Multiple sequence alignment - TraesCS1D01G176500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G176500 chr1D 100.000 5651 0 0 1 5651 251299154 251304804 0.000000e+00 10436.0
1 TraesCS1D01G176500 chr1D 91.026 156 12 2 584 738 39901358 39901512 5.740000e-50 209.0
2 TraesCS1D01G176500 chr1A 95.656 3292 106 14 871 4130 321394954 321398240 0.000000e+00 5252.0
3 TraesCS1D01G176500 chr1A 92.285 687 43 8 4127 4811 321398293 321398971 0.000000e+00 966.0
4 TraesCS1D01G176500 chr1A 85.748 428 26 14 4802 5206 321399012 321399427 2.430000e-113 420.0
5 TraesCS1D01G176500 chr1A 92.473 93 6 1 2646 2737 527083928 527084020 1.280000e-26 132.0
6 TraesCS1D01G176500 chr1B 96.472 1871 59 4 787 2651 363163488 363161619 0.000000e+00 3083.0
7 TraesCS1D01G176500 chr1B 96.143 1400 31 12 2732 4113 363161621 363160227 0.000000e+00 2265.0
8 TraesCS1D01G176500 chr1B 92.469 810 33 10 4130 4927 363160155 363159362 0.000000e+00 1133.0
9 TraesCS1D01G176500 chr1B 89.324 562 37 5 1 539 363165788 363165227 0.000000e+00 684.0
10 TraesCS1D01G176500 chr1B 91.803 61 5 0 740 800 363165193 363165133 1.010000e-12 86.1
11 TraesCS1D01G176500 chr2A 94.773 440 12 4 5217 5651 207588456 207588023 0.000000e+00 675.0
12 TraesCS1D01G176500 chr2A 92.308 91 6 1 2645 2734 361381708 361381618 1.650000e-25 128.0
13 TraesCS1D01G176500 chr2A 91.111 90 7 1 2649 2737 65084900 65084811 2.770000e-23 121.0
14 TraesCS1D01G176500 chr4A 85.660 523 59 3 1 507 73613271 73613793 2.320000e-148 536.0
15 TraesCS1D01G176500 chr4D 82.772 267 44 2 82 347 347527076 347527341 2.630000e-58 237.0
16 TraesCS1D01G176500 chr4D 90.323 155 13 2 584 737 75173933 75174086 9.600000e-48 202.0
17 TraesCS1D01G176500 chr4D 89.744 156 14 2 584 738 36723189 36723343 1.240000e-46 198.0
18 TraesCS1D01G176500 chr4D 89.744 156 15 1 584 738 98657099 98657254 1.240000e-46 198.0
19 TraesCS1D01G176500 chr5D 91.720 157 11 2 584 739 337582978 337583133 3.430000e-52 217.0
20 TraesCS1D01G176500 chr5D 91.613 155 12 1 584 738 242073011 242073164 4.440000e-51 213.0
21 TraesCS1D01G176500 chr5D 93.333 90 5 1 2649 2737 339100572 339100483 1.280000e-26 132.0
22 TraesCS1D01G176500 chr5D 89.216 102 11 0 2633 2734 229933246 229933347 1.650000e-25 128.0
23 TraesCS1D01G176500 chr7D 90.968 155 13 1 584 738 79917319 79917166 2.060000e-49 207.0
24 TraesCS1D01G176500 chr7D 90.968 155 13 1 584 738 269854500 269854653 2.060000e-49 207.0
25 TraesCS1D01G176500 chr7D 89.506 162 13 4 577 737 41411369 41411527 9.600000e-48 202.0
26 TraesCS1D01G176500 chr6A 91.753 97 8 0 2642 2738 407093062 407093158 9.880000e-28 135.0
27 TraesCS1D01G176500 chr3D 95.238 84 4 0 3402 3485 461562782 461562699 3.550000e-27 134.0
28 TraesCS1D01G176500 chr7B 91.489 94 8 0 2641 2734 639796191 639796284 4.590000e-26 130.0
29 TraesCS1D01G176500 chr4B 91.579 95 7 1 2645 2738 447451799 447451705 4.590000e-26 130.0
30 TraesCS1D01G176500 chr4B 89.247 93 8 2 1018 1109 670446805 670446714 1.290000e-21 115.0
31 TraesCS1D01G176500 chr4B 95.745 47 2 0 1178 1224 670446594 670446548 6.070000e-10 76.8
32 TraesCS1D01G176500 chr6B 90.625 96 9 0 2641 2736 41404871 41404776 1.650000e-25 128.0
33 TraesCS1D01G176500 chr5A 89.130 92 8 2 1018 1108 708446913 708446823 4.630000e-21 113.0
34 TraesCS1D01G176500 chr5A 95.745 47 2 0 1178 1224 708446699 708446653 6.070000e-10 76.8
35 TraesCS1D01G176500 chrUn 95.745 47 2 0 1178 1224 29220731 29220777 6.070000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G176500 chr1D 251299154 251304804 5650 False 10436.000000 10436 100.000000 1 5651 1 chr1D.!!$F2 5650
1 TraesCS1D01G176500 chr1A 321394954 321399427 4473 False 2212.666667 5252 91.229667 871 5206 3 chr1A.!!$F2 4335
2 TraesCS1D01G176500 chr1B 363159362 363165788 6426 True 1450.220000 3083 93.242200 1 4927 5 chr1B.!!$R1 4926
3 TraesCS1D01G176500 chr4A 73613271 73613793 522 False 536.000000 536 85.660000 1 507 1 chr4A.!!$F1 506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
656 683 0.035458 CAGGGTTCAAGTCTCGGCTT 59.965 55.000 0.00 0.00 0.00 4.35 F
662 689 0.319900 TCAAGTCTCGGCTTGAGTGC 60.320 55.000 9.70 0.00 46.74 4.40 F
683 710 0.468226 TGGTGCTCACGGAGTTTTCT 59.532 50.000 3.38 0.00 41.61 2.52 F
727 754 0.685458 TAGTCTAGCCCGGGTTGGTC 60.685 60.000 24.63 16.39 35.15 4.02 F
1946 3643 0.313672 TCCAACCGTGCTGAATTTGC 59.686 50.000 0.00 0.00 0.00 3.68 F
3335 5056 1.148048 GGAGCTGATGAGGGAAGGC 59.852 63.158 0.00 0.00 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1599 3293 0.179124 TGTTTGAACAAGTTGCCCGC 60.179 50.0 1.81 0.0 35.67 6.13 R
1876 3573 0.620556 TCTGGAGGAATGGAGGTTGC 59.379 55.0 0.00 0.0 0.00 4.17 R
1930 3627 1.039856 AAGGCAAATTCAGCACGGTT 58.960 45.0 5.36 0.0 0.00 4.44 R
2722 4428 1.072266 ACAGCATTGTACCCCCTCAA 58.928 50.0 0.00 0.0 35.25 3.02 R
3931 5660 0.740737 ATTGGCAGACATTTAGCGCC 59.259 50.0 2.29 0.0 43.28 6.53 R
5326 7205 0.035458 CTATCCCGGGGAAGTCATGC 59.965 60.0 23.50 0.0 34.34 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 8.770438 AAGAGTTGTCTTGATCTCTTCATTAC 57.230 34.615 0.00 0.00 41.78 1.89
225 226 1.879575 AAGAGAACCATCATCCCGGA 58.120 50.000 0.73 0.00 0.00 5.14
227 228 0.830648 GAGAACCATCATCCCGGACA 59.169 55.000 0.73 0.00 0.00 4.02
238 239 1.670791 TCCCGGACAAAACAGTGAAC 58.329 50.000 0.73 0.00 0.00 3.18
289 290 5.050499 CACGAGCATGGAAGAAATCTGTATC 60.050 44.000 0.00 0.00 0.00 2.24
305 306 2.635787 TATCCCGGTCTCCCTCACGG 62.636 65.000 0.00 0.00 45.57 4.94
316 317 3.790437 CTCACGGAGCCAGCCCAT 61.790 66.667 0.00 0.00 0.00 4.00
320 321 4.559063 CGGAGCCAGCCCATCCTG 62.559 72.222 0.00 0.00 0.00 3.86
354 370 3.632604 CGCCTTAATCTCCTCACAGAGTA 59.367 47.826 0.00 0.00 35.28 2.59
377 400 9.118300 AGTAGTGATTCAATTGATCTTTCATCC 57.882 33.333 9.40 3.18 0.00 3.51
390 413 4.174009 TCTTTCATCCGCTAAAGAAGTCG 58.826 43.478 0.00 0.00 38.45 4.18
433 457 2.104451 TGGTACCTAGCGGTGTTTCAAA 59.896 45.455 14.36 0.00 45.18 2.69
453 477 7.887996 TCAAATTTAAAATCTGCTTGCGAAT 57.112 28.000 0.00 0.00 0.00 3.34
511 536 1.544246 CTCGTCACATGGTGTAGGTCA 59.456 52.381 0.00 0.00 34.79 4.02
514 539 2.632377 GTCACATGGTGTAGGTCATGG 58.368 52.381 0.00 0.00 43.49 3.66
533 558 6.556116 GTCATGGTTATTAGGTTAGGGGAGTA 59.444 42.308 0.00 0.00 0.00 2.59
546 571 9.516788 AGGTTAGGGGAGTATAGTATTTTCTTT 57.483 33.333 0.00 0.00 0.00 2.52
576 603 3.490078 CGTTGGGCTCTTTTGCAAGTAAA 60.490 43.478 0.00 0.00 34.04 2.01
583 610 8.757877 TGGGCTCTTTTGCAAGTAAATATTAAT 58.242 29.630 0.00 0.00 34.04 1.40
608 635 4.796225 GAGTGTAGCTCAGTCGGC 57.204 61.111 0.00 0.00 43.58 5.54
609 636 1.883732 GAGTGTAGCTCAGTCGGCA 59.116 57.895 0.00 0.00 43.58 5.69
610 637 0.243907 GAGTGTAGCTCAGTCGGCAA 59.756 55.000 0.00 0.00 43.58 4.52
611 638 0.244994 AGTGTAGCTCAGTCGGCAAG 59.755 55.000 0.00 0.00 0.00 4.01
612 639 0.737715 GTGTAGCTCAGTCGGCAAGG 60.738 60.000 0.00 0.00 0.00 3.61
613 640 1.811679 GTAGCTCAGTCGGCAAGGC 60.812 63.158 0.00 0.00 0.00 4.35
614 641 3.356639 TAGCTCAGTCGGCAAGGCG 62.357 63.158 9.95 9.95 0.00 5.52
652 679 2.015736 CCATCAGGGTTCAAGTCTCG 57.984 55.000 0.00 0.00 0.00 4.04
653 680 1.406069 CCATCAGGGTTCAAGTCTCGG 60.406 57.143 0.00 0.00 0.00 4.63
654 681 0.250513 ATCAGGGTTCAAGTCTCGGC 59.749 55.000 0.00 0.00 0.00 5.54
655 682 0.832135 TCAGGGTTCAAGTCTCGGCT 60.832 55.000 0.00 0.00 0.00 5.52
656 683 0.035458 CAGGGTTCAAGTCTCGGCTT 59.965 55.000 0.00 0.00 0.00 4.35
657 684 0.035458 AGGGTTCAAGTCTCGGCTTG 59.965 55.000 4.94 4.94 45.18 4.01
661 688 3.894257 TCAAGTCTCGGCTTGAGTG 57.106 52.632 9.70 0.00 46.74 3.51
662 689 0.319900 TCAAGTCTCGGCTTGAGTGC 60.320 55.000 9.70 0.00 46.74 4.40
663 690 1.373497 AAGTCTCGGCTTGAGTGCG 60.373 57.895 6.44 0.00 45.46 5.34
664 691 2.049063 GTCTCGGCTTGAGTGCGT 60.049 61.111 6.44 0.00 45.46 5.24
665 692 2.049156 TCTCGGCTTGAGTGCGTG 60.049 61.111 6.44 0.00 45.46 5.34
666 693 3.114616 CTCGGCTTGAGTGCGTGG 61.115 66.667 0.00 0.00 40.03 4.94
667 694 3.865929 CTCGGCTTGAGTGCGTGGT 62.866 63.158 0.00 0.00 40.03 4.16
668 695 3.716006 CGGCTTGAGTGCGTGGTG 61.716 66.667 0.00 0.00 0.00 4.17
669 696 4.030452 GGCTTGAGTGCGTGGTGC 62.030 66.667 0.00 0.00 46.70 5.01
670 697 2.974698 GCTTGAGTGCGTGGTGCT 60.975 61.111 0.00 0.00 46.63 4.40
671 698 2.959357 GCTTGAGTGCGTGGTGCTC 61.959 63.158 0.00 0.00 46.63 4.26
672 699 1.595109 CTTGAGTGCGTGGTGCTCA 60.595 57.895 0.00 0.00 46.63 4.26
673 700 1.835483 CTTGAGTGCGTGGTGCTCAC 61.835 60.000 0.00 1.50 46.63 3.51
680 707 4.456806 GTGGTGCTCACGGAGTTT 57.543 55.556 3.38 0.00 41.61 2.66
681 708 2.702847 GTGGTGCTCACGGAGTTTT 58.297 52.632 3.38 0.00 41.61 2.43
682 709 0.586802 GTGGTGCTCACGGAGTTTTC 59.413 55.000 3.38 0.00 41.61 2.29
683 710 0.468226 TGGTGCTCACGGAGTTTTCT 59.532 50.000 3.38 0.00 41.61 2.52
684 711 1.134220 TGGTGCTCACGGAGTTTTCTT 60.134 47.619 3.38 0.00 41.61 2.52
685 712 1.531578 GGTGCTCACGGAGTTTTCTTC 59.468 52.381 3.38 0.00 41.61 2.87
686 713 2.484889 GTGCTCACGGAGTTTTCTTCT 58.515 47.619 3.38 0.00 41.61 2.85
687 714 3.554337 GGTGCTCACGGAGTTTTCTTCTA 60.554 47.826 3.38 0.00 41.61 2.10
688 715 4.246458 GTGCTCACGGAGTTTTCTTCTAT 58.754 43.478 3.38 0.00 41.61 1.98
689 716 5.408356 GTGCTCACGGAGTTTTCTTCTATA 58.592 41.667 3.38 0.00 41.61 1.31
690 717 5.867716 GTGCTCACGGAGTTTTCTTCTATAA 59.132 40.000 3.38 0.00 41.61 0.98
691 718 6.367969 GTGCTCACGGAGTTTTCTTCTATAAA 59.632 38.462 3.38 0.00 41.61 1.40
692 719 6.932400 TGCTCACGGAGTTTTCTTCTATAAAA 59.068 34.615 3.38 0.00 41.61 1.52
693 720 7.442969 TGCTCACGGAGTTTTCTTCTATAAAAA 59.557 33.333 3.38 0.00 41.61 1.94
723 750 3.951765 GCTAGTCTAGCCCGGGTT 58.048 61.111 24.63 20.60 45.95 4.11
724 751 1.442148 GCTAGTCTAGCCCGGGTTG 59.558 63.158 24.63 12.73 45.95 3.77
725 752 2.029307 GCTAGTCTAGCCCGGGTTGG 62.029 65.000 24.63 19.66 45.95 3.77
726 753 0.686769 CTAGTCTAGCCCGGGTTGGT 60.687 60.000 24.63 5.63 35.15 3.67
727 754 0.685458 TAGTCTAGCCCGGGTTGGTC 60.685 60.000 24.63 16.39 35.15 4.02
728 755 2.120940 TCTAGCCCGGGTTGGTCA 59.879 61.111 24.63 0.00 35.15 4.02
729 756 2.267961 CTAGCCCGGGTTGGTCAC 59.732 66.667 24.63 2.54 35.15 3.67
730 757 2.203877 TAGCCCGGGTTGGTCACT 60.204 61.111 24.63 11.25 35.15 3.41
731 758 1.838073 CTAGCCCGGGTTGGTCACTT 61.838 60.000 24.63 0.00 35.15 3.16
732 759 1.420532 TAGCCCGGGTTGGTCACTTT 61.421 55.000 24.63 0.00 35.15 2.66
733 760 1.830847 GCCCGGGTTGGTCACTTTT 60.831 57.895 24.63 0.00 35.15 2.27
734 761 1.396607 GCCCGGGTTGGTCACTTTTT 61.397 55.000 24.63 0.00 35.15 1.94
816 2502 1.736645 GGCTGACGTACGTGCATGT 60.737 57.895 28.16 17.19 0.00 3.21
827 2513 1.569493 GTGCATGTGAGCGTTCGTT 59.431 52.632 0.00 0.00 37.31 3.85
870 2556 2.731374 CTCCGATCCTCCGAAGCC 59.269 66.667 0.00 0.00 0.00 4.35
871 2557 2.043349 TCCGATCCTCCGAAGCCA 60.043 61.111 0.00 0.00 0.00 4.75
875 2561 1.066587 GATCCTCCGAAGCCAGTCG 59.933 63.158 0.00 0.00 40.77 4.18
1231 2923 1.229209 GTCCTCAGGTCACCCCTCA 60.229 63.158 0.00 0.00 43.86 3.86
1282 2976 3.272334 GATCCGGCGTGTCATGGC 61.272 66.667 6.01 8.54 0.00 4.40
1362 3056 4.415332 GAGAAGACGGCGGCGACA 62.415 66.667 38.93 0.00 0.00 4.35
1599 3293 1.284982 CCTGGAGAACGACGTTGCAG 61.285 60.000 19.60 15.49 0.00 4.41
1765 3462 2.047655 GGCGGACGTGAACATGGA 60.048 61.111 0.00 0.00 0.00 3.41
1876 3573 4.568359 CGTCAAGTGGATCAAGATGGTAAG 59.432 45.833 0.00 0.00 0.00 2.34
1945 3642 2.034558 AGTTCCAACCGTGCTGAATTTG 59.965 45.455 0.00 0.00 0.00 2.32
1946 3643 0.313672 TCCAACCGTGCTGAATTTGC 59.686 50.000 0.00 0.00 0.00 3.68
2161 3860 4.274950 CGGGGGTGATGATATGTTAAACAC 59.725 45.833 0.00 0.00 0.00 3.32
2212 3911 1.929836 GCGATCTGCTGAACTAGTTGG 59.070 52.381 14.14 6.83 41.73 3.77
2302 4001 2.151202 CACGCACTTGTCCCTGTTATT 58.849 47.619 0.00 0.00 0.00 1.40
2523 4222 3.506844 CCAAAATGGCCAAAAGAATTGGG 59.493 43.478 10.96 1.56 39.90 4.12
2658 4357 4.748277 TCCTTAACAATTACTCCCTCCG 57.252 45.455 0.00 0.00 0.00 4.63
2676 4375 6.325545 TCCCTCCGTAAAGAAATATAAGAGCA 59.674 38.462 0.00 0.00 0.00 4.26
2698 4404 6.820656 AGCATTTAGATCACCACTTTAGTGAG 59.179 38.462 11.35 4.49 46.76 3.51
2729 4435 7.661847 ACGCTCTTATATTTCTTTATTGAGGGG 59.338 37.037 0.00 0.00 36.65 4.79
2772 4478 2.379907 AGATGAACTGGGTTTCATGGGT 59.620 45.455 3.13 0.00 44.59 4.51
3215 4934 6.818644 TGAGTACAGCAATACAGGATTTTCTC 59.181 38.462 0.00 0.00 0.00 2.87
3232 4951 6.801539 TTTTCTCGCATCAAGTAATGTTCT 57.198 33.333 0.00 0.00 0.00 3.01
3335 5056 1.148048 GGAGCTGATGAGGGAAGGC 59.852 63.158 0.00 0.00 0.00 4.35
3785 5507 3.463944 CTCTTTCGGGCAATAACGGTAT 58.536 45.455 0.00 0.00 0.00 2.73
3850 5579 9.603921 TTAAGTACATACTGTAAATGTTAGCCC 57.396 33.333 1.86 0.00 38.49 5.19
3931 5660 0.391130 TCATTCGAAACGAGCCCTGG 60.391 55.000 0.00 0.00 37.14 4.45
3945 5674 1.097547 CCCTGGGCGCTAAATGTCTG 61.098 60.000 7.64 0.00 0.00 3.51
4082 5812 1.562672 GCCAGGAAGGTAAGGGCAGA 61.563 60.000 0.00 0.00 44.01 4.26
4085 5815 1.630878 CAGGAAGGTAAGGGCAGAAGT 59.369 52.381 0.00 0.00 0.00 3.01
4105 5838 5.428184 AGTTATTGACCTTCTTCTCCCAG 57.572 43.478 0.00 0.00 0.00 4.45
4114 5847 1.125093 TCTTCTCCCAGGAAACCGCA 61.125 55.000 0.00 0.00 0.00 5.69
4116 5849 0.536460 TTCTCCCAGGAAACCGCAAC 60.536 55.000 0.00 0.00 0.00 4.17
4117 5850 1.971695 CTCCCAGGAAACCGCAACC 60.972 63.158 0.00 0.00 0.00 3.77
4119 5852 1.830408 CCCAGGAAACCGCAACCAA 60.830 57.895 0.00 0.00 0.00 3.67
4122 5855 0.038343 CAGGAAACCGCAACCAATGG 60.038 55.000 0.00 0.00 0.00 3.16
4125 5858 1.604438 GGAAACCGCAACCAATGGTTC 60.604 52.381 15.79 9.32 43.05 3.62
4127 5860 1.408969 AACCGCAACCAATGGTTCTT 58.591 45.000 15.79 1.62 43.05 2.52
4128 5861 2.279935 ACCGCAACCAATGGTTCTTA 57.720 45.000 15.79 0.00 43.05 2.10
4165 5953 2.500098 ACAGCTGAACCCATATGTACGT 59.500 45.455 23.35 0.00 0.00 3.57
4171 5959 5.597806 CTGAACCCATATGTACGTATGTGT 58.402 41.667 26.12 20.92 31.55 3.72
4280 6068 4.442073 CCTGAATGCTCTTTGTTTTTCGTG 59.558 41.667 0.00 0.00 0.00 4.35
4295 6086 0.178915 TCGTGGAAAAGAGAGGGGGA 60.179 55.000 0.00 0.00 0.00 4.81
4319 6110 4.212913 TCGGCCTCTGCATCGAGC 62.213 66.667 0.00 0.00 45.96 5.03
4340 6131 3.426568 GCACGCAGCCCTCTGAAC 61.427 66.667 0.00 0.00 42.95 3.18
4544 6347 4.477975 CGTCGTCGGGCACTCCTC 62.478 72.222 0.00 0.00 0.00 3.71
4545 6348 4.131088 GTCGTCGGGCACTCCTCC 62.131 72.222 0.00 0.00 0.00 4.30
4546 6349 4.361971 TCGTCGGGCACTCCTCCT 62.362 66.667 0.00 0.00 0.00 3.69
4748 6551 6.860790 AGGAAACTTTTGTTGTAAGGGAAA 57.139 33.333 0.00 0.00 42.67 3.13
4751 6554 6.127281 GGAAACTTTTGTTGTAAGGGAAAGGA 60.127 38.462 0.00 0.00 42.67 3.36
4777 6581 3.022406 ACGATCAGGGTACTTGTAGTCC 58.978 50.000 0.00 0.00 0.00 3.85
4792 6596 7.618137 ACTTGTAGTCCGTTTTATCCATAAGT 58.382 34.615 0.00 0.00 0.00 2.24
4793 6597 7.763071 ACTTGTAGTCCGTTTTATCCATAAGTC 59.237 37.037 0.00 0.00 0.00 3.01
4803 6659 8.184192 CGTTTTATCCATAAGTCTCAGCATTTT 58.816 33.333 0.00 0.00 0.00 1.82
4811 6667 8.896744 CCATAAGTCTCAGCATTTTCATAGAAA 58.103 33.333 0.00 0.00 0.00 2.52
4898 6754 7.591426 GTCATTTTATGCCGGATCAAACTATTC 59.409 37.037 5.05 0.00 0.00 1.75
4910 6766 7.515841 CGGATCAAACTATTCAACTCAAGATCG 60.516 40.741 0.00 0.00 31.43 3.69
4942 6821 3.057315 CCTTGTGGTTAGGAGCAACATTG 60.057 47.826 0.00 0.00 34.60 2.82
4945 6824 3.146066 GTGGTTAGGAGCAACATTGTCA 58.854 45.455 0.00 0.00 34.60 3.58
4954 6833 4.441356 GGAGCAACATTGTCAGGTTTGAAA 60.441 41.667 0.00 0.00 34.49 2.69
4958 6837 6.037391 AGCAACATTGTCAGGTTTGAAAATTG 59.963 34.615 0.00 0.00 38.86 2.32
4978 6857 1.341383 GGGTGGGTTGAGCATGAGAAT 60.341 52.381 0.00 0.00 0.00 2.40
4980 6859 2.165030 GGTGGGTTGAGCATGAGAATTG 59.835 50.000 0.00 0.00 0.00 2.32
4990 6869 3.508793 AGCATGAGAATTGTTTGTCCCTG 59.491 43.478 0.00 0.00 0.00 4.45
4995 6874 5.009631 TGAGAATTGTTTGTCCCTGTATGG 58.990 41.667 0.00 0.00 0.00 2.74
4998 6877 2.198827 TGTTTGTCCCTGTATGGCTG 57.801 50.000 0.00 0.00 0.00 4.85
5002 6881 1.821332 GTCCCTGTATGGCTGCAGC 60.821 63.158 30.88 30.88 34.10 5.25
5025 6904 4.883585 CCCACACATTATACAGATGTTGCT 59.116 41.667 0.00 0.00 35.64 3.91
5095 6974 2.224670 TGGGTCAGGTCTTTATTTGCGT 60.225 45.455 0.00 0.00 0.00 5.24
5098 6977 3.500680 GGTCAGGTCTTTATTTGCGTTGA 59.499 43.478 0.00 0.00 0.00 3.18
5103 6982 4.455877 AGGTCTTTATTTGCGTTGAAGGAG 59.544 41.667 0.00 0.00 0.00 3.69
5104 6983 4.379499 GGTCTTTATTTGCGTTGAAGGAGG 60.379 45.833 0.00 0.00 0.00 4.30
5108 6987 5.776173 TTATTTGCGTTGAAGGAGGAAAA 57.224 34.783 0.00 0.00 0.00 2.29
5111 6990 4.664150 TTGCGTTGAAGGAGGAAAATTT 57.336 36.364 0.00 0.00 0.00 1.82
5112 6991 4.664150 TGCGTTGAAGGAGGAAAATTTT 57.336 36.364 2.28 2.28 0.00 1.82
5113 6992 4.367450 TGCGTTGAAGGAGGAAAATTTTG 58.633 39.130 8.47 0.00 0.00 2.44
5157 7036 3.739300 TGTTCGATTCGGTTGAGAACTTC 59.261 43.478 6.18 0.00 41.05 3.01
5192 7071 3.388913 CCTCTTGTCCTTAAGGAGGGAT 58.611 50.000 24.91 0.00 46.49 3.85
5207 7086 9.640952 TTAAGGAGGGATTTAATAGAACATTGG 57.359 33.333 0.00 0.00 0.00 3.16
5208 7087 6.614657 AGGAGGGATTTAATAGAACATTGGG 58.385 40.000 0.00 0.00 0.00 4.12
5209 7088 5.243954 GGAGGGATTTAATAGAACATTGGGC 59.756 44.000 0.00 0.00 0.00 5.36
5210 7089 6.030727 AGGGATTTAATAGAACATTGGGCT 57.969 37.500 0.00 0.00 0.00 5.19
5211 7090 6.071320 AGGGATTTAATAGAACATTGGGCTC 58.929 40.000 0.00 0.00 0.00 4.70
5212 7091 5.833131 GGGATTTAATAGAACATTGGGCTCA 59.167 40.000 0.00 0.00 0.00 4.26
5213 7092 6.494835 GGGATTTAATAGAACATTGGGCTCAT 59.505 38.462 0.00 0.00 0.00 2.90
5214 7093 7.015584 GGGATTTAATAGAACATTGGGCTCATT 59.984 37.037 0.00 0.00 0.00 2.57
5215 7094 8.424133 GGATTTAATAGAACATTGGGCTCATTT 58.576 33.333 0.00 0.00 0.00 2.32
5216 7095 9.252962 GATTTAATAGAACATTGGGCTCATTTG 57.747 33.333 0.00 0.00 0.00 2.32
5217 7096 5.603170 AATAGAACATTGGGCTCATTTGG 57.397 39.130 0.00 0.00 0.00 3.28
5218 7097 2.181975 AGAACATTGGGCTCATTTGGG 58.818 47.619 0.00 0.00 0.00 4.12
5219 7098 2.178580 GAACATTGGGCTCATTTGGGA 58.821 47.619 0.00 0.00 0.00 4.37
5220 7099 2.555732 ACATTGGGCTCATTTGGGAT 57.444 45.000 0.00 0.00 0.00 3.85
5221 7100 2.391678 ACATTGGGCTCATTTGGGATC 58.608 47.619 0.00 0.00 0.00 3.36
5222 7101 1.690352 CATTGGGCTCATTTGGGATCC 59.310 52.381 1.92 1.92 0.00 3.36
5223 7102 0.032217 TTGGGCTCATTTGGGATCCC 60.032 55.000 25.22 25.22 42.42 3.85
5224 7103 1.529244 GGGCTCATTTGGGATCCCG 60.529 63.158 26.03 11.66 33.83 5.14
5225 7104 1.529244 GGCTCATTTGGGATCCCGG 60.529 63.158 26.03 14.89 39.42 5.73
5226 7105 2.196245 GCTCATTTGGGATCCCGGC 61.196 63.158 26.03 17.25 39.42 6.13
5227 7106 1.529244 CTCATTTGGGATCCCGGCC 60.529 63.158 26.03 2.23 39.42 6.13
5228 7107 2.521708 CATTTGGGATCCCGGCCC 60.522 66.667 26.03 8.63 46.22 5.80
5233 7112 4.286065 GGGATCCCGGCCCATTCC 62.286 72.222 17.02 4.57 45.31 3.01
5234 7113 4.286065 GGATCCCGGCCCATTCCC 62.286 72.222 0.00 0.00 0.00 3.97
5235 7114 3.178611 GATCCCGGCCCATTCCCT 61.179 66.667 0.00 0.00 0.00 4.20
5236 7115 3.497884 GATCCCGGCCCATTCCCTG 62.498 68.421 0.00 0.00 0.00 4.45
5264 7143 3.538841 CCGCGCGGAAGATATGAC 58.461 61.111 44.86 0.00 37.50 3.06
5265 7144 2.022129 CCGCGCGGAAGATATGACC 61.022 63.158 44.86 0.00 37.50 4.02
5266 7145 2.022129 CGCGCGGAAGATATGACCC 61.022 63.158 24.84 0.00 0.00 4.46
5267 7146 2.022129 GCGCGGAAGATATGACCCG 61.022 63.158 8.83 0.00 44.34 5.28
5268 7147 1.372997 CGCGGAAGATATGACCCGG 60.373 63.158 0.00 0.00 42.02 5.73
5269 7148 1.004918 GCGGAAGATATGACCCGGG 60.005 63.158 22.25 22.25 42.02 5.73
5270 7149 1.004918 CGGAAGATATGACCCGGGC 60.005 63.158 24.08 14.70 38.42 6.13
5271 7150 1.375326 GGAAGATATGACCCGGGCC 59.625 63.158 24.08 11.40 0.00 5.80
5272 7151 1.415672 GGAAGATATGACCCGGGCCA 61.416 60.000 24.08 18.91 0.00 5.36
5273 7152 0.472471 GAAGATATGACCCGGGCCAA 59.528 55.000 24.08 6.61 0.00 4.52
5274 7153 1.073923 GAAGATATGACCCGGGCCAAT 59.926 52.381 24.08 14.57 0.00 3.16
5275 7154 2.038863 AGATATGACCCGGGCCAATA 57.961 50.000 24.08 16.43 0.00 1.90
5276 7155 2.562296 AGATATGACCCGGGCCAATAT 58.438 47.619 24.08 20.50 0.00 1.28
5277 7156 2.919602 AGATATGACCCGGGCCAATATT 59.080 45.455 24.08 2.36 0.00 1.28
5278 7157 3.333680 AGATATGACCCGGGCCAATATTT 59.666 43.478 24.08 13.47 0.00 1.40
5279 7158 1.995376 ATGACCCGGGCCAATATTTC 58.005 50.000 24.08 8.67 0.00 2.17
5280 7159 0.923358 TGACCCGGGCCAATATTTCT 59.077 50.000 24.08 0.00 0.00 2.52
5281 7160 1.318576 GACCCGGGCCAATATTTCTG 58.681 55.000 24.08 0.00 0.00 3.02
5282 7161 0.106217 ACCCGGGCCAATATTTCTGG 60.106 55.000 24.08 0.00 36.99 3.86
5283 7162 0.184933 CCCGGGCCAATATTTCTGGA 59.815 55.000 8.08 0.00 35.85 3.86
5284 7163 1.318576 CCGGGCCAATATTTCTGGAC 58.681 55.000 4.39 0.00 41.79 4.02
5285 7164 1.409521 CCGGGCCAATATTTCTGGACA 60.410 52.381 4.39 0.00 44.67 4.02
5286 7165 2.586425 CGGGCCAATATTTCTGGACAT 58.414 47.619 4.39 0.00 44.67 3.06
5287 7166 2.958355 CGGGCCAATATTTCTGGACATT 59.042 45.455 4.39 0.00 44.67 2.71
5288 7167 3.384467 CGGGCCAATATTTCTGGACATTT 59.616 43.478 4.39 0.00 44.67 2.32
5289 7168 4.696455 GGGCCAATATTTCTGGACATTTG 58.304 43.478 4.39 0.00 44.67 2.32
5290 7169 4.443315 GGGCCAATATTTCTGGACATTTGG 60.443 45.833 4.39 0.00 44.67 3.28
5291 7170 4.405358 GGCCAATATTTCTGGACATTTGGA 59.595 41.667 0.00 0.00 42.14 3.53
5292 7171 5.351458 GCCAATATTTCTGGACATTTGGAC 58.649 41.667 3.11 0.00 35.85 4.02
5293 7172 5.581605 CCAATATTTCTGGACATTTGGACG 58.418 41.667 0.00 0.00 35.85 4.79
5294 7173 4.900635 ATATTTCTGGACATTTGGACGC 57.099 40.909 0.00 0.00 0.00 5.19
5295 7174 2.270352 TTTCTGGACATTTGGACGCT 57.730 45.000 0.00 0.00 0.00 5.07
5296 7175 1.808411 TTCTGGACATTTGGACGCTC 58.192 50.000 0.00 0.00 0.00 5.03
5297 7176 0.389817 TCTGGACATTTGGACGCTCG 60.390 55.000 0.00 0.00 0.00 5.03
5298 7177 1.361668 CTGGACATTTGGACGCTCGG 61.362 60.000 0.00 0.00 0.00 4.63
5299 7178 1.079405 GGACATTTGGACGCTCGGA 60.079 57.895 0.00 0.00 0.00 4.55
5300 7179 1.084370 GGACATTTGGACGCTCGGAG 61.084 60.000 0.00 0.00 0.00 4.63
5301 7180 1.696832 GACATTTGGACGCTCGGAGC 61.697 60.000 19.92 19.92 38.02 4.70
5302 7181 2.125106 ATTTGGACGCTCGGAGCC 60.125 61.111 23.36 10.77 38.18 4.70
5303 7182 2.954684 ATTTGGACGCTCGGAGCCA 61.955 57.895 23.36 13.23 38.18 4.75
5304 7183 3.876589 TTTGGACGCTCGGAGCCAC 62.877 63.158 23.36 16.52 38.18 5.01
5333 7212 4.241555 GGCCCGATCCGCATGACT 62.242 66.667 0.00 0.00 0.00 3.41
5334 7213 2.203070 GCCCGATCCGCATGACTT 60.203 61.111 0.00 0.00 0.00 3.01
5335 7214 2.247437 GCCCGATCCGCATGACTTC 61.247 63.158 0.00 0.00 0.00 3.01
5336 7215 1.595382 CCCGATCCGCATGACTTCC 60.595 63.158 0.00 0.00 0.00 3.46
5337 7216 1.595382 CCGATCCGCATGACTTCCC 60.595 63.158 0.00 0.00 0.00 3.97
5338 7217 1.595382 CGATCCGCATGACTTCCCC 60.595 63.158 0.00 0.00 0.00 4.81
5339 7218 1.595382 GATCCGCATGACTTCCCCG 60.595 63.158 0.00 0.00 0.00 5.73
5340 7219 2.996168 GATCCGCATGACTTCCCCGG 62.996 65.000 0.00 0.00 40.25 5.73
5341 7220 4.856801 CCGCATGACTTCCCCGGG 62.857 72.222 15.80 15.80 35.54 5.73
5342 7221 3.781307 CGCATGACTTCCCCGGGA 61.781 66.667 26.32 0.34 0.00 5.14
5343 7222 2.919043 GCATGACTTCCCCGGGAT 59.081 61.111 26.32 2.29 0.00 3.85
5344 7223 1.754380 CGCATGACTTCCCCGGGATA 61.754 60.000 26.32 6.76 0.00 2.59
5345 7224 0.035458 GCATGACTTCCCCGGGATAG 59.965 60.000 26.32 20.80 0.00 2.08
5346 7225 0.035458 CATGACTTCCCCGGGATAGC 59.965 60.000 26.32 14.34 0.00 2.97
5347 7226 1.472662 ATGACTTCCCCGGGATAGCG 61.473 60.000 26.32 4.25 0.00 4.26
5348 7227 3.516866 GACTTCCCCGGGATAGCGC 62.517 68.421 26.32 10.48 0.00 5.92
5349 7228 3.546543 CTTCCCCGGGATAGCGCA 61.547 66.667 26.32 0.00 0.00 6.09
5350 7229 3.809374 CTTCCCCGGGATAGCGCAC 62.809 68.421 26.32 0.00 0.00 5.34
5376 7255 3.187211 GCGACATCGGGAGAGAATC 57.813 57.895 3.08 0.00 45.48 2.52
5384 7263 4.709690 GGAGAGAATCCCCCGTCT 57.290 61.111 0.00 0.00 43.01 4.18
5385 7264 2.432119 GGAGAGAATCCCCCGTCTC 58.568 63.158 0.00 0.00 43.01 3.36
5386 7265 1.457009 GGAGAGAATCCCCCGTCTCG 61.457 65.000 0.00 0.00 44.18 4.04
5387 7266 2.077821 GAGAGAATCCCCCGTCTCGC 62.078 65.000 0.00 0.00 44.18 5.03
5388 7267 2.042843 AGAATCCCCCGTCTCGCT 60.043 61.111 0.00 0.00 0.00 4.93
5389 7268 2.077821 GAGAATCCCCCGTCTCGCTC 62.078 65.000 0.00 0.00 31.55 5.03
5390 7269 3.486252 GAATCCCCCGTCTCGCTCG 62.486 68.421 0.00 0.00 0.00 5.03
5412 7291 4.803426 CGGCGCCTGTCTCTGACC 62.803 72.222 26.68 0.00 0.00 4.02
5413 7292 3.386237 GGCGCCTGTCTCTGACCT 61.386 66.667 22.15 0.00 0.00 3.85
5414 7293 2.125753 GCGCCTGTCTCTGACCTG 60.126 66.667 0.00 0.00 0.00 4.00
5415 7294 2.125753 CGCCTGTCTCTGACCTGC 60.126 66.667 0.00 0.00 0.00 4.85
5416 7295 2.644212 CGCCTGTCTCTGACCTGCT 61.644 63.158 0.00 0.00 0.00 4.24
5417 7296 1.079266 GCCTGTCTCTGACCTGCTG 60.079 63.158 0.00 0.00 0.00 4.41
5418 7297 1.539560 GCCTGTCTCTGACCTGCTGA 61.540 60.000 0.00 0.00 0.00 4.26
5419 7298 1.193323 CCTGTCTCTGACCTGCTGAT 58.807 55.000 0.00 0.00 0.00 2.90
5420 7299 1.134759 CCTGTCTCTGACCTGCTGATG 60.135 57.143 0.00 0.00 0.00 3.07
5421 7300 0.248565 TGTCTCTGACCTGCTGATGC 59.751 55.000 0.00 0.00 40.20 3.91
5422 7301 0.805322 GTCTCTGACCTGCTGATGCG 60.805 60.000 0.00 0.00 43.34 4.73
5423 7302 0.967380 TCTCTGACCTGCTGATGCGA 60.967 55.000 0.00 0.00 43.34 5.10
5424 7303 0.528033 CTCTGACCTGCTGATGCGAG 60.528 60.000 0.00 0.00 43.34 5.03
5425 7304 1.521010 CTGACCTGCTGATGCGAGG 60.521 63.158 0.00 0.00 43.34 4.63
5426 7305 2.894387 GACCTGCTGATGCGAGGC 60.894 66.667 0.00 0.00 43.34 4.70
5427 7306 4.479993 ACCTGCTGATGCGAGGCC 62.480 66.667 0.00 0.00 43.34 5.19
5444 7323 4.514577 CGCCGCCTCCCTACACTG 62.515 72.222 0.00 0.00 0.00 3.66
5445 7324 4.840005 GCCGCCTCCCTACACTGC 62.840 72.222 0.00 0.00 0.00 4.40
5446 7325 4.162690 CCGCCTCCCTACACTGCC 62.163 72.222 0.00 0.00 0.00 4.85
5447 7326 3.390521 CGCCTCCCTACACTGCCA 61.391 66.667 0.00 0.00 0.00 4.92
5448 7327 2.269241 GCCTCCCTACACTGCCAC 59.731 66.667 0.00 0.00 0.00 5.01
5449 7328 2.579201 CCTCCCTACACTGCCACG 59.421 66.667 0.00 0.00 0.00 4.94
5450 7329 2.125512 CTCCCTACACTGCCACGC 60.126 66.667 0.00 0.00 0.00 5.34
5451 7330 3.665675 CTCCCTACACTGCCACGCC 62.666 68.421 0.00 0.00 0.00 5.68
5452 7331 3.706373 CCCTACACTGCCACGCCT 61.706 66.667 0.00 0.00 0.00 5.52
5453 7332 2.125512 CCTACACTGCCACGCCTC 60.126 66.667 0.00 0.00 0.00 4.70
5454 7333 2.650116 CCTACACTGCCACGCCTCT 61.650 63.158 0.00 0.00 0.00 3.69
5455 7334 1.153745 CTACACTGCCACGCCTCTC 60.154 63.158 0.00 0.00 0.00 3.20
5456 7335 2.564553 CTACACTGCCACGCCTCTCC 62.565 65.000 0.00 0.00 0.00 3.71
5457 7336 3.699894 CACTGCCACGCCTCTCCT 61.700 66.667 0.00 0.00 0.00 3.69
5458 7337 2.925170 ACTGCCACGCCTCTCCTT 60.925 61.111 0.00 0.00 0.00 3.36
5459 7338 2.348998 CTGCCACGCCTCTCCTTT 59.651 61.111 0.00 0.00 0.00 3.11
5460 7339 1.743252 CTGCCACGCCTCTCCTTTC 60.743 63.158 0.00 0.00 0.00 2.62
5461 7340 2.436824 GCCACGCCTCTCCTTTCC 60.437 66.667 0.00 0.00 0.00 3.13
5462 7341 2.960688 GCCACGCCTCTCCTTTCCT 61.961 63.158 0.00 0.00 0.00 3.36
5463 7342 1.219393 CCACGCCTCTCCTTTCCTC 59.781 63.158 0.00 0.00 0.00 3.71
5464 7343 1.219393 CACGCCTCTCCTTTCCTCC 59.781 63.158 0.00 0.00 0.00 4.30
5465 7344 1.079438 ACGCCTCTCCTTTCCTCCT 59.921 57.895 0.00 0.00 0.00 3.69
5466 7345 0.973496 ACGCCTCTCCTTTCCTCCTC 60.973 60.000 0.00 0.00 0.00 3.71
5467 7346 0.972983 CGCCTCTCCTTTCCTCCTCA 60.973 60.000 0.00 0.00 0.00 3.86
5468 7347 1.280457 GCCTCTCCTTTCCTCCTCAA 58.720 55.000 0.00 0.00 0.00 3.02
5469 7348 1.843206 GCCTCTCCTTTCCTCCTCAAT 59.157 52.381 0.00 0.00 0.00 2.57
5470 7349 2.158827 GCCTCTCCTTTCCTCCTCAATC 60.159 54.545 0.00 0.00 0.00 2.67
5471 7350 3.383223 CCTCTCCTTTCCTCCTCAATCT 58.617 50.000 0.00 0.00 0.00 2.40
5472 7351 3.387699 CCTCTCCTTTCCTCCTCAATCTC 59.612 52.174 0.00 0.00 0.00 2.75
5473 7352 3.379452 TCTCCTTTCCTCCTCAATCTCC 58.621 50.000 0.00 0.00 0.00 3.71
5474 7353 3.110705 CTCCTTTCCTCCTCAATCTCCA 58.889 50.000 0.00 0.00 0.00 3.86
5475 7354 2.840651 TCCTTTCCTCCTCAATCTCCAC 59.159 50.000 0.00 0.00 0.00 4.02
5476 7355 2.573462 CCTTTCCTCCTCAATCTCCACA 59.427 50.000 0.00 0.00 0.00 4.17
5477 7356 3.201708 CCTTTCCTCCTCAATCTCCACAT 59.798 47.826 0.00 0.00 0.00 3.21
5478 7357 3.920231 TTCCTCCTCAATCTCCACATG 57.080 47.619 0.00 0.00 0.00 3.21
5479 7358 1.487976 TCCTCCTCAATCTCCACATGC 59.512 52.381 0.00 0.00 0.00 4.06
5480 7359 1.211212 CCTCCTCAATCTCCACATGCA 59.789 52.381 0.00 0.00 0.00 3.96
5481 7360 2.286872 CTCCTCAATCTCCACATGCAC 58.713 52.381 0.00 0.00 0.00 4.57
5482 7361 1.065199 TCCTCAATCTCCACATGCACC 60.065 52.381 0.00 0.00 0.00 5.01
5483 7362 1.064906 CCTCAATCTCCACATGCACCT 60.065 52.381 0.00 0.00 0.00 4.00
5484 7363 2.619849 CCTCAATCTCCACATGCACCTT 60.620 50.000 0.00 0.00 0.00 3.50
5485 7364 2.422479 CTCAATCTCCACATGCACCTTG 59.578 50.000 0.00 0.00 0.00 3.61
5486 7365 2.165167 CAATCTCCACATGCACCTTGT 58.835 47.619 0.00 0.00 0.00 3.16
5487 7366 3.008923 TCAATCTCCACATGCACCTTGTA 59.991 43.478 0.00 0.00 0.00 2.41
5488 7367 2.472695 TCTCCACATGCACCTTGTAC 57.527 50.000 0.00 0.00 0.00 2.90
5489 7368 1.977854 TCTCCACATGCACCTTGTACT 59.022 47.619 0.00 0.00 0.00 2.73
5490 7369 2.028112 TCTCCACATGCACCTTGTACTC 60.028 50.000 0.00 0.00 0.00 2.59
5491 7370 1.696884 TCCACATGCACCTTGTACTCA 59.303 47.619 0.00 0.00 0.00 3.41
5492 7371 1.806542 CCACATGCACCTTGTACTCAC 59.193 52.381 0.00 0.00 0.00 3.51
5493 7372 2.493035 CACATGCACCTTGTACTCACA 58.507 47.619 0.00 0.00 0.00 3.58
5494 7373 2.224079 CACATGCACCTTGTACTCACAC 59.776 50.000 0.00 0.00 33.30 3.82
5495 7374 1.806542 CATGCACCTTGTACTCACACC 59.193 52.381 0.00 0.00 33.30 4.16
5496 7375 1.128200 TGCACCTTGTACTCACACCT 58.872 50.000 0.00 0.00 33.30 4.00
5497 7376 1.070134 TGCACCTTGTACTCACACCTC 59.930 52.381 0.00 0.00 33.30 3.85
5498 7377 1.608283 GCACCTTGTACTCACACCTCC 60.608 57.143 0.00 0.00 33.30 4.30
5499 7378 0.966920 ACCTTGTACTCACACCTCCG 59.033 55.000 0.00 0.00 33.30 4.63
5500 7379 0.389948 CCTTGTACTCACACCTCCGC 60.390 60.000 0.00 0.00 33.30 5.54
5501 7380 0.389948 CTTGTACTCACACCTCCGCC 60.390 60.000 0.00 0.00 33.30 6.13
5502 7381 0.830444 TTGTACTCACACCTCCGCCT 60.830 55.000 0.00 0.00 33.30 5.52
5503 7382 1.248785 TGTACTCACACCTCCGCCTC 61.249 60.000 0.00 0.00 0.00 4.70
5504 7383 1.681327 TACTCACACCTCCGCCTCC 60.681 63.158 0.00 0.00 0.00 4.30
5505 7384 2.435120 TACTCACACCTCCGCCTCCA 62.435 60.000 0.00 0.00 0.00 3.86
5506 7385 2.284625 TCACACCTCCGCCTCCAT 60.285 61.111 0.00 0.00 0.00 3.41
5507 7386 2.187946 CACACCTCCGCCTCCATC 59.812 66.667 0.00 0.00 0.00 3.51
5508 7387 3.083997 ACACCTCCGCCTCCATCC 61.084 66.667 0.00 0.00 0.00 3.51
5509 7388 2.765807 CACCTCCGCCTCCATCCT 60.766 66.667 0.00 0.00 0.00 3.24
5510 7389 2.444895 ACCTCCGCCTCCATCCTC 60.445 66.667 0.00 0.00 0.00 3.71
5511 7390 2.444706 CCTCCGCCTCCATCCTCA 60.445 66.667 0.00 0.00 0.00 3.86
5512 7391 2.801631 CCTCCGCCTCCATCCTCAC 61.802 68.421 0.00 0.00 0.00 3.51
5513 7392 2.764128 TCCGCCTCCATCCTCACC 60.764 66.667 0.00 0.00 0.00 4.02
5514 7393 4.227134 CCGCCTCCATCCTCACCG 62.227 72.222 0.00 0.00 0.00 4.94
5515 7394 4.227134 CGCCTCCATCCTCACCGG 62.227 72.222 0.00 0.00 0.00 5.28
5516 7395 4.554036 GCCTCCATCCTCACCGGC 62.554 72.222 0.00 0.00 0.00 6.13
5517 7396 4.227134 CCTCCATCCTCACCGGCG 62.227 72.222 0.00 0.00 0.00 6.46
5518 7397 4.227134 CTCCATCCTCACCGGCGG 62.227 72.222 27.06 27.06 0.00 6.13
5536 7415 4.439472 CCGCCGCTGCAAACGTAC 62.439 66.667 0.00 0.00 37.32 3.67
5537 7416 4.439472 CGCCGCTGCAAACGTACC 62.439 66.667 0.00 0.00 37.32 3.34
5538 7417 3.047877 GCCGCTGCAAACGTACCT 61.048 61.111 7.88 0.00 37.47 3.08
5539 7418 1.738830 GCCGCTGCAAACGTACCTA 60.739 57.895 7.88 0.00 37.47 3.08
5540 7419 1.963190 GCCGCTGCAAACGTACCTAC 61.963 60.000 7.88 0.00 37.47 3.18
5541 7420 1.356527 CCGCTGCAAACGTACCTACC 61.357 60.000 7.88 0.00 0.00 3.18
5542 7421 0.668096 CGCTGCAAACGTACCTACCA 60.668 55.000 0.00 0.00 0.00 3.25
5543 7422 1.076332 GCTGCAAACGTACCTACCAG 58.924 55.000 0.00 0.00 0.00 4.00
5544 7423 1.607251 GCTGCAAACGTACCTACCAGT 60.607 52.381 0.00 0.00 0.00 4.00
5545 7424 2.353011 GCTGCAAACGTACCTACCAGTA 60.353 50.000 0.00 0.00 0.00 2.74
5546 7425 3.508762 CTGCAAACGTACCTACCAGTAG 58.491 50.000 0.00 0.00 0.00 2.57
5568 7447 2.366469 GAGTTCTCTCCTGCCCACA 58.634 57.895 0.00 0.00 34.87 4.17
5569 7448 0.687354 GAGTTCTCTCCTGCCCACAA 59.313 55.000 0.00 0.00 34.87 3.33
5570 7449 0.689623 AGTTCTCTCCTGCCCACAAG 59.310 55.000 0.00 0.00 0.00 3.16
5571 7450 0.398318 GTTCTCTCCTGCCCACAAGT 59.602 55.000 0.00 0.00 0.00 3.16
5572 7451 0.397941 TTCTCTCCTGCCCACAAGTG 59.602 55.000 0.00 0.00 0.00 3.16
5573 7452 0.471780 TCTCTCCTGCCCACAAGTGA 60.472 55.000 0.94 0.00 0.00 3.41
5574 7453 0.036577 CTCTCCTGCCCACAAGTGAG 60.037 60.000 0.94 0.00 0.00 3.51
5575 7454 1.002868 CTCCTGCCCACAAGTGAGG 60.003 63.158 0.94 1.07 0.00 3.86
5576 7455 2.674380 CCTGCCCACAAGTGAGGC 60.674 66.667 19.37 19.37 43.01 4.70
5577 7456 2.433446 CTGCCCACAAGTGAGGCT 59.567 61.111 23.60 0.00 43.07 4.58
5578 7457 1.970114 CTGCCCACAAGTGAGGCTG 60.970 63.158 23.60 20.69 43.07 4.85
5579 7458 3.368571 GCCCACAAGTGAGGCTGC 61.369 66.667 19.08 0.00 41.01 5.25
5580 7459 2.674380 CCCACAAGTGAGGCTGCC 60.674 66.667 11.65 11.65 0.00 4.85
5581 7460 3.052082 CCACAAGTGAGGCTGCCG 61.052 66.667 13.96 0.00 0.00 5.69
5582 7461 3.052082 CACAAGTGAGGCTGCCGG 61.052 66.667 13.96 0.00 0.00 6.13
5589 7468 4.615815 GAGGCTGCCGGCGATGAT 62.616 66.667 23.90 6.29 42.94 2.45
5590 7469 4.923942 AGGCTGCCGGCGATGATG 62.924 66.667 23.90 8.41 42.94 3.07
5591 7470 4.916293 GGCTGCCGGCGATGATGA 62.916 66.667 23.90 0.00 42.94 2.92
5592 7471 3.643978 GCTGCCGGCGATGATGAC 61.644 66.667 23.90 0.17 0.00 3.06
5593 7472 2.107750 CTGCCGGCGATGATGACT 59.892 61.111 23.90 0.00 0.00 3.41
5594 7473 2.202919 TGCCGGCGATGATGACTG 60.203 61.111 23.90 0.00 0.00 3.51
5595 7474 2.969238 GCCGGCGATGATGACTGG 60.969 66.667 12.58 0.00 0.00 4.00
5596 7475 2.501128 CCGGCGATGATGACTGGT 59.499 61.111 9.30 0.00 0.00 4.00
5597 7476 1.884464 CCGGCGATGATGACTGGTG 60.884 63.158 9.30 0.00 0.00 4.17
5598 7477 1.884464 CGGCGATGATGACTGGTGG 60.884 63.158 0.00 0.00 0.00 4.61
5599 7478 1.221840 GGCGATGATGACTGGTGGT 59.778 57.895 0.00 0.00 0.00 4.16
5600 7479 1.091771 GGCGATGATGACTGGTGGTG 61.092 60.000 0.00 0.00 0.00 4.17
5601 7480 1.091771 GCGATGATGACTGGTGGTGG 61.092 60.000 0.00 0.00 0.00 4.61
5602 7481 0.250234 CGATGATGACTGGTGGTGGT 59.750 55.000 0.00 0.00 0.00 4.16
5603 7482 1.742761 GATGATGACTGGTGGTGGTG 58.257 55.000 0.00 0.00 0.00 4.17
5604 7483 0.329261 ATGATGACTGGTGGTGGTGG 59.671 55.000 0.00 0.00 0.00 4.61
5605 7484 1.059584 TGATGACTGGTGGTGGTGGT 61.060 55.000 0.00 0.00 0.00 4.16
5606 7485 0.606401 GATGACTGGTGGTGGTGGTG 60.606 60.000 0.00 0.00 0.00 4.17
5607 7486 2.067932 ATGACTGGTGGTGGTGGTGG 62.068 60.000 0.00 0.00 0.00 4.61
5608 7487 2.694616 ACTGGTGGTGGTGGTGGT 60.695 61.111 0.00 0.00 0.00 4.16
5609 7488 2.203337 CTGGTGGTGGTGGTGGTG 60.203 66.667 0.00 0.00 0.00 4.17
5610 7489 3.790416 CTGGTGGTGGTGGTGGTGG 62.790 68.421 0.00 0.00 0.00 4.61
5614 7493 4.299796 GGTGGTGGTGGTGGCCAT 62.300 66.667 9.72 0.00 41.08 4.40
5615 7494 2.990967 GTGGTGGTGGTGGCCATG 60.991 66.667 9.72 0.00 41.08 3.66
5616 7495 3.181530 TGGTGGTGGTGGCCATGA 61.182 61.111 9.72 0.00 41.08 3.07
5617 7496 2.117206 GGTGGTGGTGGCCATGAA 59.883 61.111 9.72 0.00 41.08 2.57
5618 7497 1.978617 GGTGGTGGTGGCCATGAAG 60.979 63.158 9.72 0.00 41.08 3.02
5619 7498 1.074775 GTGGTGGTGGCCATGAAGA 59.925 57.895 9.72 0.00 41.08 2.87
5620 7499 1.074775 TGGTGGTGGCCATGAAGAC 59.925 57.895 9.72 1.03 35.28 3.01
5621 7500 2.040544 GGTGGTGGCCATGAAGACG 61.041 63.158 9.72 0.00 35.28 4.18
5622 7501 2.040544 GTGGTGGCCATGAAGACGG 61.041 63.158 9.72 0.00 35.28 4.79
5623 7502 2.438434 GGTGGCCATGAAGACGGG 60.438 66.667 9.72 0.00 0.00 5.28
5624 7503 2.438434 GTGGCCATGAAGACGGGG 60.438 66.667 9.72 0.00 0.00 5.73
5625 7504 2.609299 TGGCCATGAAGACGGGGA 60.609 61.111 0.00 0.00 0.00 4.81
5626 7505 2.000701 TGGCCATGAAGACGGGGAT 61.001 57.895 0.00 0.00 0.00 3.85
5627 7506 1.526917 GGCCATGAAGACGGGGATG 60.527 63.158 0.00 0.00 0.00 3.51
5628 7507 2.189499 GCCATGAAGACGGGGATGC 61.189 63.158 0.00 0.00 0.00 3.91
5629 7508 1.224315 CCATGAAGACGGGGATGCA 59.776 57.895 0.00 0.00 0.00 3.96
5630 7509 0.816825 CCATGAAGACGGGGATGCAG 60.817 60.000 0.00 0.00 0.00 4.41
5631 7510 0.816825 CATGAAGACGGGGATGCAGG 60.817 60.000 0.00 0.00 0.00 4.85
5632 7511 1.274703 ATGAAGACGGGGATGCAGGT 61.275 55.000 0.00 0.00 0.00 4.00
5633 7512 1.153349 GAAGACGGGGATGCAGGTC 60.153 63.158 0.00 0.00 0.00 3.85
5634 7513 2.595009 GAAGACGGGGATGCAGGTCC 62.595 65.000 0.00 0.00 37.56 4.46
5635 7514 3.399181 GACGGGGATGCAGGTCCA 61.399 66.667 8.58 0.00 40.17 4.02
5636 7515 2.933287 ACGGGGATGCAGGTCCAA 60.933 61.111 8.58 0.00 40.17 3.53
5637 7516 2.354729 CGGGGATGCAGGTCCAAA 59.645 61.111 8.58 0.00 40.17 3.28
5638 7517 1.750399 CGGGGATGCAGGTCCAAAG 60.750 63.158 8.58 0.00 40.17 2.77
5639 7518 1.380380 GGGGATGCAGGTCCAAAGG 60.380 63.158 8.58 0.00 40.17 3.11
5640 7519 1.380380 GGGATGCAGGTCCAAAGGG 60.380 63.158 8.58 0.00 40.17 3.95
5641 7520 1.380380 GGATGCAGGTCCAAAGGGG 60.380 63.158 1.24 0.00 38.20 4.79
5642 7521 1.380380 GATGCAGGTCCAAAGGGGG 60.380 63.158 0.00 0.00 37.22 5.40
5643 7522 3.607084 ATGCAGGTCCAAAGGGGGC 62.607 63.158 0.00 0.00 42.12 5.80
5644 7523 3.984732 GCAGGTCCAAAGGGGGCT 61.985 66.667 0.00 0.00 42.62 5.19
5645 7524 2.356667 CAGGTCCAAAGGGGGCTC 59.643 66.667 0.00 0.00 42.62 4.70
5646 7525 2.121506 AGGTCCAAAGGGGGCTCA 60.122 61.111 0.00 0.00 42.62 4.26
5647 7526 2.035783 GGTCCAAAGGGGGCTCAC 59.964 66.667 0.00 0.00 42.62 3.51
5648 7527 2.035783 GTCCAAAGGGGGCTCACC 59.964 66.667 0.00 0.00 38.65 4.02
5649 7528 3.646715 TCCAAAGGGGGCTCACCG 61.647 66.667 0.00 0.00 41.60 4.94
5650 7529 3.646715 CCAAAGGGGGCTCACCGA 61.647 66.667 0.00 0.00 41.60 4.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 116 5.431420 TTGTGATGATGCTAACGTTGTTT 57.569 34.783 11.99 0.00 0.00 2.83
225 226 8.101654 TGTACTAACAAAGTTCACTGTTTTGT 57.898 30.769 3.21 3.21 44.39 2.83
238 239 7.426929 ACAGCTCAGAAATGTACTAACAAAG 57.573 36.000 0.00 0.00 39.58 2.77
316 317 4.069232 CGAGGCAACGCTCCAGGA 62.069 66.667 0.00 0.00 46.39 3.86
354 370 6.459298 GCGGATGAAAGATCAATTGAATCACT 60.459 38.462 13.09 7.06 39.49 3.41
377 400 1.387084 GTCACTGCGACTTCTTTAGCG 59.613 52.381 0.00 0.00 41.81 4.26
390 413 2.046892 ATCTGCACCGGTCACTGC 60.047 61.111 2.59 5.84 0.00 4.40
425 449 7.223582 TCGCAAGCAGATTTTAAATTTGAAACA 59.776 29.630 10.00 0.00 37.18 2.83
433 457 7.196331 GGTCTATTCGCAAGCAGATTTTAAAT 58.804 34.615 0.00 0.00 37.18 1.40
511 536 8.470939 ACTATACTCCCCTAACCTAATAACCAT 58.529 37.037 0.00 0.00 0.00 3.55
539 564 6.657541 AGAGCCCAACGTGATATAAAAGAAAA 59.342 34.615 0.00 0.00 0.00 2.29
540 565 6.177610 AGAGCCCAACGTGATATAAAAGAAA 58.822 36.000 0.00 0.00 0.00 2.52
541 566 5.741011 AGAGCCCAACGTGATATAAAAGAA 58.259 37.500 0.00 0.00 0.00 2.52
542 567 5.353394 AGAGCCCAACGTGATATAAAAGA 57.647 39.130 0.00 0.00 0.00 2.52
543 568 6.436843 AAAGAGCCCAACGTGATATAAAAG 57.563 37.500 0.00 0.00 0.00 2.27
544 569 6.616947 CAAAAGAGCCCAACGTGATATAAAA 58.383 36.000 0.00 0.00 0.00 1.52
546 571 4.095782 GCAAAAGAGCCCAACGTGATATAA 59.904 41.667 0.00 0.00 0.00 0.98
547 572 3.625764 GCAAAAGAGCCCAACGTGATATA 59.374 43.478 0.00 0.00 0.00 0.86
548 573 2.423538 GCAAAAGAGCCCAACGTGATAT 59.576 45.455 0.00 0.00 0.00 1.63
550 575 0.598065 GCAAAAGAGCCCAACGTGAT 59.402 50.000 0.00 0.00 0.00 3.06
551 576 0.749818 TGCAAAAGAGCCCAACGTGA 60.750 50.000 0.00 0.00 0.00 4.35
554 579 0.385390 ACTTGCAAAAGAGCCCAACG 59.615 50.000 0.00 0.00 0.00 4.10
555 580 3.726291 TTACTTGCAAAAGAGCCCAAC 57.274 42.857 0.00 0.00 0.00 3.77
556 581 4.953940 ATTTACTTGCAAAAGAGCCCAA 57.046 36.364 0.00 0.00 0.00 4.12
591 618 0.243907 TTGCCGACTGAGCTACACTC 59.756 55.000 0.00 0.00 46.45 3.51
593 620 0.737715 CCTTGCCGACTGAGCTACAC 60.738 60.000 0.00 0.00 0.00 2.90
596 623 2.579201 GCCTTGCCGACTGAGCTA 59.421 61.111 0.00 0.00 0.00 3.32
597 624 4.749310 CGCCTTGCCGACTGAGCT 62.749 66.667 0.00 0.00 0.00 4.09
633 660 1.406069 CCGAGACTTGAACCCTGATGG 60.406 57.143 0.00 0.00 41.37 3.51
634 661 2.009042 GCCGAGACTTGAACCCTGATG 61.009 57.143 0.00 0.00 0.00 3.07
635 662 0.250513 GCCGAGACTTGAACCCTGAT 59.749 55.000 0.00 0.00 0.00 2.90
636 663 0.832135 AGCCGAGACTTGAACCCTGA 60.832 55.000 0.00 0.00 0.00 3.86
637 664 0.035458 AAGCCGAGACTTGAACCCTG 59.965 55.000 0.00 0.00 0.00 4.45
638 665 2.453242 AAGCCGAGACTTGAACCCT 58.547 52.632 0.00 0.00 0.00 4.34
644 671 1.621301 CGCACTCAAGCCGAGACTTG 61.621 60.000 7.71 6.49 45.45 3.16
645 672 1.373497 CGCACTCAAGCCGAGACTT 60.373 57.895 7.71 0.00 45.45 3.01
646 673 2.259818 CGCACTCAAGCCGAGACT 59.740 61.111 7.71 0.00 45.45 3.24
647 674 2.049063 ACGCACTCAAGCCGAGAC 60.049 61.111 7.71 0.00 45.45 3.36
648 675 2.049156 CACGCACTCAAGCCGAGA 60.049 61.111 7.71 0.00 45.45 4.04
650 677 3.923864 ACCACGCACTCAAGCCGA 61.924 61.111 0.00 0.00 0.00 5.54
651 678 3.716006 CACCACGCACTCAAGCCG 61.716 66.667 0.00 0.00 0.00 5.52
652 679 4.030452 GCACCACGCACTCAAGCC 62.030 66.667 0.00 0.00 41.79 4.35
653 680 2.959357 GAGCACCACGCACTCAAGC 61.959 63.158 0.00 0.00 46.13 4.01
654 681 1.595109 TGAGCACCACGCACTCAAG 60.595 57.895 0.00 0.00 46.13 3.02
655 682 1.887242 GTGAGCACCACGCACTCAA 60.887 57.895 0.00 0.00 44.81 3.02
656 683 2.280119 GTGAGCACCACGCACTCA 60.280 61.111 0.00 0.00 44.81 3.41
663 690 0.586802 GAAAACTCCGTGAGCACCAC 59.413 55.000 1.36 0.00 42.30 4.16
664 691 0.468226 AGAAAACTCCGTGAGCACCA 59.532 50.000 1.36 0.00 32.04 4.17
665 692 1.531578 GAAGAAAACTCCGTGAGCACC 59.468 52.381 1.36 0.00 32.04 5.01
666 693 2.484889 AGAAGAAAACTCCGTGAGCAC 58.515 47.619 1.36 0.00 32.04 4.40
667 694 2.910688 AGAAGAAAACTCCGTGAGCA 57.089 45.000 1.36 0.00 32.04 4.26
668 695 6.963049 TTTATAGAAGAAAACTCCGTGAGC 57.037 37.500 1.36 0.00 32.04 4.26
707 734 0.686769 ACCAACCCGGGCTAGACTAG 60.687 60.000 24.08 5.03 40.22 2.57
708 735 0.685458 GACCAACCCGGGCTAGACTA 60.685 60.000 24.08 0.00 41.26 2.59
709 736 1.988406 GACCAACCCGGGCTAGACT 60.988 63.158 24.08 0.00 41.26 3.24
710 737 2.582978 GACCAACCCGGGCTAGAC 59.417 66.667 24.08 5.60 41.26 2.59
716 743 2.815384 AAAAAGTGACCAACCCGGG 58.185 52.632 22.25 22.25 40.22 5.73
753 780 6.474140 AAACCTTCCACGGAATAACTTTTT 57.526 33.333 0.00 0.00 33.28 1.94
754 781 6.080648 GAAACCTTCCACGGAATAACTTTT 57.919 37.500 0.00 0.00 33.28 2.27
755 782 5.700722 GAAACCTTCCACGGAATAACTTT 57.299 39.130 0.00 0.00 33.28 2.66
816 2502 2.079020 AACTCCCGAACGAACGCTCA 62.079 55.000 0.00 0.00 0.00 4.26
870 2556 1.295357 TATTGCGTGCAACCCGACTG 61.295 55.000 9.79 0.00 38.88 3.51
871 2557 0.392461 ATATTGCGTGCAACCCGACT 60.392 50.000 9.79 0.00 38.88 4.18
875 2561 1.298339 GCGATATTGCGTGCAACCC 60.298 57.895 9.79 1.45 38.88 4.11
1231 2923 0.983378 GCATGTGAGAGGTAGGGGGT 60.983 60.000 0.00 0.00 0.00 4.95
1362 3056 3.329889 TGGTGCTTGGGCTCGGAT 61.330 61.111 0.00 0.00 39.59 4.18
1599 3293 0.179124 TGTTTGAACAAGTTGCCCGC 60.179 50.000 1.81 0.00 35.67 6.13
1765 3462 2.764128 ATCCCATGCCGTCCTCGT 60.764 61.111 0.00 0.00 35.01 4.18
1876 3573 0.620556 TCTGGAGGAATGGAGGTTGC 59.379 55.000 0.00 0.00 0.00 4.17
1930 3627 1.039856 AAGGCAAATTCAGCACGGTT 58.960 45.000 5.36 0.00 0.00 4.44
1946 3643 1.247567 AAGGTGTTCGATGCCAAAGG 58.752 50.000 0.00 0.00 0.00 3.11
2161 3860 6.250344 TCTCATCAAGATTGCTTTTGACAG 57.750 37.500 0.00 0.00 36.26 3.51
2212 3911 5.877564 AGCTAGACCTGTAAAAAGATTCAGC 59.122 40.000 0.00 0.00 0.00 4.26
2302 4001 2.124320 GCAAATCCGCTAGCCCCA 60.124 61.111 9.66 0.00 0.00 4.96
2329 4028 2.256591 GGTGTGTCCAGCAGCAGTG 61.257 63.158 0.00 0.00 38.94 3.66
2523 4222 7.149063 GCTTTGAACTCGAATTCTTTCACATTC 60.149 37.037 8.23 4.10 0.00 2.67
2676 4375 6.951971 AGCTCACTAAAGTGGTGATCTAAAT 58.048 36.000 10.11 0.00 45.65 1.40
2722 4428 1.072266 ACAGCATTGTACCCCCTCAA 58.928 50.000 0.00 0.00 35.25 3.02
2723 4429 1.072266 AACAGCATTGTACCCCCTCA 58.928 50.000 0.00 0.00 36.23 3.86
2729 4435 7.843490 TCTTATCAGTAAACAGCATTGTACC 57.157 36.000 0.00 0.00 36.23 3.34
2783 4490 2.125391 CTGCTAGGCGCTGCAAGA 60.125 61.111 19.54 2.97 38.81 3.02
3335 5056 1.059692 CTTAACACAGTCTGCATCGCG 59.940 52.381 0.00 0.00 0.00 5.87
3473 5194 3.197983 ACGCAGGCTAAGTTAGAAAGGAT 59.802 43.478 14.27 0.00 0.00 3.24
3850 5579 2.621763 GCTCCAAGCGGTCCATATG 58.378 57.895 0.00 0.00 0.00 1.78
3931 5660 0.740737 ATTGGCAGACATTTAGCGCC 59.259 50.000 2.29 0.00 43.28 6.53
3945 5674 8.682710 TGAATAAACAACTAACTCCATATTGGC 58.317 33.333 0.00 0.00 37.47 4.52
4082 5812 5.280727 CCTGGGAGAAGAAGGTCAATAACTT 60.281 44.000 0.00 0.00 0.00 2.66
4085 5815 4.435137 TCCTGGGAGAAGAAGGTCAATAA 58.565 43.478 0.00 0.00 32.59 1.40
4105 5838 0.391228 AACCATTGGTTGCGGTTTCC 59.609 50.000 20.21 0.00 45.07 3.13
4116 5849 8.469309 AGGATTTCACATATAAGAACCATTGG 57.531 34.615 0.00 0.00 0.00 3.16
4119 5852 9.561069 GTGTAGGATTTCACATATAAGAACCAT 57.439 33.333 0.00 0.00 35.04 3.55
4122 5855 8.552034 GCTGTGTAGGATTTCACATATAAGAAC 58.448 37.037 0.00 0.00 42.42 3.01
4124 5857 7.928167 CAGCTGTGTAGGATTTCACATATAAGA 59.072 37.037 5.25 0.00 42.42 2.10
4125 5858 7.928167 TCAGCTGTGTAGGATTTCACATATAAG 59.072 37.037 14.67 0.00 42.42 1.73
4127 5860 7.360113 TCAGCTGTGTAGGATTTCACATATA 57.640 36.000 14.67 0.00 42.42 0.86
4128 5861 6.239217 TCAGCTGTGTAGGATTTCACATAT 57.761 37.500 14.67 0.00 42.42 1.78
4165 5953 4.384098 CCTTCCAGCAACCATCTACACATA 60.384 45.833 0.00 0.00 0.00 2.29
4171 5959 1.289160 AGCCTTCCAGCAACCATCTA 58.711 50.000 0.00 0.00 34.23 1.98
4280 6068 2.897969 GGTTTTTCCCCCTCTCTTTTCC 59.102 50.000 0.00 0.00 0.00 3.13
4295 6086 0.251341 ATGCAGAGGCCGAGGTTTTT 60.251 50.000 0.00 0.00 40.13 1.94
4319 6110 4.827087 AGAGGGCTGCGTGCATCG 62.827 66.667 0.00 0.00 45.15 3.84
4340 6131 1.203523 AGAGGCTAGTTTGTCAGAGCG 59.796 52.381 0.00 0.00 35.71 5.03
4401 6192 2.222013 AACTCCGGGGACTTGGACC 61.222 63.158 9.33 0.00 0.00 4.46
4544 6347 0.467384 CTGCATGAGTCCCAGGTAGG 59.533 60.000 0.00 0.00 35.99 3.18
4545 6348 0.179062 GCTGCATGAGTCCCAGGTAG 60.179 60.000 0.00 0.00 41.25 3.18
4546 6349 0.909133 TGCTGCATGAGTCCCAGGTA 60.909 55.000 0.00 0.00 0.00 3.08
4762 6566 5.105187 GGATAAAACGGACTACAAGTACCCT 60.105 44.000 0.00 0.00 0.00 4.34
4777 6581 6.851222 ATGCTGAGACTTATGGATAAAACG 57.149 37.500 0.00 0.00 0.00 3.60
4792 6596 8.795513 TCAAACATTTCTATGAAAATGCTGAGA 58.204 29.630 12.15 5.61 46.09 3.27
4793 6597 8.857216 GTCAAACATTTCTATGAAAATGCTGAG 58.143 33.333 12.15 4.00 46.09 3.35
4803 6659 7.899178 TTTCGCTAGTCAAACATTTCTATGA 57.101 32.000 0.00 0.00 35.65 2.15
4811 6667 6.675486 GCATGTGTATTTCGCTAGTCAAACAT 60.675 38.462 0.00 0.00 0.00 2.71
4898 6754 1.926561 TGCGATCCGATCTTGAGTTG 58.073 50.000 6.81 0.00 0.00 3.16
4910 6766 1.463674 AACCACAAGGAATGCGATCC 58.536 50.000 0.00 0.00 39.96 3.36
4942 6821 3.494223 CCCACCCAATTTTCAAACCTGAC 60.494 47.826 0.00 0.00 0.00 3.51
4945 6824 2.770447 ACCCACCCAATTTTCAAACCT 58.230 42.857 0.00 0.00 0.00 3.50
4954 6833 1.203162 TCATGCTCAACCCACCCAATT 60.203 47.619 0.00 0.00 0.00 2.32
4958 6837 0.038166 TTCTCATGCTCAACCCACCC 59.962 55.000 0.00 0.00 0.00 4.61
4978 6857 2.513753 CAGCCATACAGGGACAAACAA 58.486 47.619 0.00 0.00 38.09 2.83
4980 6859 0.811281 GCAGCCATACAGGGACAAAC 59.189 55.000 0.00 0.00 38.09 2.93
4995 6874 1.334869 GTATAATGTGTGGGCTGCAGC 59.665 52.381 30.88 30.88 41.14 5.25
4998 6877 2.917933 TCTGTATAATGTGTGGGCTGC 58.082 47.619 0.00 0.00 0.00 5.25
5002 6881 4.883585 AGCAACATCTGTATAATGTGTGGG 59.116 41.667 0.00 0.00 37.42 4.61
5006 6885 7.928167 TCCTCTTAGCAACATCTGTATAATGTG 59.072 37.037 0.00 0.00 37.42 3.21
5025 6904 9.857656 ATCTTCAATTTAGCATCAATCCTCTTA 57.142 29.630 0.00 0.00 0.00 2.10
5071 6950 4.016444 GCAAATAAAGACCTGACCCATGA 58.984 43.478 0.00 0.00 0.00 3.07
5095 6974 5.071519 TGGCATCAAAATTTTCCTCCTTCAA 59.928 36.000 0.00 0.00 0.00 2.69
5098 6977 5.565455 TTGGCATCAAAATTTTCCTCCTT 57.435 34.783 0.00 0.00 0.00 3.36
5157 7036 3.831911 GACAAGAGGGGGATAGATCTCTG 59.168 52.174 0.00 0.00 36.78 3.35
5192 7071 7.364585 CCCAAATGAGCCCAATGTTCTATTAAA 60.365 37.037 0.00 0.00 0.00 1.52
5207 7086 1.529244 CCGGGATCCCAAATGAGCC 60.529 63.158 30.42 0.00 40.14 4.70
5208 7087 2.196245 GCCGGGATCCCAAATGAGC 61.196 63.158 30.42 17.50 35.37 4.26
5209 7088 1.529244 GGCCGGGATCCCAAATGAG 60.529 63.158 30.42 12.66 35.37 2.90
5210 7089 2.600731 GGCCGGGATCCCAAATGA 59.399 61.111 30.42 0.00 35.37 2.57
5211 7090 2.521708 GGGCCGGGATCCCAAATG 60.522 66.667 30.42 15.84 43.37 2.32
5216 7095 4.286065 GGAATGGGCCGGGATCCC 62.286 72.222 22.12 22.12 44.17 3.85
5217 7096 4.286065 GGGAATGGGCCGGGATCC 62.286 72.222 1.92 1.92 0.00 3.36
5218 7097 3.178611 AGGGAATGGGCCGGGATC 61.179 66.667 2.18 0.00 0.00 3.36
5219 7098 3.501911 CAGGGAATGGGCCGGGAT 61.502 66.667 2.18 0.00 0.00 3.85
5242 7121 3.785189 TATCTTCCGCGCGGGCTTC 62.785 63.158 44.95 0.00 36.88 3.86
5243 7122 3.165160 ATATCTTCCGCGCGGGCTT 62.165 57.895 44.95 29.14 36.88 4.35
5244 7123 3.616721 ATATCTTCCGCGCGGGCT 61.617 61.111 44.95 28.67 36.88 5.19
5245 7124 3.414700 CATATCTTCCGCGCGGGC 61.415 66.667 44.95 15.47 34.94 6.13
5246 7125 2.022129 GTCATATCTTCCGCGCGGG 61.022 63.158 44.95 31.39 35.59 6.13
5247 7126 2.022129 GGTCATATCTTCCGCGCGG 61.022 63.158 42.13 42.13 0.00 6.46
5248 7127 2.022129 GGGTCATATCTTCCGCGCG 61.022 63.158 25.67 25.67 0.00 6.86
5249 7128 2.022129 CGGGTCATATCTTCCGCGC 61.022 63.158 0.00 0.00 35.95 6.86
5250 7129 1.372997 CCGGGTCATATCTTCCGCG 60.373 63.158 0.00 0.00 41.02 6.46
5251 7130 1.004918 CCCGGGTCATATCTTCCGC 60.005 63.158 14.18 0.00 41.02 5.54
5252 7131 1.004918 GCCCGGGTCATATCTTCCG 60.005 63.158 24.63 0.00 41.90 4.30
5253 7132 1.375326 GGCCCGGGTCATATCTTCC 59.625 63.158 23.50 6.17 0.00 3.46
5254 7133 0.472471 TTGGCCCGGGTCATATCTTC 59.528 55.000 32.19 4.16 0.00 2.87
5255 7134 1.149101 ATTGGCCCGGGTCATATCTT 58.851 50.000 32.19 8.97 0.00 2.40
5256 7135 2.038863 TATTGGCCCGGGTCATATCT 57.961 50.000 32.19 16.50 0.00 1.98
5257 7136 3.366052 AATATTGGCCCGGGTCATATC 57.634 47.619 32.19 6.84 0.00 1.63
5258 7137 3.333680 AGAAATATTGGCCCGGGTCATAT 59.666 43.478 32.19 25.34 0.00 1.78
5259 7138 2.714250 AGAAATATTGGCCCGGGTCATA 59.286 45.455 32.19 22.53 0.00 2.15
5260 7139 1.499007 AGAAATATTGGCCCGGGTCAT 59.501 47.619 32.19 21.05 0.00 3.06
5261 7140 0.923358 AGAAATATTGGCCCGGGTCA 59.077 50.000 27.82 27.82 0.00 4.02
5262 7141 1.318576 CAGAAATATTGGCCCGGGTC 58.681 55.000 21.35 21.35 0.00 4.46
5263 7142 0.106217 CCAGAAATATTGGCCCGGGT 60.106 55.000 24.63 4.02 0.00 5.28
5264 7143 0.184933 TCCAGAAATATTGGCCCGGG 59.815 55.000 19.09 19.09 35.62 5.73
5265 7144 1.318576 GTCCAGAAATATTGGCCCGG 58.681 55.000 0.00 0.00 35.62 5.73
5266 7145 2.051334 TGTCCAGAAATATTGGCCCG 57.949 50.000 0.00 0.00 35.62 6.13
5267 7146 4.443315 CCAAATGTCCAGAAATATTGGCCC 60.443 45.833 0.00 0.00 35.62 5.80
5268 7147 4.405358 TCCAAATGTCCAGAAATATTGGCC 59.595 41.667 0.00 0.00 36.61 5.36
5269 7148 5.351458 GTCCAAATGTCCAGAAATATTGGC 58.649 41.667 0.00 0.00 36.61 4.52
5270 7149 5.581605 CGTCCAAATGTCCAGAAATATTGG 58.418 41.667 0.00 0.00 37.71 3.16
5271 7150 5.036737 GCGTCCAAATGTCCAGAAATATTG 58.963 41.667 0.00 0.00 0.00 1.90
5272 7151 4.949856 AGCGTCCAAATGTCCAGAAATATT 59.050 37.500 0.00 0.00 0.00 1.28
5273 7152 4.526970 AGCGTCCAAATGTCCAGAAATAT 58.473 39.130 0.00 0.00 0.00 1.28
5274 7153 3.938963 GAGCGTCCAAATGTCCAGAAATA 59.061 43.478 0.00 0.00 0.00 1.40
5275 7154 2.749621 GAGCGTCCAAATGTCCAGAAAT 59.250 45.455 0.00 0.00 0.00 2.17
5276 7155 2.151202 GAGCGTCCAAATGTCCAGAAA 58.849 47.619 0.00 0.00 0.00 2.52
5277 7156 1.808411 GAGCGTCCAAATGTCCAGAA 58.192 50.000 0.00 0.00 0.00 3.02
5278 7157 0.389817 CGAGCGTCCAAATGTCCAGA 60.390 55.000 0.00 0.00 0.00 3.86
5279 7158 1.361668 CCGAGCGTCCAAATGTCCAG 61.362 60.000 0.00 0.00 0.00 3.86
5280 7159 1.375396 CCGAGCGTCCAAATGTCCA 60.375 57.895 0.00 0.00 0.00 4.02
5281 7160 1.079405 TCCGAGCGTCCAAATGTCC 60.079 57.895 0.00 0.00 0.00 4.02
5282 7161 1.696832 GCTCCGAGCGTCCAAATGTC 61.697 60.000 4.23 0.00 0.00 3.06
5283 7162 1.741770 GCTCCGAGCGTCCAAATGT 60.742 57.895 4.23 0.00 0.00 2.71
5284 7163 2.464459 GGCTCCGAGCGTCCAAATG 61.464 63.158 14.21 0.00 43.62 2.32
5285 7164 2.125106 GGCTCCGAGCGTCCAAAT 60.125 61.111 14.21 0.00 43.62 2.32
5286 7165 3.621805 TGGCTCCGAGCGTCCAAA 61.622 61.111 14.21 0.00 43.62 3.28
5287 7166 4.373116 GTGGCTCCGAGCGTCCAA 62.373 66.667 14.21 0.00 43.62 3.53
5290 7169 4.838486 CTCGTGGCTCCGAGCGTC 62.838 72.222 14.21 8.54 46.64 5.19
5316 7195 3.757248 AAGTCATGCGGATCGGGCC 62.757 63.158 0.00 0.00 0.00 5.80
5317 7196 2.203070 AAGTCATGCGGATCGGGC 60.203 61.111 2.13 1.40 0.00 6.13
5318 7197 1.595382 GGAAGTCATGCGGATCGGG 60.595 63.158 2.13 0.00 0.00 5.14
5319 7198 1.595382 GGGAAGTCATGCGGATCGG 60.595 63.158 0.00 0.00 0.00 4.18
5320 7199 1.595382 GGGGAAGTCATGCGGATCG 60.595 63.158 0.00 0.00 0.00 3.69
5321 7200 1.595382 CGGGGAAGTCATGCGGATC 60.595 63.158 0.00 0.00 0.00 3.36
5322 7201 2.505982 CGGGGAAGTCATGCGGAT 59.494 61.111 0.00 0.00 0.00 4.18
5323 7202 3.781307 CCGGGGAAGTCATGCGGA 61.781 66.667 0.00 0.00 0.00 5.54
5324 7203 4.856801 CCCGGGGAAGTCATGCGG 62.857 72.222 14.71 0.00 0.00 5.69
5325 7204 1.754380 TATCCCGGGGAAGTCATGCG 61.754 60.000 23.50 0.00 34.34 4.73
5326 7205 0.035458 CTATCCCGGGGAAGTCATGC 59.965 60.000 23.50 0.00 34.34 4.06
5327 7206 0.035458 GCTATCCCGGGGAAGTCATG 59.965 60.000 23.50 7.78 34.34 3.07
5328 7207 1.472662 CGCTATCCCGGGGAAGTCAT 61.473 60.000 23.50 8.14 34.34 3.06
5329 7208 2.131709 CGCTATCCCGGGGAAGTCA 61.132 63.158 23.50 0.00 34.34 3.41
5330 7209 2.735237 CGCTATCCCGGGGAAGTC 59.265 66.667 23.50 10.55 34.34 3.01
5331 7210 3.547513 GCGCTATCCCGGGGAAGT 61.548 66.667 23.50 7.20 34.34 3.01
5332 7211 3.546543 TGCGCTATCCCGGGGAAG 61.547 66.667 23.50 19.21 34.34 3.46
5333 7212 3.857038 GTGCGCTATCCCGGGGAA 61.857 66.667 23.50 8.23 34.34 3.97
5340 7219 4.971125 GAGGCGGGTGCGCTATCC 62.971 72.222 9.73 8.66 44.10 2.59
5353 7232 4.933064 CTCCCGATGTCGCGAGGC 62.933 72.222 10.24 0.00 39.74 4.70
5354 7233 3.187699 CTCTCCCGATGTCGCGAGG 62.188 68.421 10.24 7.10 42.61 4.63
5355 7234 1.715862 TTCTCTCCCGATGTCGCGAG 61.716 60.000 10.24 10.06 43.43 5.03
5356 7235 1.101635 ATTCTCTCCCGATGTCGCGA 61.102 55.000 3.71 3.71 38.18 5.87
5357 7236 0.661780 GATTCTCTCCCGATGTCGCG 60.662 60.000 0.00 0.00 38.18 5.87
5358 7237 0.319125 GGATTCTCTCCCGATGTCGC 60.319 60.000 0.00 0.00 38.19 5.19
5359 7238 3.875838 GGATTCTCTCCCGATGTCG 57.124 57.895 0.00 0.00 38.19 4.35
5367 7246 1.457009 CGAGACGGGGGATTCTCTCC 61.457 65.000 0.00 0.00 44.11 3.71
5368 7247 2.034607 CGAGACGGGGGATTCTCTC 58.965 63.158 0.00 0.00 36.82 3.20
5369 7248 2.128507 GCGAGACGGGGGATTCTCT 61.129 63.158 0.00 0.00 36.82 3.10
5370 7249 2.077821 GAGCGAGACGGGGGATTCTC 62.078 65.000 0.00 0.00 35.80 2.87
5371 7250 2.042843 AGCGAGACGGGGGATTCT 60.043 61.111 0.00 0.00 0.00 2.40
5372 7251 2.417936 GAGCGAGACGGGGGATTC 59.582 66.667 0.00 0.00 0.00 2.52
5373 7252 3.528370 CGAGCGAGACGGGGGATT 61.528 66.667 0.00 0.00 0.00 3.01
5395 7274 4.803426 GGTCAGAGACAGGCGCCG 62.803 72.222 23.20 18.60 33.68 6.46
5396 7275 3.386237 AGGTCAGAGACAGGCGCC 61.386 66.667 21.89 21.89 33.68 6.53
5397 7276 2.125753 CAGGTCAGAGACAGGCGC 60.126 66.667 0.00 0.00 33.68 6.53
5398 7277 2.125753 GCAGGTCAGAGACAGGCG 60.126 66.667 0.00 0.00 33.68 5.52
5399 7278 1.079266 CAGCAGGTCAGAGACAGGC 60.079 63.158 0.00 2.33 33.68 4.85
5400 7279 1.134759 CATCAGCAGGTCAGAGACAGG 60.135 57.143 0.00 0.00 33.68 4.00
5401 7280 1.739707 GCATCAGCAGGTCAGAGACAG 60.740 57.143 0.00 0.00 41.58 3.51
5402 7281 0.248565 GCATCAGCAGGTCAGAGACA 59.751 55.000 0.00 0.00 41.58 3.41
5403 7282 0.805322 CGCATCAGCAGGTCAGAGAC 60.805 60.000 0.00 0.00 42.27 3.36
5404 7283 0.967380 TCGCATCAGCAGGTCAGAGA 60.967 55.000 0.00 0.00 42.27 3.10
5405 7284 0.528033 CTCGCATCAGCAGGTCAGAG 60.528 60.000 0.00 0.00 42.27 3.35
5406 7285 1.514553 CTCGCATCAGCAGGTCAGA 59.485 57.895 0.00 0.00 42.27 3.27
5407 7286 1.521010 CCTCGCATCAGCAGGTCAG 60.521 63.158 0.00 0.00 42.27 3.51
5408 7287 2.580815 CCTCGCATCAGCAGGTCA 59.419 61.111 0.00 0.00 42.27 4.02
5409 7288 2.894387 GCCTCGCATCAGCAGGTC 60.894 66.667 0.00 0.00 42.27 3.85
5410 7289 4.479993 GGCCTCGCATCAGCAGGT 62.480 66.667 0.00 0.00 42.27 4.00
5427 7306 4.514577 CAGTGTAGGGAGGCGGCG 62.515 72.222 0.51 0.51 0.00 6.46
5428 7307 4.840005 GCAGTGTAGGGAGGCGGC 62.840 72.222 0.00 0.00 0.00 6.53
5429 7308 4.162690 GGCAGTGTAGGGAGGCGG 62.163 72.222 0.00 0.00 0.00 6.13
5430 7309 3.390521 TGGCAGTGTAGGGAGGCG 61.391 66.667 0.00 0.00 0.00 5.52
5431 7310 2.269241 GTGGCAGTGTAGGGAGGC 59.731 66.667 0.00 0.00 0.00 4.70
5432 7311 2.579201 CGTGGCAGTGTAGGGAGG 59.421 66.667 0.00 0.00 0.00 4.30
5433 7312 2.125512 GCGTGGCAGTGTAGGGAG 60.126 66.667 0.00 0.00 0.00 4.30
5434 7313 3.702048 GGCGTGGCAGTGTAGGGA 61.702 66.667 0.00 0.00 0.00 4.20
5435 7314 3.665675 GAGGCGTGGCAGTGTAGGG 62.666 68.421 0.00 0.00 0.00 3.53
5436 7315 2.125512 GAGGCGTGGCAGTGTAGG 60.126 66.667 0.00 0.00 0.00 3.18
5437 7316 1.153745 GAGAGGCGTGGCAGTGTAG 60.154 63.158 0.00 0.00 0.00 2.74
5438 7317 2.646175 GGAGAGGCGTGGCAGTGTA 61.646 63.158 0.00 0.00 0.00 2.90
5439 7318 4.008933 GGAGAGGCGTGGCAGTGT 62.009 66.667 0.00 0.00 0.00 3.55
5440 7319 2.738213 AAAGGAGAGGCGTGGCAGTG 62.738 60.000 0.00 0.00 0.00 3.66
5441 7320 2.456287 GAAAGGAGAGGCGTGGCAGT 62.456 60.000 0.00 0.00 0.00 4.40
5442 7321 1.743252 GAAAGGAGAGGCGTGGCAG 60.743 63.158 0.00 0.00 0.00 4.85
5443 7322 2.347490 GAAAGGAGAGGCGTGGCA 59.653 61.111 0.00 0.00 0.00 4.92
5444 7323 2.436824 GGAAAGGAGAGGCGTGGC 60.437 66.667 0.00 0.00 0.00 5.01
5445 7324 1.219393 GAGGAAAGGAGAGGCGTGG 59.781 63.158 0.00 0.00 0.00 4.94
5446 7325 1.219393 GGAGGAAAGGAGAGGCGTG 59.781 63.158 0.00 0.00 0.00 5.34
5447 7326 0.973496 GAGGAGGAAAGGAGAGGCGT 60.973 60.000 0.00 0.00 0.00 5.68
5448 7327 0.972983 TGAGGAGGAAAGGAGAGGCG 60.973 60.000 0.00 0.00 0.00 5.52
5449 7328 1.280457 TTGAGGAGGAAAGGAGAGGC 58.720 55.000 0.00 0.00 0.00 4.70
5450 7329 3.383223 AGATTGAGGAGGAAAGGAGAGG 58.617 50.000 0.00 0.00 0.00 3.69
5451 7330 3.387699 GGAGATTGAGGAGGAAAGGAGAG 59.612 52.174 0.00 0.00 0.00 3.20
5452 7331 3.246130 TGGAGATTGAGGAGGAAAGGAGA 60.246 47.826 0.00 0.00 0.00 3.71
5453 7332 3.110705 TGGAGATTGAGGAGGAAAGGAG 58.889 50.000 0.00 0.00 0.00 3.69
5454 7333 2.840651 GTGGAGATTGAGGAGGAAAGGA 59.159 50.000 0.00 0.00 0.00 3.36
5455 7334 2.573462 TGTGGAGATTGAGGAGGAAAGG 59.427 50.000 0.00 0.00 0.00 3.11
5456 7335 3.988976 TGTGGAGATTGAGGAGGAAAG 57.011 47.619 0.00 0.00 0.00 2.62
5457 7336 3.623203 GCATGTGGAGATTGAGGAGGAAA 60.623 47.826 0.00 0.00 0.00 3.13
5458 7337 2.092753 GCATGTGGAGATTGAGGAGGAA 60.093 50.000 0.00 0.00 0.00 3.36
5459 7338 1.487976 GCATGTGGAGATTGAGGAGGA 59.512 52.381 0.00 0.00 0.00 3.71
5460 7339 1.211212 TGCATGTGGAGATTGAGGAGG 59.789 52.381 0.00 0.00 0.00 4.30
5461 7340 2.286872 GTGCATGTGGAGATTGAGGAG 58.713 52.381 0.00 0.00 0.00 3.69
5462 7341 1.065199 GGTGCATGTGGAGATTGAGGA 60.065 52.381 0.00 0.00 0.00 3.71
5463 7342 1.064906 AGGTGCATGTGGAGATTGAGG 60.065 52.381 0.00 0.00 0.00 3.86
5464 7343 2.414994 AGGTGCATGTGGAGATTGAG 57.585 50.000 0.00 0.00 0.00 3.02
5465 7344 2.224843 ACAAGGTGCATGTGGAGATTGA 60.225 45.455 0.00 0.00 0.00 2.57
5466 7345 2.165167 ACAAGGTGCATGTGGAGATTG 58.835 47.619 0.00 0.00 0.00 2.67
5467 7346 2.592102 ACAAGGTGCATGTGGAGATT 57.408 45.000 0.00 0.00 0.00 2.40
5468 7347 2.573462 AGTACAAGGTGCATGTGGAGAT 59.427 45.455 1.64 0.00 32.27 2.75
5469 7348 1.977854 AGTACAAGGTGCATGTGGAGA 59.022 47.619 1.64 0.00 32.27 3.71
5470 7349 2.289631 TGAGTACAAGGTGCATGTGGAG 60.290 50.000 1.64 0.00 32.27 3.86
5471 7350 1.696884 TGAGTACAAGGTGCATGTGGA 59.303 47.619 1.64 0.00 32.27 4.02
5472 7351 1.806542 GTGAGTACAAGGTGCATGTGG 59.193 52.381 1.64 0.00 32.27 4.17
5473 7352 2.224079 GTGTGAGTACAAGGTGCATGTG 59.776 50.000 1.64 0.00 38.82 3.21
5474 7353 2.494059 GTGTGAGTACAAGGTGCATGT 58.506 47.619 0.00 0.00 38.82 3.21
5475 7354 1.806542 GGTGTGAGTACAAGGTGCATG 59.193 52.381 0.00 0.00 38.82 4.06
5476 7355 1.699634 AGGTGTGAGTACAAGGTGCAT 59.300 47.619 0.00 0.00 38.82 3.96
5477 7356 1.070134 GAGGTGTGAGTACAAGGTGCA 59.930 52.381 0.00 0.00 38.82 4.57
5478 7357 1.608283 GGAGGTGTGAGTACAAGGTGC 60.608 57.143 0.00 0.00 38.82 5.01
5479 7358 1.336887 CGGAGGTGTGAGTACAAGGTG 60.337 57.143 0.00 0.00 38.82 4.00
5480 7359 0.966920 CGGAGGTGTGAGTACAAGGT 59.033 55.000 0.00 0.00 38.82 3.50
5481 7360 0.389948 GCGGAGGTGTGAGTACAAGG 60.390 60.000 0.00 0.00 38.82 3.61
5482 7361 0.389948 GGCGGAGGTGTGAGTACAAG 60.390 60.000 0.00 0.00 38.82 3.16
5483 7362 0.830444 AGGCGGAGGTGTGAGTACAA 60.830 55.000 0.00 0.00 38.82 2.41
5484 7363 1.228769 AGGCGGAGGTGTGAGTACA 60.229 57.895 0.00 0.00 0.00 2.90
5485 7364 1.511768 GAGGCGGAGGTGTGAGTAC 59.488 63.158 0.00 0.00 0.00 2.73
5486 7365 1.681327 GGAGGCGGAGGTGTGAGTA 60.681 63.158 0.00 0.00 0.00 2.59
5487 7366 2.997897 GGAGGCGGAGGTGTGAGT 60.998 66.667 0.00 0.00 0.00 3.41
5488 7367 2.303549 GATGGAGGCGGAGGTGTGAG 62.304 65.000 0.00 0.00 0.00 3.51
5489 7368 2.284625 ATGGAGGCGGAGGTGTGA 60.285 61.111 0.00 0.00 0.00 3.58
5490 7369 2.187946 GATGGAGGCGGAGGTGTG 59.812 66.667 0.00 0.00 0.00 3.82
5491 7370 3.083997 GGATGGAGGCGGAGGTGT 61.084 66.667 0.00 0.00 0.00 4.16
5492 7371 2.765807 AGGATGGAGGCGGAGGTG 60.766 66.667 0.00 0.00 0.00 4.00
5493 7372 2.444895 GAGGATGGAGGCGGAGGT 60.445 66.667 0.00 0.00 0.00 3.85
5494 7373 2.444706 TGAGGATGGAGGCGGAGG 60.445 66.667 0.00 0.00 0.00 4.30
5495 7374 2.801631 GGTGAGGATGGAGGCGGAG 61.802 68.421 0.00 0.00 0.00 4.63
5496 7375 2.764128 GGTGAGGATGGAGGCGGA 60.764 66.667 0.00 0.00 0.00 5.54
5497 7376 4.227134 CGGTGAGGATGGAGGCGG 62.227 72.222 0.00 0.00 0.00 6.13
5498 7377 4.227134 CCGGTGAGGATGGAGGCG 62.227 72.222 0.00 0.00 45.00 5.52
5499 7378 4.554036 GCCGGTGAGGATGGAGGC 62.554 72.222 1.90 0.00 45.00 4.70
5500 7379 4.227134 CGCCGGTGAGGATGGAGG 62.227 72.222 10.20 0.00 45.00 4.30
5501 7380 4.227134 CCGCCGGTGAGGATGGAG 62.227 72.222 18.79 0.00 45.00 3.86
5519 7398 4.439472 GTACGTTTGCAGCGGCGG 62.439 66.667 9.78 0.00 45.35 6.13
5520 7399 4.439472 GGTACGTTTGCAGCGGCG 62.439 66.667 15.35 0.51 45.35 6.46
5521 7400 1.738830 TAGGTACGTTTGCAGCGGC 60.739 57.895 15.35 0.31 41.68 6.53
5522 7401 1.356527 GGTAGGTACGTTTGCAGCGG 61.357 60.000 15.35 0.00 0.00 5.52
5523 7402 0.668096 TGGTAGGTACGTTTGCAGCG 60.668 55.000 10.53 10.53 0.00 5.18
5524 7403 1.076332 CTGGTAGGTACGTTTGCAGC 58.924 55.000 0.00 0.00 0.00 5.25
5525 7404 2.450609 ACTGGTAGGTACGTTTGCAG 57.549 50.000 0.00 0.00 0.00 4.41
5526 7405 2.231964 CCTACTGGTAGGTACGTTTGCA 59.768 50.000 16.33 0.00 45.93 4.08
5527 7406 2.884827 CCTACTGGTAGGTACGTTTGC 58.115 52.381 16.33 0.00 45.93 3.68
5536 7415 5.169763 GAGAGAACTCCACCTACTGGTAGG 61.170 54.167 21.27 21.27 45.28 3.18
5537 7416 3.949113 GAGAGAACTCCACCTACTGGTAG 59.051 52.174 1.12 1.12 41.52 3.18
5538 7417 3.965694 GAGAGAACTCCACCTACTGGTA 58.034 50.000 0.00 0.00 41.52 3.25
5539 7418 2.810164 GAGAGAACTCCACCTACTGGT 58.190 52.381 0.00 0.00 41.52 4.00
5550 7429 0.687354 TTGTGGGCAGGAGAGAACTC 59.313 55.000 0.00 0.00 41.94 3.01
5551 7430 0.689623 CTTGTGGGCAGGAGAGAACT 59.310 55.000 0.00 0.00 0.00 3.01
5552 7431 0.398318 ACTTGTGGGCAGGAGAGAAC 59.602 55.000 0.00 0.00 0.00 3.01
5553 7432 0.397941 CACTTGTGGGCAGGAGAGAA 59.602 55.000 0.00 0.00 0.00 2.87
5554 7433 0.471780 TCACTTGTGGGCAGGAGAGA 60.472 55.000 0.64 0.00 0.00 3.10
5555 7434 0.036577 CTCACTTGTGGGCAGGAGAG 60.037 60.000 0.64 0.00 34.43 3.20
5556 7435 1.483595 CCTCACTTGTGGGCAGGAGA 61.484 60.000 0.64 0.00 0.00 3.71
5557 7436 1.002868 CCTCACTTGTGGGCAGGAG 60.003 63.158 0.64 0.00 0.00 3.69
5558 7437 3.160585 CCTCACTTGTGGGCAGGA 58.839 61.111 0.64 0.00 0.00 3.86
5559 7438 2.674380 GCCTCACTTGTGGGCAGG 60.674 66.667 20.43 12.85 44.69 4.85
5562 7441 3.368571 GCAGCCTCACTTGTGGGC 61.369 66.667 18.80 18.80 45.57 5.36
5563 7442 2.674380 GGCAGCCTCACTTGTGGG 60.674 66.667 3.29 0.00 0.00 4.61
5564 7443 3.052082 CGGCAGCCTCACTTGTGG 61.052 66.667 10.54 0.00 0.00 4.17
5565 7444 3.052082 CCGGCAGCCTCACTTGTG 61.052 66.667 10.54 0.00 0.00 3.33
5572 7451 4.615815 ATCATCGCCGGCAGCCTC 62.616 66.667 28.98 0.00 38.78 4.70
5573 7452 4.923942 CATCATCGCCGGCAGCCT 62.924 66.667 28.98 3.96 38.78 4.58
5574 7453 4.916293 TCATCATCGCCGGCAGCC 62.916 66.667 28.98 0.00 38.78 4.85
5575 7454 3.643978 GTCATCATCGCCGGCAGC 61.644 66.667 28.98 0.00 38.52 5.25
5576 7455 2.107750 AGTCATCATCGCCGGCAG 59.892 61.111 28.98 19.33 0.00 4.85
5577 7456 2.202919 CAGTCATCATCGCCGGCA 60.203 61.111 28.98 14.46 0.00 5.69
5578 7457 2.969238 CCAGTCATCATCGCCGGC 60.969 66.667 19.07 19.07 0.00 6.13
5579 7458 1.884464 CACCAGTCATCATCGCCGG 60.884 63.158 0.00 0.00 0.00 6.13
5580 7459 1.884464 CCACCAGTCATCATCGCCG 60.884 63.158 0.00 0.00 0.00 6.46
5581 7460 1.091771 CACCACCAGTCATCATCGCC 61.092 60.000 0.00 0.00 0.00 5.54
5582 7461 1.091771 CCACCACCAGTCATCATCGC 61.092 60.000 0.00 0.00 0.00 4.58
5583 7462 0.250234 ACCACCACCAGTCATCATCG 59.750 55.000 0.00 0.00 0.00 3.84
5584 7463 1.679944 CCACCACCACCAGTCATCATC 60.680 57.143 0.00 0.00 0.00 2.92
5585 7464 0.329261 CCACCACCACCAGTCATCAT 59.671 55.000 0.00 0.00 0.00 2.45
5586 7465 1.059584 ACCACCACCACCAGTCATCA 61.060 55.000 0.00 0.00 0.00 3.07
5587 7466 0.606401 CACCACCACCACCAGTCATC 60.606 60.000 0.00 0.00 0.00 2.92
5588 7467 1.455849 CACCACCACCACCAGTCAT 59.544 57.895 0.00 0.00 0.00 3.06
5589 7468 2.751731 CCACCACCACCACCAGTCA 61.752 63.158 0.00 0.00 0.00 3.41
5590 7469 2.113139 CCACCACCACCACCAGTC 59.887 66.667 0.00 0.00 0.00 3.51
5591 7470 2.694616 ACCACCACCACCACCAGT 60.695 61.111 0.00 0.00 0.00 4.00
5592 7471 2.203337 CACCACCACCACCACCAG 60.203 66.667 0.00 0.00 0.00 4.00
5593 7472 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
5597 7476 4.299796 ATGGCCACCACCACCACC 62.300 66.667 8.16 0.00 44.17 4.61
5598 7477 2.990967 CATGGCCACCACCACCAC 60.991 66.667 8.16 0.00 44.17 4.16
5599 7478 2.711883 CTTCATGGCCACCACCACCA 62.712 60.000 8.16 0.00 44.17 4.17
5600 7479 1.978617 CTTCATGGCCACCACCACC 60.979 63.158 8.16 0.00 44.17 4.61
5601 7480 1.074775 TCTTCATGGCCACCACCAC 59.925 57.895 8.16 0.00 44.17 4.16
5602 7481 1.074775 GTCTTCATGGCCACCACCA 59.925 57.895 8.16 0.00 45.82 4.17
5603 7482 2.040544 CGTCTTCATGGCCACCACC 61.041 63.158 8.16 0.00 35.80 4.61
5604 7483 2.040544 CCGTCTTCATGGCCACCAC 61.041 63.158 8.16 0.00 35.80 4.16
5605 7484 2.350895 CCGTCTTCATGGCCACCA 59.649 61.111 8.16 0.00 38.19 4.17
5606 7485 2.438434 CCCGTCTTCATGGCCACC 60.438 66.667 8.16 0.00 0.00 4.61
5607 7486 2.270874 ATCCCCGTCTTCATGGCCAC 62.271 60.000 8.16 0.00 0.00 5.01
5608 7487 2.000701 ATCCCCGTCTTCATGGCCA 61.001 57.895 8.56 8.56 0.00 5.36
5609 7488 1.526917 CATCCCCGTCTTCATGGCC 60.527 63.158 0.00 0.00 0.00 5.36
5610 7489 2.189499 GCATCCCCGTCTTCATGGC 61.189 63.158 0.00 0.00 0.00 4.40
5611 7490 0.816825 CTGCATCCCCGTCTTCATGG 60.817 60.000 0.00 0.00 0.00 3.66
5612 7491 0.816825 CCTGCATCCCCGTCTTCATG 60.817 60.000 0.00 0.00 0.00 3.07
5613 7492 1.274703 ACCTGCATCCCCGTCTTCAT 61.275 55.000 0.00 0.00 0.00 2.57
5614 7493 1.899437 GACCTGCATCCCCGTCTTCA 61.899 60.000 0.00 0.00 0.00 3.02
5615 7494 1.153349 GACCTGCATCCCCGTCTTC 60.153 63.158 0.00 0.00 0.00 2.87
5616 7495 2.670148 GGACCTGCATCCCCGTCTT 61.670 63.158 0.00 0.00 31.94 3.01
5617 7496 3.083997 GGACCTGCATCCCCGTCT 61.084 66.667 0.00 0.00 31.94 4.18
5618 7497 2.478335 TTTGGACCTGCATCCCCGTC 62.478 60.000 3.88 0.00 38.06 4.79
5619 7498 2.484287 CTTTGGACCTGCATCCCCGT 62.484 60.000 3.88 0.00 38.06 5.28
5620 7499 1.750399 CTTTGGACCTGCATCCCCG 60.750 63.158 3.88 0.00 38.06 5.73
5621 7500 1.380380 CCTTTGGACCTGCATCCCC 60.380 63.158 3.88 0.00 38.06 4.81
5622 7501 1.380380 CCCTTTGGACCTGCATCCC 60.380 63.158 3.88 0.00 38.06 3.85
5623 7502 1.380380 CCCCTTTGGACCTGCATCC 60.380 63.158 0.00 0.00 39.45 3.51
5624 7503 1.380380 CCCCCTTTGGACCTGCATC 60.380 63.158 0.00 0.00 35.39 3.91
5625 7504 2.772924 CCCCCTTTGGACCTGCAT 59.227 61.111 0.00 0.00 35.39 3.96
5626 7505 4.299796 GCCCCCTTTGGACCTGCA 62.300 66.667 0.00 0.00 35.39 4.41
5627 7506 3.946126 GAGCCCCCTTTGGACCTGC 62.946 68.421 0.00 0.00 35.39 4.85
5628 7507 2.356667 GAGCCCCCTTTGGACCTG 59.643 66.667 0.00 0.00 35.39 4.00
5629 7508 2.121506 TGAGCCCCCTTTGGACCT 60.122 61.111 0.00 0.00 35.39 3.85
5630 7509 2.035783 GTGAGCCCCCTTTGGACC 59.964 66.667 0.00 0.00 35.39 4.46
5631 7510 2.035783 GGTGAGCCCCCTTTGGAC 59.964 66.667 0.00 0.00 35.39 4.02
5632 7511 3.646715 CGGTGAGCCCCCTTTGGA 61.647 66.667 0.00 0.00 35.39 3.53
5633 7512 3.646715 TCGGTGAGCCCCCTTTGG 61.647 66.667 0.00 0.00 0.00 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.