Multiple sequence alignment - TraesCS1D01G160600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G160600 chr1D 100.000 5655 0 0 1 5655 227645662 227651316 0.000000e+00 10443.0
1 TraesCS1D01G160600 chr1D 93.186 2994 132 34 8 2974 208418734 208415786 0.000000e+00 4333.0
2 TraesCS1D01G160600 chr1D 82.975 1533 167 49 2337 3825 226825706 226827188 0.000000e+00 1299.0
3 TraesCS1D01G160600 chr1D 84.658 906 99 19 3067 3956 223163457 223164338 0.000000e+00 867.0
4 TraesCS1D01G160600 chr1D 89.917 605 42 5 2337 2927 227373947 227374546 0.000000e+00 761.0
5 TraesCS1D01G160600 chr1D 87.635 647 62 6 2337 2971 226943494 226944134 0.000000e+00 736.0
6 TraesCS1D01G160600 chr1D 86.400 625 71 9 2337 2956 223162701 223163316 0.000000e+00 671.0
7 TraesCS1D01G160600 chr1D 85.670 649 60 16 2945 3567 226944181 226944822 0.000000e+00 652.0
8 TraesCS1D01G160600 chr1D 90.927 496 25 7 5163 5650 208412211 208411728 0.000000e+00 649.0
9 TraesCS1D01G160600 chr1D 88.214 543 55 9 3952 4492 261724579 261725114 1.720000e-179 640.0
10 TraesCS1D01G160600 chr1D 84.203 690 71 12 3962 4631 223164289 223164960 2.220000e-178 636.0
11 TraesCS1D01G160600 chr1D 89.852 473 40 7 1323 1790 226943025 226943494 8.110000e-168 601.0
12 TraesCS1D01G160600 chr1D 82.684 693 76 27 3966 4631 226945054 226945729 4.910000e-160 575.0
13 TraesCS1D01G160600 chr1D 86.940 513 54 6 3065 3572 261723862 261724366 1.060000e-156 564.0
14 TraesCS1D01G160600 chr1D 87.420 469 52 5 1323 1790 227373485 227373947 3.000000e-147 532.0
15 TraesCS1D01G160600 chr1D 83.803 568 63 13 4088 4631 226827579 226828141 3.910000e-141 512.0
16 TraesCS1D01G160600 chr1D 88.517 418 45 3 4228 4644 226469313 226469728 2.350000e-138 503.0
17 TraesCS1D01G160600 chr1D 80.802 698 75 28 3978 4648 208413222 208412557 5.090000e-135 492.0
18 TraesCS1D01G160600 chr1D 85.537 484 52 10 1320 1790 261722740 261723218 1.830000e-134 490.0
19 TraesCS1D01G160600 chr1D 92.529 348 13 6 4631 4970 208412539 208412197 2.370000e-133 486.0
20 TraesCS1D01G160600 chr1D 86.339 366 35 9 922 1280 226824656 226825013 8.890000e-103 385.0
21 TraesCS1D01G160600 chr1D 83.704 270 25 10 3673 3939 261724367 261724620 2.630000e-58 237.0
22 TraesCS1D01G160600 chr1D 87.981 208 11 6 4969 5162 186103559 186103352 3.410000e-57 233.0
23 TraesCS1D01G160600 chr1D 84.490 245 27 8 4633 4877 227376335 227376568 1.230000e-56 231.0
24 TraesCS1D01G160600 chr1D 83.665 251 29 8 4627 4876 226828171 226828410 5.700000e-55 226.0
25 TraesCS1D01G160600 chr1D 84.878 205 19 5 4969 5163 466381072 466380870 4.470000e-46 196.0
26 TraesCS1D01G160600 chr1D 85.638 188 12 9 4631 4818 223164995 223165167 3.480000e-42 183.0
27 TraesCS1D01G160600 chr1D 85.965 171 16 5 4633 4803 226945766 226945928 5.820000e-40 176.0
28 TraesCS1D01G160600 chr1D 76.923 338 40 22 180 496 227372649 227372969 2.110000e-34 158.0
29 TraesCS1D01G160600 chr1D 74.702 419 56 23 4052 4431 457845865 457846272 2.120000e-29 141.0
30 TraesCS1D01G160600 chr1D 86.486 111 5 5 1159 1260 477872391 477872282 4.630000e-21 113.0
31 TraesCS1D01G160600 chr1D 89.535 86 2 1 944 1029 227373076 227373154 1.000000e-17 102.0
32 TraesCS1D01G160600 chr1D 82.308 130 9 4 899 1028 261722400 261722515 3.610000e-17 100.0
33 TraesCS1D01G160600 chr1D 83.721 86 8 2 1 80 226933825 226933910 6.080000e-10 76.8
34 TraesCS1D01G160600 chr1D 79.439 107 19 3 2227 2332 440688962 440689066 7.860000e-09 73.1
35 TraesCS1D01G160600 chr1B 95.625 1783 59 12 27 1800 327337960 327339732 0.000000e+00 2843.0
36 TraesCS1D01G160600 chr1B 92.139 865 49 8 2107 2971 327340730 327341575 0.000000e+00 1203.0
37 TraesCS1D01G160600 chr1B 85.587 895 89 17 3067 3949 322474666 322475532 0.000000e+00 902.0
38 TraesCS1D01G160600 chr1B 90.895 648 43 4 2337 2971 327228005 327228649 0.000000e+00 856.0
39 TraesCS1D01G160600 chr1B 88.174 575 59 8 3952 4524 350442070 350441503 0.000000e+00 676.0
40 TraesCS1D01G160600 chr1B 86.124 627 71 10 2337 2956 322473911 322474528 0.000000e+00 662.0
41 TraesCS1D01G160600 chr1B 89.163 526 49 5 3058 3577 326913402 326913925 0.000000e+00 649.0
42 TraesCS1D01G160600 chr1B 89.173 508 32 10 5163 5655 327346234 327346733 3.750000e-171 612.0
43 TraesCS1D01G160600 chr1B 82.319 690 83 14 3961 4631 322475489 322476158 3.830000e-156 562.0
44 TraesCS1D01G160600 chr1B 88.987 454 38 8 1323 1773 326912114 326912558 8.280000e-153 551.0
45 TraesCS1D01G160600 chr1B 85.910 511 59 7 3065 3570 350442785 350442283 3.000000e-147 532.0
46 TraesCS1D01G160600 chr1B 88.303 436 45 5 1350 1784 327227569 327227999 8.400000e-143 518.0
47 TraesCS1D01G160600 chr1B 92.241 348 14 6 4631 4970 327345906 327346248 1.100000e-131 481.0
48 TraesCS1D01G160600 chr1B 87.361 269 22 2 2337 2594 326912575 326912842 1.190000e-76 298.0
49 TraesCS1D01G160600 chr1B 85.385 260 20 9 3682 3939 350442271 350442028 2.620000e-63 254.0
50 TraesCS1D01G160600 chr1B 81.288 326 46 12 4633 4958 327230309 327230619 3.380000e-62 250.0
51 TraesCS1D01G160600 chr1B 96.644 149 4 1 1929 2076 327340587 327340735 4.380000e-61 246.0
52 TraesCS1D01G160600 chr1B 79.845 258 28 12 4721 4970 665251580 665251339 3.500000e-37 167.0
53 TraesCS1D01G160600 chr1B 84.971 173 13 6 4631 4803 322476193 322476352 4.530000e-36 163.0
54 TraesCS1D01G160600 chr1B 87.037 108 7 1 922 1029 326911726 326911826 1.290000e-21 115.0
55 TraesCS1D01G160600 chr1B 89.535 86 2 1 944 1029 327227161 327227239 1.000000e-17 102.0
56 TraesCS1D01G160600 chr1B 83.721 86 8 3 1 80 326910786 326910871 6.080000e-10 76.8
57 TraesCS1D01G160600 chr1A 85.111 900 89 19 3067 3954 290125597 290126463 0.000000e+00 878.0
58 TraesCS1D01G160600 chr1A 86.560 625 69 10 2337 2956 290124845 290125459 0.000000e+00 675.0
59 TraesCS1D01G160600 chr1A 87.826 575 59 10 3952 4524 338593949 338593384 0.000000e+00 664.0
60 TraesCS1D01G160600 chr1A 79.155 1041 134 40 3963 4958 294041389 294042391 1.330000e-180 643.0
61 TraesCS1D01G160600 chr1A 80.571 911 106 37 2945 3825 294040488 294041357 2.220000e-178 636.0
62 TraesCS1D01G160600 chr1A 83.261 693 83 14 3952 4631 290126406 290127078 1.740000e-169 606.0
63 TraesCS1D01G160600 chr1A 82.533 687 95 20 3961 4644 293737458 293738122 1.060000e-161 580.0
64 TraesCS1D01G160600 chr1A 85.743 498 60 4 3078 3572 338594651 338594162 3.020000e-142 516.0
65 TraesCS1D01G160600 chr1A 93.353 346 17 4 5315 5655 294512662 294513006 1.820000e-139 507.0
66 TraesCS1D01G160600 chr1A 87.330 442 46 6 1350 1790 294039374 294039806 1.090000e-136 497.0
67 TraesCS1D01G160600 chr1A 85.331 484 51 12 1320 1790 338595872 338595396 3.060000e-132 483.0
68 TraesCS1D01G160600 chr1A 84.815 270 22 10 3673 3939 338594161 338593908 2.620000e-63 254.0
69 TraesCS1D01G160600 chr1A 84.762 210 29 2 5167 5374 294512470 294512678 2.060000e-49 207.0
70 TraesCS1D01G160600 chr1A 76.370 292 36 18 222 496 294038581 294038856 5.950000e-25 126.0
71 TraesCS1D01G160600 chr1A 84.496 129 10 2 906 1034 338596210 338596092 9.950000e-23 119.0
72 TraesCS1D01G160600 chr1A 85.849 106 15 0 2225 2330 500975642 500975747 4.630000e-21 113.0
73 TraesCS1D01G160600 chr1A 87.209 86 4 1 944 1029 294038958 294039036 2.170000e-14 91.6
74 TraesCS1D01G160600 chr3B 81.840 424 57 13 4228 4631 705149611 705150034 7.020000e-89 339.0
75 TraesCS1D01G160600 chr3B 76.451 293 46 18 3673 3956 705149148 705149426 2.750000e-28 137.0
76 TraesCS1D01G160600 chr3B 92.982 57 2 1 1788 1844 693600259 693600313 1.310000e-11 82.4
77 TraesCS1D01G160600 chr3B 91.071 56 3 1 1789 1844 9773822 9773875 2.190000e-09 75.0
78 TraesCS1D01G160600 chr7D 95.897 195 6 1 4969 5163 176454904 176454712 1.180000e-81 315.0
79 TraesCS1D01G160600 chr7D 89.372 207 8 1 4969 5161 514067211 514067417 1.220000e-61 248.0
80 TraesCS1D01G160600 chr7D 95.070 142 6 1 5019 5160 365814086 365813946 7.370000e-54 222.0
81 TraesCS1D01G160600 chr7D 86.792 106 14 0 2225 2330 111081940 111082045 9.950000e-23 119.0
82 TraesCS1D01G160600 chr3D 80.660 424 62 8 4228 4631 532871130 532871553 1.530000e-80 311.0
83 TraesCS1D01G160600 chr3D 89.952 209 7 1 4969 5163 523410576 523410368 2.020000e-64 257.0
84 TraesCS1D01G160600 chr3D 78.276 290 42 18 3673 3956 532870668 532870942 3.500000e-37 167.0
85 TraesCS1D01G160600 chr3D 82.812 128 19 3 1801 1927 533146661 533146536 1.670000e-20 111.0
86 TraesCS1D01G160600 chr2B 82.240 366 37 12 1969 2332 730508806 730509145 1.990000e-74 291.0
87 TraesCS1D01G160600 chr2A 92.965 199 11 2 4969 5164 240819808 240819610 2.580000e-73 287.0
88 TraesCS1D01G160600 chr2A 93.264 193 11 2 4969 5161 165017337 165017527 3.340000e-72 283.0
89 TraesCS1D01G160600 chr2A 84.034 119 19 0 2225 2343 778038855 778038973 1.290000e-21 115.0
90 TraesCS1D01G160600 chr2A 91.228 57 3 1 1788 1844 701743525 701743471 6.080000e-10 76.8
91 TraesCS1D01G160600 chr7A 91.837 196 13 2 4969 5163 94974492 94974685 2.600000e-68 270.0
92 TraesCS1D01G160600 chr7A 87.560 209 12 2 4969 5163 733497585 733497793 4.410000e-56 230.0
93 TraesCS1D01G160600 chr5D 88.517 209 10 1 4969 5163 58507717 58507925 2.040000e-59 241.0
94 TraesCS1D01G160600 chr5D 84.173 139 15 6 1789 1924 33849378 33849244 1.650000e-25 128.0
95 TraesCS1D01G160600 chr3A 79.795 292 31 14 3673 3956 668226492 668226763 2.690000e-43 187.0
96 TraesCS1D01G160600 chr5A 87.059 170 10 6 2161 2328 530015209 530015050 1.250000e-41 182.0
97 TraesCS1D01G160600 chr5A 84.483 116 18 0 2225 2340 669684755 669684870 1.290000e-21 115.0
98 TraesCS1D01G160600 chr5A 90.566 53 3 1 1789 1841 587558401 587558451 1.020000e-07 69.4
99 TraesCS1D01G160600 chr4B 85.586 111 11 5 2225 2332 43741193 43741301 1.670000e-20 111.0
100 TraesCS1D01G160600 chr4B 92.857 56 2 1 1790 1845 519200896 519200949 4.700000e-11 80.5
101 TraesCS1D01G160600 chr7B 80.741 135 20 5 1800 1932 538342296 538342166 3.610000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G160600 chr1D 227645662 227651316 5654 False 10443.000000 10443 100.000000 1 5655 1 chr1D.!!$F3 5654
1 TraesCS1D01G160600 chr1D 208411728 208418734 7006 True 1490.000000 4333 89.361000 8 5650 4 chr1D.!!$R4 5642
2 TraesCS1D01G160600 chr1D 226824656 226828410 3754 False 605.500000 1299 84.195500 922 4876 4 chr1D.!!$F7 3954
3 TraesCS1D01G160600 chr1D 223162701 223165167 2466 False 589.250000 867 85.224750 2337 4818 4 chr1D.!!$F6 2481
4 TraesCS1D01G160600 chr1D 226943025 226945928 2903 False 548.000000 736 86.361200 1323 4803 5 chr1D.!!$F8 3480
5 TraesCS1D01G160600 chr1D 261722400 261725114 2714 False 406.200000 640 85.340600 899 4492 5 chr1D.!!$F10 3593
6 TraesCS1D01G160600 chr1D 227372649 227376568 3919 False 356.800000 761 85.657000 180 4877 5 chr1D.!!$F9 4697
7 TraesCS1D01G160600 chr1B 327337960 327341575 3615 False 1430.666667 2843 94.802667 27 2971 3 chr1B.!!$F4 2944
8 TraesCS1D01G160600 chr1B 322473911 322476352 2441 False 572.250000 902 84.750250 2337 4803 4 chr1B.!!$F1 2466
9 TraesCS1D01G160600 chr1B 327345906 327346733 827 False 546.500000 612 90.707000 4631 5655 2 chr1B.!!$F5 1024
10 TraesCS1D01G160600 chr1B 350441503 350442785 1282 True 487.333333 676 86.489667 3065 4524 3 chr1B.!!$R2 1459
11 TraesCS1D01G160600 chr1B 327227161 327230619 3458 False 431.500000 856 87.505250 944 4958 4 chr1B.!!$F3 4014
12 TraesCS1D01G160600 chr1B 326910786 326913925 3139 False 337.960000 649 87.253800 1 3577 5 chr1B.!!$F2 3576
13 TraesCS1D01G160600 chr1A 290124845 290127078 2233 False 719.666667 878 84.977333 2337 4631 3 chr1A.!!$F3 2294
14 TraesCS1D01G160600 chr1A 293737458 293738122 664 False 580.000000 580 82.533000 3961 4644 1 chr1A.!!$F1 683
15 TraesCS1D01G160600 chr1A 338593384 338596210 2826 True 407.200000 664 85.642200 906 4524 5 chr1A.!!$R1 3618
16 TraesCS1D01G160600 chr1A 294038581 294042391 3810 False 398.720000 643 82.127000 222 4958 5 chr1A.!!$F4 4736
17 TraesCS1D01G160600 chr1A 294512470 294513006 536 False 357.000000 507 89.057500 5167 5655 2 chr1A.!!$F5 488
18 TraesCS1D01G160600 chr3B 705149148 705150034 886 False 238.000000 339 79.145500 3673 4631 2 chr3B.!!$F3 958
19 TraesCS1D01G160600 chr3D 532870668 532871553 885 False 239.000000 311 79.468000 3673 4631 2 chr3D.!!$F1 958

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
163 399 0.699399 TCAGGTCTCTCTCTTCCCGT 59.301 55.000 0.00 0.00 0.00 5.28 F
164 400 1.075698 TCAGGTCTCTCTCTTCCCGTT 59.924 52.381 0.00 0.00 0.00 4.44 F
220 466 1.798735 CGCTTGGCATCCTCACTTG 59.201 57.895 0.00 0.00 0.00 3.16 F
2157 3721 0.247185 CCATGAGGCACCGCATTTTT 59.753 50.000 2.87 0.00 34.34 1.94 F
3678 5698 0.178992 TGTGGAAGGCAAGGTCCTTG 60.179 55.000 25.05 25.05 45.92 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2075 3639 0.395311 ACTTGAGCCCAGGCATGATG 60.395 55.000 12.03 0.0 44.88 3.07 R
2095 3659 2.396955 GCTGCTTGAGCGCATGACT 61.397 57.895 11.47 0.0 45.83 3.41 R
2163 3727 2.441410 CCTTCCAGAGAAAAGAAGCCC 58.559 52.381 0.00 0.0 36.50 5.19 R
4144 8083 1.071699 GTGGCTGAGTTTGGGTGTAGA 59.928 52.381 0.00 0.0 0.00 2.59 R
5428 9549 0.105039 GAGGATGTGATCGTGGGGAC 59.895 60.000 0.00 0.0 0.00 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 293 1.539496 CGTCGTCCAGAAGAAAACCCA 60.539 52.381 0.00 0.00 0.00 4.51
161 397 3.181480 CGAATTCAGGTCTCTCTCTTCCC 60.181 52.174 6.22 0.00 0.00 3.97
162 398 1.840737 TTCAGGTCTCTCTCTTCCCG 58.159 55.000 0.00 0.00 0.00 5.14
163 399 0.699399 TCAGGTCTCTCTCTTCCCGT 59.301 55.000 0.00 0.00 0.00 5.28
164 400 1.075698 TCAGGTCTCTCTCTTCCCGTT 59.924 52.381 0.00 0.00 0.00 4.44
220 466 1.798735 CGCTTGGCATCCTCACTTG 59.201 57.895 0.00 0.00 0.00 3.16
226 597 2.507484 TGGCATCCTCACTTGTTCTTG 58.493 47.619 0.00 0.00 0.00 3.02
450 848 2.184448 CGAGCCGTGGCAATTATTTTG 58.816 47.619 14.29 0.00 44.88 2.44
531 934 3.414193 TCCCCGCGGAGTAGGAGA 61.414 66.667 30.73 8.37 32.86 3.71
532 935 2.907917 CCCCGCGGAGTAGGAGAG 60.908 72.222 30.73 5.91 0.00 3.20
533 936 2.124236 CCCGCGGAGTAGGAGAGT 60.124 66.667 30.73 0.00 0.00 3.24
826 1231 3.802613 CTCTACTGAGTGTTGCGCT 57.197 52.632 9.73 0.00 35.67 5.92
884 1289 2.922740 TCCGTTGCCTTCACTTTACT 57.077 45.000 0.00 0.00 0.00 2.24
886 1291 1.804748 CCGTTGCCTTCACTTTACTCC 59.195 52.381 0.00 0.00 0.00 3.85
961 1374 8.896744 CATGTGGTATGATTTAATCTCACTTGT 58.103 33.333 6.50 0.27 0.00 3.16
1103 1650 5.106515 GCAAAAGTCAGGGTAAGAAGATGAC 60.107 44.000 0.00 0.00 40.41 3.06
1306 1934 7.661536 ACTAGAAGCAAGTACCTGAATGATA 57.338 36.000 0.00 0.00 0.00 2.15
1398 2042 7.162761 TGTGCATCCAAGATTTTGATTCATTT 58.837 30.769 0.00 0.00 36.36 2.32
1399 2043 8.312564 TGTGCATCCAAGATTTTGATTCATTTA 58.687 29.630 0.00 0.00 36.36 1.40
1400 2044 9.321562 GTGCATCCAAGATTTTGATTCATTTAT 57.678 29.630 0.00 0.00 36.36 1.40
1448 2240 3.738982 CATGTATCCCATTCTTGCGGTA 58.261 45.455 0.00 0.00 0.00 4.02
1506 2299 9.188588 CAACATGACATGAATTTTATCATAGCC 57.811 33.333 22.19 0.00 37.96 3.93
1567 2367 3.763097 TTTGTGCAAATATCAGCTCGG 57.237 42.857 0.00 0.00 0.00 4.63
1974 3534 8.023706 CCTCCTGCAAAAGAAAAGAATTAGTAC 58.976 37.037 0.00 0.00 0.00 2.73
2073 3637 3.205519 TCTCCTCATTCTCCTCCCAAA 57.794 47.619 0.00 0.00 0.00 3.28
2074 3638 2.840651 TCTCCTCATTCTCCTCCCAAAC 59.159 50.000 0.00 0.00 0.00 2.93
2075 3639 1.916181 TCCTCATTCTCCTCCCAAACC 59.084 52.381 0.00 0.00 0.00 3.27
2095 3659 1.134007 CATCATGCCTGGGCTCAAGTA 60.134 52.381 13.05 0.00 42.51 2.24
2154 3718 2.440796 CCCATGAGGCACCGCATT 60.441 61.111 2.87 0.00 34.34 3.56
2156 3720 1.606885 CCCATGAGGCACCGCATTTT 61.607 55.000 2.87 0.00 34.34 1.82
2157 3721 0.247185 CCATGAGGCACCGCATTTTT 59.753 50.000 2.87 0.00 34.34 1.94
2190 3754 1.075601 TTTCTCTGGAAGGGCCACAT 58.924 50.000 6.18 0.00 43.33 3.21
2201 3765 3.959495 AGGGCCACATGAATGTTCTAT 57.041 42.857 6.18 0.00 39.39 1.98
2594 4212 1.060729 TTACCAGGCACCTGCAAGTA 58.939 50.000 11.39 5.77 44.36 2.24
2615 4233 9.421806 CAAGTAATTCCAATGCATAAAGAAACA 57.578 29.630 0.00 0.00 0.00 2.83
2644 4262 2.401583 ACGCCATATGTTGCTCTTCA 57.598 45.000 1.24 0.00 0.00 3.02
2811 4430 4.486125 TGCAGCTACAAATCCATACTCA 57.514 40.909 0.00 0.00 0.00 3.41
2813 4432 6.173427 TGCAGCTACAAATCCATACTCATA 57.827 37.500 0.00 0.00 0.00 2.15
2831 4453 7.615582 ACTCATATGTGTGTCATAAGTTTGG 57.384 36.000 9.55 0.00 41.57 3.28
2853 4475 8.877864 TTGGGATATAAATACCATGATTCCAC 57.122 34.615 0.00 0.00 46.07 4.02
2857 4479 9.125026 GGATATAAATACCATGATTCCACCATC 57.875 37.037 0.00 0.00 0.00 3.51
2860 4482 8.961293 ATAAATACCATGATTCCACCATCATT 57.039 30.769 0.00 0.00 41.20 2.57
2862 4484 7.765695 AATACCATGATTCCACCATCATTAC 57.234 36.000 0.00 0.00 41.20 1.89
2863 4485 5.128033 ACCATGATTCCACCATCATTACA 57.872 39.130 0.00 0.00 41.20 2.41
2864 4486 5.517924 ACCATGATTCCACCATCATTACAA 58.482 37.500 0.00 0.00 41.20 2.41
2865 4487 5.595542 ACCATGATTCCACCATCATTACAAG 59.404 40.000 0.00 0.00 41.20 3.16
2866 4488 5.010314 CCATGATTCCACCATCATTACAAGG 59.990 44.000 0.00 0.00 41.20 3.61
2873 4495 6.135454 TCCACCATCATTACAAGGCAATATT 58.865 36.000 0.00 0.00 0.00 1.28
2923 4639 5.125739 ACAACGTTTTCCCATTAACAAGTCA 59.874 36.000 0.00 0.00 0.00 3.41
2960 4683 5.474578 TGCTGTCAAGTTTCTCTGTAGAT 57.525 39.130 0.00 0.00 0.00 1.98
2973 4768 6.462552 TCTCTGTAGATCTTCAGGAATGTG 57.537 41.667 24.20 11.12 33.13 3.21
2979 4774 5.432680 AGATCTTCAGGAATGTGTCACAT 57.567 39.130 12.87 12.87 41.31 3.21
2999 4795 7.602644 GTCACATTTGAGACTACTATGGTTCAA 59.397 37.037 1.51 0.00 33.71 2.69
3001 4797 8.783093 CACATTTGAGACTACTATGGTTCAAAA 58.217 33.333 9.84 0.00 37.86 2.44
3002 4798 8.784043 ACATTTGAGACTACTATGGTTCAAAAC 58.216 33.333 9.84 0.00 37.86 2.43
3022 4819 4.465632 ACGGCATACACATGTTCTCTTA 57.534 40.909 0.00 0.00 34.40 2.10
3061 4858 8.751335 CATTATTTGGACGTAAATATTTGGTGC 58.249 33.333 11.05 13.20 33.78 5.01
3126 5121 6.750148 ACAAGTTGTCGTTCTCTAATCTTCT 58.250 36.000 1.64 0.00 0.00 2.85
3155 5157 5.880332 TCTAACCTTTACCTAAATGCAGCTG 59.120 40.000 10.11 10.11 0.00 4.24
3159 5161 2.042686 TACCTAAATGCAGCTGGCTG 57.957 50.000 17.12 17.16 45.15 4.85
3179 5181 5.107220 GGCTGCAACTTTGATTTCAAGAATG 60.107 40.000 0.50 0.00 37.15 2.67
3182 5184 4.152938 GCAACTTTGATTTCAAGAATGCCC 59.847 41.667 11.83 0.00 37.15 5.36
3193 5195 0.984230 AGAATGCCCACTCGAAGGAA 59.016 50.000 5.18 0.00 0.00 3.36
3194 5196 1.351017 AGAATGCCCACTCGAAGGAAA 59.649 47.619 5.18 0.00 0.00 3.13
3211 5213 5.911378 AGGAAAATTGCTTGATTCCTCTC 57.089 39.130 8.13 0.00 46.70 3.20
3226 5228 1.754226 CCTCTCCAGGAGCTACTGAAC 59.246 57.143 28.37 0.00 43.65 3.18
3252 5254 9.322773 CTCATCTGCTTTTCTAGTTGATGATAA 57.677 33.333 0.00 0.00 40.43 1.75
3317 5319 3.317993 TCCTAAAAAGAAGGCTGTTGTGC 59.682 43.478 0.00 0.00 33.84 4.57
3328 5330 2.358898 GGCTGTTGTGCTTCAGAAGAAA 59.641 45.455 14.86 2.09 34.02 2.52
3349 5351 3.507411 AGCTACCACAGTTCAGAACCTA 58.493 45.455 9.85 0.00 0.00 3.08
3425 5427 4.503714 TTCCTTGAACTGGACTTGAAGT 57.496 40.909 0.00 0.00 32.65 3.01
3453 5458 3.371285 GTCCGTTCTCCTACATTTGAAGC 59.629 47.826 0.00 0.00 0.00 3.86
3486 5491 7.769044 ACAGAAATGGTATACATCTGTTACCAC 59.231 37.037 19.01 11.11 43.46 4.16
3532 5539 9.777297 ATGATGTATATAAACAGTGCATGTGTA 57.223 29.630 5.19 3.89 43.00 2.90
3591 5600 2.592102 TACCTGGTCGGTTCACTAGT 57.408 50.000 0.63 0.00 46.37 2.57
3594 5603 2.036862 ACCTGGTCGGTTCACTAGTTTC 59.963 50.000 0.00 0.00 46.37 2.78
3613 5622 5.707764 AGTTTCATAGTGGAAAGAAGCTTCC 59.292 40.000 22.81 9.12 44.54 3.46
3651 5671 1.151777 AACGGACATTAGCGATGGCG 61.152 55.000 7.81 4.40 45.37 5.69
3652 5672 2.310233 CGGACATTAGCGATGGCGG 61.310 63.158 7.81 5.37 45.37 6.13
3663 5683 0.179140 CGATGGCGGGATTTTTGTGG 60.179 55.000 0.00 0.00 0.00 4.17
3678 5698 0.178992 TGTGGAAGGCAAGGTCCTTG 60.179 55.000 25.05 25.05 45.92 3.61
3692 5712 6.632672 GCAAGGTCCTTGAGATATTCCAACTA 60.633 42.308 31.94 0.00 43.42 2.24
3784 7455 9.294030 GTAGCACATTCCAATTTCAATAGAAAG 57.706 33.333 0.00 0.00 46.13 2.62
3794 7466 7.387673 CCAATTTCAATAGAAAGGGGTTTTGTC 59.612 37.037 0.00 0.00 46.13 3.18
3801 7474 4.739793 AGAAAGGGGTTTTGTCATCATGA 58.260 39.130 0.00 0.00 0.00 3.07
3808 7482 4.201910 GGGTTTTGTCATCATGATGTACCG 60.202 45.833 30.01 9.33 39.72 4.02
3821 7495 4.258543 TGATGTACCGAAATTCAGGAACC 58.741 43.478 10.02 0.00 0.00 3.62
3858 7537 9.899661 AATGTAGTACTAAAATCTATGTTGGCA 57.100 29.630 3.61 0.00 0.00 4.92
3906 7590 8.581578 TGTTATGTTGTTTAGGAGATTTTTCCC 58.418 33.333 0.00 0.00 38.02 3.97
3907 7591 8.581578 GTTATGTTGTTTAGGAGATTTTTCCCA 58.418 33.333 0.00 0.00 38.02 4.37
3908 7592 6.648879 TGTTGTTTAGGAGATTTTTCCCAG 57.351 37.500 0.00 0.00 38.02 4.45
3909 7593 6.369629 TGTTGTTTAGGAGATTTTTCCCAGA 58.630 36.000 0.00 0.00 38.02 3.86
3910 7594 6.836527 TGTTGTTTAGGAGATTTTTCCCAGAA 59.163 34.615 0.00 0.00 38.02 3.02
3911 7595 7.343316 TGTTGTTTAGGAGATTTTTCCCAGAAA 59.657 33.333 0.00 0.00 38.02 2.52
3912 7596 8.367911 GTTGTTTAGGAGATTTTTCCCAGAAAT 58.632 33.333 0.00 0.00 38.02 2.17
3913 7597 8.491045 TGTTTAGGAGATTTTTCCCAGAAATT 57.509 30.769 0.00 0.00 38.02 1.82
3914 7598 8.933653 TGTTTAGGAGATTTTTCCCAGAAATTT 58.066 29.630 0.00 0.00 38.02 1.82
3915 7599 9.778741 GTTTAGGAGATTTTTCCCAGAAATTTT 57.221 29.630 0.00 0.00 38.02 1.82
3916 7600 9.777297 TTTAGGAGATTTTTCCCAGAAATTTTG 57.223 29.630 0.00 0.00 38.02 2.44
3917 7601 7.379059 AGGAGATTTTTCCCAGAAATTTTGT 57.621 32.000 0.00 0.00 38.02 2.83
3918 7602 7.805163 AGGAGATTTTTCCCAGAAATTTTGTT 58.195 30.769 0.00 0.00 38.02 2.83
3919 7603 7.933577 AGGAGATTTTTCCCAGAAATTTTGTTC 59.066 33.333 0.00 0.00 38.02 3.18
3920 7604 7.933577 GGAGATTTTTCCCAGAAATTTTGTTCT 59.066 33.333 0.00 0.00 38.41 3.01
3921 7605 8.893219 AGATTTTTCCCAGAAATTTTGTTCTC 57.107 30.769 0.00 0.00 35.63 2.87
3922 7606 8.485392 AGATTTTTCCCAGAAATTTTGTTCTCA 58.515 29.630 0.00 0.00 35.63 3.27
3923 7607 9.276590 GATTTTTCCCAGAAATTTTGTTCTCAT 57.723 29.630 0.00 0.00 35.63 2.90
3924 7608 8.436046 TTTTTCCCAGAAATTTTGTTCTCATG 57.564 30.769 0.00 0.00 35.63 3.07
3925 7609 6.729690 TTCCCAGAAATTTTGTTCTCATGT 57.270 33.333 0.00 0.00 35.63 3.21
3926 7610 7.831691 TTCCCAGAAATTTTGTTCTCATGTA 57.168 32.000 0.00 0.00 35.63 2.29
3927 7611 8.421249 TTCCCAGAAATTTTGTTCTCATGTAT 57.579 30.769 0.00 0.00 35.63 2.29
3928 7612 9.527157 TTCCCAGAAATTTTGTTCTCATGTATA 57.473 29.630 0.00 0.00 35.63 1.47
3929 7613 9.699410 TCCCAGAAATTTTGTTCTCATGTATAT 57.301 29.630 0.00 0.00 35.63 0.86
3944 7628 8.971073 TCTCATGTATATATGTGGTATCACTGG 58.029 37.037 7.81 0.00 43.94 4.00
3945 7629 8.664669 TCATGTATATATGTGGTATCACTGGT 57.335 34.615 7.81 0.00 43.94 4.00
3946 7630 9.100197 TCATGTATATATGTGGTATCACTGGTT 57.900 33.333 7.81 0.00 43.94 3.67
3947 7631 9.371136 CATGTATATATGTGGTATCACTGGTTC 57.629 37.037 7.81 0.00 43.94 3.62
3948 7632 8.721133 TGTATATATGTGGTATCACTGGTTCT 57.279 34.615 7.81 0.00 43.94 3.01
3949 7633 8.585018 TGTATATATGTGGTATCACTGGTTCTG 58.415 37.037 7.81 0.00 43.94 3.02
3950 7634 3.634397 ATGTGGTATCACTGGTTCTGG 57.366 47.619 7.81 0.00 43.94 3.86
3954 7638 4.081142 TGTGGTATCACTGGTTCTGGTATG 60.081 45.833 7.81 0.00 43.94 2.39
3957 7641 5.116882 GGTATCACTGGTTCTGGTATGTTC 58.883 45.833 0.00 0.00 0.00 3.18
3980 7664 5.359009 TCTCCCAGAAATTTCATTCTCATGC 59.641 40.000 19.99 0.00 37.56 4.06
4004 7688 8.839343 TGCATATATTTTGTATCACTGGTTCTG 58.161 33.333 0.00 0.00 0.00 3.02
4033 7719 9.806203 ATGTGTCACATACCATCAATTATTTTG 57.194 29.630 16.99 0.00 36.99 2.44
4034 7720 8.249638 TGTGTCACATACCATCAATTATTTTGG 58.750 33.333 0.18 3.03 35.31 3.28
4134 8073 2.285083 CCACGAAGTTGTGTCCAAAGA 58.715 47.619 0.00 0.00 41.61 2.52
4142 8081 4.406456 AGTTGTGTCCAAAGATAATGGCA 58.594 39.130 0.00 0.00 37.88 4.92
4143 8082 5.018809 AGTTGTGTCCAAAGATAATGGCAT 58.981 37.500 0.00 0.00 37.88 4.40
4144 8083 5.481473 AGTTGTGTCCAAAGATAATGGCATT 59.519 36.000 18.01 18.01 37.88 3.56
4155 8094 5.765510 AGATAATGGCATTCTACACCCAAA 58.234 37.500 17.41 0.00 0.00 3.28
4173 8116 3.131046 CCAAACTCAGCCACAACTTTCTT 59.869 43.478 0.00 0.00 0.00 2.52
4183 8126 8.514594 TCAGCCACAACTTTCTTATTTCAATAG 58.485 33.333 0.00 0.00 0.00 1.73
4315 8284 4.955811 TGTACTTATACCTGGATGCCTG 57.044 45.455 0.00 0.00 0.00 4.85
4331 8300 1.333636 CCTGGGATGAGCTCCGTCTT 61.334 60.000 12.15 0.00 46.01 3.01
4388 8357 2.827921 CCTGGACCAAAAGAATGGGAAG 59.172 50.000 0.00 0.00 45.18 3.46
4433 8402 4.098654 TCAGCTCTCCTTAGCAAGTATCAC 59.901 45.833 0.00 0.00 45.30 3.06
4480 8449 5.482175 AGAAGCTAGTGTCTGTAACCTCATT 59.518 40.000 0.00 0.00 0.00 2.57
4483 8452 7.425224 AGCTAGTGTCTGTAACCTCATTATT 57.575 36.000 0.00 0.00 0.00 1.40
4543 8518 0.037160 GGGTGTTTACGGGTGGACAT 59.963 55.000 0.00 0.00 0.00 3.06
4568 8567 2.213310 TGGGATGGGCTGATTTCCTTA 58.787 47.619 0.00 0.00 0.00 2.69
4575 8574 3.198635 TGGGCTGATTTCCTTAGACTCAG 59.801 47.826 0.00 0.00 36.08 3.35
4576 8575 3.198853 GGGCTGATTTCCTTAGACTCAGT 59.801 47.826 0.00 0.00 35.69 3.41
4577 8576 4.438148 GGCTGATTTCCTTAGACTCAGTC 58.562 47.826 0.00 0.00 35.69 3.51
4591 8590 1.974236 CTCAGTCAACTCAAGGACCCT 59.026 52.381 0.00 0.00 34.58 4.34
4670 8706 3.517100 GGCCTGATGGAGAGATAATGCTA 59.483 47.826 0.00 0.00 34.57 3.49
4879 8929 4.814147 CATGGATGATACAGCTATGTCGT 58.186 43.478 5.46 0.00 41.01 4.34
4893 8943 1.372997 GTCGTTCTGCTTGCCTCGA 60.373 57.895 0.00 0.00 0.00 4.04
4894 8944 0.737715 GTCGTTCTGCTTGCCTCGAT 60.738 55.000 0.00 0.00 0.00 3.59
4905 8955 0.946528 TGCCTCGATTACATGCATGC 59.053 50.000 26.53 11.82 0.00 4.06
4926 8976 4.156664 CTGGATTCAGCTGAACACTTTG 57.843 45.455 30.66 14.78 36.80 2.77
4946 8996 6.263617 ACTTTGGTTATCTTTCGCTTGGTTTA 59.736 34.615 0.00 0.00 0.00 2.01
4949 8999 5.034797 GGTTATCTTTCGCTTGGTTTATGC 58.965 41.667 0.00 0.00 0.00 3.14
4958 9008 2.358898 GCTTGGTTTATGCGGATCATGT 59.641 45.455 0.00 0.00 36.63 3.21
4959 9009 3.548818 GCTTGGTTTATGCGGATCATGTC 60.549 47.826 0.00 0.00 36.63 3.06
4960 9010 2.571212 TGGTTTATGCGGATCATGTCC 58.429 47.619 0.00 0.00 44.10 4.02
4961 9011 1.880027 GGTTTATGCGGATCATGTCCC 59.120 52.381 0.00 3.16 44.77 4.46
4962 9012 1.880027 GTTTATGCGGATCATGTCCCC 59.120 52.381 0.00 1.73 44.77 4.81
4963 9013 1.135960 TTATGCGGATCATGTCCCCA 58.864 50.000 0.00 6.48 44.77 4.96
4964 9014 1.135960 TATGCGGATCATGTCCCCAA 58.864 50.000 0.00 0.00 44.77 4.12
4965 9015 0.479815 ATGCGGATCATGTCCCCAAT 59.520 50.000 8.25 0.00 44.77 3.16
4966 9016 1.135960 TGCGGATCATGTCCCCAATA 58.864 50.000 8.25 0.00 44.77 1.90
4967 9017 1.072173 TGCGGATCATGTCCCCAATAG 59.928 52.381 8.25 0.00 44.77 1.73
4968 9018 1.347707 GCGGATCATGTCCCCAATAGA 59.652 52.381 8.25 0.00 44.77 1.98
4969 9019 2.026822 GCGGATCATGTCCCCAATAGAT 60.027 50.000 8.25 0.00 44.77 1.98
4970 9020 3.197766 GCGGATCATGTCCCCAATAGATA 59.802 47.826 8.25 0.00 44.77 1.98
4971 9021 4.323485 GCGGATCATGTCCCCAATAGATAA 60.323 45.833 8.25 0.00 44.77 1.75
4972 9022 5.178797 CGGATCATGTCCCCAATAGATAAC 58.821 45.833 8.25 0.00 44.77 1.89
4973 9023 5.279960 CGGATCATGTCCCCAATAGATAACA 60.280 44.000 8.25 0.00 44.77 2.41
4974 9024 6.176183 GGATCATGTCCCCAATAGATAACAG 58.824 44.000 0.00 0.00 41.50 3.16
4975 9025 5.567037 TCATGTCCCCAATAGATAACAGG 57.433 43.478 0.00 0.00 0.00 4.00
4976 9026 5.223655 TCATGTCCCCAATAGATAACAGGA 58.776 41.667 0.00 0.00 0.00 3.86
4977 9027 5.851693 TCATGTCCCCAATAGATAACAGGAT 59.148 40.000 0.00 0.00 0.00 3.24
4978 9028 7.022496 TCATGTCCCCAATAGATAACAGGATA 58.978 38.462 0.00 0.00 0.00 2.59
4979 9029 6.935240 TGTCCCCAATAGATAACAGGATAG 57.065 41.667 0.00 0.00 0.00 2.08
4980 9030 5.785423 TGTCCCCAATAGATAACAGGATAGG 59.215 44.000 0.00 0.00 0.00 2.57
4981 9031 6.023603 GTCCCCAATAGATAACAGGATAGGA 58.976 44.000 0.00 0.00 0.00 2.94
4982 9032 6.155393 GTCCCCAATAGATAACAGGATAGGAG 59.845 46.154 0.00 0.00 0.00 3.69
4983 9033 6.026186 CCCCAATAGATAACAGGATAGGAGT 58.974 44.000 0.00 0.00 0.00 3.85
4984 9034 6.155393 CCCCAATAGATAACAGGATAGGAGTC 59.845 46.154 0.00 0.00 0.00 3.36
4985 9035 6.957020 CCCAATAGATAACAGGATAGGAGTCT 59.043 42.308 0.00 0.00 0.00 3.24
4986 9036 8.116669 CCCAATAGATAACAGGATAGGAGTCTA 58.883 40.741 0.00 0.00 0.00 2.59
4987 9037 9.184523 CCAATAGATAACAGGATAGGAGTCTAG 57.815 40.741 0.00 0.00 0.00 2.43
4988 9038 9.184523 CAATAGATAACAGGATAGGAGTCTAGG 57.815 40.741 0.00 0.00 0.00 3.02
4989 9039 6.147437 AGATAACAGGATAGGAGTCTAGGG 57.853 45.833 0.00 0.00 0.00 3.53
4990 9040 5.858408 AGATAACAGGATAGGAGTCTAGGGA 59.142 44.000 0.00 0.00 0.00 4.20
4991 9041 4.463050 AACAGGATAGGAGTCTAGGGAG 57.537 50.000 0.00 0.00 0.00 4.30
4992 9042 2.109304 ACAGGATAGGAGTCTAGGGAGC 59.891 54.545 0.00 0.00 0.00 4.70
4993 9043 2.378547 CAGGATAGGAGTCTAGGGAGCT 59.621 54.545 0.00 0.00 0.00 4.09
4994 9044 3.068237 AGGATAGGAGTCTAGGGAGCTT 58.932 50.000 0.00 0.00 0.00 3.74
4995 9045 4.043561 CAGGATAGGAGTCTAGGGAGCTTA 59.956 50.000 0.00 0.00 0.00 3.09
4996 9046 4.861454 AGGATAGGAGTCTAGGGAGCTTAT 59.139 45.833 0.00 0.00 0.00 1.73
4997 9047 5.044402 AGGATAGGAGTCTAGGGAGCTTATC 60.044 48.000 0.00 0.00 0.00 1.75
5009 9059 3.210227 GGAGCTTATCCTCTTTTCTGCC 58.790 50.000 0.00 0.00 45.64 4.85
5010 9060 3.118075 GGAGCTTATCCTCTTTTCTGCCT 60.118 47.826 0.00 0.00 45.64 4.75
5011 9061 4.522114 GAGCTTATCCTCTTTTCTGCCTT 58.478 43.478 0.00 0.00 0.00 4.35
5012 9062 5.396884 GGAGCTTATCCTCTTTTCTGCCTTA 60.397 44.000 0.00 0.00 45.64 2.69
5013 9063 5.432645 AGCTTATCCTCTTTTCTGCCTTAC 58.567 41.667 0.00 0.00 0.00 2.34
5014 9064 4.576873 GCTTATCCTCTTTTCTGCCTTACC 59.423 45.833 0.00 0.00 0.00 2.85
5015 9065 2.762535 TCCTCTTTTCTGCCTTACCG 57.237 50.000 0.00 0.00 0.00 4.02
5016 9066 1.278127 TCCTCTTTTCTGCCTTACCGG 59.722 52.381 0.00 0.00 0.00 5.28
5017 9067 1.003233 CCTCTTTTCTGCCTTACCGGT 59.997 52.381 13.98 13.98 34.25 5.28
5018 9068 2.552373 CCTCTTTTCTGCCTTACCGGTT 60.552 50.000 15.04 0.00 34.25 4.44
5019 9069 2.484264 CTCTTTTCTGCCTTACCGGTTG 59.516 50.000 15.04 6.33 34.25 3.77
5020 9070 2.158726 TCTTTTCTGCCTTACCGGTTGT 60.159 45.455 15.04 0.00 34.25 3.32
5021 9071 3.071312 TCTTTTCTGCCTTACCGGTTGTA 59.929 43.478 15.04 0.06 34.25 2.41
5022 9072 2.460757 TTCTGCCTTACCGGTTGTAC 57.539 50.000 15.04 0.65 34.25 2.90
5023 9073 1.636148 TCTGCCTTACCGGTTGTACT 58.364 50.000 15.04 0.00 34.25 2.73
5024 9074 1.972795 TCTGCCTTACCGGTTGTACTT 59.027 47.619 15.04 0.00 34.25 2.24
5025 9075 2.369532 TCTGCCTTACCGGTTGTACTTT 59.630 45.455 15.04 0.00 34.25 2.66
5026 9076 3.143728 CTGCCTTACCGGTTGTACTTTT 58.856 45.455 15.04 0.00 34.25 2.27
5027 9077 4.040217 TCTGCCTTACCGGTTGTACTTTTA 59.960 41.667 15.04 0.00 34.25 1.52
5028 9078 4.909001 TGCCTTACCGGTTGTACTTTTAT 58.091 39.130 15.04 0.00 34.25 1.40
5029 9079 5.315348 TGCCTTACCGGTTGTACTTTTATT 58.685 37.500 15.04 0.00 34.25 1.40
5030 9080 5.769162 TGCCTTACCGGTTGTACTTTTATTT 59.231 36.000 15.04 0.00 34.25 1.40
5031 9081 6.264970 TGCCTTACCGGTTGTACTTTTATTTT 59.735 34.615 15.04 0.00 34.25 1.82
5032 9082 6.803320 GCCTTACCGGTTGTACTTTTATTTTC 59.197 38.462 15.04 0.00 34.25 2.29
5033 9083 7.308770 GCCTTACCGGTTGTACTTTTATTTTCT 60.309 37.037 15.04 0.00 34.25 2.52
5034 9084 8.570488 CCTTACCGGTTGTACTTTTATTTTCTT 58.430 33.333 15.04 0.00 0.00 2.52
5035 9085 9.955208 CTTACCGGTTGTACTTTTATTTTCTTT 57.045 29.630 15.04 0.00 0.00 2.52
5036 9086 9.733219 TTACCGGTTGTACTTTTATTTTCTTTG 57.267 29.630 15.04 0.00 0.00 2.77
5037 9087 7.774134 ACCGGTTGTACTTTTATTTTCTTTGT 58.226 30.769 0.00 0.00 0.00 2.83
5038 9088 7.916977 ACCGGTTGTACTTTTATTTTCTTTGTC 59.083 33.333 0.00 0.00 0.00 3.18
5039 9089 8.132995 CCGGTTGTACTTTTATTTTCTTTGTCT 58.867 33.333 0.00 0.00 0.00 3.41
5040 9090 9.511144 CGGTTGTACTTTTATTTTCTTTGTCTT 57.489 29.630 0.00 0.00 0.00 3.01
5047 9097 9.305925 ACTTTTATTTTCTTTGTCTTTGCTCTG 57.694 29.630 0.00 0.00 0.00 3.35
5048 9098 7.698836 TTTATTTTCTTTGTCTTTGCTCTGC 57.301 32.000 0.00 0.00 0.00 4.26
5049 9099 4.989279 TTTTCTTTGTCTTTGCTCTGCT 57.011 36.364 0.00 0.00 0.00 4.24
5050 9100 4.989279 TTTCTTTGTCTTTGCTCTGCTT 57.011 36.364 0.00 0.00 0.00 3.91
5051 9101 3.976793 TCTTTGTCTTTGCTCTGCTTG 57.023 42.857 0.00 0.00 0.00 4.01
5052 9102 2.033801 TCTTTGTCTTTGCTCTGCTTGC 59.966 45.455 0.00 0.00 0.00 4.01
5053 9103 0.308684 TTGTCTTTGCTCTGCTTGCG 59.691 50.000 0.00 0.00 0.00 4.85
5054 9104 0.532640 TGTCTTTGCTCTGCTTGCGA 60.533 50.000 0.00 0.00 0.00 5.10
5055 9105 0.165511 GTCTTTGCTCTGCTTGCGAG 59.834 55.000 0.00 0.00 0.00 5.03
5066 9116 1.941325 GCTTGCGAGCTGTAATACCT 58.059 50.000 19.25 0.00 45.65 3.08
5067 9117 2.280628 GCTTGCGAGCTGTAATACCTT 58.719 47.619 19.25 0.00 45.65 3.50
5068 9118 2.285488 GCTTGCGAGCTGTAATACCTTC 59.715 50.000 19.25 0.00 45.65 3.46
5069 9119 3.521560 CTTGCGAGCTGTAATACCTTCA 58.478 45.455 0.00 0.00 0.00 3.02
5070 9120 3.819564 TGCGAGCTGTAATACCTTCAT 57.180 42.857 0.00 0.00 0.00 2.57
5071 9121 3.457234 TGCGAGCTGTAATACCTTCATG 58.543 45.455 0.00 0.00 0.00 3.07
5072 9122 3.132111 TGCGAGCTGTAATACCTTCATGA 59.868 43.478 0.00 0.00 0.00 3.07
5073 9123 3.491267 GCGAGCTGTAATACCTTCATGAC 59.509 47.826 0.00 0.00 0.00 3.06
5074 9124 4.737946 GCGAGCTGTAATACCTTCATGACT 60.738 45.833 0.00 0.00 0.00 3.41
5075 9125 5.352284 CGAGCTGTAATACCTTCATGACTT 58.648 41.667 0.00 0.00 0.00 3.01
5076 9126 5.812642 CGAGCTGTAATACCTTCATGACTTT 59.187 40.000 0.00 0.00 0.00 2.66
5077 9127 6.237942 CGAGCTGTAATACCTTCATGACTTTG 60.238 42.308 0.00 0.00 0.00 2.77
5078 9128 5.882557 AGCTGTAATACCTTCATGACTTTGG 59.117 40.000 0.00 0.00 0.00 3.28
5079 9129 5.066505 GCTGTAATACCTTCATGACTTTGGG 59.933 44.000 0.00 0.00 0.00 4.12
5080 9130 6.381498 TGTAATACCTTCATGACTTTGGGA 57.619 37.500 0.00 0.00 0.00 4.37
5081 9131 6.969043 TGTAATACCTTCATGACTTTGGGAT 58.031 36.000 0.00 0.00 0.00 3.85
5082 9132 8.096621 TGTAATACCTTCATGACTTTGGGATA 57.903 34.615 0.00 0.00 0.00 2.59
5083 9133 7.990886 TGTAATACCTTCATGACTTTGGGATAC 59.009 37.037 0.00 2.68 0.00 2.24
5084 9134 6.831664 ATACCTTCATGACTTTGGGATACT 57.168 37.500 0.00 0.00 0.00 2.12
5085 9135 5.520748 ACCTTCATGACTTTGGGATACTT 57.479 39.130 0.00 0.00 0.00 2.24
5086 9136 5.501156 ACCTTCATGACTTTGGGATACTTC 58.499 41.667 0.00 0.00 0.00 3.01
5087 9137 4.572389 CCTTCATGACTTTGGGATACTTCG 59.428 45.833 0.00 0.00 0.00 3.79
5088 9138 5.414789 TTCATGACTTTGGGATACTTCGA 57.585 39.130 0.00 0.00 0.00 3.71
5089 9139 5.011090 TCATGACTTTGGGATACTTCGAG 57.989 43.478 0.00 0.00 0.00 4.04
5090 9140 4.709886 TCATGACTTTGGGATACTTCGAGA 59.290 41.667 0.00 0.00 0.00 4.04
5091 9141 5.186992 TCATGACTTTGGGATACTTCGAGAA 59.813 40.000 0.00 0.00 0.00 2.87
5092 9142 5.677319 TGACTTTGGGATACTTCGAGAAT 57.323 39.130 0.00 0.00 0.00 2.40
5093 9143 6.049955 TGACTTTGGGATACTTCGAGAATT 57.950 37.500 0.00 0.00 0.00 2.17
5094 9144 6.472887 TGACTTTGGGATACTTCGAGAATTT 58.527 36.000 0.00 0.00 0.00 1.82
5095 9145 6.940298 TGACTTTGGGATACTTCGAGAATTTT 59.060 34.615 0.00 0.00 0.00 1.82
5096 9146 7.447238 TGACTTTGGGATACTTCGAGAATTTTT 59.553 33.333 0.00 0.00 0.00 1.94
5097 9147 8.857694 ACTTTGGGATACTTCGAGAATTTTTA 57.142 30.769 0.00 0.00 0.00 1.52
5098 9148 9.292195 ACTTTGGGATACTTCGAGAATTTTTAA 57.708 29.630 0.00 0.00 0.00 1.52
5108 9158 9.178758 ACTTCGAGAATTTTTAATAAGATGGCT 57.821 29.630 0.00 0.00 0.00 4.75
5109 9159 9.443283 CTTCGAGAATTTTTAATAAGATGGCTG 57.557 33.333 0.00 0.00 0.00 4.85
5110 9160 7.417612 TCGAGAATTTTTAATAAGATGGCTGC 58.582 34.615 0.00 0.00 0.00 5.25
5111 9161 7.066887 TCGAGAATTTTTAATAAGATGGCTGCA 59.933 33.333 0.50 0.00 0.00 4.41
5112 9162 7.864379 CGAGAATTTTTAATAAGATGGCTGCAT 59.136 33.333 0.50 0.00 0.00 3.96
5113 9163 8.882415 AGAATTTTTAATAAGATGGCTGCATG 57.118 30.769 0.50 0.00 0.00 4.06
5114 9164 7.440255 AGAATTTTTAATAAGATGGCTGCATGC 59.560 33.333 11.82 11.82 41.94 4.06
5115 9165 5.595257 TTTTAATAAGATGGCTGCATGCA 57.405 34.783 21.29 21.29 45.15 3.96
5116 9166 5.794726 TTTAATAAGATGGCTGCATGCAT 57.205 34.783 22.97 5.92 45.15 3.96
5117 9167 3.936372 AATAAGATGGCTGCATGCATC 57.064 42.857 22.97 17.75 45.15 3.91
5118 9168 2.351706 TAAGATGGCTGCATGCATCA 57.648 45.000 22.97 21.78 45.15 3.07
5119 9169 1.704641 AAGATGGCTGCATGCATCAT 58.295 45.000 26.51 26.51 45.15 2.45
5120 9170 1.704641 AGATGGCTGCATGCATCATT 58.295 45.000 26.74 17.93 45.15 2.57
5121 9171 2.871453 AGATGGCTGCATGCATCATTA 58.129 42.857 26.74 13.79 45.15 1.90
5122 9172 3.431415 AGATGGCTGCATGCATCATTAT 58.569 40.909 26.74 19.38 45.15 1.28
5123 9173 3.193479 AGATGGCTGCATGCATCATTATG 59.807 43.478 26.74 14.81 45.15 1.90
5124 9174 2.588620 TGGCTGCATGCATCATTATGA 58.411 42.857 22.97 0.00 45.15 2.15
5125 9175 3.161866 TGGCTGCATGCATCATTATGAT 58.838 40.909 22.97 1.25 45.15 2.45
5135 9185 2.174363 TCATTATGATGCAGAGGCCG 57.826 50.000 0.00 0.00 40.13 6.13
5136 9186 1.693606 TCATTATGATGCAGAGGCCGA 59.306 47.619 0.00 0.00 40.13 5.54
5137 9187 2.074576 CATTATGATGCAGAGGCCGAG 58.925 52.381 0.00 0.00 40.13 4.63
5138 9188 0.394192 TTATGATGCAGAGGCCGAGG 59.606 55.000 0.00 0.00 40.13 4.63
5139 9189 1.475169 TATGATGCAGAGGCCGAGGG 61.475 60.000 0.00 0.00 40.13 4.30
5151 9201 4.473520 CGAGGGCACGCCTCCATT 62.474 66.667 8.20 0.00 36.10 3.16
5152 9202 2.044946 GAGGGCACGCCTCCATTT 60.045 61.111 8.20 0.00 36.10 2.32
5153 9203 1.678970 GAGGGCACGCCTCCATTTT 60.679 57.895 8.20 0.00 36.10 1.82
5154 9204 1.657751 GAGGGCACGCCTCCATTTTC 61.658 60.000 8.20 0.00 36.10 2.29
5155 9205 1.976474 GGGCACGCCTCCATTTTCA 60.976 57.895 8.20 0.00 36.10 2.69
5156 9206 1.531739 GGGCACGCCTCCATTTTCAA 61.532 55.000 8.20 0.00 36.10 2.69
5157 9207 0.316841 GGCACGCCTCCATTTTCAAA 59.683 50.000 0.00 0.00 0.00 2.69
5158 9208 1.270041 GGCACGCCTCCATTTTCAAAA 60.270 47.619 0.00 0.00 0.00 2.44
5159 9209 2.478831 GCACGCCTCCATTTTCAAAAA 58.521 42.857 0.00 0.00 0.00 1.94
5199 9249 3.848272 ACCATGGTTCAATGTAAAGCG 57.152 42.857 13.00 0.00 0.00 4.68
5312 9420 1.535462 CAGGGCGTTTAACTTGTCCTG 59.465 52.381 8.73 8.73 35.08 3.86
5343 9451 1.408969 TTTCTCCAGGGGTTTGTTGC 58.591 50.000 0.00 0.00 0.00 4.17
5346 9454 2.203422 CCAGGGGTTTGTTGCGGA 60.203 61.111 0.00 0.00 0.00 5.54
5347 9455 1.606313 CCAGGGGTTTGTTGCGGAT 60.606 57.895 0.00 0.00 0.00 4.18
5348 9456 0.322997 CCAGGGGTTTGTTGCGGATA 60.323 55.000 0.00 0.00 0.00 2.59
5349 9457 1.540267 CAGGGGTTTGTTGCGGATAA 58.460 50.000 0.00 0.00 0.00 1.75
5350 9458 2.099405 CAGGGGTTTGTTGCGGATAAT 58.901 47.619 0.00 0.00 0.00 1.28
5382 9495 7.106239 TCCAAACTAATTTCTCCTTAGAGCTG 58.894 38.462 0.00 0.00 40.22 4.24
5494 9615 1.667154 CTCCATTCCTCCAGCGTCGA 61.667 60.000 0.00 0.00 0.00 4.20
5497 9618 1.982395 ATTCCTCCAGCGTCGACCA 60.982 57.895 10.58 0.00 0.00 4.02
5555 9682 1.662686 CCAGGTCTTTCTCCTCCCTT 58.337 55.000 0.00 0.00 32.37 3.95
5556 9683 1.557371 CCAGGTCTTTCTCCTCCCTTC 59.443 57.143 0.00 0.00 32.37 3.46
5572 9699 0.612229 CTTCCTTCCTGCTCTGCTGA 59.388 55.000 0.00 0.00 0.00 4.26
5650 9781 2.888414 TGGAAAGAACAAACGATTCCCC 59.112 45.455 0.00 0.00 39.01 4.81
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
161 397 2.540101 ACGAAGAAGTGAAGAAGCAACG 59.460 45.455 0.00 0.00 0.00 4.10
162 398 3.059529 GGACGAAGAAGTGAAGAAGCAAC 60.060 47.826 0.00 0.00 0.00 4.17
163 399 3.131396 GGACGAAGAAGTGAAGAAGCAA 58.869 45.455 0.00 0.00 0.00 3.91
164 400 2.548067 GGGACGAAGAAGTGAAGAAGCA 60.548 50.000 0.00 0.00 0.00 3.91
220 466 3.579151 ACCCTCTACTCCAGAACAAGAAC 59.421 47.826 0.00 0.00 31.12 3.01
226 597 4.969484 TGAAAAACCCTCTACTCCAGAAC 58.031 43.478 0.00 0.00 31.12 3.01
417 814 1.635663 CGGCTCGGCTCGTCAAAATT 61.636 55.000 0.00 0.00 0.00 1.82
531 934 2.102588 CCCCACGCTGCTACTAAATACT 59.897 50.000 0.00 0.00 0.00 2.12
532 935 2.480845 CCCCACGCTGCTACTAAATAC 58.519 52.381 0.00 0.00 0.00 1.89
533 936 1.414919 CCCCCACGCTGCTACTAAATA 59.585 52.381 0.00 0.00 0.00 1.40
826 1231 3.760035 GCAGAGGGCCTCGACGAA 61.760 66.667 27.11 0.00 35.36 3.85
884 1289 6.511416 CAAAATACCACACAAAACAGATGGA 58.489 36.000 0.00 0.00 34.38 3.41
886 1291 5.752472 TGCAAAATACCACACAAAACAGATG 59.248 36.000 0.00 0.00 0.00 2.90
961 1374 4.079443 CCCTTCCTCTTCTCTTCTCCTCTA 60.079 50.000 0.00 0.00 0.00 2.43
1131 1679 5.363562 TTTATGAGCATGATGGTGAGAGT 57.636 39.130 0.12 0.00 0.00 3.24
1203 1751 5.739161 CACTCAAACAGCTTTGTGTTTCTAC 59.261 40.000 3.66 0.00 45.53 2.59
1265 1813 8.642432 TGCTTCTAGTACTATGTCATTAGCATT 58.358 33.333 2.33 0.00 0.00 3.56
1306 1934 5.360714 ACACTGTGTTTCCAATCAACAAGAT 59.639 36.000 7.80 0.00 35.91 2.40
1567 2367 1.315981 GGGCTTTTCCTAGCAGTGCC 61.316 60.000 12.58 0.00 43.02 5.01
1862 3337 6.017109 GCCCGAATCTATTAGCAAATCTTTGA 60.017 38.462 6.84 0.00 40.55 2.69
1863 3338 6.145535 GCCCGAATCTATTAGCAAATCTTTG 58.854 40.000 0.00 0.00 41.03 2.77
1974 3534 9.546909 GATGTGAATGTACAGTTTTTGTATGAG 57.453 33.333 0.33 0.00 43.79 2.90
2058 3622 2.918934 TGATGGTTTGGGAGGAGAATGA 59.081 45.455 0.00 0.00 0.00 2.57
2073 3637 1.866483 TTGAGCCCAGGCATGATGGT 61.866 55.000 12.03 0.00 44.88 3.55
2074 3638 1.076559 TTGAGCCCAGGCATGATGG 60.077 57.895 12.03 9.81 44.88 3.51
2075 3639 0.395311 ACTTGAGCCCAGGCATGATG 60.395 55.000 12.03 0.00 44.88 3.07
2095 3659 2.396955 GCTGCTTGAGCGCATGACT 61.397 57.895 11.47 0.00 45.83 3.41
2119 3683 2.492773 GCCATATTGCCGGCTTGCT 61.493 57.895 29.70 11.78 45.29 3.91
2156 3720 6.074648 TCCAGAGAAAAGAAGCCCATAAAAA 58.925 36.000 0.00 0.00 0.00 1.94
2157 3721 5.640147 TCCAGAGAAAAGAAGCCCATAAAA 58.360 37.500 0.00 0.00 0.00 1.52
2158 3722 5.255397 TCCAGAGAAAAGAAGCCCATAAA 57.745 39.130 0.00 0.00 0.00 1.40
2159 3723 4.927267 TCCAGAGAAAAGAAGCCCATAA 57.073 40.909 0.00 0.00 0.00 1.90
2163 3727 2.441410 CCTTCCAGAGAAAAGAAGCCC 58.559 52.381 0.00 0.00 36.50 5.19
2190 3754 6.818644 GCCTCTTCTGTGTTATAGAACATTCA 59.181 38.462 6.16 0.00 46.98 2.57
2201 3765 4.020218 ACTGCTATTGCCTCTTCTGTGTTA 60.020 41.667 0.00 0.00 38.71 2.41
2279 3843 7.550597 TGGATCTAGAGCATCAATCATAACT 57.449 36.000 10.68 0.00 37.82 2.24
2406 3972 7.433708 TCGAAACATCATTGTGAGTAAATGT 57.566 32.000 0.00 0.00 35.83 2.71
2594 4212 7.008021 ACCTGTTTCTTTATGCATTGGAATT 57.992 32.000 3.54 0.00 0.00 2.17
2615 4233 3.350219 ACATATGGCGTTTCAGAACCT 57.650 42.857 7.80 0.00 31.93 3.50
2644 4262 6.581388 TCCTTTCTTGGGATGTCATAAGAT 57.419 37.500 0.00 0.00 0.00 2.40
2775 4394 4.094830 AGCTGCAATATGATGGATGTGA 57.905 40.909 1.02 0.00 0.00 3.58
2813 4432 9.693739 TTTATATCCCAAACTTATGACACACAT 57.306 29.630 0.00 0.00 42.39 3.21
2831 4453 9.125026 GATGGTGGAATCATGGTATTTATATCC 57.875 37.037 0.00 0.00 0.00 2.59
2853 4475 9.814899 TTTACAAATATTGCCTTGTAATGATGG 57.185 29.630 9.98 0.00 43.75 3.51
2923 4639 5.772825 TGACAGCAAAGCAAATAGAAAGT 57.227 34.783 0.00 0.00 0.00 2.66
2973 4768 7.097192 TGAACCATAGTAGTCTCAAATGTGAC 58.903 38.462 7.37 7.37 38.45 3.67
2979 4774 6.425721 CCGTTTTGAACCATAGTAGTCTCAAA 59.574 38.462 0.00 0.00 32.51 2.69
2989 4784 4.155099 TGTGTATGCCGTTTTGAACCATAG 59.845 41.667 0.00 0.00 0.00 2.23
2999 4795 3.674997 AGAGAACATGTGTATGCCGTTT 58.325 40.909 0.00 0.00 37.85 3.60
3001 4797 3.334583 AAGAGAACATGTGTATGCCGT 57.665 42.857 0.00 0.00 37.85 5.68
3002 4798 5.794687 TTTAAGAGAACATGTGTATGCCG 57.205 39.130 0.00 0.00 37.85 5.69
3046 4843 4.862018 CCAACCTTGCACCAAATATTTACG 59.138 41.667 0.00 0.00 0.00 3.18
3051 4848 5.329399 TCTAACCAACCTTGCACCAAATAT 58.671 37.500 0.00 0.00 0.00 1.28
3053 4850 3.571590 TCTAACCAACCTTGCACCAAAT 58.428 40.909 0.00 0.00 0.00 2.32
3054 4851 3.019799 TCTAACCAACCTTGCACCAAA 57.980 42.857 0.00 0.00 0.00 3.28
3055 4852 2.738587 TCTAACCAACCTTGCACCAA 57.261 45.000 0.00 0.00 0.00 3.67
3057 4854 5.914898 AATAATCTAACCAACCTTGCACC 57.085 39.130 0.00 0.00 0.00 5.01
3058 4855 6.099341 CCAAATAATCTAACCAACCTTGCAC 58.901 40.000 0.00 0.00 0.00 4.57
3059 4856 5.777732 ACCAAATAATCTAACCAACCTTGCA 59.222 36.000 0.00 0.00 0.00 4.08
3060 4857 6.280855 ACCAAATAATCTAACCAACCTTGC 57.719 37.500 0.00 0.00 0.00 4.01
3111 5105 9.505995 GGTTAGAACTTAGAAGATTAGAGAACG 57.494 37.037 0.00 0.00 0.00 3.95
3126 5121 9.444600 CTGCATTTAGGTAAAGGTTAGAACTTA 57.555 33.333 0.00 0.00 30.38 2.24
3155 5157 3.981211 TCTTGAAATCAAAGTTGCAGCC 58.019 40.909 0.00 0.00 35.15 4.85
3159 5161 4.152938 GGGCATTCTTGAAATCAAAGTTGC 59.847 41.667 12.05 12.05 35.15 4.17
3179 5181 1.402852 GCAATTTTCCTTCGAGTGGGC 60.403 52.381 6.69 0.00 0.00 5.36
3182 5184 4.488126 TCAAGCAATTTTCCTTCGAGTG 57.512 40.909 0.00 0.00 0.00 3.51
3193 5195 4.021916 CCTGGAGAGGAATCAAGCAATTT 58.978 43.478 0.00 0.00 42.93 1.82
3194 5196 3.267812 TCCTGGAGAGGAATCAAGCAATT 59.732 43.478 0.00 0.00 46.19 2.32
3211 5213 3.030291 AGATGAGTTCAGTAGCTCCTGG 58.970 50.000 6.45 0.00 33.14 4.45
3226 5228 7.789273 ATCATCAACTAGAAAAGCAGATGAG 57.211 36.000 0.00 0.00 44.91 2.90
3252 5254 1.486310 TCTCCACAGCAAAGACACAGT 59.514 47.619 0.00 0.00 0.00 3.55
3299 5301 3.195396 TGAAGCACAACAGCCTTCTTTTT 59.805 39.130 0.00 0.00 34.23 1.94
3317 5319 4.636249 ACTGTGGTAGCTTTCTTCTGAAG 58.364 43.478 11.18 11.18 33.28 3.02
3328 5330 2.330216 AGGTTCTGAACTGTGGTAGCT 58.670 47.619 19.05 3.56 0.00 3.32
3349 5351 1.760405 ACCCCTTCCTCTGGACAAAT 58.240 50.000 0.00 0.00 0.00 2.32
3453 5458 2.332063 ATACCATTTCTGTCCGCCAG 57.668 50.000 0.00 0.00 42.97 4.85
3486 5491 6.741992 TCATTTGTGATGTAACTGCCTAAG 57.258 37.500 0.00 0.00 0.00 2.18
3511 5516 9.051679 TGGATTACACATGCACTGTTTATATAC 57.948 33.333 4.26 0.00 35.29 1.47
3520 5525 4.707030 ATGTTGGATTACACATGCACTG 57.293 40.909 0.00 0.00 0.00 3.66
3585 5594 6.876257 AGCTTCTTTCCACTATGAAACTAGTG 59.124 38.462 0.00 4.61 45.37 2.74
3603 5612 9.696917 CATAAAACATTAAACAGGAAGCTTCTT 57.303 29.630 25.05 16.14 0.00 2.52
3608 5617 6.162777 TGGCATAAAACATTAAACAGGAAGC 58.837 36.000 0.00 0.00 0.00 3.86
3613 5622 6.088883 GTCCGTTGGCATAAAACATTAAACAG 59.911 38.462 0.00 0.00 0.00 3.16
3651 5671 2.289631 CCTTGCCTTCCACAAAAATCCC 60.290 50.000 0.00 0.00 0.00 3.85
3652 5672 2.368548 ACCTTGCCTTCCACAAAAATCC 59.631 45.455 0.00 0.00 0.00 3.01
3663 5683 2.797177 ATCTCAAGGACCTTGCCTTC 57.203 50.000 26.79 0.00 44.89 3.46
3692 5712 8.243961 TGCTTAGAGATCAAGCTAAACTATCT 57.756 34.615 15.06 0.00 46.85 1.98
3784 7455 4.097892 GGTACATCATGATGACAAAACCCC 59.902 45.833 36.37 20.01 41.20 4.95
3794 7466 5.759763 TCCTGAATTTCGGTACATCATGATG 59.240 40.000 29.95 29.95 44.15 3.07
3801 7474 4.295141 TGGTTCCTGAATTTCGGTACAT 57.705 40.909 14.14 0.00 0.00 2.29
3808 7482 7.784633 TGTTTCAAATTGGTTCCTGAATTTC 57.215 32.000 0.00 0.00 30.94 2.17
3900 7584 7.563906 ACATGAGAACAAAATTTCTGGGAAAA 58.436 30.769 0.00 0.00 35.90 2.29
3902 7586 6.729690 ACATGAGAACAAAATTTCTGGGAA 57.270 33.333 0.00 0.00 35.90 3.97
3903 7587 9.699410 ATATACATGAGAACAAAATTTCTGGGA 57.301 29.630 0.00 0.00 35.90 4.37
3918 7602 8.971073 CCAGTGATACCACATATATACATGAGA 58.029 37.037 0.00 0.00 45.54 3.27
3919 7603 8.753133 ACCAGTGATACCACATATATACATGAG 58.247 37.037 0.00 0.00 45.54 2.90
3920 7604 8.664669 ACCAGTGATACCACATATATACATGA 57.335 34.615 0.00 0.00 45.54 3.07
3921 7605 9.371136 GAACCAGTGATACCACATATATACATG 57.629 37.037 0.00 0.00 45.54 3.21
3922 7606 9.326489 AGAACCAGTGATACCACATATATACAT 57.674 33.333 0.00 0.00 45.54 2.29
3923 7607 8.585018 CAGAACCAGTGATACCACATATATACA 58.415 37.037 0.00 0.00 45.54 2.29
3924 7608 8.035394 CCAGAACCAGTGATACCACATATATAC 58.965 40.741 0.00 0.00 45.54 1.47
3925 7609 7.733047 ACCAGAACCAGTGATACCACATATATA 59.267 37.037 0.00 0.00 45.54 0.86
3926 7610 6.558775 ACCAGAACCAGTGATACCACATATAT 59.441 38.462 0.00 0.00 45.54 0.86
3927 7611 5.903010 ACCAGAACCAGTGATACCACATATA 59.097 40.000 0.00 0.00 45.54 0.86
3928 7612 4.721776 ACCAGAACCAGTGATACCACATAT 59.278 41.667 0.00 0.00 45.54 1.78
3929 7613 4.101114 ACCAGAACCAGTGATACCACATA 58.899 43.478 0.00 0.00 45.54 2.29
3930 7614 2.912956 ACCAGAACCAGTGATACCACAT 59.087 45.455 0.00 0.00 45.54 3.21
3931 7615 2.334977 ACCAGAACCAGTGATACCACA 58.665 47.619 0.00 0.00 45.54 4.17
3932 7616 4.081087 ACATACCAGAACCAGTGATACCAC 60.081 45.833 0.00 0.00 43.50 4.16
3933 7617 4.101114 ACATACCAGAACCAGTGATACCA 58.899 43.478 0.00 0.00 0.00 3.25
3934 7618 4.755266 ACATACCAGAACCAGTGATACC 57.245 45.455 0.00 0.00 0.00 2.73
3935 7619 5.978814 AGAACATACCAGAACCAGTGATAC 58.021 41.667 0.00 0.00 0.00 2.24
3936 7620 5.128827 GGAGAACATACCAGAACCAGTGATA 59.871 44.000 0.00 0.00 0.00 2.15
3937 7621 4.080863 GGAGAACATACCAGAACCAGTGAT 60.081 45.833 0.00 0.00 0.00 3.06
3938 7622 3.260884 GGAGAACATACCAGAACCAGTGA 59.739 47.826 0.00 0.00 0.00 3.41
3939 7623 3.600388 GGAGAACATACCAGAACCAGTG 58.400 50.000 0.00 0.00 0.00 3.66
3940 7624 2.572104 GGGAGAACATACCAGAACCAGT 59.428 50.000 0.00 0.00 0.00 4.00
3941 7625 2.571653 TGGGAGAACATACCAGAACCAG 59.428 50.000 0.00 0.00 0.00 4.00
3942 7626 2.626785 TGGGAGAACATACCAGAACCA 58.373 47.619 0.00 0.00 0.00 3.67
3948 7632 5.886609 TGAAATTTCTGGGAGAACATACCA 58.113 37.500 18.64 0.00 33.26 3.25
3949 7633 7.340487 AGAATGAAATTTCTGGGAGAACATACC 59.660 37.037 18.64 0.00 36.07 2.73
3950 7634 8.286191 AGAATGAAATTTCTGGGAGAACATAC 57.714 34.615 18.64 0.00 36.07 2.39
3954 7638 6.824305 TGAGAATGAAATTTCTGGGAGAAC 57.176 37.500 18.64 4.56 36.07 3.01
3957 7641 5.126545 TGCATGAGAATGAAATTTCTGGGAG 59.873 40.000 18.64 3.60 36.07 4.30
3980 7664 9.342308 ACCAGAACCAGTGATACAAAATATATG 57.658 33.333 0.00 0.00 0.00 1.78
3989 7673 4.530553 ACACATACCAGAACCAGTGATACA 59.469 41.667 0.00 0.00 0.00 2.29
3993 7677 2.969262 TGACACATACCAGAACCAGTGA 59.031 45.455 0.00 0.00 0.00 3.41
4033 7719 3.456280 TGTTCAGCAAAAACAATCTGCC 58.544 40.909 0.00 0.00 36.73 4.85
4034 7720 5.006941 ACAATGTTCAGCAAAAACAATCTGC 59.993 36.000 3.20 0.00 39.84 4.26
4101 8040 8.500773 ACACAACTTCGTGGTATTACTAAATTG 58.499 33.333 0.00 0.00 41.38 2.32
4102 8041 8.611654 ACACAACTTCGTGGTATTACTAAATT 57.388 30.769 0.00 0.00 41.38 1.82
4103 8042 7.332678 GGACACAACTTCGTGGTATTACTAAAT 59.667 37.037 0.00 0.00 41.38 1.40
4104 8043 6.646240 GGACACAACTTCGTGGTATTACTAAA 59.354 38.462 0.00 0.00 41.38 1.85
4105 8044 6.158598 GGACACAACTTCGTGGTATTACTAA 58.841 40.000 0.00 0.00 41.38 2.24
4106 8045 5.243507 TGGACACAACTTCGTGGTATTACTA 59.756 40.000 0.00 0.00 41.38 1.82
4107 8046 4.039488 TGGACACAACTTCGTGGTATTACT 59.961 41.667 0.00 0.00 41.38 2.24
4113 8052 2.014128 CTTTGGACACAACTTCGTGGT 58.986 47.619 0.00 0.00 41.38 4.16
4134 8073 5.518865 AGTTTGGGTGTAGAATGCCATTAT 58.481 37.500 0.00 0.00 0.00 1.28
4142 8081 2.375174 TGGCTGAGTTTGGGTGTAGAAT 59.625 45.455 0.00 0.00 0.00 2.40
4143 8082 1.771854 TGGCTGAGTTTGGGTGTAGAA 59.228 47.619 0.00 0.00 0.00 2.10
4144 8083 1.071699 GTGGCTGAGTTTGGGTGTAGA 59.928 52.381 0.00 0.00 0.00 2.59
4155 8094 5.827797 TGAAATAAGAAAGTTGTGGCTGAGT 59.172 36.000 0.00 0.00 0.00 3.41
4173 8116 7.555914 TGCAGAATGTGGTTAGCTATTGAAATA 59.444 33.333 0.00 0.00 39.31 1.40
4183 8126 5.309323 TGTATTTGCAGAATGTGGTTAGC 57.691 39.130 4.89 0.00 39.31 3.09
4292 8261 5.397447 CCAGGCATCCAGGTATAAGTACAAA 60.397 44.000 0.00 0.00 32.25 2.83
4315 8284 0.103937 CTCAAGACGGAGCTCATCCC 59.896 60.000 17.19 0.00 46.50 3.85
4331 8300 1.843851 ACAACCACCTTCTTGGACTCA 59.156 47.619 0.00 0.00 39.24 3.41
4388 8357 3.467803 ACCTGAAGTTACAGTCAAGTGC 58.532 45.455 0.00 0.00 36.30 4.40
4543 8518 1.877672 AATCAGCCCATCCCAAGCCA 61.878 55.000 0.00 0.00 0.00 4.75
4568 8567 2.630580 GGTCCTTGAGTTGACTGAGTCT 59.369 50.000 14.42 0.00 33.15 3.24
4575 8574 2.551071 CCAGAAGGGTCCTTGAGTTGAC 60.551 54.545 7.03 0.00 36.26 3.18
4576 8575 1.699634 CCAGAAGGGTCCTTGAGTTGA 59.300 52.381 7.03 0.00 36.26 3.18
4577 8576 1.699634 TCCAGAAGGGTCCTTGAGTTG 59.300 52.381 7.03 1.07 36.26 3.16
4591 8590 1.281867 CCCACAACATAGCCTCCAGAA 59.718 52.381 0.00 0.00 0.00 3.02
4670 8706 9.317827 TCCGGTTATTAGTAGCTAGGATTAAAT 57.682 33.333 0.00 0.00 0.00 1.40
4694 8740 8.993121 CCACAACATTGTCTCATATATAAGTCC 58.007 37.037 0.00 0.00 39.91 3.85
4763 8813 3.077359 CTCACTTCTCAAATCCGGCTTT 58.923 45.455 0.00 0.00 0.00 3.51
4764 8814 2.303022 TCTCACTTCTCAAATCCGGCTT 59.697 45.455 0.00 0.00 0.00 4.35
4810 8860 6.861572 ACATATTTCTGTCCGACACATATACG 59.138 38.462 0.00 0.00 33.23 3.06
4879 8929 2.760634 TGTAATCGAGGCAAGCAGAA 57.239 45.000 0.00 0.00 0.00 3.02
4893 8943 4.848562 CTGAATCCAGCATGCATGTAAT 57.151 40.909 26.79 11.49 33.07 1.89
4905 8955 3.057736 CCAAAGTGTTCAGCTGAATCCAG 60.058 47.826 30.65 17.87 43.22 3.86
4925 8975 5.392595 GCATAAACCAAGCGAAAGATAACCA 60.393 40.000 0.00 0.00 0.00 3.67
4926 8976 5.034797 GCATAAACCAAGCGAAAGATAACC 58.965 41.667 0.00 0.00 0.00 2.85
4958 9008 6.183361 ACTCCTATCCTGTTATCTATTGGGGA 60.183 42.308 0.00 0.00 0.00 4.81
4959 9009 6.026186 ACTCCTATCCTGTTATCTATTGGGG 58.974 44.000 0.00 0.00 0.00 4.96
4960 9010 6.957020 AGACTCCTATCCTGTTATCTATTGGG 59.043 42.308 0.00 0.00 0.00 4.12
4961 9011 9.184523 CTAGACTCCTATCCTGTTATCTATTGG 57.815 40.741 0.00 0.00 0.00 3.16
4962 9012 9.184523 CCTAGACTCCTATCCTGTTATCTATTG 57.815 40.741 0.00 0.00 0.00 1.90
4963 9013 8.340757 CCCTAGACTCCTATCCTGTTATCTATT 58.659 40.741 0.00 0.00 0.00 1.73
4964 9014 7.689409 TCCCTAGACTCCTATCCTGTTATCTAT 59.311 40.741 0.00 0.00 0.00 1.98
4965 9015 7.030021 TCCCTAGACTCCTATCCTGTTATCTA 58.970 42.308 0.00 0.00 0.00 1.98
4966 9016 5.858408 TCCCTAGACTCCTATCCTGTTATCT 59.142 44.000 0.00 0.00 0.00 1.98
4967 9017 6.142259 TCCCTAGACTCCTATCCTGTTATC 57.858 45.833 0.00 0.00 0.00 1.75
4968 9018 5.517655 GCTCCCTAGACTCCTATCCTGTTAT 60.518 48.000 0.00 0.00 0.00 1.89
4969 9019 4.202588 GCTCCCTAGACTCCTATCCTGTTA 60.203 50.000 0.00 0.00 0.00 2.41
4970 9020 3.437344 GCTCCCTAGACTCCTATCCTGTT 60.437 52.174 0.00 0.00 0.00 3.16
4971 9021 2.109304 GCTCCCTAGACTCCTATCCTGT 59.891 54.545 0.00 0.00 0.00 4.00
4972 9022 2.378547 AGCTCCCTAGACTCCTATCCTG 59.621 54.545 0.00 0.00 0.00 3.86
4973 9023 2.725795 AGCTCCCTAGACTCCTATCCT 58.274 52.381 0.00 0.00 0.00 3.24
4974 9024 3.536075 AAGCTCCCTAGACTCCTATCC 57.464 52.381 0.00 0.00 0.00 2.59
4975 9025 5.044402 AGGATAAGCTCCCTAGACTCCTATC 60.044 48.000 0.00 0.00 46.27 2.08
4976 9026 4.861454 AGGATAAGCTCCCTAGACTCCTAT 59.139 45.833 0.00 0.00 46.27 2.57
4977 9027 4.252853 AGGATAAGCTCCCTAGACTCCTA 58.747 47.826 0.00 0.00 46.27 2.94
4978 9028 3.068237 AGGATAAGCTCCCTAGACTCCT 58.932 50.000 0.00 0.00 46.27 3.69
4979 9029 3.075432 AGAGGATAAGCTCCCTAGACTCC 59.925 52.174 2.66 0.00 46.27 3.85
4980 9030 4.382386 AGAGGATAAGCTCCCTAGACTC 57.618 50.000 2.66 0.00 46.27 3.36
4981 9031 4.825199 AAGAGGATAAGCTCCCTAGACT 57.175 45.455 2.66 0.00 46.27 3.24
4982 9032 5.600898 AGAAAAGAGGATAAGCTCCCTAGAC 59.399 44.000 2.66 0.00 46.27 2.59
4983 9033 5.600484 CAGAAAAGAGGATAAGCTCCCTAGA 59.400 44.000 2.66 0.00 46.27 2.43
4984 9034 5.741673 GCAGAAAAGAGGATAAGCTCCCTAG 60.742 48.000 2.66 0.00 46.27 3.02
4985 9035 4.101741 GCAGAAAAGAGGATAAGCTCCCTA 59.898 45.833 2.66 0.00 46.27 3.53
4986 9036 3.118075 GCAGAAAAGAGGATAAGCTCCCT 60.118 47.826 2.31 2.31 46.27 4.20
4987 9037 3.210227 GCAGAAAAGAGGATAAGCTCCC 58.790 50.000 0.00 0.00 46.27 4.30
4988 9038 3.118075 AGGCAGAAAAGAGGATAAGCTCC 60.118 47.826 0.00 0.00 45.33 4.70
4989 9039 4.149511 AGGCAGAAAAGAGGATAAGCTC 57.850 45.455 0.00 0.00 0.00 4.09
4990 9040 4.582973 AAGGCAGAAAAGAGGATAAGCT 57.417 40.909 0.00 0.00 0.00 3.74
4991 9041 4.576873 GGTAAGGCAGAAAAGAGGATAAGC 59.423 45.833 0.00 0.00 0.00 3.09
4992 9042 4.811557 CGGTAAGGCAGAAAAGAGGATAAG 59.188 45.833 0.00 0.00 0.00 1.73
4993 9043 4.383770 CCGGTAAGGCAGAAAAGAGGATAA 60.384 45.833 0.00 0.00 0.00 1.75
4994 9044 3.134081 CCGGTAAGGCAGAAAAGAGGATA 59.866 47.826 0.00 0.00 0.00 2.59
4995 9045 2.092914 CCGGTAAGGCAGAAAAGAGGAT 60.093 50.000 0.00 0.00 0.00 3.24
4996 9046 1.278127 CCGGTAAGGCAGAAAAGAGGA 59.722 52.381 0.00 0.00 0.00 3.71
4997 9047 1.003233 ACCGGTAAGGCAGAAAAGAGG 59.997 52.381 4.49 0.00 46.52 3.69
4998 9048 2.474410 ACCGGTAAGGCAGAAAAGAG 57.526 50.000 4.49 0.00 46.52 2.85
4999 9049 2.158726 ACAACCGGTAAGGCAGAAAAGA 60.159 45.455 8.00 0.00 46.52 2.52
5000 9050 2.227194 ACAACCGGTAAGGCAGAAAAG 58.773 47.619 8.00 0.00 46.52 2.27
5001 9051 2.351706 ACAACCGGTAAGGCAGAAAA 57.648 45.000 8.00 0.00 46.52 2.29
5002 9052 2.369532 AGTACAACCGGTAAGGCAGAAA 59.630 45.455 8.00 0.00 46.52 2.52
5003 9053 1.972795 AGTACAACCGGTAAGGCAGAA 59.027 47.619 8.00 0.00 46.52 3.02
5004 9054 1.636148 AGTACAACCGGTAAGGCAGA 58.364 50.000 8.00 0.00 46.52 4.26
5005 9055 2.467566 AAGTACAACCGGTAAGGCAG 57.532 50.000 8.00 0.00 46.52 4.85
5006 9056 2.934886 AAAGTACAACCGGTAAGGCA 57.065 45.000 8.00 0.00 46.52 4.75
5007 9057 5.885230 AATAAAAGTACAACCGGTAAGGC 57.115 39.130 8.00 0.00 46.52 4.35
5009 9059 9.955208 AAAGAAAATAAAAGTACAACCGGTAAG 57.045 29.630 8.00 6.45 32.72 2.34
5010 9060 9.733219 CAAAGAAAATAAAAGTACAACCGGTAA 57.267 29.630 8.00 0.00 32.72 2.85
5011 9061 8.901793 ACAAAGAAAATAAAAGTACAACCGGTA 58.098 29.630 8.00 0.00 0.00 4.02
5012 9062 7.774134 ACAAAGAAAATAAAAGTACAACCGGT 58.226 30.769 0.00 0.00 0.00 5.28
5013 9063 8.132995 AGACAAAGAAAATAAAAGTACAACCGG 58.867 33.333 0.00 0.00 0.00 5.28
5014 9064 9.511144 AAGACAAAGAAAATAAAAGTACAACCG 57.489 29.630 0.00 0.00 0.00 4.44
5021 9071 9.305925 CAGAGCAAAGACAAAGAAAATAAAAGT 57.694 29.630 0.00 0.00 0.00 2.66
5022 9072 8.271487 GCAGAGCAAAGACAAAGAAAATAAAAG 58.729 33.333 0.00 0.00 0.00 2.27
5023 9073 7.981225 AGCAGAGCAAAGACAAAGAAAATAAAA 59.019 29.630 0.00 0.00 0.00 1.52
5024 9074 7.491682 AGCAGAGCAAAGACAAAGAAAATAAA 58.508 30.769 0.00 0.00 0.00 1.40
5025 9075 7.042797 AGCAGAGCAAAGACAAAGAAAATAA 57.957 32.000 0.00 0.00 0.00 1.40
5026 9076 6.639632 AGCAGAGCAAAGACAAAGAAAATA 57.360 33.333 0.00 0.00 0.00 1.40
5027 9077 5.526506 AGCAGAGCAAAGACAAAGAAAAT 57.473 34.783 0.00 0.00 0.00 1.82
5028 9078 4.989279 AGCAGAGCAAAGACAAAGAAAA 57.011 36.364 0.00 0.00 0.00 2.29
5029 9079 4.675510 CAAGCAGAGCAAAGACAAAGAAA 58.324 39.130 0.00 0.00 0.00 2.52
5030 9080 3.489738 GCAAGCAGAGCAAAGACAAAGAA 60.490 43.478 0.00 0.00 0.00 2.52
5031 9081 2.033801 GCAAGCAGAGCAAAGACAAAGA 59.966 45.455 0.00 0.00 0.00 2.52
5032 9082 2.391879 GCAAGCAGAGCAAAGACAAAG 58.608 47.619 0.00 0.00 0.00 2.77
5033 9083 1.268692 CGCAAGCAGAGCAAAGACAAA 60.269 47.619 0.00 0.00 0.00 2.83
5034 9084 0.308684 CGCAAGCAGAGCAAAGACAA 59.691 50.000 0.00 0.00 0.00 3.18
5035 9085 0.532640 TCGCAAGCAGAGCAAAGACA 60.533 50.000 0.00 0.00 37.18 3.41
5036 9086 0.165511 CTCGCAAGCAGAGCAAAGAC 59.834 55.000 0.00 0.00 37.18 3.01
5037 9087 2.536725 CTCGCAAGCAGAGCAAAGA 58.463 52.632 0.00 0.00 37.18 2.52
5048 9098 3.521560 TGAAGGTATTACAGCTCGCAAG 58.478 45.455 0.00 0.00 32.46 4.01
5049 9099 3.603158 TGAAGGTATTACAGCTCGCAA 57.397 42.857 0.00 0.00 32.46 4.85
5050 9100 3.132111 TCATGAAGGTATTACAGCTCGCA 59.868 43.478 0.00 0.00 32.46 5.10
5051 9101 3.491267 GTCATGAAGGTATTACAGCTCGC 59.509 47.826 0.00 0.00 32.46 5.03
5052 9102 4.938080 AGTCATGAAGGTATTACAGCTCG 58.062 43.478 0.00 0.00 32.46 5.03
5053 9103 6.037610 CCAAAGTCATGAAGGTATTACAGCTC 59.962 42.308 0.00 0.00 32.46 4.09
5054 9104 5.882557 CCAAAGTCATGAAGGTATTACAGCT 59.117 40.000 0.00 0.00 36.21 4.24
5055 9105 5.066505 CCCAAAGTCATGAAGGTATTACAGC 59.933 44.000 0.00 0.00 0.00 4.40
5056 9106 6.414732 TCCCAAAGTCATGAAGGTATTACAG 58.585 40.000 0.00 0.00 0.00 2.74
5057 9107 6.381498 TCCCAAAGTCATGAAGGTATTACA 57.619 37.500 0.00 0.00 0.00 2.41
5058 9108 8.211629 AGTATCCCAAAGTCATGAAGGTATTAC 58.788 37.037 0.00 0.33 0.00 1.89
5059 9109 8.331931 AGTATCCCAAAGTCATGAAGGTATTA 57.668 34.615 0.00 0.00 0.00 0.98
5060 9110 7.213178 AGTATCCCAAAGTCATGAAGGTATT 57.787 36.000 0.00 0.00 0.00 1.89
5061 9111 6.831664 AGTATCCCAAAGTCATGAAGGTAT 57.168 37.500 0.00 0.00 0.00 2.73
5062 9112 6.629515 CGAAGTATCCCAAAGTCATGAAGGTA 60.630 42.308 0.00 0.00 0.00 3.08
5063 9113 5.501156 GAAGTATCCCAAAGTCATGAAGGT 58.499 41.667 0.00 0.00 0.00 3.50
5064 9114 4.572389 CGAAGTATCCCAAAGTCATGAAGG 59.428 45.833 0.00 0.00 0.00 3.46
5065 9115 5.419542 TCGAAGTATCCCAAAGTCATGAAG 58.580 41.667 0.00 0.00 0.00 3.02
5066 9116 5.186992 TCTCGAAGTATCCCAAAGTCATGAA 59.813 40.000 0.00 0.00 0.00 2.57
5067 9117 4.709886 TCTCGAAGTATCCCAAAGTCATGA 59.290 41.667 0.00 0.00 0.00 3.07
5068 9118 5.011090 TCTCGAAGTATCCCAAAGTCATG 57.989 43.478 0.00 0.00 0.00 3.07
5069 9119 5.677319 TTCTCGAAGTATCCCAAAGTCAT 57.323 39.130 0.00 0.00 0.00 3.06
5070 9120 5.677319 ATTCTCGAAGTATCCCAAAGTCA 57.323 39.130 0.00 0.00 0.00 3.41
5071 9121 6.986904 AAATTCTCGAAGTATCCCAAAGTC 57.013 37.500 0.00 0.00 0.00 3.01
5072 9122 7.761038 AAAAATTCTCGAAGTATCCCAAAGT 57.239 32.000 0.00 0.00 0.00 2.66
5082 9132 9.178758 AGCCATCTTATTAAAAATTCTCGAAGT 57.821 29.630 0.00 0.00 0.00 3.01
5083 9133 9.443283 CAGCCATCTTATTAAAAATTCTCGAAG 57.557 33.333 0.00 0.00 0.00 3.79
5084 9134 7.915397 GCAGCCATCTTATTAAAAATTCTCGAA 59.085 33.333 0.00 0.00 0.00 3.71
5085 9135 7.066887 TGCAGCCATCTTATTAAAAATTCTCGA 59.933 33.333 0.00 0.00 0.00 4.04
5086 9136 7.195646 TGCAGCCATCTTATTAAAAATTCTCG 58.804 34.615 0.00 0.00 0.00 4.04
5087 9137 8.975439 CATGCAGCCATCTTATTAAAAATTCTC 58.025 33.333 0.00 0.00 0.00 2.87
5088 9138 7.440255 GCATGCAGCCATCTTATTAAAAATTCT 59.560 33.333 14.21 0.00 37.23 2.40
5089 9139 7.225145 TGCATGCAGCCATCTTATTAAAAATTC 59.775 33.333 18.46 0.00 44.83 2.17
5090 9140 7.049133 TGCATGCAGCCATCTTATTAAAAATT 58.951 30.769 18.46 0.00 44.83 1.82
5091 9141 6.584488 TGCATGCAGCCATCTTATTAAAAAT 58.416 32.000 18.46 0.00 44.83 1.82
5092 9142 5.975282 TGCATGCAGCCATCTTATTAAAAA 58.025 33.333 18.46 0.00 44.83 1.94
5093 9143 5.595257 TGCATGCAGCCATCTTATTAAAA 57.405 34.783 18.46 0.00 44.83 1.52
5094 9144 5.302313 TGATGCATGCAGCCATCTTATTAAA 59.698 36.000 31.30 6.79 44.83 1.52
5095 9145 4.828387 TGATGCATGCAGCCATCTTATTAA 59.172 37.500 31.30 7.33 44.83 1.40
5096 9146 4.400120 TGATGCATGCAGCCATCTTATTA 58.600 39.130 31.30 8.11 44.83 0.98
5097 9147 3.227614 TGATGCATGCAGCCATCTTATT 58.772 40.909 31.30 8.21 44.83 1.40
5098 9148 2.871453 TGATGCATGCAGCCATCTTAT 58.129 42.857 31.30 9.02 44.83 1.73
5099 9149 2.351706 TGATGCATGCAGCCATCTTA 57.648 45.000 31.30 10.43 44.83 2.10
5100 9150 1.704641 ATGATGCATGCAGCCATCTT 58.295 45.000 31.30 16.09 44.83 2.40
5101 9151 1.704641 AATGATGCATGCAGCCATCT 58.295 45.000 31.30 18.87 44.83 2.90
5102 9152 3.192633 TCATAATGATGCATGCAGCCATC 59.807 43.478 31.30 20.98 44.83 3.51
5103 9153 3.161866 TCATAATGATGCATGCAGCCAT 58.838 40.909 31.30 27.32 44.83 4.40
5104 9154 2.588620 TCATAATGATGCATGCAGCCA 58.411 42.857 31.30 26.44 44.83 4.75
5105 9155 3.511699 CATCATAATGATGCATGCAGCC 58.488 45.455 31.30 22.02 46.37 4.85
5115 9165 2.303890 TCGGCCTCTGCATCATAATGAT 59.696 45.455 0.00 0.00 37.65 2.45
5116 9166 1.693606 TCGGCCTCTGCATCATAATGA 59.306 47.619 0.00 0.00 40.13 2.57
5117 9167 2.074576 CTCGGCCTCTGCATCATAATG 58.925 52.381 0.00 0.00 40.13 1.90
5118 9168 1.002888 CCTCGGCCTCTGCATCATAAT 59.997 52.381 0.00 0.00 40.13 1.28
5119 9169 0.394192 CCTCGGCCTCTGCATCATAA 59.606 55.000 0.00 0.00 40.13 1.90
5120 9170 1.475169 CCCTCGGCCTCTGCATCATA 61.475 60.000 0.00 0.00 40.13 2.15
5121 9171 2.815945 CCCTCGGCCTCTGCATCAT 61.816 63.158 0.00 0.00 40.13 2.45
5122 9172 3.473647 CCCTCGGCCTCTGCATCA 61.474 66.667 0.00 0.00 40.13 3.07
5123 9173 4.925861 GCCCTCGGCCTCTGCATC 62.926 72.222 0.00 0.00 44.06 3.91
5137 9187 1.531739 TTGAAAATGGAGGCGTGCCC 61.532 55.000 7.39 0.00 36.58 5.36
5138 9188 0.316841 TTTGAAAATGGAGGCGTGCC 59.683 50.000 1.67 1.67 0.00 5.01
5139 9189 2.147436 TTTTGAAAATGGAGGCGTGC 57.853 45.000 0.00 0.00 0.00 5.34
5158 9208 6.022315 TGGTTCATCTATTGGGGACATTTTT 58.978 36.000 0.00 0.00 42.32 1.94
5159 9209 5.588845 TGGTTCATCTATTGGGGACATTTT 58.411 37.500 0.00 0.00 42.32 1.82
5160 9210 5.205517 TGGTTCATCTATTGGGGACATTT 57.794 39.130 0.00 0.00 42.32 2.32
5161 9211 4.879295 TGGTTCATCTATTGGGGACATT 57.121 40.909 0.00 0.00 42.32 2.71
5180 9230 2.164219 AGCGCTTTACATTGAACCATGG 59.836 45.455 11.19 11.19 0.00 3.66
5199 9249 6.090129 TCAAAATAAACCATAGACGCAAAGC 58.910 36.000 0.00 0.00 0.00 3.51
5312 9420 4.017126 CCCTGGAGAAATTAGTTTGGACC 58.983 47.826 0.00 0.00 0.00 4.46
5428 9549 0.105039 GAGGATGTGATCGTGGGGAC 59.895 60.000 0.00 0.00 0.00 4.46
5494 9615 0.329596 GAAGACCTGGCTTGGATGGT 59.670 55.000 7.89 0.00 35.23 3.55
5497 9618 0.846427 TGGGAAGACCTGGCTTGGAT 60.846 55.000 7.89 0.00 41.11 3.41
5555 9682 1.548357 GGTCAGCAGAGCAGGAAGGA 61.548 60.000 3.13 0.00 41.81 3.36
5556 9683 1.078567 GGTCAGCAGAGCAGGAAGG 60.079 63.158 3.13 0.00 41.81 3.46
5572 9699 3.763557 AATGACTGGATTTCCCATGGT 57.236 42.857 11.73 0.00 45.57 3.55
5590 9717 4.713792 AGATGGAGAAGGGCGAATAAAT 57.286 40.909 0.00 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.