102910 ACCCCTAGAAGTTAGCATCTCTACTA 59.897 42.308 0.00 0.00 0.00 1.82
216 217 6.657541 CCCCTAGAAGTTAGCATCTCTACTAG 59.342 46.154 0.00 0.00 0.00 2.57
217 218 7.455058 CCCTAGAAGTTAGCATCTCTACTAGA 58.545 42.308 0.00 0.00 39.02 2.43
218 219 7.940137 CCCTAGAAGTTAGCATCTCTACTAGAA 59.060 40.741 0.00 0.00 37.89 2.10
219 220 9.344772 CCTAGAAGTTAGCATCTCTACTAGAAA 57.655 37.037 0.00 0.00 37.89 2.52
223 224 9.471084 GAAGTTAGCATCTCTACTAGAAAATCC 57.529 37.037 0.00 0.00 37.89 3.01
224 225 7.958088 AGTTAGCATCTCTACTAGAAAATCCC 58.042 38.462 0.00 0.00 37.89 3.85
225 226 7.565398 AGTTAGCATCTCTACTAGAAAATCCCA 59.435 37.037 0.00 0.00 37.89 4.37
226 227 6.418057 AGCATCTCTACTAGAAAATCCCAG 57.582 41.667 0.00 0.00 37.89 4.45
227 228 5.902431 AGCATCTCTACTAGAAAATCCCAGT 59.098 40.000 0.00 0.00 37.89 4.00
228 229 6.385467 AGCATCTCTACTAGAAAATCCCAGTT 59.615 38.462 0.00 0.00 37.89 3.16
229 230 7.051000 GCATCTCTACTAGAAAATCCCAGTTT 58.949 38.462 0.00 0.00 37.89 2.66
230 231 8.204836 GCATCTCTACTAGAAAATCCCAGTTTA 58.795 37.037 0.00 0.00 37.89 2.01
231 232 9.535878 CATCTCTACTAGAAAATCCCAGTTTAC 57.464 37.037 0.00 0.00 37.89 2.01
232 233 8.660295 TCTCTACTAGAAAATCCCAGTTTACA 57.340 34.615 0.00 0.00 0.00 2.41
233 234 8.529476 TCTCTACTAGAAAATCCCAGTTTACAC 58.471 37.037 0.00 0.00 0.00 2.90
234 235 7.318141 TCTACTAGAAAATCCCAGTTTACACG 58.682 38.462 0.00 0.00 0.00 4.49
235 236 6.105397 ACTAGAAAATCCCAGTTTACACGA 57.895 37.500 0.00 0.00 0.00 4.35
236 237 6.708285 ACTAGAAAATCCCAGTTTACACGAT 58.292 36.000 0.00 0.00 0.00 3.73
237 238 6.817140 ACTAGAAAATCCCAGTTTACACGATC 59.183 38.462 0.00 0.00 0.00 3.69
238 239 4.630069 AGAAAATCCCAGTTTACACGATCG 59.370 41.667 14.88 14.88 0.00 3.69
239 240 3.604875 AATCCCAGTTTACACGATCGT 57.395 42.857 16.60 16.60 0.00 3.73
240 241 4.724074 AATCCCAGTTTACACGATCGTA 57.276 40.909 22.26 2.95 0.00 3.43
241 242 3.770263 TCCCAGTTTACACGATCGTAG 57.230 47.619 22.26 17.10 0.00 3.51
242 243 2.424601 TCCCAGTTTACACGATCGTAGG 59.575 50.000 22.26 12.39 0.00 3.18
243 244 2.190981 CCAGTTTACACGATCGTAGGC 58.809 52.381 22.26 9.60 0.00 3.93
244 245 2.159282 CCAGTTTACACGATCGTAGGCT 60.159 50.000 22.26 11.69 0.00 4.58
245 246 3.508762 CAGTTTACACGATCGTAGGCTT 58.491 45.455 22.26 5.64 0.00 4.35
246 247 3.924686 CAGTTTACACGATCGTAGGCTTT 59.075 43.478 22.26 3.01 0.00 3.51
247 248 4.031426 CAGTTTACACGATCGTAGGCTTTC 59.969 45.833 22.26 8.45 0.00 2.62
248 249 4.082354 AGTTTACACGATCGTAGGCTTTCT 60.082 41.667 22.26 10.51 0.00 2.52
249 250 2.563471 ACACGATCGTAGGCTTTCTC 57.437 50.000 22.26 0.00 0.00 2.87
250 251 1.816835 ACACGATCGTAGGCTTTCTCA 59.183 47.619 22.26 0.00 0.00 3.27
251 252 2.427453 ACACGATCGTAGGCTTTCTCAT 59.573 45.455 22.26 0.00 0.00 2.90
252 253 3.630769 ACACGATCGTAGGCTTTCTCATA 59.369 43.478 22.26 0.00 0.00 2.15
253 254 4.097437 ACACGATCGTAGGCTTTCTCATAA 59.903 41.667 22.26 0.00 0.00 1.90
254 255 5.221263 ACACGATCGTAGGCTTTCTCATAAT 60.221 40.000 22.26 0.00 0.00 1.28
255 256 5.343593 CACGATCGTAGGCTTTCTCATAATC 59.656 44.000 22.26 0.00 0.00 1.75
256 257 5.241949 ACGATCGTAGGCTTTCTCATAATCT 59.758 40.000 21.32 0.00 0.00 2.40
257 258 6.430308 ACGATCGTAGGCTTTCTCATAATCTA 59.570 38.462 21.32 0.00 0.00 1.98
258 259 7.040617 ACGATCGTAGGCTTTCTCATAATCTAA 60.041 37.037 21.32 0.00 0.00 2.10
259 260 7.271653 CGATCGTAGGCTTTCTCATAATCTAAC 59.728 40.741 7.03 0.00 0.00 2.34
260 261 7.584122 TCGTAGGCTTTCTCATAATCTAACT 57.416 36.000 0.00 0.00 0.00 2.24
261 262 8.008513 TCGTAGGCTTTCTCATAATCTAACTT 57.991 34.615 0.00 0.00 0.00 2.66
262 263 7.921214 TCGTAGGCTTTCTCATAATCTAACTTG 59.079 37.037 0.00 0.00 0.00 3.16
263 264 7.921214 CGTAGGCTTTCTCATAATCTAACTTGA 59.079 37.037 0.00 0.00 0.00 3.02
264 265 9.255304 GTAGGCTTTCTCATAATCTAACTTGAG 57.745 37.037 0.00 0.00 37.52 3.02
265 266 6.765512 AGGCTTTCTCATAATCTAACTTGAGC 59.234 38.462 0.00 0.00 36.41 4.26
266 267 6.540189 GGCTTTCTCATAATCTAACTTGAGCA 59.460 38.462 0.00 0.00 36.41 4.26
267 268 7.405769 GCTTTCTCATAATCTAACTTGAGCAC 58.594 38.462 0.00 0.00 36.41 4.40
268 269 7.065085 GCTTTCTCATAATCTAACTTGAGCACA 59.935 37.037 0.00 0.00 36.41 4.57
269 270 8.846943 TTTCTCATAATCTAACTTGAGCACAA 57.153 30.769 0.00 0.00 36.41 3.33
270 271 9.453572 TTTCTCATAATCTAACTTGAGCACAAT 57.546 29.630 0.00 0.00 36.41 2.71
271 272 9.453572 TTCTCATAATCTAACTTGAGCACAATT 57.546 29.630 0.00 0.00 36.41 2.32
272 273 9.102757 TCTCATAATCTAACTTGAGCACAATTC 57.897 33.333 0.00 0.00 36.41 2.17
273 274 8.213518 TCATAATCTAACTTGAGCACAATTCC 57.786 34.615 0.00 0.00 35.37 3.01
274 275 7.828717 TCATAATCTAACTTGAGCACAATTCCA 59.171 33.333 0.00 0.00 35.37 3.53
275 276 6.506500 AATCTAACTTGAGCACAATTCCAG 57.493 37.500 0.00 0.00 35.37 3.86
276 277 4.326826 TCTAACTTGAGCACAATTCCAGG 58.673 43.478 0.00 0.00 35.37 4.45
277 278 1.251251 ACTTGAGCACAATTCCAGGC 58.749 50.000 0.00 0.00 35.37 4.85
278 279 1.202976 ACTTGAGCACAATTCCAGGCT 60.203 47.619 0.00 0.00 39.75 4.58
280 281 2.486796 GAGCACAATTCCAGGCTCC 58.513 57.895 0.00 0.00 45.31 4.70
281 282 1.000396 AGCACAATTCCAGGCTCCC 60.000 57.895 0.00 0.00 28.71 4.30
282 283 1.000396 GCACAATTCCAGGCTCCCT 60.000 57.895 0.00 0.00 0.00 4.20
283 284 1.034292 GCACAATTCCAGGCTCCCTC 61.034 60.000 0.00 0.00 0.00 4.30
284 285 0.745845 CACAATTCCAGGCTCCCTCG 60.746 60.000 0.00 0.00 0.00 4.63
285 286 0.909610 ACAATTCCAGGCTCCCTCGA 60.910 55.000 0.00 0.00 0.00 4.04
286 287 0.471617 CAATTCCAGGCTCCCTCGAT 59.528 55.000 0.00 0.00 0.00 3.59
287 288 1.133976 CAATTCCAGGCTCCCTCGATT 60.134 52.381 0.00 0.00 0.00 3.34
288 289 1.216990 ATTCCAGGCTCCCTCGATTT 58.783 50.000 0.00 0.00 0.00 2.17
289 290 0.253044 TTCCAGGCTCCCTCGATTTG 59.747 55.000 0.00 0.00 0.00 2.32
290 291 0.909610 TCCAGGCTCCCTCGATTTGT 60.910 55.000 0.00 0.00 0.00 2.83
291 292 0.745845 CCAGGCTCCCTCGATTTGTG 60.746 60.000 0.00 0.00 0.00 3.33
292 293 1.078143 AGGCTCCCTCGATTTGTGC 60.078 57.895 0.00 0.00 0.00 4.57
293 294 1.377202 GGCTCCCTCGATTTGTGCA 60.377 57.895 0.00 0.00 0.00 4.57
294 295 0.960364 GGCTCCCTCGATTTGTGCAA 60.960 55.000 0.00 0.00 0.00 4.08
295 296 1.098050 GCTCCCTCGATTTGTGCAAT 58.902 50.000 0.00 0.00 0.00 3.56
296 297 1.474077 GCTCCCTCGATTTGTGCAATT 59.526 47.619 0.00 0.00 0.00 2.32
297 298 2.478539 GCTCCCTCGATTTGTGCAATTC 60.479 50.000 0.00 0.00 0.00 2.17
298 299 2.749076 CTCCCTCGATTTGTGCAATTCA 59.251 45.455 0.00 0.00 0.00 2.57
299 300 3.355378 TCCCTCGATTTGTGCAATTCAT 58.645 40.909 0.00 0.00 0.00 2.57
300 301 3.129113 TCCCTCGATTTGTGCAATTCATG 59.871 43.478 0.00 0.00 0.00 3.07
301 302 3.119388 CCCTCGATTTGTGCAATTCATGT 60.119 43.478 0.00 0.00 0.00 3.21
302 303 4.096231 CCCTCGATTTGTGCAATTCATGTA 59.904 41.667 0.00 0.00 0.00 2.29
303 304 5.221106 CCCTCGATTTGTGCAATTCATGTAT 60.221 40.000 0.00 0.00 0.00 2.29
304 305 6.017192 CCCTCGATTTGTGCAATTCATGTATA 60.017 38.462 0.00 0.00 0.00 1.47
350 351 1.144708 TGTGATGGTTGCAGGGAGAAA 59.855 47.619 0.00 0.00 0.00 2.52
516 521 0.174845 TCGGGGCAAGTGATAACTCG 59.825 55.000 0.00 0.00 0.00 4.18
581 586 4.944372 CGTATGCCCGACGCCTCC 62.944 72.222 0.00 0.00 36.24 4.30
645 653 0.463620 CTAGCTCAGCCAGAAGGGTC 59.536 60.000 0.00 0.00 45.83 4.46
660 668 0.735287 GGGTCGCCGTTTACTGTCTC 60.735 60.000 0.00 0.00 0.00 3.36
662 670 0.735287 GTCGCCGTTTACTGTCTCCC 60.735 60.000 0.00 0.00 0.00 4.30
903 929 1.606601 GCCTCCCACCTTTTCCACC 60.607 63.158 0.00 0.00 0.00 4.61
1499 1565 4.681978 GGCGTCGTCCACCTGCTT 62.682 66.667 0.00 0.00 0.00 3.91
1603 1669 3.435026 CCCGGAACTGACATTCCCATTAT 60.435 47.826 0.73 0.00 44.72 1.28
1604 1670 4.207165 CCGGAACTGACATTCCCATTATT 58.793 43.478 0.00 0.00 44.72 1.40
1605 1671 5.373222 CCGGAACTGACATTCCCATTATTA 58.627 41.667 0.00 0.00 44.72 0.98
1606 1672 5.238650 CCGGAACTGACATTCCCATTATTAC 59.761 44.000 0.00 0.00 44.72 1.89
1607 1673 5.238650 CGGAACTGACATTCCCATTATTACC 59.761 44.000 9.64 0.00 44.72 2.85
1608 1674 6.365520 GGAACTGACATTCCCATTATTACCT 58.634 40.000 5.72 0.00 42.16 3.08
1609 1675 6.263168 GGAACTGACATTCCCATTATTACCTG 59.737 42.308 5.72 0.00 42.16 4.00
1611 1677 6.969043 ACTGACATTCCCATTATTACCTGAA 58.031 36.000 0.00 0.00 0.00 3.02
1612 1678 7.410174 ACTGACATTCCCATTATTACCTGAAA 58.590 34.615 0.00 0.00 0.00 2.69
1613 1679 7.893302 ACTGACATTCCCATTATTACCTGAAAA 59.107 33.333 0.00 0.00 0.00 2.29
1614 1680 8.657387 TGACATTCCCATTATTACCTGAAAAA 57.343 30.769 0.00 0.00 0.00 1.94
1893 2617 2.543031 CGAGTTTCTGACACTTCCGACA 60.543 50.000 0.00 0.00 0.00 4.35
2176 2900 0.665369 CGTCGTCGGGTAAGCAAAGT 60.665 55.000 0.00 0.00 0.00 2.66
2182 2906 0.887933 CGGGTAAGCAAAGTGGCAAT 59.112 50.000 0.00 0.00 35.83 3.56
2188 2912 3.756933 AAGCAAAGTGGCAATGACATT 57.243 38.095 0.00 0.00 35.83 2.71
2189 2913 3.034721 AGCAAAGTGGCAATGACATTG 57.965 42.857 21.56 21.56 43.06 2.82
2201 2930 4.406069 CAATGACATTGCGTGAGTTTAGG 58.594 43.478 14.96 0.00 32.92 2.69
2343 3072 2.997315 TACCTCAGCTGCGTGCCT 60.997 61.111 9.47 0.00 44.23 4.75
2533 3267 5.105310 TCGGTTGTTTGATTTGAAAAAGGGA 60.105 36.000 0.00 0.00 0.00 4.20
2566 3300 0.035152 CTTCCACCTGCATGTGCCTA 60.035 55.000 15.87 1.88 41.18 3.93
2678 3416 3.319122 AGATTCCACAAAGCCAAGACAAC 59.681 43.478 0.00 0.00 0.00 3.32
2712 3450 6.293845 GGTGCAGATTATAGAAATGGCTTCAG 60.294 42.308 0.00 0.00 36.40 3.02
2723 3461 4.591321 AATGGCTTCAGGTAGGAAATGA 57.409 40.909 0.00 0.00 0.00 2.57
2728 3466 6.672593 TGGCTTCAGGTAGGAAATGATTTAT 58.327 36.000 0.00 0.00 0.00 1.40
2755 3496 2.542907 CCGCACCGAAAGCAAGTGT 61.543 57.895 0.00 0.00 33.96 3.55
2778 3519 9.206870 GTGTTAATGAATGATTTCACAACCAAT 57.793 29.630 10.24 0.00 44.36 3.16
2782 3534 8.487313 AATGAATGATTTCACAACCAATGATG 57.513 30.769 0.00 0.00 44.36 3.07
2783 3535 7.229581 TGAATGATTTCACAACCAATGATGA 57.770 32.000 0.00 0.00 36.94 2.92
2806 3561 3.134623 TCGGCATTCCAGTCAGAACATAT 59.865 43.478 0.00 0.00 0.00 1.78
2869 3624 6.506147 TGTAGTAGACTGTTAAAAGCGACAA 58.494 36.000 0.00 0.00 0.00 3.18
2924 3682 4.580868 TCCAAAATGAATGCCAGTACGTA 58.419 39.130 0.00 0.00 0.00 3.57
2925 3683 4.634004 TCCAAAATGAATGCCAGTACGTAG 59.366 41.667 0.00 0.00 0.00 3.51
2927 3685 5.583061 CCAAAATGAATGCCAGTACGTAGTA 59.417 40.000 1.81 0.00 45.11 1.82
2943 3701 6.655078 ACGTAGTACTTCCTCCTTAAACAA 57.345 37.500 0.00 0.00 41.94 2.83
2944 3702 7.054491 ACGTAGTACTTCCTCCTTAAACAAA 57.946 36.000 0.00 0.00 41.94 2.83
2945 3703 7.674120 ACGTAGTACTTCCTCCTTAAACAAAT 58.326 34.615 0.00 0.00 41.94 2.32
2946 3704 8.806146 ACGTAGTACTTCCTCCTTAAACAAATA 58.194 33.333 0.00 0.00 41.94 1.40
2947 3705 9.813446 CGTAGTACTTCCTCCTTAAACAAATAT 57.187 33.333 0.00 0.00 0.00 1.28
2950 3708 9.892130 AGTACTTCCTCCTTAAACAAATATGAG 57.108 33.333 0.00 0.00 0.00 2.90
2951 3709 9.668497 GTACTTCCTCCTTAAACAAATATGAGT 57.332 33.333 0.00 0.00 0.00 3.41
2952 3710 8.567285 ACTTCCTCCTTAAACAAATATGAGTG 57.433 34.615 0.00 0.00 0.00 3.51
2953 3711 7.121315 ACTTCCTCCTTAAACAAATATGAGTGC 59.879 37.037 0.00 0.00 0.00 4.40
2954 3712 6.721318 TCCTCCTTAAACAAATATGAGTGCT 58.279 36.000 0.00 0.00 0.00 4.40
2955 3713 7.175104 TCCTCCTTAAACAAATATGAGTGCTT 58.825 34.615 0.00 0.00 0.00 3.91
2956 3714 7.669722 TCCTCCTTAAACAAATATGAGTGCTTT 59.330 33.333 0.00 0.00 0.00 3.51
2957 3715 8.956426 CCTCCTTAAACAAATATGAGTGCTTTA 58.044 33.333 0.00 0.00 0.00 1.85
2958 3716 9.994432 CTCCTTAAACAAATATGAGTGCTTTAG 57.006 33.333 0.00 0.00 0.00 1.85
2959 3717 9.515226 TCCTTAAACAAATATGAGTGCTTTAGT 57.485 29.630 0.00 0.00 0.00 2.24
2960 3718 9.559958 CCTTAAACAAATATGAGTGCTTTAGTG 57.440 33.333 0.00 0.00 0.00 2.74
2964 3722 8.798859 AACAAATATGAGTGCTTTAGTGATCT 57.201 30.769 0.00 0.00 0.00 2.75
2965 3723 9.890629 AACAAATATGAGTGCTTTAGTGATCTA 57.109 29.630 0.00 0.00 0.00 1.98
2966 3724 9.890629 ACAAATATGAGTGCTTTAGTGATCTAA 57.109 29.630 0.00 0.00 34.76 2.10
2969 3727 6.893958 ATGAGTGCTTTAGTGATCTAAACG 57.106 37.500 0.00 0.00 40.05 3.60
2970 3728 4.625742 TGAGTGCTTTAGTGATCTAAACGC 59.374 41.667 0.00 0.00 40.05 4.84
2971 3729 4.822026 AGTGCTTTAGTGATCTAAACGCT 58.178 39.130 15.47 12.22 40.05 5.07
2972 3730 5.962433 AGTGCTTTAGTGATCTAAACGCTA 58.038 37.500 15.47 0.00 40.05 4.26
2973 3731 6.574350 AGTGCTTTAGTGATCTAAACGCTAT 58.426 36.000 15.47 7.74 40.05 2.97
2974 3732 7.042335 AGTGCTTTAGTGATCTAAACGCTATT 58.958 34.615 15.47 0.00 40.05 1.73
2975 3733 8.195436 AGTGCTTTAGTGATCTAAACGCTATTA 58.805 33.333 15.47 0.00 40.05 0.98
2976 3734 8.979574 GTGCTTTAGTGATCTAAACGCTATTAT 58.020 33.333 15.47 0.00 40.05 1.28
2991 3749 8.530269 AACGCTATTATATTTCTTTACGGAGG 57.470 34.615 0.00 0.00 0.00 4.30
2992 3750 7.095270 ACGCTATTATATTTCTTTACGGAGGG 58.905 38.462 0.00 0.00 0.00 4.30
3030 3788 0.675083 TGGTCTCCGCAAAAGACGTA 59.325 50.000 0.00 0.00 43.33 3.57
3056 3814 9.289782 ACATGGCAGGAGTTATATTATCTTTTC 57.710 33.333 5.99 0.00 0.00 2.29
3063 3821 8.421784 AGGAGTTATATTATCTTTTCGTGCTCA 58.578 33.333 0.00 0.00 0.00 4.26
3116 3874 7.575155 GCTTGAATATGGAAGATCATGACATGG 60.575 40.741 15.37 0.00 0.00 3.66
3169 3928 0.252479 CTCTCAATGCACCTCTGGCT 59.748 55.000 0.00 0.00 0.00 4.75
3178 3937 0.250295 CACCTCTGGCTCGAACCAAA 60.250 55.000 9.21 0.00 39.86 3.28
3311 4071 0.317269 CAGTGCACGCTGGAAAGTTG 60.317 55.000 12.01 0.00 33.11 3.16
3331 4091 1.595929 GTTCCTTTGGTCGGCGTGA 60.596 57.895 6.85 0.00 0.00 4.35
3340 4100 2.429571 TCGGCGTGACTTGCGTAC 60.430 61.111 6.85 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.636300 TGCTGGTGAAAGCTGTTAACAAT 59.364 39.130 10.03 0.00 43.90 2.71
2 3 2.649190 TGCTGGTGAAAGCTGTTAACA 58.351 42.857 8.28 8.28 43.90 2.41
4 5 3.435327 CGTATGCTGGTGAAAGCTGTTAA 59.565 43.478 0.00 0.00 43.90 2.01
5 6 3.000041 CGTATGCTGGTGAAAGCTGTTA 59.000 45.455 0.00 0.00 43.90 2.41
6 7 1.806542 CGTATGCTGGTGAAAGCTGTT 59.193 47.619 0.00 0.00 43.90 3.16
7 8 1.001974 TCGTATGCTGGTGAAAGCTGT 59.998 47.619 0.00 0.00 43.90 4.40
8 9 1.662629 CTCGTATGCTGGTGAAAGCTG 59.337 52.381 0.00 0.00 43.90 4.24
9 10 1.550524 TCTCGTATGCTGGTGAAAGCT 59.449 47.619 0.00 0.00 43.90 3.74
10 11 1.929836 CTCTCGTATGCTGGTGAAAGC 59.070 52.381 0.00 0.00 43.82 3.51
11 12 3.510388 TCTCTCGTATGCTGGTGAAAG 57.490 47.619 0.00 0.00 0.00 2.62
12 13 3.006430 TGTTCTCTCGTATGCTGGTGAAA 59.994 43.478 0.00 0.00 0.00 2.69
13 14 2.560981 TGTTCTCTCGTATGCTGGTGAA 59.439 45.455 0.00 0.00 0.00 3.18
14 15 2.094700 GTGTTCTCTCGTATGCTGGTGA 60.095 50.000 0.00 0.00 0.00 4.02
15 16 2.263077 GTGTTCTCTCGTATGCTGGTG 58.737 52.381 0.00 0.00 0.00 4.17
16 17 1.135373 CGTGTTCTCTCGTATGCTGGT 60.135 52.381 0.00 0.00 0.00 4.00
17 18 1.135373 ACGTGTTCTCTCGTATGCTGG 60.135 52.381 0.00 0.00 41.01 4.85
18 19 2.177977 GACGTGTTCTCTCGTATGCTG 58.822 52.381 0.00 0.00 42.45 4.41
19 20 1.810755 TGACGTGTTCTCTCGTATGCT 59.189 47.619 0.00 0.00 42.45 3.79
20 21 2.177977 CTGACGTGTTCTCTCGTATGC 58.822 52.381 0.00 0.00 42.45 3.14
21 22 2.159503 AGCTGACGTGTTCTCTCGTATG 60.160 50.000 0.00 0.00 42.45 2.39
22 23 2.085320 AGCTGACGTGTTCTCTCGTAT 58.915 47.619 0.00 0.00 42.45 3.06
23 24 1.520494 AGCTGACGTGTTCTCTCGTA 58.480 50.000 0.00 0.00 42.45 3.43
24 25 1.197264 GTAGCTGACGTGTTCTCTCGT 59.803 52.381 0.00 0.00 44.51 4.18
25 26 1.466024 GGTAGCTGACGTGTTCTCTCG 60.466 57.143 0.00 0.00 36.75 4.04
26 27 1.540267 TGGTAGCTGACGTGTTCTCTC 59.460 52.381 0.00 0.00 0.00 3.20
27 28 1.617322 TGGTAGCTGACGTGTTCTCT 58.383 50.000 0.00 0.00 0.00 3.10
28 29 2.433868 TTGGTAGCTGACGTGTTCTC 57.566 50.000 0.00 0.00 0.00 2.87
29 30 2.902705 TTTGGTAGCTGACGTGTTCT 57.097 45.000 0.00 0.00 0.00 3.01
30 31 5.600908 TTAATTTGGTAGCTGACGTGTTC 57.399 39.130 0.00 0.00 0.00 3.18
31 32 5.297278 TGTTTAATTTGGTAGCTGACGTGTT 59.703 36.000 0.00 0.00 0.00 3.32
32 33 4.817464 TGTTTAATTTGGTAGCTGACGTGT 59.183 37.500 0.00 0.00 0.00 4.49
33 34 5.351233 TGTTTAATTTGGTAGCTGACGTG 57.649 39.130 0.00 0.00 0.00 4.49
34 35 4.083484 GCTGTTTAATTTGGTAGCTGACGT 60.083 41.667 0.00 0.00 0.00 4.34
35 36 4.083537 TGCTGTTTAATTTGGTAGCTGACG 60.084 41.667 0.00 0.00 32.66 4.35
36 37 5.371115 TGCTGTTTAATTTGGTAGCTGAC 57.629 39.130 0.00 0.00 32.66 3.51
37 38 6.389091 CAATGCTGTTTAATTTGGTAGCTGA 58.611 36.000 0.00 0.00 32.66 4.26
38 39 5.577945 CCAATGCTGTTTAATTTGGTAGCTG 59.422 40.000 0.00 0.00 33.67 4.24
39 40 5.245977 ACCAATGCTGTTTAATTTGGTAGCT 59.754 36.000 3.93 0.00 46.12 3.32
40 41 5.348451 CACCAATGCTGTTTAATTTGGTAGC 59.652 40.000 5.40 0.00 46.21 3.58
41 42 6.686630 TCACCAATGCTGTTTAATTTGGTAG 58.313 36.000 5.40 2.03 46.21 3.18
42 43 6.656632 TCACCAATGCTGTTTAATTTGGTA 57.343 33.333 5.40 0.00 46.21 3.25
44 45 4.389687 GCTCACCAATGCTGTTTAATTTGG 59.610 41.667 0.00 0.00 42.02 3.28
45 46 5.232463 AGCTCACCAATGCTGTTTAATTTG 58.768 37.500 0.00 0.00 38.21 2.32
46 47 5.473039 GAGCTCACCAATGCTGTTTAATTT 58.527 37.500 9.40 0.00 39.91 1.82
47 48 4.379813 CGAGCTCACCAATGCTGTTTAATT 60.380 41.667 15.40 0.00 39.91 1.40
48 49 3.127548 CGAGCTCACCAATGCTGTTTAAT 59.872 43.478 15.40 0.00 39.91 1.40
49 50 2.483877 CGAGCTCACCAATGCTGTTTAA 59.516 45.455 15.40 0.00 39.91 1.52
50 51 2.076100 CGAGCTCACCAATGCTGTTTA 58.924 47.619 15.40 0.00 39.91 2.01
51 52 0.877071 CGAGCTCACCAATGCTGTTT 59.123 50.000 15.40 0.00 39.91 2.83
52 53 0.957395 CCGAGCTCACCAATGCTGTT 60.957 55.000 15.40 0.00 39.91 3.16
53 54 1.376424 CCGAGCTCACCAATGCTGT 60.376 57.895 15.40 0.00 39.91 4.40
54 55 2.110967 CCCGAGCTCACCAATGCTG 61.111 63.158 15.40 0.00 39.91 4.41
55 56 2.270205 CCCGAGCTCACCAATGCT 59.730 61.111 15.40 0.00 42.82 3.79
56 57 2.045926 ACCCGAGCTCACCAATGC 60.046 61.111 15.40 0.00 0.00 3.56
57 58 0.460987 GAGACCCGAGCTCACCAATG 60.461 60.000 15.40 0.00 32.67 2.82
58 59 1.617947 GGAGACCCGAGCTCACCAAT 61.618 60.000 15.40 0.00 34.07 3.16
59 60 2.283529 GGAGACCCGAGCTCACCAA 61.284 63.158 15.40 0.00 34.07 3.67
60 61 2.680352 GGAGACCCGAGCTCACCA 60.680 66.667 15.40 0.00 34.07 4.17
61 62 1.545706 AAAGGAGACCCGAGCTCACC 61.546 60.000 15.40 6.73 37.58 4.02
62 63 0.321996 AAAAGGAGACCCGAGCTCAC 59.678 55.000 15.40 1.88 37.58 3.51
63 64 0.321671 CAAAAGGAGACCCGAGCTCA 59.678 55.000 15.40 0.00 37.58 4.26
64 65 0.608640 TCAAAAGGAGACCCGAGCTC 59.391 55.000 2.73 2.73 37.58 4.09
65 66 2.759985 TCAAAAGGAGACCCGAGCT 58.240 52.632 0.00 0.00 37.58 4.09
67 68 0.391793 GGCTCAAAAGGAGACCCGAG 60.392 60.000 0.00 0.00 46.80 4.63
68 69 1.677552 GGCTCAAAAGGAGACCCGA 59.322 57.895 0.00 0.00 46.80 5.14
69 70 4.303257 GGCTCAAAAGGAGACCCG 57.697 61.111 0.00 0.00 46.80 5.28
74 75 1.550327 GGGAAAGGGCTCAAAAGGAG 58.450 55.000 0.00 0.00 46.93 3.69
75 76 0.114364 GGGGAAAGGGCTCAAAAGGA 59.886 55.000 0.00 0.00 0.00 3.36
76 77 0.904865 GGGGGAAAGGGCTCAAAAGG 60.905 60.000 0.00 0.00 0.00 3.11
77 78 2.671145 GGGGGAAAGGGCTCAAAAG 58.329 57.895 0.00 0.00 0.00 2.27
78 79 4.966247 GGGGGAAAGGGCTCAAAA 57.034 55.556 0.00 0.00 0.00 2.44
95 96 4.224370 TGTTCTAGGCCCTTACTTTGTAGG 59.776 45.833 0.00 0.00 0.00 3.18
96 97 5.416271 TGTTCTAGGCCCTTACTTTGTAG 57.584 43.478 0.00 0.00 0.00 2.74
97 98 5.486063 TGATGTTCTAGGCCCTTACTTTGTA 59.514 40.000 0.00 0.00 0.00 2.41
98 99 4.288626 TGATGTTCTAGGCCCTTACTTTGT 59.711 41.667 0.00 0.00 0.00 2.83
99 100 4.843728 TGATGTTCTAGGCCCTTACTTTG 58.156 43.478 0.00 0.00 0.00 2.77
100 101 5.717119 ATGATGTTCTAGGCCCTTACTTT 57.283 39.130 0.00 0.00 0.00 2.66
101 102 5.717119 AATGATGTTCTAGGCCCTTACTT 57.283 39.130 0.00 0.00 0.00 2.24
102 103 6.824958 TTAATGATGTTCTAGGCCCTTACT 57.175 37.500 0.00 0.00 0.00 2.24
103 104 7.454225 AGATTAATGATGTTCTAGGCCCTTAC 58.546 38.462 0.00 0.00 0.00 2.34
104 105 7.633018 AGATTAATGATGTTCTAGGCCCTTA 57.367 36.000 0.00 0.00 0.00 2.69
105 106 6.521527 AGATTAATGATGTTCTAGGCCCTT 57.478 37.500 0.00 0.00 0.00 3.95
106 107 6.101734 TCAAGATTAATGATGTTCTAGGCCCT 59.898 38.462 0.00 0.00 0.00 5.19
107 108 6.205658 GTCAAGATTAATGATGTTCTAGGCCC 59.794 42.308 0.00 0.00 0.00 5.80
108 109 6.767902 TGTCAAGATTAATGATGTTCTAGGCC 59.232 38.462 0.00 0.00 0.00 5.19
109 110 7.280876 TGTGTCAAGATTAATGATGTTCTAGGC 59.719 37.037 0.00 0.00 0.00 3.93
110 111 8.722480 TGTGTCAAGATTAATGATGTTCTAGG 57.278 34.615 0.00 0.00 0.00 3.02
111 112 9.591792 TCTGTGTCAAGATTAATGATGTTCTAG 57.408 33.333 0.00 0.00 0.00 2.43
112 113 9.942850 TTCTGTGTCAAGATTAATGATGTTCTA 57.057 29.630 0.00 0.00 0.00 2.10
113 114 8.853077 TTCTGTGTCAAGATTAATGATGTTCT 57.147 30.769 0.00 0.00 0.00 3.01
114 115 9.897744 TTTTCTGTGTCAAGATTAATGATGTTC 57.102 29.630 0.00 0.00 0.00 3.18
116 117 9.903682 CTTTTTCTGTGTCAAGATTAATGATGT 57.096 29.630 0.00 0.00 0.00 3.06
117 118 8.857216 GCTTTTTCTGTGTCAAGATTAATGATG 58.143 33.333 0.00 0.00 0.00 3.07
118 119 8.800332 AGCTTTTTCTGTGTCAAGATTAATGAT 58.200 29.630 0.00 0.00 0.00 2.45
119 120 8.169977 AGCTTTTTCTGTGTCAAGATTAATGA 57.830 30.769 0.00 0.00 0.00 2.57
120 121 8.807667 AAGCTTTTTCTGTGTCAAGATTAATG 57.192 30.769 0.00 0.00 0.00 1.90
121 122 9.252962 CAAAGCTTTTTCTGTGTCAAGATTAAT 57.747 29.630 9.53 0.00 0.00 1.40
122 123 8.250332 ACAAAGCTTTTTCTGTGTCAAGATTAA 58.750 29.630 9.53 0.00 28.67 1.40
123 124 7.771183 ACAAAGCTTTTTCTGTGTCAAGATTA 58.229 30.769 9.53 0.00 28.67 1.75
124 125 6.633856 ACAAAGCTTTTTCTGTGTCAAGATT 58.366 32.000 9.53 0.00 28.67 2.40
125 126 6.212888 ACAAAGCTTTTTCTGTGTCAAGAT 57.787 33.333 9.53 0.00 28.67 2.40
126 127 5.643379 ACAAAGCTTTTTCTGTGTCAAGA 57.357 34.783 9.53 0.00 28.67 3.02
127 128 5.445010 GCAACAAAGCTTTTTCTGTGTCAAG 60.445 40.000 9.53 0.00 33.58 3.02
128 129 4.388469 GCAACAAAGCTTTTTCTGTGTCAA 59.612 37.500 9.53 0.00 33.58 3.18
129 130 3.925913 GCAACAAAGCTTTTTCTGTGTCA 59.074 39.130 9.53 0.00 33.58 3.58
130 131 3.925913 TGCAACAAAGCTTTTTCTGTGTC 59.074 39.130 9.53 1.91 33.58 3.67
131 132 3.924144 TGCAACAAAGCTTTTTCTGTGT 58.076 36.364 9.53 0.53 36.13 3.72
132 133 4.925061 TTGCAACAAAGCTTTTTCTGTG 57.075 36.364 9.53 0.00 34.99 3.66
133 134 5.938438 TTTTGCAACAAAGCTTTTTCTGT 57.062 30.435 9.53 1.79 34.99 3.41
134 135 5.740099 CCATTTTGCAACAAAGCTTTTTCTG 59.260 36.000 9.53 8.15 34.99 3.02
135 136 5.647225 TCCATTTTGCAACAAAGCTTTTTCT 59.353 32.000 9.53 0.00 34.99 2.52
136 137 5.878133 TCCATTTTGCAACAAAGCTTTTTC 58.122 33.333 9.53 0.00 34.99 2.29
137 138 5.647225 TCTCCATTTTGCAACAAAGCTTTTT 59.353 32.000 9.53 0.00 34.99 1.94
138 139 5.184711 TCTCCATTTTGCAACAAAGCTTTT 58.815 33.333 9.53 0.00 34.99 2.27
139 140 4.768583 TCTCCATTTTGCAACAAAGCTTT 58.231 34.783 5.69 5.69 34.99 3.51
140 141 4.374399 CTCTCCATTTTGCAACAAAGCTT 58.626 39.130 0.00 0.00 34.99 3.74
141 142 3.243975 CCTCTCCATTTTGCAACAAAGCT 60.244 43.478 0.00 0.00 34.99 3.74
142 143 3.062042 CCTCTCCATTTTGCAACAAAGC 58.938 45.455 0.00 0.00 0.00 3.51
143 144 4.326504 ACCTCTCCATTTTGCAACAAAG 57.673 40.909 0.00 0.00 0.00 2.77
144 145 4.442753 GGAACCTCTCCATTTTGCAACAAA 60.443 41.667 0.00 0.00 44.67 2.83
145 146 3.069443 GGAACCTCTCCATTTTGCAACAA 59.931 43.478 0.00 0.00 44.67 2.83
146 147 2.627699 GGAACCTCTCCATTTTGCAACA 59.372 45.455 0.00 0.00 44.67 3.33
147 148 3.303881 GGAACCTCTCCATTTTGCAAC 57.696 47.619 0.00 0.00 44.67 4.17
163 164 2.007608 GCTAAGTGGATTCGGTGGAAC 58.992 52.381 0.00 0.00 34.37 3.62
164 165 1.906574 AGCTAAGTGGATTCGGTGGAA 59.093 47.619 0.00 0.00 36.41 3.53
165 166 1.480954 GAGCTAAGTGGATTCGGTGGA 59.519 52.381 0.00 0.00 0.00 4.02
166 167 1.473434 GGAGCTAAGTGGATTCGGTGG 60.473 57.143 0.00 0.00 0.00 4.61
167 168 1.207089 TGGAGCTAAGTGGATTCGGTG 59.793 52.381 0.00 0.00 0.00 4.94
168 169 1.568504 TGGAGCTAAGTGGATTCGGT 58.431 50.000 0.00 0.00 0.00 4.69
169 170 2.691409 TTGGAGCTAAGTGGATTCGG 57.309 50.000 0.00 0.00 0.00 4.30
170 171 3.127030 GGTTTTGGAGCTAAGTGGATTCG 59.873 47.826 0.00 0.00 0.00 3.34
171 172 3.444034 GGGTTTTGGAGCTAAGTGGATTC 59.556 47.826 0.00 0.00 0.00 2.52
172 173 3.431415 GGGTTTTGGAGCTAAGTGGATT 58.569 45.455 0.00 0.00 0.00 3.01
173 174 2.291605 GGGGTTTTGGAGCTAAGTGGAT 60.292 50.000 0.00 0.00 0.00 3.41
174 175 1.074889 GGGGTTTTGGAGCTAAGTGGA 59.925 52.381 0.00 0.00 0.00 4.02
175 176 1.075536 AGGGGTTTTGGAGCTAAGTGG 59.924 52.381 0.00 0.00 0.00 4.00
176 177 2.586648 AGGGGTTTTGGAGCTAAGTG 57.413 50.000 0.00 0.00 0.00 3.16
177 178 3.527937 TCTAGGGGTTTTGGAGCTAAGT 58.472 45.455 0.00 0.00 0.00 2.24
178 179 4.019231 ACTTCTAGGGGTTTTGGAGCTAAG 60.019 45.833 0.00 0.00 0.00 2.18
179 180 3.914435 ACTTCTAGGGGTTTTGGAGCTAA 59.086 43.478 0.00 0.00 0.00 3.09
180 181 3.527937 ACTTCTAGGGGTTTTGGAGCTA 58.472 45.455 0.00 0.00 0.00 3.32
181 182 2.349445 ACTTCTAGGGGTTTTGGAGCT 58.651 47.619 0.00 0.00 0.00 4.09
182 183 2.881111 ACTTCTAGGGGTTTTGGAGC 57.119 50.000 0.00 0.00 0.00 4.70
183 184 4.262617 GCTAACTTCTAGGGGTTTTGGAG 58.737 47.826 6.57 1.30 0.00 3.86
184 185 3.653836 TGCTAACTTCTAGGGGTTTTGGA 59.346 43.478 6.57 1.35 0.00 3.53
185 186 4.028993 TGCTAACTTCTAGGGGTTTTGG 57.971 45.455 6.57 1.58 0.00 3.28
186 187 5.501156 AGATGCTAACTTCTAGGGGTTTTG 58.499 41.667 6.57 3.35 0.00 2.44
187 188 5.489278 AGAGATGCTAACTTCTAGGGGTTTT 59.511 40.000 6.57 0.00 30.82 2.43
188 189 5.033522 AGAGATGCTAACTTCTAGGGGTTT 58.966 41.667 6.57 0.00 30.82 3.27
189 190 4.625963 AGAGATGCTAACTTCTAGGGGTT 58.374 43.478 6.51 6.51 30.82 4.11
190 191 4.273300 AGAGATGCTAACTTCTAGGGGT 57.727 45.455 0.00 0.00 30.82 4.95
191 192 5.390387 AGTAGAGATGCTAACTTCTAGGGG 58.610 45.833 0.00 0.00 30.82 4.79
192 193 7.455058 TCTAGTAGAGATGCTAACTTCTAGGG 58.545 42.308 0.00 0.00 30.82 3.53
193 194 8.911918 TTCTAGTAGAGATGCTAACTTCTAGG 57.088 38.462 0.00 0.00 32.88 3.02
197 198 9.471084 GGATTTTCTAGTAGAGATGCTAACTTC 57.529 37.037 0.00 0.00 32.88 3.01
198 199 8.425703 GGGATTTTCTAGTAGAGATGCTAACTT 58.574 37.037 13.20 0.00 32.88 2.66
199 200 7.565398 TGGGATTTTCTAGTAGAGATGCTAACT 59.435 37.037 13.20 0.00 32.88 2.24
200 201 7.727181 TGGGATTTTCTAGTAGAGATGCTAAC 58.273 38.462 13.20 3.06 32.88 2.34
201 202 7.565398 ACTGGGATTTTCTAGTAGAGATGCTAA 59.435 37.037 13.20 0.00 32.88 3.09
202 203 7.069986 ACTGGGATTTTCTAGTAGAGATGCTA 58.930 38.462 13.20 8.82 32.88 3.49
203 204 5.902431 ACTGGGATTTTCTAGTAGAGATGCT 59.098 40.000 13.20 0.00 32.88 3.79
204 205 6.168270 ACTGGGATTTTCTAGTAGAGATGC 57.832 41.667 0.00 4.61 32.88 3.91
205 206 9.535878 GTAAACTGGGATTTTCTAGTAGAGATG 57.464 37.037 0.00 0.00 32.88 2.90
206 207 9.268282 TGTAAACTGGGATTTTCTAGTAGAGAT 57.732 33.333 0.00 0.00 32.88 2.75
207 208 8.529476 GTGTAAACTGGGATTTTCTAGTAGAGA 58.471 37.037 0.00 0.00 0.00 3.10
208 209 7.488471 CGTGTAAACTGGGATTTTCTAGTAGAG 59.512 40.741 0.00 0.00 0.00 2.43
209 210 7.177216 TCGTGTAAACTGGGATTTTCTAGTAGA 59.823 37.037 0.00 0.00 0.00 2.59
210 211 7.318141 TCGTGTAAACTGGGATTTTCTAGTAG 58.682 38.462 0.00 0.00 0.00 2.57
211 212 7.230849 TCGTGTAAACTGGGATTTTCTAGTA 57.769 36.000 0.00 0.00 0.00 1.82
212 213 6.105397 TCGTGTAAACTGGGATTTTCTAGT 57.895 37.500 0.00 0.00 0.00 2.57
213 214 6.019801 CGATCGTGTAAACTGGGATTTTCTAG 60.020 42.308 7.03 0.00 0.00 2.43
214 215 5.808540 CGATCGTGTAAACTGGGATTTTCTA 59.191 40.000 7.03 0.00 0.00 2.10
215 216 4.630069 CGATCGTGTAAACTGGGATTTTCT 59.370 41.667 7.03 0.00 0.00 2.52
216 217 4.390909 ACGATCGTGTAAACTGGGATTTTC 59.609 41.667 22.06 0.00 0.00 2.29
217 218 4.320870 ACGATCGTGTAAACTGGGATTTT 58.679 39.130 22.06 0.00 0.00 1.82
218 219 3.934068 ACGATCGTGTAAACTGGGATTT 58.066 40.909 22.06 0.00 0.00 2.17
219 220 3.604875 ACGATCGTGTAAACTGGGATT 57.395 42.857 22.06 0.00 0.00 3.01
220 221 3.067742 CCTACGATCGTGTAAACTGGGAT 59.932 47.826 30.23 0.88 0.00 3.85
221 222 2.424601 CCTACGATCGTGTAAACTGGGA 59.575 50.000 30.23 5.43 0.00 4.37
222 223 2.805845 CCTACGATCGTGTAAACTGGG 58.194 52.381 30.23 9.27 0.00 4.45
223 224 2.159282 AGCCTACGATCGTGTAAACTGG 60.159 50.000 30.23 18.69 0.00 4.00
224 225 3.146618 AGCCTACGATCGTGTAAACTG 57.853 47.619 30.23 11.18 0.00 3.16
225 226 3.863142 AAGCCTACGATCGTGTAAACT 57.137 42.857 30.23 16.42 0.00 2.66
226 227 4.171754 AGAAAGCCTACGATCGTGTAAAC 58.828 43.478 30.23 14.51 0.00 2.01
227 228 4.082625 TGAGAAAGCCTACGATCGTGTAAA 60.083 41.667 30.23 9.72 0.00 2.01
228 229 3.441222 TGAGAAAGCCTACGATCGTGTAA 59.559 43.478 30.23 10.11 0.00 2.41
229 230 3.011818 TGAGAAAGCCTACGATCGTGTA 58.988 45.455 30.23 10.90 0.00 2.90
230 231 1.816835 TGAGAAAGCCTACGATCGTGT 59.183 47.619 30.23 7.29 0.00 4.49
231 232 2.561733 TGAGAAAGCCTACGATCGTG 57.438 50.000 30.23 18.80 0.00 4.35
232 233 4.913335 TTATGAGAAAGCCTACGATCGT 57.087 40.909 25.94 25.94 0.00 3.73
233 234 5.704888 AGATTATGAGAAAGCCTACGATCG 58.295 41.667 14.88 14.88 0.00 3.69
234 235 8.301002 AGTTAGATTATGAGAAAGCCTACGATC 58.699 37.037 0.00 0.00 0.00 3.69
235 236 8.184304 AGTTAGATTATGAGAAAGCCTACGAT 57.816 34.615 0.00 0.00 0.00 3.73
236 237 7.584122 AGTTAGATTATGAGAAAGCCTACGA 57.416 36.000 0.00 0.00 0.00 3.43
237 238 7.921214 TCAAGTTAGATTATGAGAAAGCCTACG 59.079 37.037 0.00 0.00 0.00 3.51
238 239 9.255304 CTCAAGTTAGATTATGAGAAAGCCTAC 57.745 37.037 0.00 0.00 41.38 3.18
239 240 7.928706 GCTCAAGTTAGATTATGAGAAAGCCTA 59.071 37.037 5.85 0.00 41.38 3.93
240 241 6.765512 GCTCAAGTTAGATTATGAGAAAGCCT 59.234 38.462 5.85 0.00 41.38 4.58
241 242 6.540189 TGCTCAAGTTAGATTATGAGAAAGCC 59.460 38.462 5.85 0.00 41.38 4.35
242 243 7.065085 TGTGCTCAAGTTAGATTATGAGAAAGC 59.935 37.037 5.85 0.00 41.38 3.51
243 244 8.484641 TGTGCTCAAGTTAGATTATGAGAAAG 57.515 34.615 5.85 0.00 41.38 2.62
244 245 8.846943 TTGTGCTCAAGTTAGATTATGAGAAA 57.153 30.769 5.85 0.00 41.38 2.52
245 246 9.453572 AATTGTGCTCAAGTTAGATTATGAGAA 57.546 29.630 7.35 0.00 41.38 2.87
246 247 9.102757 GAATTGTGCTCAAGTTAGATTATGAGA 57.897 33.333 7.35 0.00 41.38 3.27
247 248 8.341173 GGAATTGTGCTCAAGTTAGATTATGAG 58.659 37.037 7.35 0.00 41.69 2.90
248 249 7.828717 TGGAATTGTGCTCAAGTTAGATTATGA 59.171 33.333 7.35 0.00 36.97 2.15
249 250 7.988737 TGGAATTGTGCTCAAGTTAGATTATG 58.011 34.615 7.35 0.00 36.97 1.90
250 251 7.284034 CCTGGAATTGTGCTCAAGTTAGATTAT 59.716 37.037 7.35 0.00 36.97 1.28
251 252 6.599244 CCTGGAATTGTGCTCAAGTTAGATTA 59.401 38.462 7.35 0.00 36.97 1.75
252 253 5.416952 CCTGGAATTGTGCTCAAGTTAGATT 59.583 40.000 7.35 0.00 36.97 2.40
253 254 4.946157 CCTGGAATTGTGCTCAAGTTAGAT 59.054 41.667 7.35 0.00 36.97 1.98
254 255 4.326826 CCTGGAATTGTGCTCAAGTTAGA 58.673 43.478 7.35 0.00 36.97 2.10
255 256 3.119708 GCCTGGAATTGTGCTCAAGTTAG 60.120 47.826 7.35 7.14 36.97 2.34
256 257 2.819608 GCCTGGAATTGTGCTCAAGTTA 59.180 45.455 7.35 0.00 36.97 2.24
257 258 1.615392 GCCTGGAATTGTGCTCAAGTT 59.385 47.619 7.35 2.32 36.97 2.66
258 259 1.202976 AGCCTGGAATTGTGCTCAAGT 60.203 47.619 7.35 4.12 36.97 3.16
259 260 1.542492 AGCCTGGAATTGTGCTCAAG 58.458 50.000 7.35 0.00 36.97 3.02
260 261 3.751767 AGCCTGGAATTGTGCTCAA 57.248 47.368 3.31 3.31 37.98 3.02
263 264 1.000396 GGGAGCCTGGAATTGTGCT 60.000 57.895 0.00 0.00 36.62 4.40
264 265 1.000396 AGGGAGCCTGGAATTGTGC 60.000 57.895 0.00 0.00 29.57 4.57
265 266 0.745845 CGAGGGAGCCTGGAATTGTG 60.746 60.000 0.00 0.00 31.76 3.33
266 267 0.909610 TCGAGGGAGCCTGGAATTGT 60.910 55.000 0.00 0.00 35.50 2.71
267 268 0.471617 ATCGAGGGAGCCTGGAATTG 59.528 55.000 0.00 0.00 41.43 2.32
268 269 1.216990 AATCGAGGGAGCCTGGAATT 58.783 50.000 0.00 0.00 41.43 2.17
269 270 1.133976 CAAATCGAGGGAGCCTGGAAT 60.134 52.381 0.00 0.00 41.43 3.01
270 271 0.253044 CAAATCGAGGGAGCCTGGAA 59.747 55.000 0.00 0.00 41.43 3.53
271 272 0.909610 ACAAATCGAGGGAGCCTGGA 60.910 55.000 0.00 0.00 42.25 3.86
272 273 0.745845 CACAAATCGAGGGAGCCTGG 60.746 60.000 0.00 0.00 31.76 4.45
273 274 1.372087 GCACAAATCGAGGGAGCCTG 61.372 60.000 0.00 0.00 31.76 4.85
274 275 1.078143 GCACAAATCGAGGGAGCCT 60.078 57.895 0.00 0.00 36.03 4.58
275 276 0.960364 TTGCACAAATCGAGGGAGCC 60.960 55.000 0.00 0.00 0.00 4.70
276 277 1.098050 ATTGCACAAATCGAGGGAGC 58.902 50.000 0.00 0.00 0.00 4.70
277 278 2.749076 TGAATTGCACAAATCGAGGGAG 59.251 45.455 0.00 0.00 0.00 4.30
278 279 2.789213 TGAATTGCACAAATCGAGGGA 58.211 42.857 0.00 0.00 0.00 4.20
279 280 3.119388 ACATGAATTGCACAAATCGAGGG 60.119 43.478 0.00 0.00 0.00 4.30
280 281 4.100707 ACATGAATTGCACAAATCGAGG 57.899 40.909 0.00 0.00 0.00 4.63
281 282 7.073883 CCTATACATGAATTGCACAAATCGAG 58.926 38.462 0.00 0.00 0.00 4.04
282 283 6.017192 CCCTATACATGAATTGCACAAATCGA 60.017 38.462 0.00 0.00 0.00 3.59
283 284 6.144854 CCCTATACATGAATTGCACAAATCG 58.855 40.000 0.00 0.00 0.00 3.34
284 285 6.265196 TCCCCTATACATGAATTGCACAAATC 59.735 38.462 0.00 0.00 0.00 2.17
285 286 6.040842 GTCCCCTATACATGAATTGCACAAAT 59.959 38.462 0.00 0.00 0.00 2.32
286 287 5.359576 GTCCCCTATACATGAATTGCACAAA 59.640 40.000 0.00 0.00 0.00 2.83
287 288 4.887071 GTCCCCTATACATGAATTGCACAA 59.113 41.667 0.00 0.00 0.00 3.33
288 289 4.080072 TGTCCCCTATACATGAATTGCACA 60.080 41.667 0.00 0.00 0.00 4.57
289 290 4.460263 TGTCCCCTATACATGAATTGCAC 58.540 43.478 0.00 0.00 0.00 4.57
290 291 4.787135 TGTCCCCTATACATGAATTGCA 57.213 40.909 0.00 0.00 0.00 4.08
298 299 4.108778 AGAGAGTCCATGTCCCCTATACAT 59.891 45.833 0.00 0.00 38.08 2.29
299 300 3.467483 AGAGAGTCCATGTCCCCTATACA 59.533 47.826 0.00 0.00 0.00 2.29
300 301 4.120946 AGAGAGTCCATGTCCCCTATAC 57.879 50.000 0.00 0.00 0.00 1.47
301 302 5.170959 TCTAGAGAGTCCATGTCCCCTATA 58.829 45.833 0.00 0.00 0.00 1.31
302 303 3.990933 TCTAGAGAGTCCATGTCCCCTAT 59.009 47.826 0.00 0.00 0.00 2.57
303 304 3.396276 CTCTAGAGAGTCCATGTCCCCTA 59.604 52.174 15.05 0.00 37.40 3.53
304 305 2.176798 CTCTAGAGAGTCCATGTCCCCT 59.823 54.545 15.05 0.00 37.40 4.79
350 351 9.288576 TGATGACAAATAACATGTCTTTCTCTT 57.711 29.630 0.00 0.00 45.81 2.85
415 417 3.559242 CCGTGTGTTGCCATGAAATTTTT 59.441 39.130 0.00 0.00 0.00 1.94
418 420 1.605202 GCCGTGTGTTGCCATGAAATT 60.605 47.619 0.00 0.00 0.00 1.82
516 521 0.179108 GGCAGTCACTATCCGTCCAC 60.179 60.000 0.00 0.00 0.00 4.02
628 633 2.654079 CGACCCTTCTGGCTGAGCT 61.654 63.158 3.72 0.00 37.83 4.09
645 653 1.804326 CGGGAGACAGTAAACGGCG 60.804 63.158 4.80 4.80 0.00 6.46
702 718 3.723348 GAACGTGGTTCTGGCCGC 61.723 66.667 0.00 0.00 39.23 6.53
800 825 1.231958 TGGACGCGGTTTAGCTTTGG 61.232 55.000 12.47 0.00 34.40 3.28
801 826 0.110373 GTGGACGCGGTTTAGCTTTG 60.110 55.000 12.47 0.00 34.40 2.77
802 827 1.232621 GGTGGACGCGGTTTAGCTTT 61.233 55.000 12.47 0.00 34.40 3.51
803 828 1.670083 GGTGGACGCGGTTTAGCTT 60.670 57.895 12.47 0.00 34.40 3.74
1152 1208 1.444836 GGCAGTTGTTGGCGTACATA 58.555 50.000 0.00 0.00 42.97 2.29
1499 1565 1.676635 GAGGCTGAGCATGTTGGCA 60.677 57.895 6.82 0.00 35.83 4.92
1570 1636 3.712907 TTCCGGGGAAGAAGGCCG 61.713 66.667 0.00 0.00 0.00 6.13
1571 1637 2.045242 GTTCCGGGGAAGAAGGCC 60.045 66.667 0.00 0.00 34.49 5.19
1572 1638 1.377333 CAGTTCCGGGGAAGAAGGC 60.377 63.158 0.00 0.00 34.49 4.35
1573 1639 0.036294 GTCAGTTCCGGGGAAGAAGG 60.036 60.000 0.00 0.00 34.49 3.46
1574 1640 0.685097 TGTCAGTTCCGGGGAAGAAG 59.315 55.000 0.00 0.00 34.49 2.85
1612 1678 9.803315 GGAACAAAGTTAGTTCAGATTTCTTTT 57.197 29.630 8.15 0.00 45.45 2.27
1613 1679 8.414003 GGGAACAAAGTTAGTTCAGATTTCTTT 58.586 33.333 8.15 0.00 45.45 2.52
1614 1680 7.255139 CGGGAACAAAGTTAGTTCAGATTTCTT 60.255 37.037 8.15 0.00 45.45 2.52
1619 1742 4.755123 CACGGGAACAAAGTTAGTTCAGAT 59.245 41.667 8.15 0.00 45.45 2.90
1631 1754 3.696898 CAACGAAATTCACGGGAACAAA 58.303 40.909 0.00 0.00 35.46 2.83
2182 2906 3.120321 ACCTAAACTCACGCAATGTCA 57.880 42.857 0.00 0.00 0.00 3.58
2188 2912 2.289195 CCACCTAACCTAAACTCACGCA 60.289 50.000 0.00 0.00 0.00 5.24
2189 2913 2.344025 CCACCTAACCTAAACTCACGC 58.656 52.381 0.00 0.00 0.00 5.34
2191 2915 2.305052 AGCCCACCTAACCTAAACTCAC 59.695 50.000 0.00 0.00 0.00 3.51
2198 2927 0.714180 TCCAGAGCCCACCTAACCTA 59.286 55.000 0.00 0.00 0.00 3.08
2201 2930 0.984995 AAGTCCAGAGCCCACCTAAC 59.015 55.000 0.00 0.00 0.00 2.34
2343 3072 3.094062 GCAGCTCCATCTGGCGGTA 62.094 63.158 0.00 0.00 34.74 4.02
2533 3267 6.060788 GCAGGTGGAAGATTCAAGATATTCT 58.939 40.000 0.00 0.00 0.00 2.40
2678 3416 2.093306 TAATCTGCACCGACCAGTTG 57.907 50.000 0.00 0.00 0.00 3.16
2778 3519 1.485895 TGACTGGAATGCCGATCATCA 59.514 47.619 0.00 0.00 36.79 3.07
2782 3534 1.936547 GTTCTGACTGGAATGCCGATC 59.063 52.381 0.00 0.00 36.79 3.69
2783 3535 1.278985 TGTTCTGACTGGAATGCCGAT 59.721 47.619 0.00 0.00 36.79 4.18
2832 3587 4.152625 CTACAGCCGCGCTTGCAC 62.153 66.667 19.03 0.00 36.40 4.57
2924 3682 9.892130 CTCATATTTGTTTAAGGAGGAAGTACT 57.108 33.333 0.00 0.00 0.00 2.73
2925 3683 9.668497 ACTCATATTTGTTTAAGGAGGAAGTAC 57.332 33.333 0.00 0.00 0.00 2.73
2926 3684 9.667107 CACTCATATTTGTTTAAGGAGGAAGTA 57.333 33.333 0.00 0.00 0.00 2.24
2927 3685 7.121315 GCACTCATATTTGTTTAAGGAGGAAGT 59.879 37.037 0.00 0.00 0.00 3.01
2928 3686 7.337942 AGCACTCATATTTGTTTAAGGAGGAAG 59.662 37.037 0.00 0.00 0.00 3.46
2929 3687 7.175104 AGCACTCATATTTGTTTAAGGAGGAA 58.825 34.615 0.00 0.00 0.00 3.36
2930 3688 6.721318 AGCACTCATATTTGTTTAAGGAGGA 58.279 36.000 0.00 0.00 0.00 3.71
2931 3689 7.396540 AAGCACTCATATTTGTTTAAGGAGG 57.603 36.000 0.00 0.00 0.00 4.30
2932 3690 9.994432 CTAAAGCACTCATATTTGTTTAAGGAG 57.006 33.333 0.00 0.00 0.00 3.69
2933 3691 9.515226 ACTAAAGCACTCATATTTGTTTAAGGA 57.485 29.630 0.00 0.00 0.00 3.36
2934 3692 9.559958 CACTAAAGCACTCATATTTGTTTAAGG 57.440 33.333 0.00 0.00 0.00 2.69
2938 3696 9.236006 AGATCACTAAAGCACTCATATTTGTTT 57.764 29.630 0.00 0.00 0.00 2.83
2939 3697 8.798859 AGATCACTAAAGCACTCATATTTGTT 57.201 30.769 0.00 0.00 0.00 2.83
2940 3698 9.890629 TTAGATCACTAAAGCACTCATATTTGT 57.109 29.630 0.00 0.00 35.92 2.83
2943 3701 9.035607 CGTTTAGATCACTAAAGCACTCATATT 57.964 33.333 0.00 0.00 45.42 1.28
2944 3702 7.169982 GCGTTTAGATCACTAAAGCACTCATAT 59.830 37.037 0.00 0.00 45.42 1.78
2945 3703 6.475727 GCGTTTAGATCACTAAAGCACTCATA 59.524 38.462 0.00 0.00 45.42 2.15
2946 3704 5.292101 GCGTTTAGATCACTAAAGCACTCAT 59.708 40.000 0.00 0.00 45.42 2.90
2947 3705 4.625742 GCGTTTAGATCACTAAAGCACTCA 59.374 41.667 0.00 0.00 45.42 3.41
2948 3706 4.865365 AGCGTTTAGATCACTAAAGCACTC 59.135 41.667 17.18 3.83 45.42 3.51
2949 3707 4.822026 AGCGTTTAGATCACTAAAGCACT 58.178 39.130 17.18 8.64 45.42 4.40
2950 3708 6.830114 ATAGCGTTTAGATCACTAAAGCAC 57.170 37.500 17.18 7.25 45.42 4.40
2965 3723 8.985805 CCTCCGTAAAGAAATATAATAGCGTTT 58.014 33.333 0.00 0.00 0.00 3.60
2966 3724 7.601508 CCCTCCGTAAAGAAATATAATAGCGTT 59.398 37.037 0.00 0.00 0.00 4.84
2967 3725 7.039504 TCCCTCCGTAAAGAAATATAATAGCGT 60.040 37.037 0.00 0.00 0.00 5.07
2968 3726 7.318141 TCCCTCCGTAAAGAAATATAATAGCG 58.682 38.462 0.00 0.00 0.00 4.26
2969 3727 8.312564 ACTCCCTCCGTAAAGAAATATAATAGC 58.687 37.037 0.00 0.00 0.00 2.97
2972 3730 9.151177 TGTACTCCCTCCGTAAAGAAATATAAT 57.849 33.333 0.00 0.00 0.00 1.28
2973 3731 8.537728 TGTACTCCCTCCGTAAAGAAATATAA 57.462 34.615 0.00 0.00 0.00 0.98
2974 3732 8.537728 TTGTACTCCCTCCGTAAAGAAATATA 57.462 34.615 0.00 0.00 0.00 0.86
2975 3733 7.427989 TTGTACTCCCTCCGTAAAGAAATAT 57.572 36.000 0.00 0.00 0.00 1.28
2976 3734 6.855763 TTGTACTCCCTCCGTAAAGAAATA 57.144 37.500 0.00 0.00 0.00 1.40
2977 3735 5.750352 TTGTACTCCCTCCGTAAAGAAAT 57.250 39.130 0.00 0.00 0.00 2.17
2978 3736 5.549742 TTTGTACTCCCTCCGTAAAGAAA 57.450 39.130 0.00 0.00 0.00 2.52
2979 3737 5.549742 TTTTGTACTCCCTCCGTAAAGAA 57.450 39.130 0.00 0.00 0.00 2.52
2980 3738 5.750352 ATTTTGTACTCCCTCCGTAAAGA 57.250 39.130 0.00 0.00 0.00 2.52
2981 3739 7.148356 GGTTAATTTTGTACTCCCTCCGTAAAG 60.148 40.741 0.00 0.00 0.00 1.85
2982 3740 6.654582 GGTTAATTTTGTACTCCCTCCGTAAA 59.345 38.462 0.00 0.00 0.00 2.01
2983 3741 6.172630 GGTTAATTTTGTACTCCCTCCGTAA 58.827 40.000 0.00 0.00 0.00 3.18
2984 3742 5.248020 TGGTTAATTTTGTACTCCCTCCGTA 59.752 40.000 0.00 0.00 0.00 4.02
2985 3743 4.041938 TGGTTAATTTTGTACTCCCTCCGT 59.958 41.667 0.00 0.00 0.00 4.69
2986 3744 4.393990 GTGGTTAATTTTGTACTCCCTCCG 59.606 45.833 0.00 0.00 0.00 4.63
2987 3745 5.318630 TGTGGTTAATTTTGTACTCCCTCC 58.681 41.667 0.00 0.00 0.00 4.30
2988 3746 6.127730 CCATGTGGTTAATTTTGTACTCCCTC 60.128 42.308 0.00 0.00 0.00 4.30
2989 3747 5.714806 CCATGTGGTTAATTTTGTACTCCCT 59.285 40.000 0.00 0.00 0.00 4.20
2990 3748 5.961272 CCATGTGGTTAATTTTGTACTCCC 58.039 41.667 0.00 0.00 0.00 4.30
3030 3788 9.289782 GAAAAGATAATATAACTCCTGCCATGT 57.710 33.333 0.00 0.00 0.00 3.21
3055 3813 8.094798 AGATTTAAGTATGTTTTTGAGCACGA 57.905 30.769 0.00 0.00 0.00 4.35
3056 3814 9.478019 CTAGATTTAAGTATGTTTTTGAGCACG 57.522 33.333 0.00 0.00 0.00 5.34
3116 3874 4.332543 TGATTCGTGCCATATTGAGTGTTC 59.667 41.667 0.00 0.00 0.00 3.18
3123 3881 6.544038 TTAGTGATGATTCGTGCCATATTG 57.456 37.500 0.00 0.00 0.00 1.90
3124 3882 7.566760 TTTTAGTGATGATTCGTGCCATATT 57.433 32.000 0.00 0.00 0.00 1.28
3169 3928 5.859648 GTGAAAACAAGTTTCTTTGGTTCGA 59.140 36.000 0.00 0.00 45.14 3.71
3178 3937 5.016831 AGGAAGGTGTGAAAACAAGTTTCT 58.983 37.500 0.00 0.00 45.14 2.52
3223 3983 1.714794 CGAACCTTCTCAAGCACGAT 58.285 50.000 0.00 0.00 0.00 3.73
3311 4071 4.084888 CGCCGACCAAAGGAACGC 62.085 66.667 0.00 0.00 0.00 4.84
3340 4100 2.159920 CGACTCGCACAACAAGATTCTG 60.160 50.000 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.