Multiple sequence alignment - TraesCS1D01G178600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G178600 chr1D 100.000 4349 0 0 1 4349 253529870 253525522 0.000000e+00 8032.0
1 TraesCS1D01G178600 chr1D 93.243 296 18 1 2 295 137465634 137465339 6.680000e-118 435.0
2 TraesCS1D01G178600 chr1D 95.714 70 3 0 3856 3925 326159365 326159434 3.550000e-21 113.0
3 TraesCS1D01G178600 chr1D 78.723 141 15 11 3789 3928 477288512 477288386 3.610000e-11 80.5
4 TraesCS1D01G178600 chr1B 95.479 3827 105 27 289 4098 358837731 358841506 0.000000e+00 6047.0
5 TraesCS1D01G178600 chr1B 93.333 75 5 0 3851 3925 8253659 8253733 1.280000e-20 111.0
6 TraesCS1D01G178600 chr1A 95.413 3292 80 25 739 4005 325781890 325785135 0.000000e+00 5177.0
7 TraesCS1D01G178600 chr1A 91.939 459 23 7 289 734 325781396 325781853 7.940000e-177 630.0
8 TraesCS1D01G178600 chr1A 93.243 296 18 1 2 295 116528887 116528592 6.680000e-118 435.0
9 TraesCS1D01G178600 chr1A 87.983 233 27 1 4116 4347 520339518 520339286 1.540000e-69 274.0
10 TraesCS1D01G178600 chr1A 93.333 75 5 0 3851 3925 568391276 568391202 1.280000e-20 111.0
11 TraesCS1D01G178600 chr1A 97.143 35 1 0 3964 3998 325785132 325785166 4.700000e-05 60.2
12 TraesCS1D01G178600 chr1A 94.595 37 2 0 3994 4030 325785190 325785226 1.690000e-04 58.4
13 TraesCS1D01G178600 chr3B 88.456 641 73 1 1229 1869 286217075 286217714 0.000000e+00 773.0
14 TraesCS1D01G178600 chr3B 93.750 48 2 1 3805 3851 112276976 112277023 2.170000e-08 71.3
15 TraesCS1D01G178600 chr7B 88.456 641 58 2 1229 1869 305155527 305154903 0.000000e+00 760.0
16 TraesCS1D01G178600 chr6A 95.455 462 20 1 1229 1690 349933734 349934194 0.000000e+00 736.0
17 TraesCS1D01G178600 chr6A 95.105 143 7 0 1727 1869 349934194 349934336 4.380000e-55 226.0
18 TraesCS1D01G178600 chr4B 93.836 292 16 1 3 292 463328094 463327803 5.160000e-119 438.0
19 TraesCS1D01G178600 chr7D 93.243 296 18 1 2 295 281029992 281029697 6.680000e-118 435.0
20 TraesCS1D01G178600 chr7D 88.136 236 21 5 4117 4348 629584711 629584943 1.540000e-69 274.0
21 TraesCS1D01G178600 chr4D 93.515 293 17 1 2 292 52769547 52769255 6.680000e-118 435.0
22 TraesCS1D01G178600 chr4D 88.841 233 23 3 4116 4347 15347570 15347800 2.560000e-72 283.0
23 TraesCS1D01G178600 chr4D 93.478 46 2 1 3800 3844 58265905 58265950 2.810000e-07 67.6
24 TraesCS1D01G178600 chr3D 93.243 296 18 1 2 295 138158015 138157720 6.680000e-118 435.0
25 TraesCS1D01G178600 chr3D 93.243 296 18 1 2 295 246553642 246553347 6.680000e-118 435.0
26 TraesCS1D01G178600 chr3D 93.243 296 18 1 2 295 366361319 366361024 6.680000e-118 435.0
27 TraesCS1D01G178600 chr3D 93.197 294 20 0 2 295 317119723 317119430 2.400000e-117 433.0
28 TraesCS1D01G178600 chr3D 89.700 233 23 1 4116 4348 548731287 548731056 3.290000e-76 296.0
29 TraesCS1D01G178600 chr3D 88.511 235 24 3 4116 4347 25967425 25967191 9.210000e-72 281.0
30 TraesCS1D01G178600 chr7A 89.744 234 17 4 4117 4347 655372884 655373113 4.250000e-75 292.0
31 TraesCS1D01G178600 chr7A 96.000 75 3 0 3851 3925 190473054 190472980 5.910000e-24 122.0
32 TraesCS1D01G178600 chr7A 83.898 118 10 6 3815 3925 143359403 143359518 2.140000e-18 104.0
33 TraesCS1D01G178600 chr2B 89.224 232 21 2 4116 4346 137261292 137261520 1.980000e-73 287.0
34 TraesCS1D01G178600 chr2B 91.250 80 5 2 3851 3930 692467735 692467658 1.650000e-19 108.0
35 TraesCS1D01G178600 chr4A 89.270 233 18 5 4119 4348 583164462 583164690 7.120000e-73 285.0
36 TraesCS1D01G178600 chr5D 88.085 235 23 4 4116 4347 551073264 551073032 1.540000e-69 274.0
37 TraesCS1D01G178600 chr5D 95.238 42 2 0 3807 3848 481255897 481255938 2.810000e-07 67.6
38 TraesCS1D01G178600 chr2D 92.308 78 5 1 3851 3928 313635451 313635375 4.600000e-20 110.0
39 TraesCS1D01G178600 chr5A 95.455 44 1 1 3809 3851 680077929 680077972 7.800000e-08 69.4
40 TraesCS1D01G178600 chr6B 97.500 40 0 1 3812 3851 164040176 164040214 2.810000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G178600 chr1D 253525522 253529870 4348 True 8032.0 8032 100.0000 1 4349 1 chr1D.!!$R2 4348
1 TraesCS1D01G178600 chr1B 358837731 358841506 3775 False 6047.0 6047 95.4790 289 4098 1 chr1B.!!$F2 3809
2 TraesCS1D01G178600 chr1A 325781396 325785226 3830 False 1481.4 5177 94.7725 289 4030 4 chr1A.!!$F1 3741
3 TraesCS1D01G178600 chr3B 286217075 286217714 639 False 773.0 773 88.4560 1229 1869 1 chr3B.!!$F2 640
4 TraesCS1D01G178600 chr7B 305154903 305155527 624 True 760.0 760 88.4560 1229 1869 1 chr7B.!!$R1 640
5 TraesCS1D01G178600 chr6A 349933734 349934336 602 False 481.0 736 95.2800 1229 1869 2 chr6A.!!$F1 640

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
280 281 0.101399 CGCGGACTCAGCTCTATTGT 59.899 55.000 0.00 0.0 0.00 2.71 F
674 687 0.824109 TGGCATCGTAGCTAGCAGTT 59.176 50.000 18.83 0.0 34.17 3.16 F
1815 1880 2.045926 GACCGCCTCCATGCTTGT 60.046 61.111 0.00 0.0 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2258 2329 2.177394 TGCATTACAACCAGCGAGAA 57.823 45.0 0.0 0.0 0.0 2.87 R
2550 2635 0.039911 AGAGCAGGGAGGTTAGACGT 59.960 55.0 0.0 0.0 0.0 4.34 R
3641 3726 0.873054 CAGATCAATCATGGCCGAGC 59.127 55.0 0.0 0.0 0.0 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.934507 GCCTAAGAGCATGGTTAATAGTATAG 57.065 38.462 0.00 0.00 0.00 1.31
26 27 7.492994 GCCTAAGAGCATGGTTAATAGTATAGC 59.507 40.741 0.00 0.00 0.00 2.97
27 28 7.982354 CCTAAGAGCATGGTTAATAGTATAGCC 59.018 40.741 0.00 0.00 0.00 3.93
28 29 6.935240 AGAGCATGGTTAATAGTATAGCCA 57.065 37.500 0.00 3.65 39.96 4.75
29 30 6.940739 AGAGCATGGTTAATAGTATAGCCAG 58.059 40.000 0.00 2.11 39.18 4.85
30 31 5.491982 AGCATGGTTAATAGTATAGCCAGC 58.508 41.667 0.00 8.73 39.18 4.85
31 32 5.249393 AGCATGGTTAATAGTATAGCCAGCT 59.751 40.000 0.00 0.00 39.18 4.24
32 33 5.352569 GCATGGTTAATAGTATAGCCAGCTG 59.647 44.000 6.78 6.78 39.18 4.24
33 34 4.894784 TGGTTAATAGTATAGCCAGCTGC 58.105 43.478 8.66 3.91 41.71 5.25
55 56 2.654863 GGCTATAAACCAGTGCCATGT 58.345 47.619 0.00 0.00 42.79 3.21
56 57 2.618709 GGCTATAAACCAGTGCCATGTC 59.381 50.000 0.00 0.00 42.79 3.06
57 58 3.278574 GCTATAAACCAGTGCCATGTCA 58.721 45.455 0.00 0.00 0.00 3.58
58 59 3.694072 GCTATAAACCAGTGCCATGTCAA 59.306 43.478 0.00 0.00 0.00 3.18
59 60 4.438744 GCTATAAACCAGTGCCATGTCAAC 60.439 45.833 0.00 0.00 0.00 3.18
60 61 2.071778 AAACCAGTGCCATGTCAACT 57.928 45.000 0.00 0.00 0.00 3.16
61 62 2.949177 AACCAGTGCCATGTCAACTA 57.051 45.000 0.00 0.00 0.00 2.24
62 63 2.185004 ACCAGTGCCATGTCAACTAC 57.815 50.000 0.00 0.00 0.00 2.73
63 64 1.419762 ACCAGTGCCATGTCAACTACA 59.580 47.619 0.00 0.00 43.86 2.74
64 65 2.158682 ACCAGTGCCATGTCAACTACAA 60.159 45.455 0.00 0.00 42.70 2.41
65 66 2.226437 CCAGTGCCATGTCAACTACAAC 59.774 50.000 0.00 0.00 42.70 3.32
66 67 2.226437 CAGTGCCATGTCAACTACAACC 59.774 50.000 0.00 0.00 42.70 3.77
67 68 1.539827 GTGCCATGTCAACTACAACCC 59.460 52.381 0.00 0.00 42.70 4.11
68 69 1.143889 TGCCATGTCAACTACAACCCA 59.856 47.619 0.00 0.00 42.70 4.51
69 70 2.224992 TGCCATGTCAACTACAACCCAT 60.225 45.455 0.00 0.00 42.70 4.00
70 71 2.423538 GCCATGTCAACTACAACCCATC 59.576 50.000 0.00 0.00 42.70 3.51
71 72 3.016736 CCATGTCAACTACAACCCATCC 58.983 50.000 0.00 0.00 42.70 3.51
72 73 3.308402 CCATGTCAACTACAACCCATCCT 60.308 47.826 0.00 0.00 42.70 3.24
73 74 4.080582 CCATGTCAACTACAACCCATCCTA 60.081 45.833 0.00 0.00 42.70 2.94
74 75 5.397899 CCATGTCAACTACAACCCATCCTAT 60.398 44.000 0.00 0.00 42.70 2.57
75 76 6.183361 CCATGTCAACTACAACCCATCCTATA 60.183 42.308 0.00 0.00 42.70 1.31
76 77 6.479972 TGTCAACTACAACCCATCCTATAG 57.520 41.667 0.00 0.00 34.29 1.31
77 78 5.163343 TGTCAACTACAACCCATCCTATAGC 60.163 44.000 0.00 0.00 34.29 2.97
78 79 4.347000 TCAACTACAACCCATCCTATAGCC 59.653 45.833 0.00 0.00 0.00 3.93
79 80 3.936461 ACTACAACCCATCCTATAGCCA 58.064 45.455 0.00 0.00 0.00 4.75
80 81 4.303794 ACTACAACCCATCCTATAGCCAA 58.696 43.478 0.00 0.00 0.00 4.52
81 82 3.577805 ACAACCCATCCTATAGCCAAC 57.422 47.619 0.00 0.00 0.00 3.77
82 83 2.849943 ACAACCCATCCTATAGCCAACA 59.150 45.455 0.00 0.00 0.00 3.33
83 84 3.463329 ACAACCCATCCTATAGCCAACAT 59.537 43.478 0.00 0.00 0.00 2.71
84 85 3.795688 ACCCATCCTATAGCCAACATG 57.204 47.619 0.00 0.00 0.00 3.21
85 86 3.056080 ACCCATCCTATAGCCAACATGT 58.944 45.455 0.00 0.00 0.00 3.21
86 87 4.239495 ACCCATCCTATAGCCAACATGTA 58.761 43.478 0.00 0.00 0.00 2.29
87 88 4.852118 ACCCATCCTATAGCCAACATGTAT 59.148 41.667 0.00 0.00 0.00 2.29
88 89 6.029431 ACCCATCCTATAGCCAACATGTATA 58.971 40.000 0.00 0.00 0.00 1.47
89 90 6.503924 ACCCATCCTATAGCCAACATGTATAA 59.496 38.462 0.00 0.00 0.00 0.98
90 91 7.184570 ACCCATCCTATAGCCAACATGTATAAT 59.815 37.037 0.00 0.00 0.00 1.28
91 92 8.713971 CCCATCCTATAGCCAACATGTATAATA 58.286 37.037 0.00 0.00 0.00 0.98
92 93 9.770097 CCATCCTATAGCCAACATGTATAATAG 57.230 37.037 0.00 3.11 0.00 1.73
117 118 9.047947 AGTAGATCAAAAGGGTGTACTATTTCT 57.952 33.333 0.00 0.00 0.00 2.52
118 119 9.668497 GTAGATCAAAAGGGTGTACTATTTCTT 57.332 33.333 0.00 0.00 0.00 2.52
128 129 9.847224 AGGGTGTACTATTTCTTTATTATGTGG 57.153 33.333 0.00 0.00 0.00 4.17
129 130 8.565416 GGGTGTACTATTTCTTTATTATGTGGC 58.435 37.037 0.00 0.00 0.00 5.01
130 131 8.565416 GGTGTACTATTTCTTTATTATGTGGCC 58.435 37.037 0.00 0.00 0.00 5.36
131 132 8.565416 GTGTACTATTTCTTTATTATGTGGCCC 58.435 37.037 0.00 0.00 0.00 5.80
132 133 8.275758 TGTACTATTTCTTTATTATGTGGCCCA 58.724 33.333 0.00 0.00 0.00 5.36
133 134 7.582667 ACTATTTCTTTATTATGTGGCCCAC 57.417 36.000 7.01 7.01 34.56 4.61
143 144 2.307496 TGTGGCCCACATTTCATTCT 57.693 45.000 13.83 0.00 39.62 2.40
144 145 2.170166 TGTGGCCCACATTTCATTCTC 58.830 47.619 13.83 0.00 39.62 2.87
145 146 2.170166 GTGGCCCACATTTCATTCTCA 58.830 47.619 9.55 0.00 34.08 3.27
146 147 2.094545 GTGGCCCACATTTCATTCTCAC 60.095 50.000 9.55 0.00 34.08 3.51
147 148 2.170166 GGCCCACATTTCATTCTCACA 58.830 47.619 0.00 0.00 0.00 3.58
148 149 2.562298 GGCCCACATTTCATTCTCACAA 59.438 45.455 0.00 0.00 0.00 3.33
149 150 3.006752 GGCCCACATTTCATTCTCACAAA 59.993 43.478 0.00 0.00 0.00 2.83
150 151 4.240096 GCCCACATTTCATTCTCACAAAG 58.760 43.478 0.00 0.00 0.00 2.77
151 152 4.262164 GCCCACATTTCATTCTCACAAAGT 60.262 41.667 0.00 0.00 0.00 2.66
152 153 5.224888 CCCACATTTCATTCTCACAAAGTG 58.775 41.667 0.00 0.00 34.45 3.16
153 154 4.682860 CCACATTTCATTCTCACAAAGTGC 59.317 41.667 0.00 0.00 32.98 4.40
154 155 4.682860 CACATTTCATTCTCACAAAGTGCC 59.317 41.667 0.00 0.00 32.98 5.01
155 156 4.586001 ACATTTCATTCTCACAAAGTGCCT 59.414 37.500 0.00 0.00 32.98 4.75
156 157 5.769662 ACATTTCATTCTCACAAAGTGCCTA 59.230 36.000 0.00 0.00 32.98 3.93
157 158 5.947228 TTTCATTCTCACAAAGTGCCTAG 57.053 39.130 0.00 0.00 32.98 3.02
158 159 4.890158 TCATTCTCACAAAGTGCCTAGA 57.110 40.909 0.00 0.00 32.98 2.43
159 160 5.227569 TCATTCTCACAAAGTGCCTAGAA 57.772 39.130 0.00 3.33 31.74 2.10
160 161 5.240891 TCATTCTCACAAAGTGCCTAGAAG 58.759 41.667 0.00 1.19 31.08 2.85
161 162 3.045601 TCTCACAAAGTGCCTAGAAGC 57.954 47.619 0.00 0.00 32.98 3.86
162 163 2.368548 TCTCACAAAGTGCCTAGAAGCA 59.631 45.455 0.00 0.00 41.46 3.91
163 164 3.008375 TCTCACAAAGTGCCTAGAAGCAT 59.992 43.478 0.00 0.00 46.24 3.79
164 165 3.076621 TCACAAAGTGCCTAGAAGCATG 58.923 45.455 0.00 0.00 46.24 4.06
165 166 2.816087 CACAAAGTGCCTAGAAGCATGT 59.184 45.455 0.00 0.00 46.24 3.21
166 167 2.816087 ACAAAGTGCCTAGAAGCATGTG 59.184 45.455 0.00 0.00 46.24 3.21
167 168 1.457346 AAGTGCCTAGAAGCATGTGC 58.543 50.000 0.00 0.00 46.24 4.57
177 178 3.873883 GCATGTGCTCGAGCTGGC 61.874 66.667 35.27 27.11 42.66 4.85
178 179 2.125229 CATGTGCTCGAGCTGGCT 60.125 61.111 35.27 16.33 42.66 4.75
179 180 2.172372 CATGTGCTCGAGCTGGCTC 61.172 63.158 35.27 20.36 42.66 4.70
180 181 2.357575 ATGTGCTCGAGCTGGCTCT 61.358 57.895 35.27 13.27 42.66 4.09
181 182 1.897225 ATGTGCTCGAGCTGGCTCTT 61.897 55.000 35.27 16.15 42.66 2.85
182 183 1.809209 GTGCTCGAGCTGGCTCTTC 60.809 63.158 35.27 13.09 42.66 2.87
183 184 2.278330 TGCTCGAGCTGGCTCTTCA 61.278 57.895 35.27 11.55 42.66 3.02
184 185 1.809209 GCTCGAGCTGGCTCTTCAC 60.809 63.158 29.88 0.00 40.69 3.18
185 186 1.515952 CTCGAGCTGGCTCTTCACG 60.516 63.158 18.57 7.50 40.69 4.35
186 187 1.927608 CTCGAGCTGGCTCTTCACGA 61.928 60.000 18.57 10.98 40.69 4.35
187 188 1.080501 CGAGCTGGCTCTTCACGAA 60.081 57.895 18.57 0.00 40.69 3.85
188 189 1.075425 CGAGCTGGCTCTTCACGAAG 61.075 60.000 18.57 0.08 40.69 3.79
189 190 0.244994 GAGCTGGCTCTTCACGAAGA 59.755 55.000 14.51 9.08 44.47 2.87
195 196 2.261671 TCTTCACGAAGAGCCCGC 59.738 61.111 5.38 0.00 42.06 6.13
196 197 2.262915 CTTCACGAAGAGCCCGCT 59.737 61.111 0.20 0.00 40.79 5.52
197 198 1.374758 CTTCACGAAGAGCCCGCTT 60.375 57.895 0.20 0.00 40.79 4.68
198 199 0.108804 CTTCACGAAGAGCCCGCTTA 60.109 55.000 0.20 0.00 40.79 3.09
199 200 0.389426 TTCACGAAGAGCCCGCTTAC 60.389 55.000 0.00 0.00 0.00 2.34
200 201 1.810030 CACGAAGAGCCCGCTTACC 60.810 63.158 0.00 0.00 0.00 2.85
201 202 1.982938 ACGAAGAGCCCGCTTACCT 60.983 57.895 0.00 0.00 0.00 3.08
202 203 1.218316 CGAAGAGCCCGCTTACCTT 59.782 57.895 0.00 0.00 0.00 3.50
203 204 0.806492 CGAAGAGCCCGCTTACCTTC 60.806 60.000 6.57 6.57 0.00 3.46
204 205 0.537653 GAAGAGCCCGCTTACCTTCT 59.462 55.000 8.59 0.00 32.72 2.85
205 206 0.537653 AAGAGCCCGCTTACCTTCTC 59.462 55.000 0.00 0.00 0.00 2.87
206 207 0.324830 AGAGCCCGCTTACCTTCTCT 60.325 55.000 0.00 0.00 0.00 3.10
207 208 0.103390 GAGCCCGCTTACCTTCTCTC 59.897 60.000 0.00 0.00 0.00 3.20
208 209 1.144276 GCCCGCTTACCTTCTCTCC 59.856 63.158 0.00 0.00 0.00 3.71
209 210 1.331399 GCCCGCTTACCTTCTCTCCT 61.331 60.000 0.00 0.00 0.00 3.69
210 211 0.747852 CCCGCTTACCTTCTCTCCTC 59.252 60.000 0.00 0.00 0.00 3.71
211 212 1.686741 CCCGCTTACCTTCTCTCCTCT 60.687 57.143 0.00 0.00 0.00 3.69
212 213 2.104170 CCGCTTACCTTCTCTCCTCTT 58.896 52.381 0.00 0.00 0.00 2.85
213 214 2.100087 CCGCTTACCTTCTCTCCTCTTC 59.900 54.545 0.00 0.00 0.00 2.87
214 215 3.020984 CGCTTACCTTCTCTCCTCTTCT 58.979 50.000 0.00 0.00 0.00 2.85
215 216 3.066203 CGCTTACCTTCTCTCCTCTTCTC 59.934 52.174 0.00 0.00 0.00 2.87
216 217 4.278310 GCTTACCTTCTCTCCTCTTCTCT 58.722 47.826 0.00 0.00 0.00 3.10
217 218 4.709886 GCTTACCTTCTCTCCTCTTCTCTT 59.290 45.833 0.00 0.00 0.00 2.85
218 219 5.186992 GCTTACCTTCTCTCCTCTTCTCTTT 59.813 44.000 0.00 0.00 0.00 2.52
219 220 6.627287 GCTTACCTTCTCTCCTCTTCTCTTTC 60.627 46.154 0.00 0.00 0.00 2.62
220 221 4.093743 ACCTTCTCTCCTCTTCTCTTTCC 58.906 47.826 0.00 0.00 0.00 3.13
221 222 4.202781 ACCTTCTCTCCTCTTCTCTTTCCT 60.203 45.833 0.00 0.00 0.00 3.36
222 223 4.402474 CCTTCTCTCCTCTTCTCTTTCCTC 59.598 50.000 0.00 0.00 0.00 3.71
223 224 3.976015 TCTCTCCTCTTCTCTTTCCTCC 58.024 50.000 0.00 0.00 0.00 4.30
224 225 3.335183 TCTCTCCTCTTCTCTTTCCTCCA 59.665 47.826 0.00 0.00 0.00 3.86
225 226 4.093011 CTCTCCTCTTCTCTTTCCTCCAA 58.907 47.826 0.00 0.00 0.00 3.53
226 227 3.835395 TCTCCTCTTCTCTTTCCTCCAAC 59.165 47.826 0.00 0.00 0.00 3.77
227 228 3.837731 CTCCTCTTCTCTTTCCTCCAACT 59.162 47.826 0.00 0.00 0.00 3.16
228 229 5.011982 TCCTCTTCTCTTTCCTCCAACTA 57.988 43.478 0.00 0.00 0.00 2.24
229 230 5.403512 TCCTCTTCTCTTTCCTCCAACTAA 58.596 41.667 0.00 0.00 0.00 2.24
230 231 5.482175 TCCTCTTCTCTTTCCTCCAACTAAG 59.518 44.000 0.00 0.00 0.00 2.18
231 232 5.153950 TCTTCTCTTTCCTCCAACTAAGC 57.846 43.478 0.00 0.00 0.00 3.09
232 233 4.593206 TCTTCTCTTTCCTCCAACTAAGCA 59.407 41.667 0.00 0.00 0.00 3.91
233 234 4.543590 TCTCTTTCCTCCAACTAAGCAG 57.456 45.455 0.00 0.00 0.00 4.24
234 235 4.160329 TCTCTTTCCTCCAACTAAGCAGA 58.840 43.478 0.00 0.00 0.00 4.26
235 236 4.593206 TCTCTTTCCTCCAACTAAGCAGAA 59.407 41.667 0.00 0.00 0.00 3.02
236 237 5.071788 TCTCTTTCCTCCAACTAAGCAGAAA 59.928 40.000 0.00 0.00 0.00 2.52
237 238 5.880901 TCTTTCCTCCAACTAAGCAGAAAT 58.119 37.500 0.00 0.00 0.00 2.17
238 239 7.016153 TCTTTCCTCCAACTAAGCAGAAATA 57.984 36.000 0.00 0.00 0.00 1.40
239 240 7.633789 TCTTTCCTCCAACTAAGCAGAAATAT 58.366 34.615 0.00 0.00 0.00 1.28
240 241 8.768397 TCTTTCCTCCAACTAAGCAGAAATATA 58.232 33.333 0.00 0.00 0.00 0.86
241 242 8.732746 TTTCCTCCAACTAAGCAGAAATATAC 57.267 34.615 0.00 0.00 0.00 1.47
242 243 7.676683 TCCTCCAACTAAGCAGAAATATACT 57.323 36.000 0.00 0.00 0.00 2.12
243 244 8.777578 TCCTCCAACTAAGCAGAAATATACTA 57.222 34.615 0.00 0.00 0.00 1.82
244 245 9.209048 TCCTCCAACTAAGCAGAAATATACTAA 57.791 33.333 0.00 0.00 0.00 2.24
264 265 7.813852 ACTAATTTATTCCTTATAGCTCGCG 57.186 36.000 0.00 0.00 0.00 5.87
265 266 6.812160 ACTAATTTATTCCTTATAGCTCGCGG 59.188 38.462 6.13 0.00 0.00 6.46
266 267 4.859304 TTTATTCCTTATAGCTCGCGGA 57.141 40.909 6.13 0.00 0.00 5.54
267 268 2.726832 ATTCCTTATAGCTCGCGGAC 57.273 50.000 6.13 0.00 0.00 4.79
268 269 1.688772 TTCCTTATAGCTCGCGGACT 58.311 50.000 6.13 6.66 0.00 3.85
269 270 1.236628 TCCTTATAGCTCGCGGACTC 58.763 55.000 6.13 0.00 0.00 3.36
270 271 0.952280 CCTTATAGCTCGCGGACTCA 59.048 55.000 6.13 0.00 0.00 3.41
271 272 1.068885 CCTTATAGCTCGCGGACTCAG 60.069 57.143 6.13 0.00 0.00 3.35
272 273 0.311165 TTATAGCTCGCGGACTCAGC 59.689 55.000 6.13 7.57 0.00 4.26
273 274 0.535328 TATAGCTCGCGGACTCAGCT 60.535 55.000 20.94 20.94 45.59 4.24
274 275 1.791103 ATAGCTCGCGGACTCAGCTC 61.791 60.000 20.81 0.00 42.65 4.09
275 276 2.878089 TAGCTCGCGGACTCAGCTCT 62.878 60.000 20.81 3.46 42.65 4.09
276 277 2.473760 GCTCGCGGACTCAGCTCTA 61.474 63.158 6.13 0.00 0.00 2.43
277 278 1.791103 GCTCGCGGACTCAGCTCTAT 61.791 60.000 6.13 0.00 0.00 1.98
278 279 0.665835 CTCGCGGACTCAGCTCTATT 59.334 55.000 6.13 0.00 0.00 1.73
279 280 0.382158 TCGCGGACTCAGCTCTATTG 59.618 55.000 6.13 0.00 0.00 1.90
280 281 0.101399 CGCGGACTCAGCTCTATTGT 59.899 55.000 0.00 0.00 0.00 2.71
281 282 1.333931 CGCGGACTCAGCTCTATTGTA 59.666 52.381 0.00 0.00 0.00 2.41
282 283 2.733517 GCGGACTCAGCTCTATTGTAC 58.266 52.381 0.00 0.00 0.00 2.90
283 284 2.359531 GCGGACTCAGCTCTATTGTACT 59.640 50.000 0.00 0.00 0.00 2.73
284 285 3.549221 GCGGACTCAGCTCTATTGTACTC 60.549 52.174 0.00 0.00 0.00 2.59
285 286 3.303461 CGGACTCAGCTCTATTGTACTCG 60.303 52.174 0.00 0.00 0.00 4.18
286 287 3.549221 GGACTCAGCTCTATTGTACTCGC 60.549 52.174 0.00 0.00 0.00 5.03
287 288 3.283751 ACTCAGCTCTATTGTACTCGCT 58.716 45.455 0.00 0.00 0.00 4.93
506 519 7.653647 AGATACATTTTGTTTTGCCGAGTAAA 58.346 30.769 0.00 0.00 0.00 2.01
509 522 7.546778 ACATTTTGTTTTGCCGAGTAAAAAT 57.453 28.000 2.54 0.00 29.97 1.82
674 687 0.824109 TGGCATCGTAGCTAGCAGTT 59.176 50.000 18.83 0.00 34.17 3.16
741 787 2.277084 CCTTAACCCGTCCAAGATTCG 58.723 52.381 0.00 0.00 0.00 3.34
1227 1277 3.910490 GCGGATGAGGCGCTCTCT 61.910 66.667 21.36 5.96 42.86 3.10
1815 1880 2.045926 GACCGCCTCCATGCTTGT 60.046 61.111 0.00 0.00 0.00 3.16
1904 1972 2.362077 AGCTTTGTTCGGCATTCAACTT 59.638 40.909 0.00 0.00 0.00 2.66
2110 2180 2.224621 CGAATATGGGGATTGCTGAGGT 60.225 50.000 0.00 0.00 0.00 3.85
2258 2329 2.128771 AGCTGTGTCCTGTGTTGTTT 57.871 45.000 0.00 0.00 0.00 2.83
2365 2437 9.739276 ACTGTTGATTTCCTCTGTTTATGATAA 57.261 29.630 0.00 0.00 0.00 1.75
2400 2472 6.847792 GCTTGTTTACTTGTTTTACGGTACTC 59.152 38.462 0.00 0.00 0.00 2.59
2404 2476 7.649306 TGTTTACTTGTTTTACGGTACTCTCTC 59.351 37.037 0.00 0.00 0.00 3.20
2405 2477 5.131594 ACTTGTTTTACGGTACTCTCTCC 57.868 43.478 0.00 0.00 0.00 3.71
2452 2536 2.189594 TGGACAGTTGCTGATCAAGG 57.810 50.000 0.00 0.00 34.91 3.61
2546 2631 7.049754 GGATTTGCAATTTTGAATACATCCCT 58.950 34.615 0.00 0.00 0.00 4.20
2547 2632 7.225341 GGATTTGCAATTTTGAATACATCCCTC 59.775 37.037 0.00 0.00 0.00 4.30
2548 2633 6.855763 TTGCAATTTTGAATACATCCCTCT 57.144 33.333 0.00 0.00 0.00 3.69
2549 2634 7.953005 TTGCAATTTTGAATACATCCCTCTA 57.047 32.000 0.00 0.00 0.00 2.43
2550 2635 7.953005 TGCAATTTTGAATACATCCCTCTAA 57.047 32.000 0.00 0.00 0.00 2.10
2551 2636 7.771183 TGCAATTTTGAATACATCCCTCTAAC 58.229 34.615 0.00 0.00 0.00 2.34
2552 2637 6.912591 GCAATTTTGAATACATCCCTCTAACG 59.087 38.462 0.00 0.00 0.00 3.18
2747 2832 1.530323 TGGAGCTTTTTACGAAGGCC 58.470 50.000 0.00 0.00 0.00 5.19
2755 2840 4.149922 GCTTTTTACGAAGGCCATGAAAAC 59.850 41.667 5.01 0.00 0.00 2.43
2864 2949 2.633481 AGTGTACCCCAGTGTTCTTCTC 59.367 50.000 0.00 0.00 0.00 2.87
3098 3183 3.140325 TGCTTTAGGTCACCTCCTTTG 57.860 47.619 0.00 0.00 38.86 2.77
3104 3189 0.036875 GGTCACCTCCTTTGTCTGGG 59.963 60.000 0.00 0.00 0.00 4.45
3196 3281 8.754080 TCCTAGAAAAATCTCCTCTACTCTTTG 58.246 37.037 0.00 0.00 0.00 2.77
3279 3364 8.049117 AGTGCTGTGAAAGAATCTATTAATGGA 58.951 33.333 3.78 3.78 0.00 3.41
3394 3479 5.960988 TCTGTCCAGATGATACCTGCAAGG 61.961 50.000 0.00 0.00 46.92 3.61
3614 3699 7.246027 AGACACTTAAGGGTAAAATTGGGATT 58.754 34.615 11.16 0.00 0.00 3.01
3615 3700 7.733047 AGACACTTAAGGGTAAAATTGGGATTT 59.267 33.333 11.16 0.00 37.06 2.17
3641 3726 6.730960 TTTTCAGGTTAGTATTACGCCTTG 57.269 37.500 5.35 0.00 0.00 3.61
3646 3731 2.787601 TAGTATTACGCCTTGCTCGG 57.212 50.000 0.00 0.00 0.00 4.63
3677 3762 4.641094 TGATCTGTCATGTATGCAATGCAA 59.359 37.500 13.45 0.00 43.73 4.08
3682 3767 4.178540 GTCATGTATGCAATGCAAGCTTT 58.821 39.130 13.45 0.00 43.73 3.51
3688 3773 7.062906 TGTATGCAATGCAAGCTTTTTAATG 57.937 32.000 13.45 0.00 43.62 1.90
3711 3796 5.304101 TGTTTCTTGACCATTTGTTGCCTAT 59.696 36.000 0.00 0.00 0.00 2.57
3713 3798 6.509418 TTCTTGACCATTTGTTGCCTATAC 57.491 37.500 0.00 0.00 0.00 1.47
3714 3799 5.565509 TCTTGACCATTTGTTGCCTATACA 58.434 37.500 0.00 0.00 0.00 2.29
3715 3800 6.186957 TCTTGACCATTTGTTGCCTATACAT 58.813 36.000 0.00 0.00 0.00 2.29
3791 3876 8.407064 TGGTACTTGTAACACCTTTAAATGTTG 58.593 33.333 14.61 4.06 39.36 3.33
3842 3929 6.237901 TCCCTCCAATCCATATTAATTGTCG 58.762 40.000 0.00 0.00 32.20 4.35
3843 3930 5.106157 CCCTCCAATCCATATTAATTGTCGC 60.106 44.000 0.00 0.00 32.20 5.19
3844 3931 5.707298 CCTCCAATCCATATTAATTGTCGCT 59.293 40.000 0.00 0.00 32.20 4.93
3845 3932 6.348786 CCTCCAATCCATATTAATTGTCGCTG 60.349 42.308 0.00 0.00 32.20 5.18
3846 3933 6.295249 TCCAATCCATATTAATTGTCGCTGA 58.705 36.000 0.00 0.00 32.20 4.26
3847 3934 6.942005 TCCAATCCATATTAATTGTCGCTGAT 59.058 34.615 0.00 0.00 32.20 2.90
3848 3935 7.448161 TCCAATCCATATTAATTGTCGCTGATT 59.552 33.333 0.00 0.00 32.20 2.57
3849 3936 8.084073 CCAATCCATATTAATTGTCGCTGATTT 58.916 33.333 0.00 0.00 32.20 2.17
3853 3940 8.946085 TCCATATTAATTGTCGCTGATTTATCC 58.054 33.333 0.00 0.00 0.00 2.59
3854 3941 7.904977 CCATATTAATTGTCGCTGATTTATCCG 59.095 37.037 0.00 0.00 0.00 4.18
3855 3942 6.861065 ATTAATTGTCGCTGATTTATCCGT 57.139 33.333 0.00 0.00 0.00 4.69
3856 3943 7.956420 ATTAATTGTCGCTGATTTATCCGTA 57.044 32.000 0.00 0.00 0.00 4.02
3857 3944 7.956420 TTAATTGTCGCTGATTTATCCGTAT 57.044 32.000 0.00 0.00 0.00 3.06
3858 3945 6.861065 AATTGTCGCTGATTTATCCGTATT 57.139 33.333 0.00 0.00 0.00 1.89
3859 3946 7.956420 AATTGTCGCTGATTTATCCGTATTA 57.044 32.000 0.00 0.00 0.00 0.98
3860 3947 7.956420 ATTGTCGCTGATTTATCCGTATTAA 57.044 32.000 0.00 0.00 0.00 1.40
3861 3948 7.956420 TTGTCGCTGATTTATCCGTATTAAT 57.044 32.000 0.00 0.00 0.00 1.40
3862 3949 7.956420 TGTCGCTGATTTATCCGTATTAATT 57.044 32.000 0.00 0.00 0.00 1.40
3863 3950 7.792925 TGTCGCTGATTTATCCGTATTAATTG 58.207 34.615 0.00 0.00 0.00 2.32
3864 3951 7.439955 TGTCGCTGATTTATCCGTATTAATTGT 59.560 33.333 0.00 0.00 0.00 2.71
3865 3952 8.280497 GTCGCTGATTTATCCGTATTAATTGTT 58.720 33.333 0.00 0.00 0.00 2.83
3916 4003 4.929211 TCAGCGACAATTAATATGGATCGG 59.071 41.667 0.00 0.00 0.00 4.18
4051 4205 2.783275 CTCTGTGCTGCATGCGAC 59.217 61.111 14.09 10.13 46.63 5.19
4053 4207 1.366854 CTCTGTGCTGCATGCGACAT 61.367 55.000 14.09 0.00 46.63 3.06
4067 4221 3.651206 TGCGACATTTTGACAATTGCAT 58.349 36.364 5.05 0.00 0.00 3.96
4069 4223 4.150274 TGCGACATTTTGACAATTGCATTC 59.850 37.500 5.05 0.00 0.00 2.67
4070 4224 4.150274 GCGACATTTTGACAATTGCATTCA 59.850 37.500 5.05 0.00 0.00 2.57
4071 4225 5.666913 GCGACATTTTGACAATTGCATTCAG 60.667 40.000 5.05 0.00 0.00 3.02
4072 4226 5.630264 CGACATTTTGACAATTGCATTCAGA 59.370 36.000 5.05 0.00 0.00 3.27
4086 4240 4.038282 TGCATTCAGACAGTTGCATCTTTT 59.962 37.500 0.00 0.00 39.98 2.27
4112 4266 7.921786 TTCCTGTTCACTTATTCATAGTTGG 57.078 36.000 0.00 0.00 0.00 3.77
4113 4267 7.016153 TCCTGTTCACTTATTCATAGTTGGT 57.984 36.000 0.00 0.00 0.00 3.67
4114 4268 7.458397 TCCTGTTCACTTATTCATAGTTGGTT 58.542 34.615 0.00 0.00 0.00 3.67
4115 4269 7.390440 TCCTGTTCACTTATTCATAGTTGGTTG 59.610 37.037 0.00 0.00 0.00 3.77
4116 4270 7.390440 CCTGTTCACTTATTCATAGTTGGTTGA 59.610 37.037 0.00 0.00 0.00 3.18
4117 4271 8.094798 TGTTCACTTATTCATAGTTGGTTGAC 57.905 34.615 0.00 0.00 0.00 3.18
4118 4272 7.717436 TGTTCACTTATTCATAGTTGGTTGACA 59.283 33.333 0.00 0.00 0.00 3.58
4119 4273 8.564574 GTTCACTTATTCATAGTTGGTTGACAA 58.435 33.333 0.00 0.00 36.54 3.18
4120 4274 8.684386 TCACTTATTCATAGTTGGTTGACAAA 57.316 30.769 0.00 0.00 41.58 2.83
4121 4275 9.295825 TCACTTATTCATAGTTGGTTGACAAAT 57.704 29.630 0.00 0.00 41.58 2.32
4122 4276 9.559958 CACTTATTCATAGTTGGTTGACAAATC 57.440 33.333 0.00 0.00 41.58 2.17
4123 4277 8.450964 ACTTATTCATAGTTGGTTGACAAATCG 58.549 33.333 0.00 0.00 41.58 3.34
4124 4278 5.621197 TTCATAGTTGGTTGACAAATCGG 57.379 39.130 0.00 0.00 41.58 4.18
4125 4279 4.006989 TCATAGTTGGTTGACAAATCGGG 58.993 43.478 0.00 0.00 41.58 5.14
4126 4280 2.358322 AGTTGGTTGACAAATCGGGT 57.642 45.000 0.00 0.00 41.58 5.28
4127 4281 2.227194 AGTTGGTTGACAAATCGGGTC 58.773 47.619 0.00 0.00 41.58 4.46
4128 4282 1.950909 GTTGGTTGACAAATCGGGTCA 59.049 47.619 0.00 0.00 43.12 4.02
4129 4283 1.890876 TGGTTGACAAATCGGGTCAG 58.109 50.000 0.00 0.00 45.20 3.51
4130 4284 1.418264 TGGTTGACAAATCGGGTCAGA 59.582 47.619 0.00 0.00 45.20 3.27
4131 4285 2.158740 TGGTTGACAAATCGGGTCAGAA 60.159 45.455 0.00 0.00 45.20 3.02
4132 4286 2.225727 GGTTGACAAATCGGGTCAGAAC 59.774 50.000 0.00 0.00 45.20 3.01
4133 4287 2.875933 GTTGACAAATCGGGTCAGAACA 59.124 45.455 0.00 0.00 45.20 3.18
4134 4288 2.766313 TGACAAATCGGGTCAGAACAG 58.234 47.619 0.00 0.00 40.16 3.16
4135 4289 2.104111 TGACAAATCGGGTCAGAACAGT 59.896 45.455 0.00 0.00 40.16 3.55
4136 4290 2.480419 GACAAATCGGGTCAGAACAGTG 59.520 50.000 0.00 0.00 35.36 3.66
4137 4291 2.158813 ACAAATCGGGTCAGAACAGTGT 60.159 45.455 0.00 0.00 0.00 3.55
4138 4292 2.169832 AATCGGGTCAGAACAGTGTG 57.830 50.000 0.00 0.00 0.00 3.82
4139 4293 1.048601 ATCGGGTCAGAACAGTGTGT 58.951 50.000 0.00 0.00 0.00 3.72
4140 4294 1.694844 TCGGGTCAGAACAGTGTGTA 58.305 50.000 0.00 0.00 0.00 2.90
4141 4295 2.033372 TCGGGTCAGAACAGTGTGTAA 58.967 47.619 0.00 0.00 0.00 2.41
4142 4296 2.431419 TCGGGTCAGAACAGTGTGTAAA 59.569 45.455 0.00 0.00 0.00 2.01
4143 4297 2.542595 CGGGTCAGAACAGTGTGTAAAC 59.457 50.000 0.00 0.00 0.00 2.01
4144 4298 3.537580 GGGTCAGAACAGTGTGTAAACA 58.462 45.455 0.00 0.00 0.00 2.83
4145 4299 3.560068 GGGTCAGAACAGTGTGTAAACAG 59.440 47.826 0.00 0.00 0.00 3.16
4146 4300 4.189231 GGTCAGAACAGTGTGTAAACAGT 58.811 43.478 0.00 0.00 0.00 3.55
4147 4301 5.353938 GGTCAGAACAGTGTGTAAACAGTA 58.646 41.667 0.00 0.00 0.00 2.74
4148 4302 5.813672 GGTCAGAACAGTGTGTAAACAGTAA 59.186 40.000 0.00 0.00 0.00 2.24
4149 4303 6.314400 GGTCAGAACAGTGTGTAAACAGTAAA 59.686 38.462 0.00 0.00 0.00 2.01
4150 4304 7.178074 GTCAGAACAGTGTGTAAACAGTAAAC 58.822 38.462 0.00 0.00 0.00 2.01
4151 4305 7.064253 GTCAGAACAGTGTGTAAACAGTAAACT 59.936 37.037 0.00 0.00 0.00 2.66
4152 4306 7.604927 TCAGAACAGTGTGTAAACAGTAAACTT 59.395 33.333 0.00 0.00 0.00 2.66
4153 4307 8.234546 CAGAACAGTGTGTAAACAGTAAACTTT 58.765 33.333 0.00 0.00 0.00 2.66
4154 4308 8.789762 AGAACAGTGTGTAAACAGTAAACTTTT 58.210 29.630 0.00 0.00 0.00 2.27
4155 4309 9.401873 GAACAGTGTGTAAACAGTAAACTTTTT 57.598 29.630 0.00 0.46 31.59 1.94
4178 4332 9.936759 TTTTTACAGACCTTGAATTTGTCTTTT 57.063 25.926 0.00 0.00 37.25 2.27
4179 4333 9.936759 TTTTACAGACCTTGAATTTGTCTTTTT 57.063 25.926 0.00 0.00 37.25 1.94
4197 4351 3.407424 TTTTGCTGAGAGCTGCTTAGA 57.593 42.857 2.53 0.00 42.97 2.10
4198 4352 3.623906 TTTGCTGAGAGCTGCTTAGAT 57.376 42.857 2.53 0.00 42.97 1.98
4199 4353 2.598686 TGCTGAGAGCTGCTTAGATG 57.401 50.000 2.53 0.00 42.97 2.90
4200 4354 1.829849 TGCTGAGAGCTGCTTAGATGT 59.170 47.619 2.53 0.00 42.97 3.06
4201 4355 2.159128 TGCTGAGAGCTGCTTAGATGTC 60.159 50.000 2.53 0.00 42.97 3.06
4202 4356 2.802774 GCTGAGAGCTGCTTAGATGTCC 60.803 54.545 2.53 0.00 38.45 4.02
4203 4357 2.429971 CTGAGAGCTGCTTAGATGTCCA 59.570 50.000 2.53 0.00 32.19 4.02
4204 4358 2.833943 TGAGAGCTGCTTAGATGTCCAA 59.166 45.455 2.53 0.00 0.00 3.53
4205 4359 3.261643 TGAGAGCTGCTTAGATGTCCAAA 59.738 43.478 2.53 0.00 0.00 3.28
4206 4360 4.080695 TGAGAGCTGCTTAGATGTCCAAAT 60.081 41.667 2.53 0.00 0.00 2.32
4207 4361 4.197750 AGAGCTGCTTAGATGTCCAAATG 58.802 43.478 2.53 0.00 0.00 2.32
4208 4362 4.080695 AGAGCTGCTTAGATGTCCAAATGA 60.081 41.667 2.53 0.00 0.00 2.57
4209 4363 4.197750 AGCTGCTTAGATGTCCAAATGAG 58.802 43.478 0.00 0.00 0.00 2.90
4210 4364 3.944015 GCTGCTTAGATGTCCAAATGAGT 59.056 43.478 0.00 0.00 0.00 3.41
4211 4365 4.397417 GCTGCTTAGATGTCCAAATGAGTT 59.603 41.667 0.00 0.00 0.00 3.01
4212 4366 5.675575 GCTGCTTAGATGTCCAAATGAGTTG 60.676 44.000 0.00 0.00 36.94 3.16
4213 4367 5.559770 TGCTTAGATGTCCAAATGAGTTGA 58.440 37.500 0.00 0.00 39.87 3.18
4214 4368 6.003326 TGCTTAGATGTCCAAATGAGTTGAA 58.997 36.000 0.00 0.00 39.87 2.69
4215 4369 6.489700 TGCTTAGATGTCCAAATGAGTTGAAA 59.510 34.615 0.00 0.00 39.87 2.69
4216 4370 7.177216 TGCTTAGATGTCCAAATGAGTTGAAAT 59.823 33.333 0.00 0.00 39.87 2.17
4217 4371 8.031277 GCTTAGATGTCCAAATGAGTTGAAATT 58.969 33.333 0.00 0.00 39.87 1.82
4218 4372 9.918630 CTTAGATGTCCAAATGAGTTGAAATTT 57.081 29.630 0.00 0.00 39.87 1.82
4219 4373 9.695526 TTAGATGTCCAAATGAGTTGAAATTTG 57.304 29.630 0.00 0.00 41.41 2.32
4224 4378 5.505165 CAAATGAGTTGAAATTTGGAGCG 57.495 39.130 0.00 0.00 39.87 5.03
4225 4379 3.855689 ATGAGTTGAAATTTGGAGCGG 57.144 42.857 0.00 0.00 0.00 5.52
4226 4380 2.857483 TGAGTTGAAATTTGGAGCGGA 58.143 42.857 0.00 0.00 0.00 5.54
4227 4381 2.552315 TGAGTTGAAATTTGGAGCGGAC 59.448 45.455 0.00 0.00 0.00 4.79
4228 4382 1.886542 AGTTGAAATTTGGAGCGGACC 59.113 47.619 0.00 0.00 0.00 4.46
4229 4383 1.886542 GTTGAAATTTGGAGCGGACCT 59.113 47.619 0.00 0.00 0.00 3.85
4230 4384 1.821216 TGAAATTTGGAGCGGACCTC 58.179 50.000 0.00 0.00 39.98 3.85
4231 4385 1.073125 TGAAATTTGGAGCGGACCTCA 59.927 47.619 0.00 0.00 42.62 3.86
4232 4386 1.468914 GAAATTTGGAGCGGACCTCAC 59.531 52.381 0.00 0.00 42.62 3.51
4233 4387 0.673644 AATTTGGAGCGGACCTCACG 60.674 55.000 0.00 0.00 42.62 4.35
4240 4394 4.277239 CGGACCTCACGCATCAAA 57.723 55.556 0.00 0.00 0.00 2.69
4241 4395 2.767536 CGGACCTCACGCATCAAAT 58.232 52.632 0.00 0.00 0.00 2.32
4242 4396 1.086696 CGGACCTCACGCATCAAATT 58.913 50.000 0.00 0.00 0.00 1.82
4243 4397 2.276201 CGGACCTCACGCATCAAATTA 58.724 47.619 0.00 0.00 0.00 1.40
4244 4398 2.872245 CGGACCTCACGCATCAAATTAT 59.128 45.455 0.00 0.00 0.00 1.28
4245 4399 3.059597 CGGACCTCACGCATCAAATTATC 60.060 47.826 0.00 0.00 0.00 1.75
4246 4400 4.130118 GGACCTCACGCATCAAATTATCT 58.870 43.478 0.00 0.00 0.00 1.98
4247 4401 5.297547 GGACCTCACGCATCAAATTATCTA 58.702 41.667 0.00 0.00 0.00 1.98
4248 4402 5.177696 GGACCTCACGCATCAAATTATCTAC 59.822 44.000 0.00 0.00 0.00 2.59
4249 4403 5.057149 ACCTCACGCATCAAATTATCTACC 58.943 41.667 0.00 0.00 0.00 3.18
4250 4404 5.056480 CCTCACGCATCAAATTATCTACCA 58.944 41.667 0.00 0.00 0.00 3.25
4251 4405 5.050091 CCTCACGCATCAAATTATCTACCAC 60.050 44.000 0.00 0.00 0.00 4.16
4252 4406 5.423886 TCACGCATCAAATTATCTACCACA 58.576 37.500 0.00 0.00 0.00 4.17
4253 4407 5.293324 TCACGCATCAAATTATCTACCACAC 59.707 40.000 0.00 0.00 0.00 3.82
4254 4408 5.064579 CACGCATCAAATTATCTACCACACA 59.935 40.000 0.00 0.00 0.00 3.72
4255 4409 5.645929 ACGCATCAAATTATCTACCACACAA 59.354 36.000 0.00 0.00 0.00 3.33
4256 4410 6.150307 ACGCATCAAATTATCTACCACACAAA 59.850 34.615 0.00 0.00 0.00 2.83
4257 4411 7.026562 CGCATCAAATTATCTACCACACAAAA 58.973 34.615 0.00 0.00 0.00 2.44
4258 4412 7.540400 CGCATCAAATTATCTACCACACAAAAA 59.460 33.333 0.00 0.00 0.00 1.94
4319 4473 1.654220 TTTTTCTGAGCGCTGGTGC 59.346 52.632 18.48 0.00 0.00 5.01
4320 4474 1.100463 TTTTTCTGAGCGCTGGTGCA 61.100 50.000 18.48 5.27 39.64 4.57
4321 4475 1.509644 TTTTCTGAGCGCTGGTGCAG 61.510 55.000 18.48 16.70 39.64 4.41
4322 4476 2.381838 TTTCTGAGCGCTGGTGCAGA 62.382 55.000 18.48 19.04 39.64 4.26
4323 4477 2.125229 CTGAGCGCTGGTGCAGAT 60.125 61.111 18.48 0.00 39.64 2.90
4324 4478 2.435410 TGAGCGCTGGTGCAGATG 60.435 61.111 18.48 0.00 39.64 2.90
4325 4479 2.125391 GAGCGCTGGTGCAGATGA 60.125 61.111 18.48 0.00 39.64 2.92
4326 4480 2.125229 AGCGCTGGTGCAGATGAG 60.125 61.111 10.39 0.00 39.64 2.90
4327 4481 3.873883 GCGCTGGTGCAGATGAGC 61.874 66.667 0.00 0.00 39.64 4.26
4328 4482 3.200593 CGCTGGTGCAGATGAGCC 61.201 66.667 0.00 0.00 39.64 4.70
4329 4483 2.827642 GCTGGTGCAGATGAGCCC 60.828 66.667 0.00 0.00 39.41 5.19
4330 4484 2.513204 CTGGTGCAGATGAGCCCG 60.513 66.667 0.00 0.00 32.44 6.13
4331 4485 4.100084 TGGTGCAGATGAGCCCGG 62.100 66.667 0.00 0.00 0.00 5.73
4332 4486 4.864334 GGTGCAGATGAGCCCGGG 62.864 72.222 19.09 19.09 0.00 5.73
4333 4487 3.785859 GTGCAGATGAGCCCGGGA 61.786 66.667 29.31 2.74 0.00 5.14
4334 4488 3.473647 TGCAGATGAGCCCGGGAG 61.474 66.667 29.31 0.00 0.00 4.30
4335 4489 4.925861 GCAGATGAGCCCGGGAGC 62.926 72.222 29.31 16.09 0.00 4.70
4336 4490 3.473647 CAGATGAGCCCGGGAGCA 61.474 66.667 29.31 21.92 34.23 4.26
4337 4491 3.160047 AGATGAGCCCGGGAGCAG 61.160 66.667 29.31 0.00 34.23 4.24
4338 4492 3.157252 GATGAGCCCGGGAGCAGA 61.157 66.667 29.31 1.97 34.23 4.26
4339 4493 2.688666 ATGAGCCCGGGAGCAGAA 60.689 61.111 29.31 2.41 34.23 3.02
4340 4494 2.257409 GATGAGCCCGGGAGCAGAAA 62.257 60.000 29.31 1.13 34.23 2.52
4341 4495 2.436824 GAGCCCGGGAGCAGAAAC 60.437 66.667 29.31 2.84 34.23 2.78
4342 4496 2.930562 AGCCCGGGAGCAGAAACT 60.931 61.111 29.31 5.79 34.23 2.66
4343 4497 2.436824 GCCCGGGAGCAGAAACTC 60.437 66.667 29.31 0.00 35.86 3.01
4348 4502 4.625800 GGAGCAGAAACTCCGCAT 57.374 55.556 0.00 0.00 46.52 4.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.492994 GCTATACTATTAACCATGCTCTTAGGC 59.507 40.741 0.00 0.00 0.00 3.93
1 2 7.982354 GGCTATACTATTAACCATGCTCTTAGG 59.018 40.741 0.00 0.00 0.00 2.69
2 3 8.531982 TGGCTATACTATTAACCATGCTCTTAG 58.468 37.037 0.00 0.00 0.00 2.18
3 4 8.430573 TGGCTATACTATTAACCATGCTCTTA 57.569 34.615 0.00 0.00 0.00 2.10
4 5 7.316393 TGGCTATACTATTAACCATGCTCTT 57.684 36.000 0.00 0.00 0.00 2.85
5 6 6.575254 GCTGGCTATACTATTAACCATGCTCT 60.575 42.308 0.00 0.00 0.00 4.09
6 7 5.582665 GCTGGCTATACTATTAACCATGCTC 59.417 44.000 0.00 0.00 0.00 4.26
7 8 5.249393 AGCTGGCTATACTATTAACCATGCT 59.751 40.000 0.00 0.00 31.38 3.79
8 9 5.352569 CAGCTGGCTATACTATTAACCATGC 59.647 44.000 5.57 0.00 0.00 4.06
9 10 5.352569 GCAGCTGGCTATACTATTAACCATG 59.647 44.000 17.12 0.00 40.25 3.66
10 11 5.491982 GCAGCTGGCTATACTATTAACCAT 58.508 41.667 17.12 0.00 40.25 3.55
11 12 4.894784 GCAGCTGGCTATACTATTAACCA 58.105 43.478 17.12 0.00 40.25 3.67
35 36 2.618709 GACATGGCACTGGTTTATAGCC 59.381 50.000 0.00 0.00 45.41 3.93
36 37 3.278574 TGACATGGCACTGGTTTATAGC 58.721 45.455 0.00 0.00 0.00 2.97
37 38 4.943705 AGTTGACATGGCACTGGTTTATAG 59.056 41.667 0.00 0.00 0.00 1.31
38 39 4.917385 AGTTGACATGGCACTGGTTTATA 58.083 39.130 0.00 0.00 0.00 0.98
39 40 3.766545 AGTTGACATGGCACTGGTTTAT 58.233 40.909 0.00 0.00 0.00 1.40
40 41 3.222173 AGTTGACATGGCACTGGTTTA 57.778 42.857 0.00 0.00 0.00 2.01
41 42 2.071778 AGTTGACATGGCACTGGTTT 57.928 45.000 0.00 0.00 0.00 3.27
42 43 2.158682 TGTAGTTGACATGGCACTGGTT 60.159 45.455 0.00 0.00 31.20 3.67
43 44 1.419762 TGTAGTTGACATGGCACTGGT 59.580 47.619 0.00 0.00 31.20 4.00
44 45 2.183478 TGTAGTTGACATGGCACTGG 57.817 50.000 0.00 0.00 31.20 4.00
45 46 2.226437 GGTTGTAGTTGACATGGCACTG 59.774 50.000 0.00 0.00 38.07 3.66
46 47 2.504367 GGTTGTAGTTGACATGGCACT 58.496 47.619 0.00 4.67 38.07 4.40
47 48 1.539827 GGGTTGTAGTTGACATGGCAC 59.460 52.381 0.00 0.00 38.07 5.01
48 49 1.143889 TGGGTTGTAGTTGACATGGCA 59.856 47.619 0.00 0.00 38.07 4.92
49 50 1.904287 TGGGTTGTAGTTGACATGGC 58.096 50.000 0.00 0.00 38.07 4.40
50 51 3.016736 GGATGGGTTGTAGTTGACATGG 58.983 50.000 0.00 0.00 38.07 3.66
51 52 3.955471 AGGATGGGTTGTAGTTGACATG 58.045 45.455 0.00 0.00 38.07 3.21
52 53 5.975988 ATAGGATGGGTTGTAGTTGACAT 57.024 39.130 0.00 0.00 38.07 3.06
53 54 5.163343 GCTATAGGATGGGTTGTAGTTGACA 60.163 44.000 1.04 0.00 35.78 3.58
54 55 5.298347 GCTATAGGATGGGTTGTAGTTGAC 58.702 45.833 1.04 0.00 0.00 3.18
55 56 4.347000 GGCTATAGGATGGGTTGTAGTTGA 59.653 45.833 1.04 0.00 0.00 3.18
56 57 4.102524 TGGCTATAGGATGGGTTGTAGTTG 59.897 45.833 1.04 0.00 0.00 3.16
57 58 4.303794 TGGCTATAGGATGGGTTGTAGTT 58.696 43.478 1.04 0.00 0.00 2.24
58 59 3.936461 TGGCTATAGGATGGGTTGTAGT 58.064 45.455 1.04 0.00 0.00 2.73
59 60 4.102524 TGTTGGCTATAGGATGGGTTGTAG 59.897 45.833 1.04 0.00 0.00 2.74
60 61 4.041464 TGTTGGCTATAGGATGGGTTGTA 58.959 43.478 1.04 0.00 0.00 2.41
61 62 2.849943 TGTTGGCTATAGGATGGGTTGT 59.150 45.455 1.04 0.00 0.00 3.32
62 63 3.576078 TGTTGGCTATAGGATGGGTTG 57.424 47.619 1.04 0.00 0.00 3.77
63 64 3.463329 ACATGTTGGCTATAGGATGGGTT 59.537 43.478 1.04 0.00 0.00 4.11
64 65 3.056080 ACATGTTGGCTATAGGATGGGT 58.944 45.455 1.04 0.00 0.00 4.51
65 66 3.795688 ACATGTTGGCTATAGGATGGG 57.204 47.619 1.04 0.00 0.00 4.00
66 67 9.770097 CTATTATACATGTTGGCTATAGGATGG 57.230 37.037 2.30 0.00 0.00 3.51
91 92 9.047947 AGAAATAGTACACCCTTTTGATCTACT 57.952 33.333 0.00 0.00 0.00 2.57
92 93 9.668497 AAGAAATAGTACACCCTTTTGATCTAC 57.332 33.333 0.00 0.00 0.00 2.59
102 103 9.847224 CCACATAATAAAGAAATAGTACACCCT 57.153 33.333 0.00 0.00 0.00 4.34
103 104 8.565416 GCCACATAATAAAGAAATAGTACACCC 58.435 37.037 0.00 0.00 0.00 4.61
104 105 8.565416 GGCCACATAATAAAGAAATAGTACACC 58.435 37.037 0.00 0.00 0.00 4.16
105 106 8.565416 GGGCCACATAATAAAGAAATAGTACAC 58.435 37.037 4.39 0.00 0.00 2.90
106 107 8.275758 TGGGCCACATAATAAAGAAATAGTACA 58.724 33.333 0.00 0.00 0.00 2.90
107 108 8.565416 GTGGGCCACATAATAAAGAAATAGTAC 58.435 37.037 31.26 0.00 34.08 2.73
108 109 8.275758 TGTGGGCCACATAATAAAGAAATAGTA 58.724 33.333 34.67 5.88 39.62 1.82
109 110 7.122715 TGTGGGCCACATAATAAAGAAATAGT 58.877 34.615 34.67 0.00 39.62 2.12
110 111 7.581213 TGTGGGCCACATAATAAAGAAATAG 57.419 36.000 34.67 0.00 39.62 1.73
125 126 2.094545 GTGAGAATGAAATGTGGGCCAC 60.095 50.000 29.75 29.75 34.56 5.01
126 127 2.170166 GTGAGAATGAAATGTGGGCCA 58.830 47.619 0.00 0.00 0.00 5.36
127 128 2.170166 TGTGAGAATGAAATGTGGGCC 58.830 47.619 0.00 0.00 0.00 5.80
128 129 3.940209 TTGTGAGAATGAAATGTGGGC 57.060 42.857 0.00 0.00 0.00 5.36
129 130 5.224888 CACTTTGTGAGAATGAAATGTGGG 58.775 41.667 0.00 0.00 35.23 4.61
130 131 4.682860 GCACTTTGTGAGAATGAAATGTGG 59.317 41.667 1.52 0.00 35.23 4.17
131 132 4.682860 GGCACTTTGTGAGAATGAAATGTG 59.317 41.667 1.52 0.00 35.23 3.21
132 133 4.586001 AGGCACTTTGTGAGAATGAAATGT 59.414 37.500 1.52 0.00 35.23 2.71
133 134 5.130292 AGGCACTTTGTGAGAATGAAATG 57.870 39.130 1.52 0.00 35.23 2.32
134 135 6.240894 TCTAGGCACTTTGTGAGAATGAAAT 58.759 36.000 1.52 0.00 41.75 2.17
135 136 5.620206 TCTAGGCACTTTGTGAGAATGAAA 58.380 37.500 1.52 0.00 41.75 2.69
136 137 5.227569 TCTAGGCACTTTGTGAGAATGAA 57.772 39.130 1.52 0.00 41.75 2.57
137 138 4.890158 TCTAGGCACTTTGTGAGAATGA 57.110 40.909 1.52 0.00 41.75 2.57
138 139 4.142730 GCTTCTAGGCACTTTGTGAGAATG 60.143 45.833 1.52 0.00 41.75 2.67
139 140 4.006319 GCTTCTAGGCACTTTGTGAGAAT 58.994 43.478 1.52 0.00 41.75 2.40
140 141 3.181455 TGCTTCTAGGCACTTTGTGAGAA 60.181 43.478 1.52 1.87 41.75 2.87
141 142 2.368548 TGCTTCTAGGCACTTTGTGAGA 59.631 45.455 1.52 0.00 41.75 3.27
142 143 2.771089 TGCTTCTAGGCACTTTGTGAG 58.229 47.619 1.52 0.00 41.75 3.51
143 144 2.928801 TGCTTCTAGGCACTTTGTGA 57.071 45.000 1.52 0.00 41.75 3.58
144 145 2.816087 ACATGCTTCTAGGCACTTTGTG 59.184 45.455 0.00 0.00 45.36 3.33
145 146 2.816087 CACATGCTTCTAGGCACTTTGT 59.184 45.455 0.00 0.00 45.36 2.83
146 147 2.415090 GCACATGCTTCTAGGCACTTTG 60.415 50.000 0.00 0.00 45.36 2.77
147 148 1.815003 GCACATGCTTCTAGGCACTTT 59.185 47.619 0.00 0.00 45.36 2.66
148 149 1.457346 GCACATGCTTCTAGGCACTT 58.543 50.000 0.00 0.00 45.36 3.16
149 150 3.165606 GCACATGCTTCTAGGCACT 57.834 52.632 0.00 0.00 45.36 4.40
160 161 3.873883 GCCAGCTCGAGCACATGC 61.874 66.667 36.87 27.22 45.16 4.06
161 162 2.125229 AGCCAGCTCGAGCACATG 60.125 61.111 36.87 25.97 45.16 3.21
162 163 1.897225 AAGAGCCAGCTCGAGCACAT 61.897 55.000 36.87 20.56 46.90 3.21
163 164 2.498291 GAAGAGCCAGCTCGAGCACA 62.498 60.000 36.87 0.00 46.90 4.57
164 165 1.809209 GAAGAGCCAGCTCGAGCAC 60.809 63.158 36.87 25.31 46.90 4.40
165 166 2.278330 TGAAGAGCCAGCTCGAGCA 61.278 57.895 36.87 12.20 46.90 4.26
166 167 1.809209 GTGAAGAGCCAGCTCGAGC 60.809 63.158 30.01 30.01 46.90 5.03
167 168 1.515952 CGTGAAGAGCCAGCTCGAG 60.516 63.158 13.70 8.45 46.90 4.04
168 169 1.524008 TTCGTGAAGAGCCAGCTCGA 61.524 55.000 13.70 5.23 46.90 4.04
169 170 1.075425 CTTCGTGAAGAGCCAGCTCG 61.075 60.000 13.70 2.84 46.90 5.03
170 171 0.244994 TCTTCGTGAAGAGCCAGCTC 59.755 55.000 11.78 11.78 42.06 4.09
171 172 2.355946 TCTTCGTGAAGAGCCAGCT 58.644 52.632 8.19 0.00 42.06 4.24
172 173 4.996976 TCTTCGTGAAGAGCCAGC 57.003 55.556 8.19 0.00 42.06 4.85
178 179 1.816863 AAGCGGGCTCTTCGTGAAGA 61.817 55.000 11.54 11.54 44.47 2.87
179 180 0.108804 TAAGCGGGCTCTTCGTGAAG 60.109 55.000 3.17 3.17 39.71 3.02
180 181 0.389426 GTAAGCGGGCTCTTCGTGAA 60.389 55.000 0.00 0.00 0.00 3.18
181 182 1.214589 GTAAGCGGGCTCTTCGTGA 59.785 57.895 0.00 0.00 0.00 4.35
182 183 1.810030 GGTAAGCGGGCTCTTCGTG 60.810 63.158 0.00 0.00 0.00 4.35
183 184 1.542187 AAGGTAAGCGGGCTCTTCGT 61.542 55.000 0.00 0.00 0.00 3.85
184 185 0.806492 GAAGGTAAGCGGGCTCTTCG 60.806 60.000 0.00 0.00 0.00 3.79
185 186 0.537653 AGAAGGTAAGCGGGCTCTTC 59.462 55.000 10.83 10.83 35.41 2.87
186 187 0.537653 GAGAAGGTAAGCGGGCTCTT 59.462 55.000 0.00 0.00 0.00 2.85
187 188 0.324830 AGAGAAGGTAAGCGGGCTCT 60.325 55.000 0.00 0.00 0.00 4.09
188 189 0.103390 GAGAGAAGGTAAGCGGGCTC 59.897 60.000 0.00 0.00 0.00 4.70
189 190 1.331399 GGAGAGAAGGTAAGCGGGCT 61.331 60.000 0.00 0.00 0.00 5.19
190 191 1.144276 GGAGAGAAGGTAAGCGGGC 59.856 63.158 0.00 0.00 0.00 6.13
191 192 0.747852 GAGGAGAGAAGGTAAGCGGG 59.252 60.000 0.00 0.00 0.00 6.13
192 193 1.770294 AGAGGAGAGAAGGTAAGCGG 58.230 55.000 0.00 0.00 0.00 5.52
193 194 3.020984 AGAAGAGGAGAGAAGGTAAGCG 58.979 50.000 0.00 0.00 0.00 4.68
194 195 4.278310 AGAGAAGAGGAGAGAAGGTAAGC 58.722 47.826 0.00 0.00 0.00 3.09
195 196 6.127451 GGAAAGAGAAGAGGAGAGAAGGTAAG 60.127 46.154 0.00 0.00 0.00 2.34
196 197 5.717654 GGAAAGAGAAGAGGAGAGAAGGTAA 59.282 44.000 0.00 0.00 0.00 2.85
197 198 5.015817 AGGAAAGAGAAGAGGAGAGAAGGTA 59.984 44.000 0.00 0.00 0.00 3.08
198 199 4.093743 GGAAAGAGAAGAGGAGAGAAGGT 58.906 47.826 0.00 0.00 0.00 3.50
199 200 4.352893 AGGAAAGAGAAGAGGAGAGAAGG 58.647 47.826 0.00 0.00 0.00 3.46
200 201 4.402474 GGAGGAAAGAGAAGAGGAGAGAAG 59.598 50.000 0.00 0.00 0.00 2.85
201 202 4.202727 TGGAGGAAAGAGAAGAGGAGAGAA 60.203 45.833 0.00 0.00 0.00 2.87
202 203 3.335183 TGGAGGAAAGAGAAGAGGAGAGA 59.665 47.826 0.00 0.00 0.00 3.10
203 204 3.707316 TGGAGGAAAGAGAAGAGGAGAG 58.293 50.000 0.00 0.00 0.00 3.20
204 205 3.835395 GTTGGAGGAAAGAGAAGAGGAGA 59.165 47.826 0.00 0.00 0.00 3.71
205 206 3.837731 AGTTGGAGGAAAGAGAAGAGGAG 59.162 47.826 0.00 0.00 0.00 3.69
206 207 3.863086 AGTTGGAGGAAAGAGAAGAGGA 58.137 45.455 0.00 0.00 0.00 3.71
207 208 5.729510 CTTAGTTGGAGGAAAGAGAAGAGG 58.270 45.833 0.00 0.00 0.00 3.69
208 209 5.175127 GCTTAGTTGGAGGAAAGAGAAGAG 58.825 45.833 0.00 0.00 0.00 2.85
209 210 4.593206 TGCTTAGTTGGAGGAAAGAGAAGA 59.407 41.667 0.00 0.00 0.00 2.87
210 211 4.899502 TGCTTAGTTGGAGGAAAGAGAAG 58.100 43.478 0.00 0.00 0.00 2.85
211 212 4.593206 TCTGCTTAGTTGGAGGAAAGAGAA 59.407 41.667 0.00 0.00 0.00 2.87
212 213 4.160329 TCTGCTTAGTTGGAGGAAAGAGA 58.840 43.478 0.00 0.00 0.00 3.10
213 214 4.543590 TCTGCTTAGTTGGAGGAAAGAG 57.456 45.455 0.00 0.00 0.00 2.85
214 215 4.974645 TTCTGCTTAGTTGGAGGAAAGA 57.025 40.909 0.00 0.00 0.00 2.52
215 216 7.872113 ATATTTCTGCTTAGTTGGAGGAAAG 57.128 36.000 0.00 0.00 0.00 2.62
216 217 8.548877 AGTATATTTCTGCTTAGTTGGAGGAAA 58.451 33.333 0.00 0.00 0.00 3.13
217 218 8.090788 AGTATATTTCTGCTTAGTTGGAGGAA 57.909 34.615 0.00 0.00 0.00 3.36
218 219 7.676683 AGTATATTTCTGCTTAGTTGGAGGA 57.323 36.000 0.00 0.00 0.00 3.71
238 239 9.517609 CGCGAGCTATAAGGAATAAATTAGTAT 57.482 33.333 0.00 0.00 0.00 2.12
239 240 7.972277 CCGCGAGCTATAAGGAATAAATTAGTA 59.028 37.037 8.23 0.00 0.00 1.82
240 241 6.812160 CCGCGAGCTATAAGGAATAAATTAGT 59.188 38.462 8.23 0.00 0.00 2.24
241 242 7.009357 GTCCGCGAGCTATAAGGAATAAATTAG 59.991 40.741 8.23 0.00 32.20 1.73
242 243 6.810182 GTCCGCGAGCTATAAGGAATAAATTA 59.190 38.462 8.23 0.00 32.20 1.40
243 244 5.638234 GTCCGCGAGCTATAAGGAATAAATT 59.362 40.000 8.23 0.00 32.20 1.82
244 245 5.047235 AGTCCGCGAGCTATAAGGAATAAAT 60.047 40.000 8.23 0.00 32.20 1.40
245 246 4.280174 AGTCCGCGAGCTATAAGGAATAAA 59.720 41.667 8.23 0.00 32.20 1.40
246 247 3.825014 AGTCCGCGAGCTATAAGGAATAA 59.175 43.478 8.23 0.00 32.20 1.40
247 248 3.418995 AGTCCGCGAGCTATAAGGAATA 58.581 45.455 8.23 0.00 32.20 1.75
248 249 2.229302 GAGTCCGCGAGCTATAAGGAAT 59.771 50.000 8.23 0.00 32.20 3.01
249 250 1.607628 GAGTCCGCGAGCTATAAGGAA 59.392 52.381 8.23 0.00 32.20 3.36
250 251 1.236628 GAGTCCGCGAGCTATAAGGA 58.763 55.000 8.23 0.00 0.00 3.36
251 252 0.952280 TGAGTCCGCGAGCTATAAGG 59.048 55.000 8.23 0.00 0.00 2.69
252 253 1.664588 GCTGAGTCCGCGAGCTATAAG 60.665 57.143 8.23 5.18 0.00 1.73
253 254 0.311165 GCTGAGTCCGCGAGCTATAA 59.689 55.000 8.23 0.00 0.00 0.98
254 255 0.535328 AGCTGAGTCCGCGAGCTATA 60.535 55.000 16.62 2.65 41.33 1.31
255 256 1.791103 GAGCTGAGTCCGCGAGCTAT 61.791 60.000 17.91 0.00 43.18 2.97
256 257 2.438614 AGCTGAGTCCGCGAGCTA 60.439 61.111 16.62 0.00 41.33 3.32
257 258 2.878089 TAGAGCTGAGTCCGCGAGCT 62.878 60.000 17.93 17.93 45.82 4.09
258 259 1.791103 ATAGAGCTGAGTCCGCGAGC 61.791 60.000 8.23 8.43 0.00 5.03
259 260 0.665835 AATAGAGCTGAGTCCGCGAG 59.334 55.000 8.23 0.00 0.00 5.03
260 261 0.382158 CAATAGAGCTGAGTCCGCGA 59.618 55.000 8.23 0.00 0.00 5.87
261 262 0.101399 ACAATAGAGCTGAGTCCGCG 59.899 55.000 0.00 0.00 0.00 6.46
262 263 2.359531 AGTACAATAGAGCTGAGTCCGC 59.640 50.000 0.00 0.00 0.00 5.54
263 264 3.303461 CGAGTACAATAGAGCTGAGTCCG 60.303 52.174 0.00 0.00 0.00 4.79
264 265 3.549221 GCGAGTACAATAGAGCTGAGTCC 60.549 52.174 0.00 0.00 0.00 3.85
265 266 3.314080 AGCGAGTACAATAGAGCTGAGTC 59.686 47.826 0.00 0.00 33.31 3.36
266 267 3.283751 AGCGAGTACAATAGAGCTGAGT 58.716 45.455 0.00 0.00 33.31 3.41
267 268 3.563808 AGAGCGAGTACAATAGAGCTGAG 59.436 47.826 0.00 0.00 34.85 3.35
268 269 3.546724 AGAGCGAGTACAATAGAGCTGA 58.453 45.455 0.00 0.00 34.85 4.26
269 270 3.980646 AGAGCGAGTACAATAGAGCTG 57.019 47.619 0.00 0.00 34.85 4.24
270 271 7.094549 CCTTATTAGAGCGAGTACAATAGAGCT 60.095 40.741 0.00 0.00 37.69 4.09
271 272 7.024768 CCTTATTAGAGCGAGTACAATAGAGC 58.975 42.308 0.00 0.00 0.00 4.09
272 273 8.101654 ACCTTATTAGAGCGAGTACAATAGAG 57.898 38.462 0.00 0.00 0.00 2.43
273 274 8.350722 CAACCTTATTAGAGCGAGTACAATAGA 58.649 37.037 0.00 0.00 0.00 1.98
274 275 7.115095 GCAACCTTATTAGAGCGAGTACAATAG 59.885 40.741 0.00 0.00 0.00 1.73
275 276 6.921857 GCAACCTTATTAGAGCGAGTACAATA 59.078 38.462 0.00 0.00 0.00 1.90
276 277 5.753921 GCAACCTTATTAGAGCGAGTACAAT 59.246 40.000 0.00 0.00 0.00 2.71
277 278 5.105473 AGCAACCTTATTAGAGCGAGTACAA 60.105 40.000 0.00 0.00 0.00 2.41
278 279 4.401519 AGCAACCTTATTAGAGCGAGTACA 59.598 41.667 0.00 0.00 0.00 2.90
279 280 4.934515 AGCAACCTTATTAGAGCGAGTAC 58.065 43.478 0.00 0.00 0.00 2.73
280 281 5.126545 TCAAGCAACCTTATTAGAGCGAGTA 59.873 40.000 0.00 0.00 0.00 2.59
281 282 4.081642 TCAAGCAACCTTATTAGAGCGAGT 60.082 41.667 0.00 0.00 0.00 4.18
282 283 4.268884 GTCAAGCAACCTTATTAGAGCGAG 59.731 45.833 0.00 0.00 0.00 5.03
283 284 4.181578 GTCAAGCAACCTTATTAGAGCGA 58.818 43.478 0.00 0.00 0.00 4.93
284 285 3.932710 TGTCAAGCAACCTTATTAGAGCG 59.067 43.478 0.00 0.00 0.00 5.03
285 286 4.333926 CCTGTCAAGCAACCTTATTAGAGC 59.666 45.833 0.00 0.00 0.00 4.09
286 287 5.491982 ACCTGTCAAGCAACCTTATTAGAG 58.508 41.667 0.00 0.00 0.00 2.43
287 288 5.499004 ACCTGTCAAGCAACCTTATTAGA 57.501 39.130 0.00 0.00 0.00 2.10
384 390 4.604156 TGGGTTATTGCAATGTGGTATGA 58.396 39.130 22.27 0.00 0.00 2.15
674 687 1.479323 GGGTAGCGTGATTAGTGGTGA 59.521 52.381 0.00 0.00 0.00 4.02
825 875 6.194235 ACTGTGCATTTCCCCTTATATTTGA 58.806 36.000 0.00 0.00 0.00 2.69
832 882 2.039216 TCGAACTGTGCATTTCCCCTTA 59.961 45.455 0.00 0.00 0.00 2.69
1815 1880 3.294750 ACGCCAAGCTCCGTGATA 58.705 55.556 6.28 0.00 36.18 2.15
1836 1901 3.399330 GAATCCATATTCGCGGGAAAGA 58.601 45.455 19.42 13.28 35.40 2.52
1879 1947 2.360483 TGAATGCCGAACAAAGCTTGAA 59.640 40.909 0.00 0.00 0.00 2.69
1884 1952 2.422276 AGTTGAATGCCGAACAAAGC 57.578 45.000 0.00 0.00 0.00 3.51
1911 1979 5.986004 AGATAAACGCTGTAAATAGCCAC 57.014 39.130 0.00 0.00 40.59 5.01
2110 2180 3.330126 AGCTCTACAGTGGGGCTAATA 57.670 47.619 10.10 0.00 0.00 0.98
2258 2329 2.177394 TGCATTACAACCAGCGAGAA 57.823 45.000 0.00 0.00 0.00 2.87
2302 2373 9.462174 CAAACTTGCTTTCACTATCATAAAACA 57.538 29.630 0.00 0.00 0.00 2.83
2365 2437 5.906073 ACAAGTAAACAAGCAAGCAAATCT 58.094 33.333 0.00 0.00 0.00 2.40
2400 2472 0.738975 TGTGCTTATCCGACGGAGAG 59.261 55.000 22.99 21.35 34.05 3.20
2404 2476 2.154854 ATGATGTGCTTATCCGACGG 57.845 50.000 7.84 7.84 0.00 4.79
2405 2477 4.546570 TCTAATGATGTGCTTATCCGACG 58.453 43.478 0.00 0.00 0.00 5.12
2452 2536 1.742831 TGCTCACACCAAACAGAACAC 59.257 47.619 0.00 0.00 0.00 3.32
2528 2613 7.985476 ACGTTAGAGGGATGTATTCAAAATTG 58.015 34.615 0.00 0.00 0.00 2.32
2536 2621 6.134754 AGGTTAGACGTTAGAGGGATGTATT 58.865 40.000 0.00 0.00 0.00 1.89
2540 2625 3.318557 GGAGGTTAGACGTTAGAGGGATG 59.681 52.174 0.00 0.00 0.00 3.51
2546 2631 2.097825 GCAGGGAGGTTAGACGTTAGA 58.902 52.381 0.00 0.00 0.00 2.10
2547 2632 2.099427 GAGCAGGGAGGTTAGACGTTAG 59.901 54.545 0.00 0.00 0.00 2.34
2548 2633 2.097825 GAGCAGGGAGGTTAGACGTTA 58.902 52.381 0.00 0.00 0.00 3.18
2549 2634 0.896226 GAGCAGGGAGGTTAGACGTT 59.104 55.000 0.00 0.00 0.00 3.99
2550 2635 0.039911 AGAGCAGGGAGGTTAGACGT 59.960 55.000 0.00 0.00 0.00 4.34
2551 2636 0.741915 GAGAGCAGGGAGGTTAGACG 59.258 60.000 0.00 0.00 0.00 4.18
2552 2637 1.116308 GGAGAGCAGGGAGGTTAGAC 58.884 60.000 0.00 0.00 0.00 2.59
2747 2832 3.508793 AGCTCATGGGTTCTGTTTTCATG 59.491 43.478 0.00 0.00 37.23 3.07
3098 3183 6.418057 ACTTGAATCTCATCTATCCCAGAC 57.582 41.667 0.00 0.00 35.62 3.51
3104 3189 6.478344 ACGCAGAAACTTGAATCTCATCTATC 59.522 38.462 0.00 0.00 0.00 2.08
3196 3281 7.900782 TGATAGTTAGCAACTGTAAAGGTTC 57.099 36.000 10.59 0.00 42.84 3.62
3279 3364 6.320494 TGCCGAACAAACATAAACATAGTT 57.680 33.333 0.00 0.00 0.00 2.24
3283 3368 5.404968 CACATTGCCGAACAAACATAAACAT 59.595 36.000 0.00 0.00 42.86 2.71
3626 3711 3.088194 CCGAGCAAGGCGTAATACTAA 57.912 47.619 0.00 0.00 0.00 2.24
3641 3726 0.873054 CAGATCAATCATGGCCGAGC 59.127 55.000 0.00 0.00 0.00 5.03
3652 3737 5.300792 TGCATTGCATACATGACAGATCAAT 59.699 36.000 7.38 0.00 33.71 2.57
3677 3762 8.829612 CAAATGGTCAAGAAACATTAAAAAGCT 58.170 29.630 0.00 0.00 34.00 3.74
3682 3767 7.011857 GGCAACAAATGGTCAAGAAACATTAAA 59.988 33.333 0.00 0.00 34.00 1.52
3688 3773 4.058721 AGGCAACAAATGGTCAAGAAAC 57.941 40.909 0.00 0.00 41.41 2.78
3842 3929 8.076178 AGCAACAATTAATACGGATAAATCAGC 58.924 33.333 0.00 0.00 0.00 4.26
3843 3930 9.385902 CAGCAACAATTAATACGGATAAATCAG 57.614 33.333 0.00 0.00 0.00 2.90
3844 3931 9.114952 TCAGCAACAATTAATACGGATAAATCA 57.885 29.630 0.00 0.00 0.00 2.57
3860 3947 9.762933 ACAACTTTGTATTAAATCAGCAACAAT 57.237 25.926 0.00 0.00 40.16 2.71
3862 3949 9.672086 GTACAACTTTGTATTAAATCAGCAACA 57.328 29.630 5.16 0.00 44.59 3.33
3863 3950 9.893305 AGTACAACTTTGTATTAAATCAGCAAC 57.107 29.630 5.16 0.00 44.59 4.17
3916 4003 6.546772 AGCATAAGTTGTAGTACTACTCCCTC 59.453 42.308 28.56 15.94 33.24 4.30
4051 4205 6.422701 ACTGTCTGAATGCAATTGTCAAAATG 59.577 34.615 7.40 0.00 36.07 2.32
4053 4207 5.904941 ACTGTCTGAATGCAATTGTCAAAA 58.095 33.333 7.40 0.00 36.07 2.44
4086 4240 8.792633 CCAACTATGAATAAGTGAACAGGAAAA 58.207 33.333 0.00 0.00 0.00 2.29
4098 4252 7.910162 CCGATTTGTCAACCAACTATGAATAAG 59.090 37.037 0.00 0.00 31.20 1.73
4099 4253 7.148154 CCCGATTTGTCAACCAACTATGAATAA 60.148 37.037 0.00 0.00 31.20 1.40
4100 4254 6.317642 CCCGATTTGTCAACCAACTATGAATA 59.682 38.462 0.00 0.00 31.20 1.75
4101 4255 5.125417 CCCGATTTGTCAACCAACTATGAAT 59.875 40.000 0.00 0.00 31.20 2.57
4102 4256 4.457603 CCCGATTTGTCAACCAACTATGAA 59.542 41.667 0.00 0.00 31.20 2.57
4103 4257 4.006989 CCCGATTTGTCAACCAACTATGA 58.993 43.478 0.00 0.00 31.20 2.15
4104 4258 3.756434 ACCCGATTTGTCAACCAACTATG 59.244 43.478 0.00 0.00 31.20 2.23
4105 4259 4.007659 GACCCGATTTGTCAACCAACTAT 58.992 43.478 0.00 0.00 31.20 2.12
4106 4260 3.181453 TGACCCGATTTGTCAACCAACTA 60.181 43.478 0.00 0.00 39.66 2.24
4107 4261 2.227194 GACCCGATTTGTCAACCAACT 58.773 47.619 0.00 0.00 31.20 3.16
4108 4262 1.950909 TGACCCGATTTGTCAACCAAC 59.049 47.619 0.00 0.00 39.66 3.77
4109 4263 2.158740 TCTGACCCGATTTGTCAACCAA 60.159 45.455 0.00 0.00 41.85 3.67
4110 4264 1.418264 TCTGACCCGATTTGTCAACCA 59.582 47.619 0.00 0.00 41.85 3.67
4111 4265 2.178912 TCTGACCCGATTTGTCAACC 57.821 50.000 0.00 0.00 41.85 3.77
4112 4266 2.875933 TGTTCTGACCCGATTTGTCAAC 59.124 45.455 0.00 0.00 41.85 3.18
4113 4267 3.138304 CTGTTCTGACCCGATTTGTCAA 58.862 45.455 0.00 0.00 41.85 3.18
4114 4268 2.104111 ACTGTTCTGACCCGATTTGTCA 59.896 45.455 0.00 0.00 40.28 3.58
4115 4269 2.480419 CACTGTTCTGACCCGATTTGTC 59.520 50.000 0.00 0.00 0.00 3.18
4116 4270 2.158813 ACACTGTTCTGACCCGATTTGT 60.159 45.455 0.00 0.00 0.00 2.83
4117 4271 2.224079 CACACTGTTCTGACCCGATTTG 59.776 50.000 0.00 0.00 0.00 2.32
4118 4272 2.158813 ACACACTGTTCTGACCCGATTT 60.159 45.455 0.00 0.00 0.00 2.17
4119 4273 1.416401 ACACACTGTTCTGACCCGATT 59.584 47.619 0.00 0.00 0.00 3.34
4120 4274 1.048601 ACACACTGTTCTGACCCGAT 58.951 50.000 0.00 0.00 0.00 4.18
4121 4275 1.694844 TACACACTGTTCTGACCCGA 58.305 50.000 0.00 0.00 0.00 5.14
4122 4276 2.519377 TTACACACTGTTCTGACCCG 57.481 50.000 0.00 0.00 0.00 5.28
4123 4277 3.537580 TGTTTACACACTGTTCTGACCC 58.462 45.455 0.00 0.00 0.00 4.46
4124 4278 4.189231 ACTGTTTACACACTGTTCTGACC 58.811 43.478 0.00 0.00 0.00 4.02
4125 4279 6.897259 TTACTGTTTACACACTGTTCTGAC 57.103 37.500 0.00 0.00 31.81 3.51
4126 4280 7.101054 AGTTTACTGTTTACACACTGTTCTGA 58.899 34.615 0.00 0.00 31.81 3.27
4127 4281 7.303634 AGTTTACTGTTTACACACTGTTCTG 57.696 36.000 0.00 0.00 31.81 3.02
4128 4282 7.916914 AAGTTTACTGTTTACACACTGTTCT 57.083 32.000 0.00 0.00 31.81 3.01
4129 4283 8.959734 AAAAGTTTACTGTTTACACACTGTTC 57.040 30.769 0.00 0.00 31.81 3.18
4152 4306 9.936759 AAAAGACAAATTCAAGGTCTGTAAAAA 57.063 25.926 0.00 0.00 40.80 1.94
4153 4307 9.936759 AAAAAGACAAATTCAAGGTCTGTAAAA 57.063 25.926 0.00 0.00 40.80 1.52
4176 4330 3.743521 TCTAAGCAGCTCTCAGCAAAAA 58.256 40.909 0.00 0.00 45.56 1.94
4177 4331 3.407424 TCTAAGCAGCTCTCAGCAAAA 57.593 42.857 0.00 0.00 45.56 2.44
4178 4332 3.268330 CATCTAAGCAGCTCTCAGCAAA 58.732 45.455 0.00 0.00 45.56 3.68
4179 4333 2.235650 ACATCTAAGCAGCTCTCAGCAA 59.764 45.455 0.00 0.00 45.56 3.91
4180 4334 1.829849 ACATCTAAGCAGCTCTCAGCA 59.170 47.619 0.00 0.00 45.56 4.41
4181 4335 2.472816 GACATCTAAGCAGCTCTCAGC 58.527 52.381 0.00 0.00 42.84 4.26
4182 4336 2.429971 TGGACATCTAAGCAGCTCTCAG 59.570 50.000 0.00 0.00 0.00 3.35
4183 4337 2.460669 TGGACATCTAAGCAGCTCTCA 58.539 47.619 0.00 0.00 0.00 3.27
4184 4338 3.533606 TTGGACATCTAAGCAGCTCTC 57.466 47.619 0.00 0.00 0.00 3.20
4185 4339 3.988976 TTTGGACATCTAAGCAGCTCT 57.011 42.857 0.00 0.00 0.00 4.09
4186 4340 4.194640 TCATTTGGACATCTAAGCAGCTC 58.805 43.478 0.00 0.00 0.00 4.09
4187 4341 4.197750 CTCATTTGGACATCTAAGCAGCT 58.802 43.478 0.00 0.00 0.00 4.24
4188 4342 3.944015 ACTCATTTGGACATCTAAGCAGC 59.056 43.478 0.00 0.00 0.00 5.25
4189 4343 5.645067 TCAACTCATTTGGACATCTAAGCAG 59.355 40.000 0.00 0.00 35.69 4.24
4190 4344 5.559770 TCAACTCATTTGGACATCTAAGCA 58.440 37.500 0.00 0.00 35.69 3.91
4191 4345 6.500684 TTCAACTCATTTGGACATCTAAGC 57.499 37.500 0.00 0.00 35.69 3.09
4192 4346 9.918630 AAATTTCAACTCATTTGGACATCTAAG 57.081 29.630 0.00 0.00 35.69 2.18
4193 4347 9.695526 CAAATTTCAACTCATTTGGACATCTAA 57.304 29.630 0.00 0.00 36.93 2.10
4202 4356 4.386652 CCGCTCCAAATTTCAACTCATTTG 59.613 41.667 0.00 0.00 39.25 2.32
4203 4357 4.280677 TCCGCTCCAAATTTCAACTCATTT 59.719 37.500 0.00 0.00 0.00 2.32
4204 4358 3.826157 TCCGCTCCAAATTTCAACTCATT 59.174 39.130 0.00 0.00 0.00 2.57
4205 4359 3.191371 GTCCGCTCCAAATTTCAACTCAT 59.809 43.478 0.00 0.00 0.00 2.90
4206 4360 2.552315 GTCCGCTCCAAATTTCAACTCA 59.448 45.455 0.00 0.00 0.00 3.41
4207 4361 2.095212 GGTCCGCTCCAAATTTCAACTC 60.095 50.000 0.00 0.00 0.00 3.01
4208 4362 1.886542 GGTCCGCTCCAAATTTCAACT 59.113 47.619 0.00 0.00 0.00 3.16
4209 4363 1.886542 AGGTCCGCTCCAAATTTCAAC 59.113 47.619 0.00 0.00 0.00 3.18
4210 4364 2.159382 GAGGTCCGCTCCAAATTTCAA 58.841 47.619 0.00 0.00 0.00 2.69
4211 4365 1.073125 TGAGGTCCGCTCCAAATTTCA 59.927 47.619 0.00 0.00 0.00 2.69
4212 4366 1.468914 GTGAGGTCCGCTCCAAATTTC 59.531 52.381 0.00 0.00 0.00 2.17
4213 4367 1.534729 GTGAGGTCCGCTCCAAATTT 58.465 50.000 0.00 0.00 0.00 1.82
4214 4368 0.673644 CGTGAGGTCCGCTCCAAATT 60.674 55.000 0.00 0.00 0.00 1.82
4215 4369 1.079127 CGTGAGGTCCGCTCCAAAT 60.079 57.895 0.00 0.00 0.00 2.32
4216 4370 2.342279 CGTGAGGTCCGCTCCAAA 59.658 61.111 0.00 0.00 0.00 3.28
4223 4377 1.086696 AATTTGATGCGTGAGGTCCG 58.913 50.000 0.00 0.00 0.00 4.79
4224 4378 4.130118 AGATAATTTGATGCGTGAGGTCC 58.870 43.478 0.00 0.00 0.00 4.46
4225 4379 5.177696 GGTAGATAATTTGATGCGTGAGGTC 59.822 44.000 0.00 0.00 0.00 3.85
4226 4380 5.057149 GGTAGATAATTTGATGCGTGAGGT 58.943 41.667 0.00 0.00 0.00 3.85
4227 4381 5.050091 GTGGTAGATAATTTGATGCGTGAGG 60.050 44.000 0.00 0.00 0.00 3.86
4228 4382 5.523552 TGTGGTAGATAATTTGATGCGTGAG 59.476 40.000 0.00 0.00 0.00 3.51
4229 4383 5.293324 GTGTGGTAGATAATTTGATGCGTGA 59.707 40.000 0.00 0.00 0.00 4.35
4230 4384 5.064579 TGTGTGGTAGATAATTTGATGCGTG 59.935 40.000 0.00 0.00 0.00 5.34
4231 4385 5.182487 TGTGTGGTAGATAATTTGATGCGT 58.818 37.500 0.00 0.00 0.00 5.24
4232 4386 5.733226 TGTGTGGTAGATAATTTGATGCG 57.267 39.130 0.00 0.00 0.00 4.73
4233 4387 8.755696 TTTTTGTGTGGTAGATAATTTGATGC 57.244 30.769 0.00 0.00 0.00 3.91
4301 4455 1.100463 TGCACCAGCGCTCAGAAAAA 61.100 50.000 7.13 0.00 46.23 1.94
4302 4456 1.509644 CTGCACCAGCGCTCAGAAAA 61.510 55.000 16.59 0.00 46.23 2.29
4303 4457 1.962822 CTGCACCAGCGCTCAGAAA 60.963 57.895 16.59 0.00 46.23 2.52
4304 4458 2.176314 ATCTGCACCAGCGCTCAGAA 62.176 55.000 24.85 12.41 46.23 3.02
4305 4459 2.653087 ATCTGCACCAGCGCTCAGA 61.653 57.895 23.74 23.74 46.23 3.27
4306 4460 2.125229 ATCTGCACCAGCGCTCAG 60.125 61.111 7.13 12.70 46.23 3.35
4307 4461 2.435410 CATCTGCACCAGCGCTCA 60.435 61.111 7.13 0.48 46.23 4.26
4308 4462 2.125391 TCATCTGCACCAGCGCTC 60.125 61.111 7.13 0.00 46.23 5.03
4309 4463 2.125229 CTCATCTGCACCAGCGCT 60.125 61.111 2.64 2.64 46.23 5.92
4310 4464 3.873883 GCTCATCTGCACCAGCGC 61.874 66.667 0.00 0.00 46.23 5.92
4311 4465 3.200593 GGCTCATCTGCACCAGCG 61.201 66.667 0.00 0.00 46.23 5.18
4312 4466 2.827642 GGGCTCATCTGCACCAGC 60.828 66.667 0.00 0.00 42.57 4.85
4313 4467 2.513204 CGGGCTCATCTGCACCAG 60.513 66.667 0.00 0.00 31.60 4.00
4314 4468 4.100084 CCGGGCTCATCTGCACCA 62.100 66.667 0.00 0.00 31.60 4.17
4315 4469 4.864334 CCCGGGCTCATCTGCACC 62.864 72.222 8.08 0.00 31.60 5.01
4316 4470 3.746949 CTCCCGGGCTCATCTGCAC 62.747 68.421 18.49 0.00 34.04 4.57
4317 4471 3.473647 CTCCCGGGCTCATCTGCA 61.474 66.667 18.49 0.00 34.04 4.41
4318 4472 4.925861 GCTCCCGGGCTCATCTGC 62.926 72.222 18.49 7.22 0.00 4.26
4319 4473 3.457625 CTGCTCCCGGGCTCATCTG 62.458 68.421 18.49 0.27 0.00 2.90
4320 4474 3.160047 CTGCTCCCGGGCTCATCT 61.160 66.667 18.49 0.00 0.00 2.90
4321 4475 2.257409 TTTCTGCTCCCGGGCTCATC 62.257 60.000 18.49 2.79 0.00 2.92
4322 4476 2.300967 TTTCTGCTCCCGGGCTCAT 61.301 57.895 18.49 0.00 0.00 2.90
4323 4477 2.927856 TTTCTGCTCCCGGGCTCA 60.928 61.111 18.49 15.04 0.00 4.26
4324 4478 2.436824 GTTTCTGCTCCCGGGCTC 60.437 66.667 18.49 10.53 0.00 4.70
4325 4479 2.930562 AGTTTCTGCTCCCGGGCT 60.931 61.111 18.49 0.25 0.00 5.19
4326 4480 2.436824 GAGTTTCTGCTCCCGGGC 60.437 66.667 18.49 5.48 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.