Multiple sequence alignment - TraesCS1D01G159100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G159100 chr1D 100.000 4343 0 0 1 4343 224399833 224404175 0.000000e+00 8021.0
1 TraesCS1D01G159100 chr1D 100.000 4125 0 0 4554 8678 224404386 224408510 0.000000e+00 7618.0
2 TraesCS1D01G159100 chr1D 96.875 736 23 0 7942 8677 361156124 361155389 0.000000e+00 1232.0
3 TraesCS1D01G159100 chr1D 95.929 737 30 0 7942 8678 3632204 3631468 0.000000e+00 1195.0
4 TraesCS1D01G159100 chr1D 77.941 136 22 6 534 667 419716411 419716540 2.600000e-10 78.7
5 TraesCS1D01G159100 chr1A 92.692 2162 73 21 642 2737 291248373 291250515 0.000000e+00 3038.0
6 TraesCS1D01G159100 chr1A 95.585 1495 60 3 6412 7903 291254939 291256430 0.000000e+00 2390.0
7 TraesCS1D01G159100 chr1A 95.507 1224 42 7 4727 5945 291253137 291254352 0.000000e+00 1943.0
8 TraesCS1D01G159100 chr1A 92.685 998 43 11 2769 3761 291250516 291251488 0.000000e+00 1411.0
9 TraesCS1D01G159100 chr1A 90.476 567 47 2 1 560 291247553 291248119 0.000000e+00 741.0
10 TraesCS1D01G159100 chr1A 97.867 422 8 1 5935 6356 291254396 291254816 0.000000e+00 728.0
11 TraesCS1D01G159100 chr1A 92.375 459 19 3 3813 4258 291251488 291251943 2.640000e-179 640.0
12 TraesCS1D01G159100 chr1B 92.918 1751 70 19 2528 4258 324350350 324352066 0.000000e+00 2497.0
13 TraesCS1D01G159100 chr1B 94.921 1142 45 11 4808 5945 324353348 324354480 0.000000e+00 1775.0
14 TraesCS1D01G159100 chr1B 93.305 1180 43 11 6411 7587 324355078 324356224 0.000000e+00 1709.0
15 TraesCS1D01G159100 chr1B 94.421 968 34 3 872 1824 324342212 324343174 0.000000e+00 1471.0
16 TraesCS1D01G159100 chr1B 93.203 765 29 7 1818 2564 324349589 324350348 0.000000e+00 1103.0
17 TraesCS1D01G159100 chr1B 92.614 704 49 3 1 703 324341516 324342217 0.000000e+00 1009.0
18 TraesCS1D01G159100 chr1B 94.262 488 11 8 5935 6413 324354532 324355011 0.000000e+00 730.0
19 TraesCS1D01G159100 chr1B 89.933 298 20 3 7582 7879 324358308 324358595 8.220000e-100 375.0
20 TraesCS1D01G159100 chr1B 97.849 93 2 0 4733 4825 324353243 324353335 2.510000e-35 161.0
21 TraesCS1D01G159100 chr1B 77.293 229 33 10 3028 3238 583442061 583441834 5.500000e-22 117.0
22 TraesCS1D01G159100 chr2D 96.608 737 23 2 7942 8678 563970371 563969637 0.000000e+00 1221.0
23 TraesCS1D01G159100 chr2D 82.136 515 77 8 8094 8595 20810977 20811489 2.240000e-115 427.0
24 TraesCS1D01G159100 chr2D 90.244 164 14 1 7292 7453 498473160 498472997 6.820000e-51 213.0
25 TraesCS1D01G159100 chr2D 91.000 100 9 0 3420 3519 350777837 350777738 1.520000e-27 135.0
26 TraesCS1D01G159100 chr2D 96.875 32 1 0 3233 3264 525500150 525500119 4.000000e-03 54.7
27 TraesCS1D01G159100 chr7D 96.472 737 22 4 7942 8678 98877286 98878018 0.000000e+00 1214.0
28 TraesCS1D01G159100 chr7D 77.918 711 120 21 2663 3354 264382913 264383605 8.110000e-110 409.0
29 TraesCS1D01G159100 chr7D 89.349 169 15 2 7287 7453 566026742 566026575 8.830000e-50 209.0
30 TraesCS1D01G159100 chr7D 88.485 165 17 1 7291 7453 454079244 454079408 1.910000e-46 198.0
31 TraesCS1D01G159100 chr4D 96.065 737 18 2 7942 8678 41922970 41922245 0.000000e+00 1190.0
32 TraesCS1D01G159100 chr4D 76.449 535 94 27 2756 3276 55376551 55376035 2.400000e-65 261.0
33 TraesCS1D01G159100 chr4D 75.277 542 96 30 2756 3276 55377903 55377379 3.150000e-54 224.0
34 TraesCS1D01G159100 chr4D 77.305 141 21 9 7952 8085 44041942 44042078 1.210000e-08 73.1
35 TraesCS1D01G159100 chr3D 95.393 738 32 2 7942 8678 5426413 5427149 0.000000e+00 1173.0
36 TraesCS1D01G159100 chr3B 95.082 732 36 0 7947 8678 747610687 747609956 0.000000e+00 1153.0
37 TraesCS1D01G159100 chr4A 95.082 732 34 2 7947 8678 695344477 695343748 0.000000e+00 1151.0
38 TraesCS1D01G159100 chr4A 89.474 171 15 3 7285 7453 150653305 150653474 6.820000e-51 213.0
39 TraesCS1D01G159100 chr4A 74.521 365 75 9 2 359 463891544 463891191 9.080000e-30 143.0
40 TraesCS1D01G159100 chr4A 76.446 242 48 7 3008 3242 541431177 541431416 1.180000e-23 122.0
41 TraesCS1D01G159100 chr4A 100.000 29 0 0 3657 3685 191040846 191040874 4.000000e-03 54.7
42 TraesCS1D01G159100 chr4A 100.000 29 0 0 3657 3685 212692920 212692892 4.000000e-03 54.7
43 TraesCS1D01G159100 chr5A 86.644 292 36 3 3395 3683 619175892 619175601 3.910000e-83 320.0
44 TraesCS1D01G159100 chr5D 86.195 297 33 2 3399 3687 325904561 325904265 1.820000e-81 315.0
45 TraesCS1D01G159100 chr5D 86.822 258 25 3 3395 3643 325959689 325959432 6.630000e-71 279.0
46 TraesCS1D01G159100 chr5D 77.436 390 68 9 12 389 185205786 185205405 1.900000e-51 215.0
47 TraesCS1D01G159100 chr5D 89.759 166 15 1 7290 7453 461072598 461072763 2.450000e-50 211.0
48 TraesCS1D01G159100 chr5D 75.354 353 68 7 12 359 559736122 559735784 1.510000e-32 152.0
49 TraesCS1D01G159100 chr5D 75.403 248 48 10 13 259 561640900 561640665 3.310000e-19 108.0
50 TraesCS1D01G159100 chr5B 86.301 292 36 4 3395 3683 611643591 611643301 1.820000e-81 315.0
51 TraesCS1D01G159100 chr5B 76.009 446 80 12 12 446 160136204 160135775 1.140000e-48 206.0
52 TraesCS1D01G159100 chr5B 89.157 166 16 2 7290 7453 539314447 539314282 1.140000e-48 206.0
53 TraesCS1D01G159100 chr5B 76.864 389 72 8 12 389 160136735 160136354 4.110000e-48 204.0
54 TraesCS1D01G159100 chr7B 85.430 302 35 4 3395 3687 5919333 5919032 1.090000e-78 305.0
55 TraesCS1D01G159100 chr7B 75.350 357 67 15 12 359 468427416 468427072 1.510000e-32 152.0
56 TraesCS1D01G159100 chr2B 82.879 257 31 8 3420 3674 416857389 416857144 1.470000e-52 219.0
57 TraesCS1D01G159100 chr2B 84.507 71 8 2 3194 3264 621972202 621972269 5.620000e-07 67.6
58 TraesCS1D01G159100 chr4B 76.201 458 76 19 12 446 120425277 120424830 2.450000e-50 211.0
59 TraesCS1D01G159100 chr4B 89.286 168 16 1 7288 7453 28724137 28724304 8.830000e-50 209.0
60 TraesCS1D01G159100 chr4B 75.346 361 72 10 2 356 173975206 173975555 3.240000e-34 158.0
61 TraesCS1D01G159100 chr4B 100.000 29 0 0 3657 3685 368106080 368106052 4.000000e-03 54.7
62 TraesCS1D01G159100 chr3A 75.424 354 69 15 12 359 692115908 692115567 1.170000e-33 156.0
63 TraesCS1D01G159100 chr6B 86.842 76 7 2 4554 4629 133167210 133167138 2.010000e-11 82.4
64 TraesCS1D01G159100 chr6A 84.127 63 9 1 633 694 479835426 479835364 9.410000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G159100 chr1D 224399833 224408510 8677 False 7819.500000 8021 100.000000 1 8678 2 chr1D.!!$F2 8677
1 TraesCS1D01G159100 chr1D 361155389 361156124 735 True 1232.000000 1232 96.875000 7942 8677 1 chr1D.!!$R2 735
2 TraesCS1D01G159100 chr1D 3631468 3632204 736 True 1195.000000 1195 95.929000 7942 8678 1 chr1D.!!$R1 736
3 TraesCS1D01G159100 chr1A 291247553 291256430 8877 False 1555.857143 3038 93.883857 1 7903 7 chr1A.!!$F1 7902
4 TraesCS1D01G159100 chr1B 324341516 324343174 1658 False 1240.000000 1471 93.517500 1 1824 2 chr1B.!!$F1 1823
5 TraesCS1D01G159100 chr1B 324349589 324358595 9006 False 1192.857143 2497 93.770143 1818 7879 7 chr1B.!!$F2 6061
6 TraesCS1D01G159100 chr2D 563969637 563970371 734 True 1221.000000 1221 96.608000 7942 8678 1 chr2D.!!$R4 736
7 TraesCS1D01G159100 chr2D 20810977 20811489 512 False 427.000000 427 82.136000 8094 8595 1 chr2D.!!$F1 501
8 TraesCS1D01G159100 chr7D 98877286 98878018 732 False 1214.000000 1214 96.472000 7942 8678 1 chr7D.!!$F1 736
9 TraesCS1D01G159100 chr7D 264382913 264383605 692 False 409.000000 409 77.918000 2663 3354 1 chr7D.!!$F2 691
10 TraesCS1D01G159100 chr4D 41922245 41922970 725 True 1190.000000 1190 96.065000 7942 8678 1 chr4D.!!$R1 736
11 TraesCS1D01G159100 chr4D 55376035 55377903 1868 True 242.500000 261 75.863000 2756 3276 2 chr4D.!!$R2 520
12 TraesCS1D01G159100 chr3D 5426413 5427149 736 False 1173.000000 1173 95.393000 7942 8678 1 chr3D.!!$F1 736
13 TraesCS1D01G159100 chr3B 747609956 747610687 731 True 1153.000000 1153 95.082000 7947 8678 1 chr3B.!!$R1 731
14 TraesCS1D01G159100 chr4A 695343748 695344477 729 True 1151.000000 1151 95.082000 7947 8678 1 chr4A.!!$R3 731
15 TraesCS1D01G159100 chr5B 160135775 160136735 960 True 205.000000 206 76.436500 12 446 2 chr5B.!!$R3 434

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
668 1391 0.038744 ACCCAATTCCTCCTGCTGTG 59.961 55.0 0.00 0.00 0.00 3.66 F
787 1511 0.246635 AACGCGCCTAACTGAGATGT 59.753 50.0 5.73 0.00 0.00 3.06 F
788 1512 0.458543 ACGCGCCTAACTGAGATGTG 60.459 55.0 5.73 0.00 0.00 3.21 F
981 1739 0.663153 CGGCCCGAAATTTCATCTCC 59.337 55.0 17.99 11.17 0.00 3.71 F
2648 3478 1.762708 ACCACCCTATGCCAAATTCG 58.237 50.0 0.00 0.00 0.00 3.34 F
3537 5743 0.033781 AAACGTTGCATGCAGCCATT 59.966 45.0 26.20 18.38 44.83 3.16 F
4622 6846 0.108138 GCGTGGTGCTGGTATCTTCT 60.108 55.0 0.00 0.00 41.73 2.85 F
4645 6869 0.040499 ATAGATCTCTCTCGGCCCCC 59.960 60.0 0.00 0.00 32.66 5.40 F
4681 6905 1.039856 GGCCCGGTGCATCATTTAAT 58.960 50.0 15.49 0.00 43.89 1.40 F
6410 9486 0.370273 GCACATGTAGAAAGCGGACG 59.630 55.0 0.00 0.00 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2214 2994 1.909986 AGGCAGGAAAGGGAAGAGTAC 59.090 52.381 0.00 0.00 0.00 2.73 R
2763 3593 0.400213 CTTGTTGTGTAGGCTCCCCA 59.600 55.000 0.00 0.00 0.00 4.96 R
2905 5089 2.967201 TGAACCTTTACCAACGAGGAGA 59.033 45.455 5.70 0.00 41.22 3.71 R
2957 5141 0.320374 CTTAGTGGTCGACCTTGCCA 59.680 55.000 33.39 12.03 36.82 4.92 R
4307 6531 0.036732 AGGAGCTTTCCAATGCGTGA 59.963 50.000 0.00 0.00 34.59 4.35 R
4626 6850 0.040499 GGGGGCCGAGAGAGATCTAT 59.960 60.000 0.00 0.00 0.00 1.98 R
6352 9404 0.048117 TACTCCCTCCCTCCCTCTCT 59.952 60.000 0.00 0.00 0.00 3.10 R
6357 9409 0.105607 AACGATACTCCCTCCCTCCC 60.106 60.000 0.00 0.00 0.00 4.30 R
6470 9628 0.392706 AACATCAGTGACTGTCGCCA 59.607 50.000 17.11 5.48 32.61 5.69 R
7934 13198 0.536460 GGGGCGTTCCAAACAGAGAA 60.536 55.000 0.00 0.00 37.22 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 656 2.499693 CCCTCTTCCTCTTCCTCTCAAC 59.500 54.545 0.00 0.00 0.00 3.18
256 802 2.045708 CATGCTTGCCGGTAGCCAA 61.046 57.895 22.54 9.60 42.71 4.52
315 866 3.807622 TGAAAGTGTTGAGGAACTTAGCG 59.192 43.478 0.00 0.00 41.55 4.26
413 964 5.683876 AACCAGTGATATGTGAGCTAACT 57.316 39.130 2.06 0.00 0.00 2.24
447 998 1.896465 GGTAGTGCTCTGTCTCCAACT 59.104 52.381 0.00 0.00 0.00 3.16
451 1002 2.435805 AGTGCTCTGTCTCCAACTGAAA 59.564 45.455 0.00 0.00 35.66 2.69
455 1006 3.817647 GCTCTGTCTCCAACTGAAACATT 59.182 43.478 0.00 0.00 35.66 2.71
457 1008 5.121454 GCTCTGTCTCCAACTGAAACATTAG 59.879 44.000 0.00 0.00 35.66 1.73
519 1070 4.851843 TCTACAACCGACCAGAGAAGATA 58.148 43.478 0.00 0.00 0.00 1.98
524 1075 4.774660 ACCGACCAGAGAAGATACTCTA 57.225 45.455 0.00 0.00 44.18 2.43
576 1127 1.831736 GGACAGAGAATTCGAAGGGGA 59.168 52.381 3.35 0.00 0.00 4.81
577 1128 2.159028 GGACAGAGAATTCGAAGGGGAG 60.159 54.545 3.35 0.00 0.00 4.30
578 1129 2.761208 GACAGAGAATTCGAAGGGGAGA 59.239 50.000 3.35 0.00 0.00 3.71
581 1132 1.414550 GAGAATTCGAAGGGGAGAGGG 59.585 57.143 3.35 0.00 0.00 4.30
583 1134 0.988678 AATTCGAAGGGGAGAGGGGG 60.989 60.000 3.35 0.00 0.00 5.40
584 1135 2.196304 ATTCGAAGGGGAGAGGGGGT 62.196 60.000 3.35 0.00 0.00 4.95
599 1150 2.840572 GGTTGGTGGCGGGGTTTT 60.841 61.111 0.00 0.00 0.00 2.43
604 1155 4.656117 GTGGCGGGGTTTTTGGCG 62.656 66.667 0.00 0.00 0.00 5.69
606 1157 3.378602 GGCGGGGTTTTTGGCGAT 61.379 61.111 0.00 0.00 0.00 4.58
668 1391 0.038744 ACCCAATTCCTCCTGCTGTG 59.961 55.000 0.00 0.00 0.00 3.66
680 1403 1.021202 CTGCTGTGTTTTCGGGAACA 58.979 50.000 1.20 1.20 37.20 3.18
685 1408 1.521010 TGTTTTCGGGAACACGCGA 60.521 52.632 15.93 5.38 44.58 5.87
689 1412 2.079020 TTTCGGGAACACGCGAGAGT 62.079 55.000 15.93 5.29 46.13 3.24
703 1426 1.201855 CGAGAGTTCGCATTGCTTGAC 60.202 52.381 7.12 2.76 40.36 3.18
706 1429 1.797537 GTTCGCATTGCTTGACGCC 60.798 57.895 7.12 0.00 38.05 5.68
712 1435 1.689959 CATTGCTTGACGCCTTGTTC 58.310 50.000 0.00 0.00 38.05 3.18
714 1437 0.465460 TTGCTTGACGCCTTGTTCCT 60.465 50.000 0.00 0.00 38.05 3.36
716 1439 1.578206 GCTTGACGCCTTGTTCCTCC 61.578 60.000 0.00 0.00 0.00 4.30
718 1441 2.434359 GACGCCTTGTTCCTCCCG 60.434 66.667 0.00 0.00 0.00 5.14
720 1443 2.742372 CGCCTTGTTCCTCCCGTG 60.742 66.667 0.00 0.00 0.00 4.94
721 1444 3.056328 GCCTTGTTCCTCCCGTGC 61.056 66.667 0.00 0.00 0.00 5.34
722 1445 2.429930 CCTTGTTCCTCCCGTGCA 59.570 61.111 0.00 0.00 0.00 4.57
723 1446 1.002134 CCTTGTTCCTCCCGTGCAT 60.002 57.895 0.00 0.00 0.00 3.96
724 1447 1.308069 CCTTGTTCCTCCCGTGCATG 61.308 60.000 0.00 0.00 0.00 4.06
725 1448 1.926511 CTTGTTCCTCCCGTGCATGC 61.927 60.000 11.82 11.82 0.00 4.06
741 1465 1.369091 ATGCCGCGAGCTTGGTTAAG 61.369 55.000 8.23 0.00 44.23 1.85
787 1511 0.246635 AACGCGCCTAACTGAGATGT 59.753 50.000 5.73 0.00 0.00 3.06
788 1512 0.458543 ACGCGCCTAACTGAGATGTG 60.459 55.000 5.73 0.00 0.00 3.21
789 1513 1.756375 CGCGCCTAACTGAGATGTGC 61.756 60.000 0.00 0.00 0.00 4.57
811 1535 8.503196 TGTGCTGTTGTAAGATTTGTGTTATAG 58.497 33.333 0.00 0.00 0.00 1.31
813 1537 8.717821 TGCTGTTGTAAGATTTGTGTTATAGAC 58.282 33.333 0.00 0.00 0.00 2.59
867 1623 2.388232 GCATTCGGTGGACGTGGTC 61.388 63.158 0.00 0.00 44.69 4.02
879 1635 3.775654 GTGGTCGAGGCCTGAGGG 61.776 72.222 12.00 0.00 0.00 4.30
981 1739 0.663153 CGGCCCGAAATTTCATCTCC 59.337 55.000 17.99 11.17 0.00 3.71
1130 1888 4.828296 CCAGCCTGCCATCCCACC 62.828 72.222 0.00 0.00 0.00 4.61
1346 2111 6.503524 TGCTTTAAAACACACTCCTCATTTC 58.496 36.000 0.00 0.00 0.00 2.17
1461 2226 5.352569 CCAGTAGCCTAATTCTGTCAAAGTG 59.647 44.000 0.00 0.00 0.00 3.16
1560 2333 1.873698 TTTAGTCTGGTCGTTGTGCC 58.126 50.000 0.00 0.00 0.00 5.01
1597 2370 3.878160 AACCTCAAGATTCCTCGTCTC 57.122 47.619 0.00 0.00 0.00 3.36
1643 2416 3.835395 TCGAAAAATATTTTGCCCCCACT 59.165 39.130 14.04 0.00 31.09 4.00
1662 2435 4.021719 CCACTGAAGACAATGCTTTTCCAT 60.022 41.667 0.00 0.00 0.00 3.41
1677 2450 5.576774 GCTTTTCCATTGATTTCTTAACCCG 59.423 40.000 0.00 0.00 0.00 5.28
1785 2558 2.480244 CGAACTTCTGCCGATCATGAGA 60.480 50.000 0.09 0.00 0.00 3.27
1860 2633 8.489990 ACAAGTTCTGTCATATTTGATCTCTG 57.510 34.615 0.00 0.00 29.87 3.35
2003 2783 9.823098 GAGCTTGCATTATTTCTGTCATATAAG 57.177 33.333 0.00 0.00 0.00 1.73
2162 2942 6.550938 TTGGAGATGATATGGCAGGTATAG 57.449 41.667 0.00 0.00 0.00 1.31
2172 2952 7.776500 TGATATGGCAGGTATAGCGTACTTATA 59.224 37.037 0.00 0.00 0.00 0.98
2371 3152 7.996385 TCTTTCTGTACTGATCGTGATATCAA 58.004 34.615 7.07 0.00 35.51 2.57
2372 3153 7.915923 TCTTTCTGTACTGATCGTGATATCAAC 59.084 37.037 7.07 0.00 35.51 3.18
2648 3478 1.762708 ACCACCCTATGCCAAATTCG 58.237 50.000 0.00 0.00 0.00 3.34
2670 3500 3.493176 GGTGTTAGTCGTGTTGTAGGGTT 60.493 47.826 0.00 0.00 0.00 4.11
2720 3550 9.339492 GAATAGACCTTATAAAATCTACGTCCG 57.661 37.037 0.00 0.00 0.00 4.79
2760 3590 7.832685 AGTTTAAAACTTCTCTACCAAGGTTGT 59.167 33.333 0.00 0.00 39.04 3.32
2763 3593 5.632034 AACTTCTCTACCAAGGTTGTCTT 57.368 39.130 0.00 0.00 35.79 3.01
2943 5127 4.714308 AGGTTCAAACACAAATTCCCAAGA 59.286 37.500 0.00 0.00 0.00 3.02
2949 5133 3.360867 ACACAAATTCCCAAGACACACA 58.639 40.909 0.00 0.00 0.00 3.72
2957 5141 1.402787 CCAAGACACACAAAGGCCTT 58.597 50.000 13.78 13.78 0.00 4.35
3006 5193 0.034089 GCCTCTTGCCCACCTATGTT 60.034 55.000 0.00 0.00 0.00 2.71
3012 5199 3.118038 TCTTGCCCACCTATGTTACCATC 60.118 47.826 0.00 0.00 32.29 3.51
3035 5222 4.804139 CGCTTGATACTACGAAGGTCAAAT 59.196 41.667 0.00 0.00 33.68 2.32
3215 5409 8.097078 ACTCAAAAGATCTTCAATCAACTCTG 57.903 34.615 8.78 0.00 0.00 3.35
3366 5567 3.458872 CACTCAGTGGTGTGTGTGT 57.541 52.632 0.00 0.00 41.36 3.72
3367 5568 1.009078 CACTCAGTGGTGTGTGTGTG 58.991 55.000 0.00 0.00 41.36 3.82
3368 5569 0.613260 ACTCAGTGGTGTGTGTGTGT 59.387 50.000 0.00 0.00 0.00 3.72
3369 5570 1.009078 CTCAGTGGTGTGTGTGTGTG 58.991 55.000 0.00 0.00 0.00 3.82
3370 5571 0.323302 TCAGTGGTGTGTGTGTGTGT 59.677 50.000 0.00 0.00 0.00 3.72
3371 5572 0.447406 CAGTGGTGTGTGTGTGTGTG 59.553 55.000 0.00 0.00 0.00 3.82
3372 5573 0.036164 AGTGGTGTGTGTGTGTGTGT 59.964 50.000 0.00 0.00 0.00 3.72
3373 5574 0.167908 GTGGTGTGTGTGTGTGTGTG 59.832 55.000 0.00 0.00 0.00 3.82
3374 5575 0.957888 TGGTGTGTGTGTGTGTGTGG 60.958 55.000 0.00 0.00 0.00 4.17
3375 5576 1.653094 GGTGTGTGTGTGTGTGTGGG 61.653 60.000 0.00 0.00 0.00 4.61
3376 5577 1.377856 TGTGTGTGTGTGTGTGGGG 60.378 57.895 0.00 0.00 0.00 4.96
3377 5578 2.118404 GTGTGTGTGTGTGTGGGGG 61.118 63.158 0.00 0.00 0.00 5.40
3402 5608 2.822697 GGGGTCTATATCACTCCCTCC 58.177 57.143 0.00 0.00 38.31 4.30
3431 5637 8.466617 TTTAACTACAAGGCCACTATCAAAAA 57.533 30.769 5.01 0.00 0.00 1.94
3537 5743 0.033781 AAACGTTGCATGCAGCCATT 59.966 45.000 26.20 18.38 44.83 3.16
3603 5809 3.741344 CGAGAGGTTTTCCACACAGTTAG 59.259 47.826 0.00 0.00 43.73 2.34
3647 5854 7.978975 TGGTTTTGTTTTCTGGTATCTGAAAAG 59.021 33.333 18.00 0.00 45.11 2.27
3688 5895 4.482952 ACAAAAACGGAGGGAGTATAGG 57.517 45.455 0.00 0.00 0.00 2.57
3776 5985 3.326747 GCAGTACTGGACTCGTTCAAAT 58.673 45.455 23.95 0.00 35.64 2.32
3779 5988 5.679906 CAGTACTGGACTCGTTCAAATTTG 58.320 41.667 15.49 12.15 35.64 2.32
3780 5989 5.465390 CAGTACTGGACTCGTTCAAATTTGA 59.535 40.000 16.91 16.91 35.64 2.69
3790 5999 3.363341 TTCAAATTTGAACGGTCAGGC 57.637 42.857 26.01 0.00 41.88 4.85
3791 6000 2.302260 TCAAATTTGAACGGTCAGGCA 58.698 42.857 18.45 0.00 34.49 4.75
3872 6082 5.022787 CCCTCTTGAAAATCCAAATACCCA 58.977 41.667 0.00 0.00 0.00 4.51
3915 6125 3.981071 CAGAGGTACTGGACAATGGAA 57.019 47.619 0.00 0.00 41.55 3.53
3956 6166 3.772025 AGGATCAACTTGGTCAGAGGTAG 59.228 47.826 4.42 0.00 0.00 3.18
3972 6182 6.903534 TCAGAGGTAGGGAAGTGATAATTCTT 59.096 38.462 0.00 0.00 0.00 2.52
4024 6234 2.562298 GGAATGGAATGGTGCAGAAACA 59.438 45.455 0.00 0.00 0.00 2.83
4126 6350 7.281100 GCTCATAATTGCTAGACAAGGTTAAGT 59.719 37.037 0.00 0.00 42.87 2.24
4152 6376 4.277423 GGAGATACCAGAGCTAACAGAGAC 59.723 50.000 0.00 0.00 38.79 3.36
4258 6482 3.573967 TCAGCATCACTCACAACTCACTA 59.426 43.478 0.00 0.00 0.00 2.74
4261 6485 2.706555 TCACTCACAACTCACTAGCG 57.293 50.000 0.00 0.00 0.00 4.26
4262 6486 1.269723 TCACTCACAACTCACTAGCGG 59.730 52.381 0.00 0.00 0.00 5.52
4263 6487 1.269723 CACTCACAACTCACTAGCGGA 59.730 52.381 0.00 0.00 0.00 5.54
4265 6489 1.813178 CTCACAACTCACTAGCGGAGA 59.187 52.381 16.52 0.00 36.26 3.71
4267 6491 2.626266 TCACAACTCACTAGCGGAGAAA 59.374 45.455 16.52 0.00 36.26 2.52
4268 6492 2.989840 CACAACTCACTAGCGGAGAAAG 59.010 50.000 16.52 9.17 36.26 2.62
4269 6493 1.996191 CAACTCACTAGCGGAGAAAGC 59.004 52.381 16.52 0.00 36.26 3.51
4279 6503 3.787458 GAGAAAGCTCCTTCGCGG 58.213 61.111 6.13 0.00 35.01 6.46
4280 6504 2.435059 AGAAAGCTCCTTCGCGGC 60.435 61.111 6.13 0.00 34.40 6.53
4281 6505 3.500642 GAAAGCTCCTTCGCGGCC 61.501 66.667 6.13 0.00 34.40 6.13
4302 6526 3.315521 CGTTGGAGCGCTCGATCG 61.316 66.667 29.48 29.48 0.00 3.69
4303 6527 2.102357 GTTGGAGCGCTCGATCGA 59.898 61.111 29.81 18.32 0.00 3.59
4312 6536 3.520268 CTCGATCGAGCATCACGC 58.480 61.111 30.41 0.00 42.91 5.34
4314 6538 0.662672 CTCGATCGAGCATCACGCAT 60.663 55.000 30.41 0.00 46.13 4.73
4315 6539 0.249031 TCGATCGAGCATCACGCATT 60.249 50.000 15.15 0.00 46.13 3.56
4316 6540 0.111398 CGATCGAGCATCACGCATTG 60.111 55.000 10.26 0.00 46.13 2.82
4317 6541 0.234106 GATCGAGCATCACGCATTGG 59.766 55.000 0.00 0.00 46.13 3.16
4318 6542 0.179076 ATCGAGCATCACGCATTGGA 60.179 50.000 0.00 0.00 46.13 3.53
4319 6543 0.390998 TCGAGCATCACGCATTGGAA 60.391 50.000 0.00 0.00 46.13 3.53
4321 6545 1.530441 CGAGCATCACGCATTGGAAAG 60.530 52.381 0.00 0.00 46.13 2.62
4322 6546 0.171903 AGCATCACGCATTGGAAAGC 59.828 50.000 0.00 0.00 46.13 3.51
4324 6548 1.796617 GCATCACGCATTGGAAAGCTC 60.797 52.381 0.00 0.00 41.79 4.09
4325 6549 1.098050 ATCACGCATTGGAAAGCTCC 58.902 50.000 0.00 0.00 42.81 4.70
4328 6552 1.135575 CACGCATTGGAAAGCTCCTTC 60.136 52.381 0.00 0.00 42.94 3.46
4329 6553 0.453390 CGCATTGGAAAGCTCCTTCC 59.547 55.000 9.86 9.86 44.54 3.46
4336 6560 3.636153 GGAAAGCTCCTTCCATGTACT 57.364 47.619 11.62 0.00 43.84 2.73
4337 6561 3.274288 GGAAAGCTCCTTCCATGTACTG 58.726 50.000 11.62 0.00 43.84 2.74
4339 6563 3.902881 AAGCTCCTTCCATGTACTGAG 57.097 47.619 0.00 0.00 0.00 3.35
4340 6564 1.484240 AGCTCCTTCCATGTACTGAGC 59.516 52.381 13.57 13.57 44.17 4.26
4341 6565 1.208052 GCTCCTTCCATGTACTGAGCA 59.792 52.381 15.52 0.00 43.50 4.26
4342 6566 2.158842 GCTCCTTCCATGTACTGAGCAT 60.159 50.000 15.52 0.00 43.50 3.79
4576 6800 2.671070 CCCAGCGTGTCCTTCCAT 59.329 61.111 0.00 0.00 0.00 3.41
4577 6801 1.904771 CCCAGCGTGTCCTTCCATA 59.095 57.895 0.00 0.00 0.00 2.74
4579 6803 1.339631 CCCAGCGTGTCCTTCCATAAA 60.340 52.381 0.00 0.00 0.00 1.40
4582 6806 3.535561 CAGCGTGTCCTTCCATAAATCT 58.464 45.455 0.00 0.00 0.00 2.40
4583 6807 4.442893 CCAGCGTGTCCTTCCATAAATCTA 60.443 45.833 0.00 0.00 0.00 1.98
4584 6808 5.300752 CAGCGTGTCCTTCCATAAATCTAT 58.699 41.667 0.00 0.00 0.00 1.98
4585 6809 5.406780 CAGCGTGTCCTTCCATAAATCTATC 59.593 44.000 0.00 0.00 0.00 2.08
4586 6810 4.691216 GCGTGTCCTTCCATAAATCTATCC 59.309 45.833 0.00 0.00 0.00 2.59
4587 6811 5.511545 GCGTGTCCTTCCATAAATCTATCCT 60.512 44.000 0.00 0.00 0.00 3.24
4588 6812 6.159988 CGTGTCCTTCCATAAATCTATCCTC 58.840 44.000 0.00 0.00 0.00 3.71
4589 6813 6.468543 GTGTCCTTCCATAAATCTATCCTCC 58.531 44.000 0.00 0.00 0.00 4.30
4591 6815 7.455008 GTGTCCTTCCATAAATCTATCCTCCTA 59.545 40.741 0.00 0.00 0.00 2.94
4593 6817 7.676468 GTCCTTCCATAAATCTATCCTCCTACT 59.324 40.741 0.00 0.00 0.00 2.57
4594 6818 7.676043 TCCTTCCATAAATCTATCCTCCTACTG 59.324 40.741 0.00 0.00 0.00 2.74
4595 6819 7.676043 CCTTCCATAAATCTATCCTCCTACTGA 59.324 40.741 0.00 0.00 0.00 3.41
4596 6820 9.094578 CTTCCATAAATCTATCCTCCTACTGAA 57.905 37.037 0.00 0.00 0.00 3.02
4598 6822 9.621239 TCCATAAATCTATCCTCCTACTGAATT 57.379 33.333 0.00 0.00 0.00 2.17
4599 6823 9.883142 CCATAAATCTATCCTCCTACTGAATTC 57.117 37.037 0.00 0.00 0.00 2.17
4603 6827 6.392625 TCTATCCTCCTACTGAATTCAACG 57.607 41.667 9.88 1.20 0.00 4.10
4604 6828 3.247006 TCCTCCTACTGAATTCAACGC 57.753 47.619 9.88 0.00 0.00 4.84
4605 6829 1.927174 CCTCCTACTGAATTCAACGCG 59.073 52.381 9.88 3.53 0.00 6.01
4606 6830 2.607187 CTCCTACTGAATTCAACGCGT 58.393 47.619 5.58 5.58 0.00 6.01
4607 6831 2.333926 TCCTACTGAATTCAACGCGTG 58.666 47.619 14.98 7.52 0.00 5.34
4608 6832 1.393539 CCTACTGAATTCAACGCGTGG 59.606 52.381 14.98 11.08 0.00 4.94
4609 6833 2.066262 CTACTGAATTCAACGCGTGGT 58.934 47.619 14.98 4.66 0.00 4.16
4610 6834 0.586319 ACTGAATTCAACGCGTGGTG 59.414 50.000 14.98 7.95 0.00 4.17
4611 6835 0.725784 CTGAATTCAACGCGTGGTGC 60.726 55.000 14.98 1.46 41.47 5.01
4612 6836 1.163420 TGAATTCAACGCGTGGTGCT 61.163 50.000 14.98 0.00 43.27 4.40
4614 6838 2.128853 AATTCAACGCGTGGTGCTGG 62.129 55.000 14.98 0.00 43.27 4.85
4617 6841 2.032634 CAACGCGTGGTGCTGGTAT 61.033 57.895 14.98 0.00 43.27 2.73
4618 6842 1.740296 AACGCGTGGTGCTGGTATC 60.740 57.895 14.98 0.00 43.27 2.24
4619 6843 2.167398 AACGCGTGGTGCTGGTATCT 62.167 55.000 14.98 0.00 43.27 1.98
4620 6844 1.447838 CGCGTGGTGCTGGTATCTT 60.448 57.895 0.00 0.00 43.27 2.40
4621 6845 1.421410 CGCGTGGTGCTGGTATCTTC 61.421 60.000 0.00 0.00 43.27 2.87
4622 6846 0.108138 GCGTGGTGCTGGTATCTTCT 60.108 55.000 0.00 0.00 41.73 2.85
4623 6847 1.676014 GCGTGGTGCTGGTATCTTCTT 60.676 52.381 0.00 0.00 41.73 2.52
4624 6848 2.271800 CGTGGTGCTGGTATCTTCTTC 58.728 52.381 0.00 0.00 0.00 2.87
4625 6849 2.633488 GTGGTGCTGGTATCTTCTTCC 58.367 52.381 0.00 0.00 0.00 3.46
4626 6850 2.027192 GTGGTGCTGGTATCTTCTTCCA 60.027 50.000 0.00 0.00 0.00 3.53
4629 6853 4.101585 TGGTGCTGGTATCTTCTTCCATAG 59.898 45.833 0.00 0.00 0.00 2.23
4632 6856 6.162777 GTGCTGGTATCTTCTTCCATAGATC 58.837 44.000 0.00 0.00 33.38 2.75
4633 6857 6.014669 GTGCTGGTATCTTCTTCCATAGATCT 60.015 42.308 0.00 0.00 33.38 2.75
4634 6858 6.210385 TGCTGGTATCTTCTTCCATAGATCTC 59.790 42.308 0.00 0.00 33.38 2.75
4635 6859 6.437162 GCTGGTATCTTCTTCCATAGATCTCT 59.563 42.308 0.00 0.00 33.38 3.10
4636 6860 7.362920 GCTGGTATCTTCTTCCATAGATCTCTC 60.363 44.444 0.00 0.00 33.38 3.20
4638 6862 7.888021 TGGTATCTTCTTCCATAGATCTCTCTC 59.112 40.741 0.00 0.00 33.38 3.20
4639 6863 7.065803 GGTATCTTCTTCCATAGATCTCTCTCG 59.934 44.444 0.00 0.00 33.38 4.04
4640 6864 5.312895 TCTTCTTCCATAGATCTCTCTCGG 58.687 45.833 0.00 0.00 32.66 4.63
4642 6866 2.208132 TCCATAGATCTCTCTCGGCC 57.792 55.000 0.00 0.00 32.66 6.13
4643 6867 1.181786 CCATAGATCTCTCTCGGCCC 58.818 60.000 0.00 0.00 32.66 5.80
4644 6868 1.181786 CATAGATCTCTCTCGGCCCC 58.818 60.000 0.00 0.00 32.66 5.80
4645 6869 0.040499 ATAGATCTCTCTCGGCCCCC 59.960 60.000 0.00 0.00 32.66 5.40
4646 6870 1.068943 TAGATCTCTCTCGGCCCCCT 61.069 60.000 0.00 0.00 32.66 4.79
4647 6871 2.123077 ATCTCTCTCGGCCCCCTG 60.123 66.667 0.00 0.00 0.00 4.45
4648 6872 2.648613 GATCTCTCTCGGCCCCCTGA 62.649 65.000 0.00 0.00 0.00 3.86
4649 6873 2.243774 ATCTCTCTCGGCCCCCTGAA 62.244 60.000 0.00 0.00 0.00 3.02
4653 6877 1.615124 TCTCGGCCCCCTGAAATCA 60.615 57.895 0.00 0.00 0.00 2.57
4654 6878 1.153086 CTCGGCCCCCTGAAATCAG 60.153 63.158 0.00 3.37 43.40 2.90
4655 6879 2.830370 CGGCCCCCTGAAATCAGC 60.830 66.667 4.87 0.00 42.47 4.26
4656 6880 2.830370 GGCCCCCTGAAATCAGCG 60.830 66.667 4.87 0.00 42.47 5.18
4657 6881 2.830370 GCCCCCTGAAATCAGCGG 60.830 66.667 7.07 7.07 42.47 5.52
4659 6883 2.677228 CCCCTGAAATCAGCGGGT 59.323 61.111 20.37 0.00 43.53 5.28
4660 6884 1.750399 CCCCTGAAATCAGCGGGTG 60.750 63.158 20.37 0.00 43.53 4.61
4661 6885 1.750399 CCCTGAAATCAGCGGGTGG 60.750 63.158 7.42 0.00 42.47 4.61
4662 6886 1.750399 CCTGAAATCAGCGGGTGGG 60.750 63.158 7.42 0.00 42.47 4.61
4663 6887 1.750399 CTGAAATCAGCGGGTGGGG 60.750 63.158 7.42 0.00 37.15 4.96
4664 6888 3.140814 GAAATCAGCGGGTGGGGC 61.141 66.667 7.42 0.00 0.00 5.80
4665 6889 4.759205 AAATCAGCGGGTGGGGCC 62.759 66.667 7.42 0.00 0.00 5.80
4677 6901 4.839706 GGGGCCCGGTGCATCATT 62.840 66.667 17.79 0.00 43.89 2.57
4679 6903 1.454847 GGGCCCGGTGCATCATTTA 60.455 57.895 5.69 0.00 43.89 1.40
4680 6904 1.040339 GGGCCCGGTGCATCATTTAA 61.040 55.000 5.69 0.00 43.89 1.52
4681 6905 1.039856 GGCCCGGTGCATCATTTAAT 58.960 50.000 15.49 0.00 43.89 1.40
4682 6906 1.412343 GGCCCGGTGCATCATTTAATT 59.588 47.619 15.49 0.00 43.89 1.40
4683 6907 2.158971 GGCCCGGTGCATCATTTAATTT 60.159 45.455 15.49 0.00 43.89 1.82
4684 6908 3.530535 GCCCGGTGCATCATTTAATTTT 58.469 40.909 9.72 0.00 40.77 1.82
4685 6909 3.555547 GCCCGGTGCATCATTTAATTTTC 59.444 43.478 9.72 0.00 40.77 2.29
4686 6910 4.680440 GCCCGGTGCATCATTTAATTTTCT 60.680 41.667 9.72 0.00 40.77 2.52
4687 6911 5.043248 CCCGGTGCATCATTTAATTTTCTC 58.957 41.667 0.00 0.00 0.00 2.87
4688 6912 5.163519 CCCGGTGCATCATTTAATTTTCTCT 60.164 40.000 0.00 0.00 0.00 3.10
4689 6913 5.973565 CCGGTGCATCATTTAATTTTCTCTC 59.026 40.000 0.00 0.00 0.00 3.20
4690 6914 6.404623 CCGGTGCATCATTTAATTTTCTCTCA 60.405 38.462 0.00 0.00 0.00 3.27
4691 6915 6.470235 CGGTGCATCATTTAATTTTCTCTCAC 59.530 38.462 0.00 0.00 0.00 3.51
4693 6917 6.753744 GTGCATCATTTAATTTTCTCTCACCC 59.246 38.462 0.00 0.00 0.00 4.61
4694 6918 6.664816 TGCATCATTTAATTTTCTCTCACCCT 59.335 34.615 0.00 0.00 0.00 4.34
4695 6919 6.976925 GCATCATTTAATTTTCTCTCACCCTG 59.023 38.462 0.00 0.00 0.00 4.45
4696 6920 7.148018 GCATCATTTAATTTTCTCTCACCCTGA 60.148 37.037 0.00 0.00 0.00 3.86
4697 6921 8.910944 CATCATTTAATTTTCTCTCACCCTGAT 58.089 33.333 0.00 0.00 0.00 2.90
4699 6923 9.973661 TCATTTAATTTTCTCTCACCCTGATTA 57.026 29.630 0.00 0.00 0.00 1.75
4702 6926 9.753674 TTTAATTTTCTCTCACCCTGATTATGT 57.246 29.630 0.00 0.00 0.00 2.29
4703 6927 7.636150 AATTTTCTCTCACCCTGATTATGTG 57.364 36.000 0.00 0.00 0.00 3.21
4704 6928 5.762179 TTTCTCTCACCCTGATTATGTGT 57.238 39.130 0.00 0.00 0.00 3.72
4706 6930 6.867519 TTCTCTCACCCTGATTATGTGTAA 57.132 37.500 0.00 0.00 0.00 2.41
4707 6931 6.867519 TCTCTCACCCTGATTATGTGTAAA 57.132 37.500 0.00 0.00 0.00 2.01
4708 6932 7.252612 TCTCTCACCCTGATTATGTGTAAAA 57.747 36.000 0.00 0.00 0.00 1.52
4709 6933 7.331026 TCTCTCACCCTGATTATGTGTAAAAG 58.669 38.462 0.00 0.00 0.00 2.27
4710 6934 6.414732 TCTCACCCTGATTATGTGTAAAAGG 58.585 40.000 0.00 0.00 31.90 3.11
4711 6935 6.214615 TCTCACCCTGATTATGTGTAAAAGGA 59.785 38.462 0.00 0.00 33.00 3.36
4714 6938 7.175990 TCACCCTGATTATGTGTAAAAGGAAAC 59.824 37.037 0.00 0.00 33.00 2.78
4775 7733 1.174712 TCTTGCAGCAACTTGAGGGC 61.175 55.000 2.83 0.00 0.00 5.19
4911 7898 8.288689 TGCCCCTTTAAATGATCTTTAGTTAC 57.711 34.615 0.00 0.00 0.00 2.50
4999 7986 7.773690 ACAACCCCAGTAGTATCAAATGTATTC 59.226 37.037 0.00 0.00 0.00 1.75
5130 8117 9.450807 GCTGTTTGCTAATTACCACTATATTTG 57.549 33.333 0.00 0.00 38.95 2.32
5225 8212 3.861840 TGCACCTCTACTAATGCTTGAC 58.138 45.455 0.00 0.00 38.90 3.18
5300 8287 9.988815 TTACATCTCTTTATTATCTTCTGGAGC 57.011 33.333 0.00 0.00 0.00 4.70
5348 8337 6.147821 GCATGTGTATGTTGGATACTGGATAC 59.852 42.308 0.00 0.00 36.65 2.24
5388 8378 5.221028 CCATAACAAGTGCAGTTTTGAGACA 60.221 40.000 3.38 0.00 32.10 3.41
5400 8390 7.014134 TGCAGTTTTGAGACAAAGAATAATGGA 59.986 33.333 0.00 0.00 0.00 3.41
5434 8424 8.613482 GGTAACCTAAGATTATCAGAAGTTTGC 58.387 37.037 0.00 0.00 0.00 3.68
5480 8470 7.609760 TTGCACTTATTCGATGTATTGAAGT 57.390 32.000 0.00 0.00 33.92 3.01
5548 8538 2.380571 ATTCAGGGCCAAACGGGGTT 62.381 55.000 6.18 0.00 37.04 4.11
5601 8591 6.691508 ACTTTCTCCATTTCAAATTACAGGC 58.308 36.000 0.00 0.00 0.00 4.85
5602 8592 6.494835 ACTTTCTCCATTTCAAATTACAGGCT 59.505 34.615 0.00 0.00 0.00 4.58
5756 8747 3.701205 TGCATGCCTTCAAGTCTCTAA 57.299 42.857 16.68 0.00 0.00 2.10
5766 8757 2.832129 TCAAGTCTCTAAATGCCCGAGT 59.168 45.455 0.00 0.00 0.00 4.18
5795 8786 4.340666 TCCTGCATGCACTTTTACTTGAAA 59.659 37.500 18.46 0.00 0.00 2.69
5983 9035 8.618702 TTACCGGTGTTATGTTTTTCTTATCA 57.381 30.769 19.93 0.00 0.00 2.15
6254 9306 2.290960 GCACCCTCCAACCATTAGAACT 60.291 50.000 0.00 0.00 0.00 3.01
6317 9369 9.593134 AAGAAATGTGTGTATAGATGAGTCTTC 57.407 33.333 0.00 0.00 35.87 2.87
6331 9383 3.576982 TGAGTCTTCGAGGTAAACCACAT 59.423 43.478 1.26 0.00 38.89 3.21
6348 9400 7.931015 AACCACATATACCATTAGAGAGGAA 57.069 36.000 0.00 0.00 0.00 3.36
6349 9401 7.546250 ACCACATATACCATTAGAGAGGAAG 57.454 40.000 0.00 0.00 0.00 3.46
6350 9402 7.306013 ACCACATATACCATTAGAGAGGAAGA 58.694 38.462 0.00 0.00 0.00 2.87
6351 9403 7.453126 ACCACATATACCATTAGAGAGGAAGAG 59.547 40.741 0.00 0.00 0.00 2.85
6352 9404 7.671819 CCACATATACCATTAGAGAGGAAGAGA 59.328 40.741 0.00 0.00 0.00 3.10
6353 9405 8.739039 CACATATACCATTAGAGAGGAAGAGAG 58.261 40.741 0.00 0.00 0.00 3.20
6354 9406 8.674173 ACATATACCATTAGAGAGGAAGAGAGA 58.326 37.037 0.00 0.00 0.00 3.10
6355 9407 9.177608 CATATACCATTAGAGAGGAAGAGAGAG 57.822 40.741 0.00 0.00 0.00 3.20
6356 9408 5.725551 ACCATTAGAGAGGAAGAGAGAGA 57.274 43.478 0.00 0.00 0.00 3.10
6357 9409 5.694995 ACCATTAGAGAGGAAGAGAGAGAG 58.305 45.833 0.00 0.00 0.00 3.20
6358 9410 5.072741 CCATTAGAGAGGAAGAGAGAGAGG 58.927 50.000 0.00 0.00 0.00 3.69
6359 9411 4.788925 TTAGAGAGGAAGAGAGAGAGGG 57.211 50.000 0.00 0.00 0.00 4.30
6360 9412 2.858644 AGAGAGGAAGAGAGAGAGGGA 58.141 52.381 0.00 0.00 0.00 4.20
6361 9413 2.780010 AGAGAGGAAGAGAGAGAGGGAG 59.220 54.545 0.00 0.00 0.00 4.30
6362 9414 1.852965 AGAGGAAGAGAGAGAGGGAGG 59.147 57.143 0.00 0.00 0.00 4.30
6363 9415 0.933700 AGGAAGAGAGAGAGGGAGGG 59.066 60.000 0.00 0.00 0.00 4.30
6364 9416 0.930726 GGAAGAGAGAGAGGGAGGGA 59.069 60.000 0.00 0.00 0.00 4.20
6365 9417 1.133482 GGAAGAGAGAGAGGGAGGGAG 60.133 61.905 0.00 0.00 0.00 4.30
6366 9418 0.933700 AAGAGAGAGAGGGAGGGAGG 59.066 60.000 0.00 0.00 0.00 4.30
6383 9459 3.268330 GGAGGGAGTATCGTTTTGAACC 58.732 50.000 0.00 0.00 34.37 3.62
6410 9486 0.370273 GCACATGTAGAAAGCGGACG 59.630 55.000 0.00 0.00 0.00 4.79
6475 9633 1.722677 GTTGTTTCCAACGTGGCGA 59.277 52.632 0.00 0.00 41.41 5.54
6501 9659 5.654650 AGTCACTGATGTTTAACCAACCAAA 59.345 36.000 0.00 0.00 33.97 3.28
6607 9765 2.678336 GGTAAATGCACTTCTCTTCCCG 59.322 50.000 0.00 0.00 0.00 5.14
6673 9831 1.202879 ACTTGCACTTCCCCGAATGAA 60.203 47.619 0.00 0.00 0.00 2.57
6718 9876 1.205893 GCACTGTCTACTCCAGGGAAG 59.794 57.143 0.00 0.00 35.26 3.46
6757 9915 0.526096 AGCAGTGCAACAACAAAGCG 60.526 50.000 19.20 0.00 41.43 4.68
6907 10065 7.000472 TCAACTTCATGAAGGATCAGAAAAGT 59.000 34.615 33.11 10.87 42.53 2.66
6933 10091 3.099267 AGTGACACCTTTCTCAACTCG 57.901 47.619 0.84 0.00 0.00 4.18
7060 10218 3.958860 GTGGCCAGCCTCACAGGT 61.959 66.667 5.11 0.00 37.80 4.00
7177 10335 3.865745 CGTCCGTTGAATCTGAAGCTAAT 59.134 43.478 0.00 0.00 0.00 1.73
7227 10385 2.495669 TCGCAGGTCTGTCACATGAATA 59.504 45.455 0.00 0.00 39.27 1.75
7240 10398 8.735692 TGTCACATGAATATTTATCAGCTTCA 57.264 30.769 0.00 0.00 0.00 3.02
7256 10414 4.278170 CAGCTTCACTGTTTTGTGGGATTA 59.722 41.667 0.00 0.00 41.86 1.75
7304 10476 3.635836 GCATAAGTAACTACTCCCTCCGT 59.364 47.826 0.00 0.00 34.99 4.69
7305 10477 4.099113 GCATAAGTAACTACTCCCTCCGTT 59.901 45.833 0.00 0.00 34.99 4.44
7306 10478 5.735638 GCATAAGTAACTACTCCCTCCGTTC 60.736 48.000 0.00 0.00 34.99 3.95
7307 10479 2.732763 AGTAACTACTCCCTCCGTTCC 58.267 52.381 0.00 0.00 0.00 3.62
7308 10480 2.311243 AGTAACTACTCCCTCCGTTCCT 59.689 50.000 0.00 0.00 0.00 3.36
7309 10481 3.525199 AGTAACTACTCCCTCCGTTCCTA 59.475 47.826 0.00 0.00 0.00 2.94
7310 10482 3.463048 AACTACTCCCTCCGTTCCTAA 57.537 47.619 0.00 0.00 0.00 2.69
7311 10483 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
7312 10484 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
7313 10485 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
7314 10486 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
7315 10487 6.856757 ACTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
7316 10488 7.300658 ACTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
7317 10489 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
7318 10490 5.011840 ACTCCCTCCGTTCCTAAATATAAGC 59.988 44.000 0.00 0.00 0.00 3.09
7319 10491 4.903049 TCCCTCCGTTCCTAAATATAAGCA 59.097 41.667 0.00 0.00 0.00 3.91
7368 10540 6.802608 ACATATGGAGCAAAATGAGTGAATG 58.197 36.000 7.80 0.00 0.00 2.67
7373 10545 5.711506 TGGAGCAAAATGAGTGAATGTACAT 59.288 36.000 1.41 1.41 0.00 2.29
7388 10560 9.901724 GTGAATGTACATTCTAAAATACGTCTG 57.098 33.333 36.15 0.00 45.55 3.51
7545 10720 2.108250 ACCTGTCCTGTGTATTGCCTTT 59.892 45.455 0.00 0.00 0.00 3.11
7556 10731 3.195396 TGTATTGCCTTTTTGGAGGATGC 59.805 43.478 0.00 0.00 39.25 3.91
7592 12856 7.334421 TCTGTTTTATCTTCTCTCCATTTTCGG 59.666 37.037 0.00 0.00 0.00 4.30
7613 12877 3.189702 GGTTGCAGCGAAACTAATTACCA 59.810 43.478 0.00 0.00 0.00 3.25
7724 12988 7.504924 TTGGTGTTATTTTCATTCGAGTCTT 57.495 32.000 0.00 0.00 0.00 3.01
7767 13031 8.131100 TCATGTCACAGTTCATTTTTCTTCTTC 58.869 33.333 0.00 0.00 0.00 2.87
7825 13089 3.876341 CCATAAATGTGCCTGCCAAAAT 58.124 40.909 0.00 0.00 0.00 1.82
7898 13162 6.929625 TGAAAATTGTTTCCAGTTTCTGTCA 58.070 32.000 0.00 0.00 42.20 3.58
7903 13167 5.560966 TGTTTCCAGTTTCTGTCAGTTTC 57.439 39.130 0.00 0.00 0.00 2.78
7904 13168 5.253330 TGTTTCCAGTTTCTGTCAGTTTCT 58.747 37.500 0.00 0.00 0.00 2.52
7905 13169 5.123820 TGTTTCCAGTTTCTGTCAGTTTCTG 59.876 40.000 0.00 6.80 0.00 3.02
7906 13170 4.487714 TCCAGTTTCTGTCAGTTTCTGT 57.512 40.909 0.00 0.00 32.61 3.41
7907 13171 5.607939 TCCAGTTTCTGTCAGTTTCTGTA 57.392 39.130 0.00 0.00 32.61 2.74
7908 13172 5.984725 TCCAGTTTCTGTCAGTTTCTGTAA 58.015 37.500 0.00 0.00 32.61 2.41
7909 13173 5.815740 TCCAGTTTCTGTCAGTTTCTGTAAC 59.184 40.000 0.00 0.00 36.99 2.50
7911 13175 6.984474 CCAGTTTCTGTCAGTTTCTGTAACTA 59.016 38.462 0.00 0.00 45.29 2.24
7912 13176 7.494625 CCAGTTTCTGTCAGTTTCTGTAACTAA 59.505 37.037 0.00 0.00 45.29 2.24
7913 13177 9.046296 CAGTTTCTGTCAGTTTCTGTAACTAAT 57.954 33.333 0.00 0.00 45.29 1.73
7914 13178 9.046296 AGTTTCTGTCAGTTTCTGTAACTAATG 57.954 33.333 0.00 0.00 45.29 1.90
7915 13179 8.827677 GTTTCTGTCAGTTTCTGTAACTAATGT 58.172 33.333 0.00 0.00 45.29 2.71
7918 13182 9.856488 TCTGTCAGTTTCTGTAACTAATGTATC 57.144 33.333 0.00 0.00 45.29 2.24
7919 13183 9.862371 CTGTCAGTTTCTGTAACTAATGTATCT 57.138 33.333 0.00 0.00 45.29 1.98
7950 13214 5.358298 AGTTATTTCTCTGTTTGGAACGC 57.642 39.130 0.00 0.00 0.00 4.84
8217 13483 2.423231 CCACATCATCCCATGCCTTGTA 60.423 50.000 0.00 0.00 0.00 2.41
8405 13682 1.296715 CTTTACCTCGCTGGCTGGT 59.703 57.895 10.68 10.68 40.22 4.00
8497 13774 1.418373 CATTGTCTTCACAGCGACGA 58.582 50.000 0.00 0.00 32.71 4.20
8520 13797 1.586154 CGGTTGCCAAAAGGCTCGAT 61.586 55.000 8.11 0.00 35.66 3.59
8587 13865 1.152138 GCATGGATCCTGGATGGCA 59.848 57.895 15.25 0.00 35.26 4.92
8602 13880 2.265739 GCATGTGGAGCTCGTGGA 59.734 61.111 7.83 0.00 0.00 4.02
8610 13888 0.532573 GGAGCTCGTGGACAAGATCA 59.467 55.000 7.83 0.00 29.55 2.92
8611 13889 1.066858 GGAGCTCGTGGACAAGATCAA 60.067 52.381 7.83 0.00 29.55 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.965754 ATCAGGGAGAGCAAGACCGC 61.966 60.000 0.00 0.00 0.00 5.68
118 656 3.705604 GTTGTTGACCATGTTCCTGTTG 58.294 45.455 0.00 0.00 0.00 3.33
256 802 5.335269 CGAAGATGCAGTAGATATTCTCGGT 60.335 44.000 0.00 0.00 0.00 4.69
264 815 6.993308 AGAACTACTCGAAGATGCAGTAGATA 59.007 38.462 12.45 0.00 41.48 1.98
390 941 6.154534 ACAGTTAGCTCACATATCACTGGTTA 59.845 38.462 0.03 0.00 35.50 2.85
399 950 5.682471 GCCACACTACAGTTAGCTCACATAT 60.682 44.000 0.03 0.00 0.00 1.78
413 964 1.346395 CACTACCAAGGCCACACTACA 59.654 52.381 5.01 0.00 0.00 2.74
447 998 2.901192 TCTCCGACACCCTAATGTTTCA 59.099 45.455 0.00 0.00 31.24 2.69
451 1002 2.761208 CTCTTCTCCGACACCCTAATGT 59.239 50.000 0.00 0.00 34.78 2.71
455 1006 0.039180 TGCTCTTCTCCGACACCCTA 59.961 55.000 0.00 0.00 0.00 3.53
457 1008 1.216710 CTGCTCTTCTCCGACACCC 59.783 63.158 0.00 0.00 0.00 4.61
519 1070 3.269178 CCGACGAGAAGGTAAGTAGAGT 58.731 50.000 0.00 0.00 0.00 3.24
524 1075 1.901591 TCACCGACGAGAAGGTAAGT 58.098 50.000 0.00 0.00 39.00 2.24
569 1120 2.309504 CCAACCCCCTCTCCCCTTC 61.310 68.421 0.00 0.00 0.00 3.46
581 1132 4.926162 AAACCCCGCCACCAACCC 62.926 66.667 0.00 0.00 0.00 4.11
583 1134 1.227409 CAAAAACCCCGCCACCAAC 60.227 57.895 0.00 0.00 0.00 3.77
584 1135 2.435693 CCAAAAACCCCGCCACCAA 61.436 57.895 0.00 0.00 0.00 3.67
604 1155 2.640316 ATTTACCCCTTCGGCTCATC 57.360 50.000 0.00 0.00 33.26 2.92
606 1157 3.109151 TCTTATTTACCCCTTCGGCTCA 58.891 45.455 0.00 0.00 33.26 4.26
668 1391 1.203313 CTCGCGTGTTCCCGAAAAC 59.797 57.895 5.77 0.00 32.56 2.43
685 1408 0.792640 CGTCAAGCAATGCGAACTCT 59.207 50.000 0.00 0.00 32.61 3.24
703 1426 2.742372 CACGGGAGGAACAAGGCG 60.742 66.667 0.00 0.00 0.00 5.52
706 1429 1.926511 GCATGCACGGGAGGAACAAG 61.927 60.000 14.21 0.00 0.00 3.16
718 1441 4.824166 CAAGCTCGCGGCATGCAC 62.824 66.667 21.36 10.08 46.97 4.57
721 1444 1.643868 TTAACCAAGCTCGCGGCATG 61.644 55.000 19.30 17.02 44.79 4.06
722 1445 1.369091 CTTAACCAAGCTCGCGGCAT 61.369 55.000 19.30 6.88 44.79 4.40
723 1446 2.031314 TTAACCAAGCTCGCGGCA 59.969 55.556 19.30 0.00 44.79 5.69
724 1447 1.696832 CTCTTAACCAAGCTCGCGGC 61.697 60.000 6.13 9.11 42.19 6.53
725 1448 0.108804 TCTCTTAACCAAGCTCGCGG 60.109 55.000 6.13 0.00 0.00 6.46
736 1460 7.905493 CGACTGAATTAGCCAATTTCTCTTAAC 59.095 37.037 0.00 0.00 34.44 2.01
741 1465 5.803020 ACGACTGAATTAGCCAATTTCTC 57.197 39.130 0.00 0.00 34.44 2.87
772 1496 1.284657 CAGCACATCTCAGTTAGGCG 58.715 55.000 0.00 0.00 0.00 5.52
787 1511 8.717821 GTCTATAACACAAATCTTACAACAGCA 58.282 33.333 0.00 0.00 0.00 4.41
788 1512 8.175716 GGTCTATAACACAAATCTTACAACAGC 58.824 37.037 0.00 0.00 0.00 4.40
789 1513 9.214957 TGGTCTATAACACAAATCTTACAACAG 57.785 33.333 0.00 0.00 0.00 3.16
811 1535 3.619233 ATGTGCGTTTACTGTTTGGTC 57.381 42.857 0.00 0.00 0.00 4.02
813 1537 3.958704 TGAATGTGCGTTTACTGTTTGG 58.041 40.909 0.00 0.00 0.00 3.28
867 1623 2.507944 CATTCCCCTCAGGCCTCG 59.492 66.667 0.00 0.00 34.51 4.63
879 1635 1.379527 CGTTTGGTAGCCTCCATTCC 58.620 55.000 0.00 0.00 37.33 3.01
1130 1888 2.498078 GAGTGAGTTAGGAGGGGACTTG 59.502 54.545 0.00 0.00 44.43 3.16
1222 1987 3.911698 CGCCGATGATCACCGGGA 61.912 66.667 29.63 0.00 45.42 5.14
1346 2111 4.037208 GTGATCCAAGCTATCAATTGGTGG 59.963 45.833 5.42 0.77 45.16 4.61
1461 2226 3.117851 GGGGATATATCCTAGCAAAGCCC 60.118 52.174 27.21 14.84 46.35 5.19
1560 2333 2.100087 AGGTTTGCCAAGTTTACGGTTG 59.900 45.455 0.00 0.00 37.19 3.77
1643 2416 5.787953 TCAATGGAAAAGCATTGTCTTCA 57.212 34.783 0.00 0.00 39.20 3.02
1662 2435 7.753309 TGAAAATCTCGGGTTAAGAAATCAA 57.247 32.000 0.00 0.00 0.00 2.57
1785 2558 4.712051 TTATCTGCAGATGCCAATACCT 57.288 40.909 34.48 11.54 41.18 3.08
2003 2783 7.647907 TGGTATTCGACTCAAACTTTACTTC 57.352 36.000 0.00 0.00 0.00 3.01
2007 2787 8.610248 TCAAATGGTATTCGACTCAAACTTTA 57.390 30.769 0.00 0.00 0.00 1.85
2162 2942 9.310716 AGAAAAACTAGGTCAATATAAGTACGC 57.689 33.333 0.00 0.00 0.00 4.42
2214 2994 1.909986 AGGCAGGAAAGGGAAGAGTAC 59.090 52.381 0.00 0.00 0.00 2.73
2352 3133 5.845391 TGGTTGATATCACGATCAGTACA 57.155 39.130 4.48 0.00 37.16 2.90
2371 3152 9.930158 ACTGGGTTTAACATACAAATATATGGT 57.070 29.630 0.00 0.00 36.95 3.55
2607 3437 2.689553 TGAGCTATTTGATCACCGCA 57.310 45.000 0.00 0.00 36.01 5.69
2648 3478 2.036346 ACCCTACAACACGACTAACACC 59.964 50.000 0.00 0.00 0.00 4.16
2670 3500 3.632645 CCCCCTTCTAGACCATAACCTCA 60.633 52.174 0.00 0.00 0.00 3.86
2760 3590 0.690762 GTTGTGTAGGCTCCCCAAGA 59.309 55.000 0.00 0.00 0.00 3.02
2763 3593 0.400213 CTTGTTGTGTAGGCTCCCCA 59.600 55.000 0.00 0.00 0.00 4.96
2905 5089 2.967201 TGAACCTTTACCAACGAGGAGA 59.033 45.455 5.70 0.00 41.22 3.71
2943 5127 0.975040 TTGCCAAGGCCTTTGTGTGT 60.975 50.000 17.61 0.00 41.09 3.72
2957 5141 0.320374 CTTAGTGGTCGACCTTGCCA 59.680 55.000 33.39 12.03 36.82 4.92
3006 5193 4.023450 CCTTCGTAGTATCAAGCGATGGTA 60.023 45.833 0.00 0.00 41.03 3.25
3012 5199 3.416119 TGACCTTCGTAGTATCAAGCG 57.584 47.619 0.00 0.00 0.00 4.68
3035 5222 1.835531 GAAGATCAACCCCGGTTAGGA 59.164 52.381 0.00 0.00 45.00 2.94
3215 5409 4.898861 AGAGAGACCCTATGGATTCTTGAC 59.101 45.833 0.00 0.00 34.81 3.18
3381 5582 2.560158 GGAGGGAGTGATATAGACCCCC 60.560 59.091 0.00 0.00 41.26 5.40
3402 5608 3.143728 AGTGGCCTTGTAGTTAAAACCG 58.856 45.455 3.32 0.00 0.00 4.44
3483 5689 5.625197 GCACCATCATACAAGGCAAAAATCT 60.625 40.000 0.00 0.00 0.00 2.40
3537 5743 2.189594 CATGTGGTGCCTCTTTCTCA 57.810 50.000 0.00 0.00 0.00 3.27
3603 5809 8.520351 ACAAAACCAACTAATAAATAGCAGGAC 58.480 33.333 0.00 0.00 34.78 3.85
3647 5854 7.801716 TTTGTATACAAGGCCATTATCTCAC 57.198 36.000 17.36 0.00 37.15 3.51
3688 5895 4.489679 ACGGTCAGATTTCTGCTTTTTC 57.510 40.909 2.60 0.00 43.46 2.29
3776 5985 0.181587 TTCCTGCCTGACCGTTCAAA 59.818 50.000 0.00 0.00 0.00 2.69
3779 5988 1.314730 TTTTTCCTGCCTGACCGTTC 58.685 50.000 0.00 0.00 0.00 3.95
3780 5989 1.613437 CATTTTTCCTGCCTGACCGTT 59.387 47.619 0.00 0.00 0.00 4.44
3782 5991 1.200020 GTCATTTTTCCTGCCTGACCG 59.800 52.381 0.00 0.00 32.08 4.79
3783 5992 2.519013 AGTCATTTTTCCTGCCTGACC 58.481 47.619 0.00 0.00 37.52 4.02
3785 5994 5.385198 AGTAAAGTCATTTTTCCTGCCTGA 58.615 37.500 0.00 0.00 0.00 3.86
3787 5996 5.011023 CCAAGTAAAGTCATTTTTCCTGCCT 59.989 40.000 0.00 0.00 0.00 4.75
3788 5997 5.010617 TCCAAGTAAAGTCATTTTTCCTGCC 59.989 40.000 0.00 0.00 0.00 4.85
3790 5999 6.265422 ACCTCCAAGTAAAGTCATTTTTCCTG 59.735 38.462 0.00 0.00 0.00 3.86
3791 6000 6.265422 CACCTCCAAGTAAAGTCATTTTTCCT 59.735 38.462 0.00 0.00 0.00 3.36
3872 6082 1.353022 TCTTTTGCATTCGGTACCCCT 59.647 47.619 6.25 0.00 0.00 4.79
3915 6125 7.058525 TGATCCTTCATGCAGAAATGAACTAT 58.941 34.615 0.00 0.00 40.72 2.12
3956 6166 5.163612 GCACTTCCAAGAATTATCACTTCCC 60.164 44.000 0.00 0.00 0.00 3.97
3972 6182 1.202099 TATTGACCCCGGCACTTCCA 61.202 55.000 0.00 0.00 34.01 3.53
4104 6328 7.280205 CCGAACTTAACCTTGTCTAGCAATTAT 59.720 37.037 0.97 0.00 36.36 1.28
4126 6350 3.628008 TGTTAGCTCTGGTATCTCCGAA 58.372 45.455 0.00 0.00 39.52 4.30
4152 6376 3.214328 AGCTTTTGTCCTACCAAGTGTG 58.786 45.455 0.00 0.00 0.00 3.82
4192 6416 1.133363 TTTCCCAGGACAACCGAGAA 58.867 50.000 0.00 0.00 41.83 2.87
4262 6486 2.456948 GCCGCGAAGGAGCTTTCTC 61.457 63.158 8.23 0.00 45.00 2.87
4263 6487 2.435059 GCCGCGAAGGAGCTTTCT 60.435 61.111 8.23 0.00 45.00 2.52
4265 6489 4.329545 TGGCCGCGAAGGAGCTTT 62.330 61.111 8.23 0.00 45.00 3.51
4287 6511 2.409243 CTCGATCGAGCGCTCCAA 59.591 61.111 30.41 19.78 35.31 3.53
4295 6519 0.662672 ATGCGTGATGCTCGATCGAG 60.663 55.000 35.25 35.25 46.63 4.04
4296 6520 0.249031 AATGCGTGATGCTCGATCGA 60.249 50.000 18.32 18.32 46.63 3.59
4297 6521 0.111398 CAATGCGTGATGCTCGATCG 60.111 55.000 9.36 9.36 46.63 3.69
4298 6522 0.234106 CCAATGCGTGATGCTCGATC 59.766 55.000 0.00 0.00 46.63 3.69
4299 6523 0.179076 TCCAATGCGTGATGCTCGAT 60.179 50.000 0.00 0.00 46.63 3.59
4300 6524 0.390998 TTCCAATGCGTGATGCTCGA 60.391 50.000 0.00 0.00 46.63 4.04
4301 6525 0.447406 TTTCCAATGCGTGATGCTCG 59.553 50.000 0.00 0.00 46.63 5.03
4302 6526 1.796617 GCTTTCCAATGCGTGATGCTC 60.797 52.381 0.00 0.00 46.63 4.26
4303 6527 0.171903 GCTTTCCAATGCGTGATGCT 59.828 50.000 0.00 0.00 46.63 3.79
4305 6529 1.202222 GGAGCTTTCCAATGCGTGATG 60.202 52.381 0.00 0.00 34.59 3.07
4307 6531 0.036732 AGGAGCTTTCCAATGCGTGA 59.963 50.000 0.00 0.00 34.59 4.35
4308 6532 0.883833 AAGGAGCTTTCCAATGCGTG 59.116 50.000 0.00 0.00 34.59 5.34
4309 6533 1.168714 GAAGGAGCTTTCCAATGCGT 58.831 50.000 0.00 0.00 34.59 5.24
4310 6534 0.453390 GGAAGGAGCTTTCCAATGCG 59.547 55.000 11.62 0.00 44.90 4.73
4316 6540 3.055094 TCAGTACATGGAAGGAGCTTTCC 60.055 47.826 9.86 9.86 45.59 3.13
4317 6541 4.187694 CTCAGTACATGGAAGGAGCTTTC 58.812 47.826 0.00 0.00 0.00 2.62
4318 6542 3.620966 GCTCAGTACATGGAAGGAGCTTT 60.621 47.826 19.85 0.00 43.21 3.51
4319 6543 2.093235 GCTCAGTACATGGAAGGAGCTT 60.093 50.000 19.85 0.00 43.21 3.74
4321 6545 1.208052 TGCTCAGTACATGGAAGGAGC 59.792 52.381 20.17 20.17 45.89 4.70
4322 6546 3.834489 ATGCTCAGTACATGGAAGGAG 57.166 47.619 0.00 0.00 0.00 3.69
4558 6782 2.252072 TATGGAAGGACACGCTGGGC 62.252 60.000 0.00 0.00 0.00 5.36
4560 6784 2.107950 TTTATGGAAGGACACGCTGG 57.892 50.000 0.00 0.00 0.00 4.85
4561 6785 3.535561 AGATTTATGGAAGGACACGCTG 58.464 45.455 0.00 0.00 0.00 5.18
4563 6787 4.691216 GGATAGATTTATGGAAGGACACGC 59.309 45.833 0.00 0.00 0.00 5.34
4565 6789 6.271159 AGGAGGATAGATTTATGGAAGGACAC 59.729 42.308 0.00 0.00 0.00 3.67
4568 6792 7.676043 CAGTAGGAGGATAGATTTATGGAAGGA 59.324 40.741 0.00 0.00 0.00 3.36
4569 6793 7.676043 TCAGTAGGAGGATAGATTTATGGAAGG 59.324 40.741 0.00 0.00 0.00 3.46
4570 6794 8.657387 TCAGTAGGAGGATAGATTTATGGAAG 57.343 38.462 0.00 0.00 0.00 3.46
4571 6795 9.621239 ATTCAGTAGGAGGATAGATTTATGGAA 57.379 33.333 0.00 0.00 0.00 3.53
4572 6796 9.621239 AATTCAGTAGGAGGATAGATTTATGGA 57.379 33.333 0.00 0.00 0.00 3.41
4577 6801 7.928706 CGTTGAATTCAGTAGGAGGATAGATTT 59.071 37.037 8.41 0.00 0.00 2.17
4579 6803 6.517529 GCGTTGAATTCAGTAGGAGGATAGAT 60.518 42.308 8.41 0.00 0.00 1.98
4582 6806 4.499188 CGCGTTGAATTCAGTAGGAGGATA 60.499 45.833 8.41 0.00 0.00 2.59
4583 6807 3.738281 CGCGTTGAATTCAGTAGGAGGAT 60.738 47.826 8.41 0.00 0.00 3.24
4584 6808 2.416836 CGCGTTGAATTCAGTAGGAGGA 60.417 50.000 8.41 0.00 0.00 3.71
4585 6809 1.927174 CGCGTTGAATTCAGTAGGAGG 59.073 52.381 8.41 0.55 0.00 4.30
4586 6810 2.345641 CACGCGTTGAATTCAGTAGGAG 59.654 50.000 10.22 5.28 0.00 3.69
4587 6811 2.333926 CACGCGTTGAATTCAGTAGGA 58.666 47.619 10.22 0.00 0.00 2.94
4588 6812 1.393539 CCACGCGTTGAATTCAGTAGG 59.606 52.381 10.22 0.00 0.00 3.18
4589 6813 2.066262 ACCACGCGTTGAATTCAGTAG 58.934 47.619 18.13 5.50 0.00 2.57
4591 6815 0.586319 CACCACGCGTTGAATTCAGT 59.414 50.000 18.13 0.02 0.00 3.41
4593 6817 1.281353 GCACCACGCGTTGAATTCA 59.719 52.632 18.13 3.38 0.00 2.57
4594 6818 4.130857 GCACCACGCGTTGAATTC 57.869 55.556 18.13 0.00 0.00 2.17
4603 6827 0.108138 AGAAGATACCAGCACCACGC 60.108 55.000 0.00 0.00 42.91 5.34
4604 6828 2.271800 GAAGAAGATACCAGCACCACG 58.728 52.381 0.00 0.00 0.00 4.94
4605 6829 2.027192 TGGAAGAAGATACCAGCACCAC 60.027 50.000 0.00 0.00 0.00 4.16
4606 6830 2.265367 TGGAAGAAGATACCAGCACCA 58.735 47.619 0.00 0.00 0.00 4.17
4607 6831 3.567478 ATGGAAGAAGATACCAGCACC 57.433 47.619 0.00 0.00 37.12 5.01
4608 6832 5.537300 TCTATGGAAGAAGATACCAGCAC 57.463 43.478 0.00 0.00 37.12 4.40
4609 6833 6.080682 AGATCTATGGAAGAAGATACCAGCA 58.919 40.000 0.00 0.00 37.89 4.41
4610 6834 6.437162 AGAGATCTATGGAAGAAGATACCAGC 59.563 42.308 0.00 0.00 37.89 4.85
4611 6835 7.890127 AGAGAGATCTATGGAAGAAGATACCAG 59.110 40.741 0.00 0.00 37.89 4.00
4612 6836 7.764617 AGAGAGATCTATGGAAGAAGATACCA 58.235 38.462 0.00 0.00 37.89 3.25
4614 6838 7.065803 CCGAGAGAGATCTATGGAAGAAGATAC 59.934 44.444 0.00 0.00 37.89 2.24
4617 6841 5.312895 CCGAGAGAGATCTATGGAAGAAGA 58.687 45.833 0.00 0.00 37.89 2.87
4618 6842 4.082787 GCCGAGAGAGATCTATGGAAGAAG 60.083 50.000 0.00 0.00 37.89 2.85
4619 6843 3.823873 GCCGAGAGAGATCTATGGAAGAA 59.176 47.826 0.00 0.00 37.89 2.52
4620 6844 3.417101 GCCGAGAGAGATCTATGGAAGA 58.583 50.000 0.00 0.00 39.02 2.87
4621 6845 2.491693 GGCCGAGAGAGATCTATGGAAG 59.508 54.545 0.00 0.00 0.00 3.46
4622 6846 2.520069 GGCCGAGAGAGATCTATGGAA 58.480 52.381 0.00 0.00 0.00 3.53
4623 6847 1.272203 GGGCCGAGAGAGATCTATGGA 60.272 57.143 0.00 0.00 0.00 3.41
4624 6848 1.181786 GGGCCGAGAGAGATCTATGG 58.818 60.000 0.00 0.00 0.00 2.74
4625 6849 1.181786 GGGGCCGAGAGAGATCTATG 58.818 60.000 0.00 0.00 0.00 2.23
4626 6850 0.040499 GGGGGCCGAGAGAGATCTAT 59.960 60.000 0.00 0.00 0.00 1.98
4629 6853 2.200092 AGGGGGCCGAGAGAGATC 59.800 66.667 0.00 0.00 0.00 2.75
4632 6856 1.341156 ATTTCAGGGGGCCGAGAGAG 61.341 60.000 0.00 0.00 0.00 3.20
4633 6857 1.306997 ATTTCAGGGGGCCGAGAGA 60.307 57.895 0.00 0.00 0.00 3.10
4634 6858 1.147153 GATTTCAGGGGGCCGAGAG 59.853 63.158 0.00 0.00 0.00 3.20
4635 6859 1.615124 TGATTTCAGGGGGCCGAGA 60.615 57.895 0.00 0.00 0.00 4.04
4636 6860 1.153086 CTGATTTCAGGGGGCCGAG 60.153 63.158 0.00 0.00 40.20 4.63
4638 6862 2.830370 GCTGATTTCAGGGGGCCG 60.830 66.667 9.49 0.00 43.94 6.13
4644 6868 1.750399 CCCACCCGCTGATTTCAGG 60.750 63.158 9.49 0.00 43.94 3.86
4645 6869 1.750399 CCCCACCCGCTGATTTCAG 60.750 63.158 3.13 3.13 46.40 3.02
4646 6870 2.354729 CCCCACCCGCTGATTTCA 59.645 61.111 0.00 0.00 0.00 2.69
4647 6871 3.140814 GCCCCACCCGCTGATTTC 61.141 66.667 0.00 0.00 0.00 2.17
4648 6872 4.759205 GGCCCCACCCGCTGATTT 62.759 66.667 0.00 0.00 0.00 2.17
4660 6884 2.920076 TAAATGATGCACCGGGCCCC 62.920 60.000 18.66 1.60 43.89 5.80
4661 6885 1.040339 TTAAATGATGCACCGGGCCC 61.040 55.000 13.57 13.57 43.89 5.80
4662 6886 1.039856 ATTAAATGATGCACCGGGCC 58.960 50.000 6.32 0.00 43.89 5.80
4663 6887 2.888834 AATTAAATGATGCACCGGGC 57.111 45.000 6.32 7.25 45.13 6.13
4664 6888 5.009854 AGAAAATTAAATGATGCACCGGG 57.990 39.130 6.32 0.00 0.00 5.73
4665 6889 5.894807 AGAGAAAATTAAATGATGCACCGG 58.105 37.500 0.00 0.00 0.00 5.28
4667 6891 6.753744 GGTGAGAGAAAATTAAATGATGCACC 59.246 38.462 0.00 0.00 33.70 5.01
4670 6894 6.976925 CAGGGTGAGAGAAAATTAAATGATGC 59.023 38.462 0.00 0.00 0.00 3.91
4671 6895 8.284945 TCAGGGTGAGAGAAAATTAAATGATG 57.715 34.615 0.00 0.00 0.00 3.07
4672 6896 9.484806 AATCAGGGTGAGAGAAAATTAAATGAT 57.515 29.630 0.00 0.00 0.00 2.45
4673 6897 8.884124 AATCAGGGTGAGAGAAAATTAAATGA 57.116 30.769 0.00 0.00 0.00 2.57
4676 6900 9.753674 ACATAATCAGGGTGAGAGAAAATTAAA 57.246 29.630 0.00 0.00 0.00 1.52
4677 6901 9.177608 CACATAATCAGGGTGAGAGAAAATTAA 57.822 33.333 0.00 0.00 34.52 1.40
4679 6903 7.177878 ACACATAATCAGGGTGAGAGAAAATT 58.822 34.615 0.00 0.00 36.42 1.82
4680 6904 6.725364 ACACATAATCAGGGTGAGAGAAAAT 58.275 36.000 0.00 0.00 36.42 1.82
4681 6905 6.126863 ACACATAATCAGGGTGAGAGAAAA 57.873 37.500 0.00 0.00 36.42 2.29
4682 6906 5.762179 ACACATAATCAGGGTGAGAGAAA 57.238 39.130 0.00 0.00 36.42 2.52
4683 6907 6.867519 TTACACATAATCAGGGTGAGAGAA 57.132 37.500 0.00 0.00 36.42 2.87
4684 6908 6.867519 TTTACACATAATCAGGGTGAGAGA 57.132 37.500 0.00 0.00 36.42 3.10
4685 6909 6.540189 CCTTTTACACATAATCAGGGTGAGAG 59.460 42.308 0.00 0.00 36.42 3.20
4686 6910 6.214615 TCCTTTTACACATAATCAGGGTGAGA 59.785 38.462 0.00 0.00 36.42 3.27
4687 6911 6.414732 TCCTTTTACACATAATCAGGGTGAG 58.585 40.000 0.00 0.00 36.42 3.51
4688 6912 6.381498 TCCTTTTACACATAATCAGGGTGA 57.619 37.500 0.00 0.00 36.42 4.02
4689 6913 7.176690 AGTTTCCTTTTACACATAATCAGGGTG 59.823 37.037 0.00 0.00 38.47 4.61
4690 6914 7.238710 AGTTTCCTTTTACACATAATCAGGGT 58.761 34.615 0.00 0.00 0.00 4.34
4691 6915 7.703058 AGTTTCCTTTTACACATAATCAGGG 57.297 36.000 0.00 0.00 0.00 4.45
4693 6917 9.612620 GTCAAGTTTCCTTTTACACATAATCAG 57.387 33.333 0.00 0.00 0.00 2.90
4694 6918 9.349713 AGTCAAGTTTCCTTTTACACATAATCA 57.650 29.630 0.00 0.00 0.00 2.57
4697 6921 9.403583 AGAAGTCAAGTTTCCTTTTACACATAA 57.596 29.630 0.00 0.00 0.00 1.90
4699 6923 7.556275 TCAGAAGTCAAGTTTCCTTTTACACAT 59.444 33.333 0.00 0.00 0.00 3.21
4700 6924 6.882140 TCAGAAGTCAAGTTTCCTTTTACACA 59.118 34.615 0.00 0.00 0.00 3.72
4701 6925 7.316544 TCAGAAGTCAAGTTTCCTTTTACAC 57.683 36.000 0.00 0.00 0.00 2.90
4702 6926 7.931578 TTCAGAAGTCAAGTTTCCTTTTACA 57.068 32.000 0.00 0.00 0.00 2.41
4703 6927 9.803315 AAATTCAGAAGTCAAGTTTCCTTTTAC 57.197 29.630 0.00 0.00 0.00 2.01
4775 7733 9.941664 GTCATATTATCACAAGAACAATTGAGG 57.058 33.333 13.59 0.00 34.20 3.86
4875 7862 7.978925 TCATTTAAAGGGGCAAAAGGAAAATA 58.021 30.769 0.00 0.00 0.00 1.40
4882 7869 8.314021 ACTAAAGATCATTTAAAGGGGCAAAAG 58.686 33.333 0.00 0.00 0.00 2.27
4915 7902 9.261180 GTGCTGTGAGATAATGCTAACTAATAA 57.739 33.333 0.00 0.00 0.00 1.40
4922 7909 7.331026 ACTTAAGTGCTGTGAGATAATGCTAA 58.669 34.615 7.48 0.00 0.00 3.09
4925 7912 6.201806 CCTACTTAAGTGCTGTGAGATAATGC 59.798 42.308 18.56 0.00 0.00 3.56
4999 7986 5.242393 AGCAAATAATTCTCCATTCCCATCG 59.758 40.000 0.00 0.00 0.00 3.84
5130 8117 1.882623 CTGCCCCAAGAAAACAGAGAC 59.117 52.381 0.00 0.00 0.00 3.36
5225 8212 3.557595 GTGACTCAGGAGATAAATTGGCG 59.442 47.826 2.79 0.00 0.00 5.69
5300 8287 8.903570 TGCATACAAAAACTAAATGTTATCGG 57.096 30.769 0.00 0.00 38.03 4.18
5388 8378 7.778382 GGTTACCACTGGTATCCATTATTCTTT 59.222 37.037 23.02 0.00 43.72 2.52
5400 8390 8.792830 TGATAATCTTAGGTTACCACTGGTAT 57.207 34.615 8.83 0.00 38.05 2.73
5548 8538 1.879380 CCAAGATTTCAGTTGCCGACA 59.121 47.619 0.00 0.00 0.00 4.35
5602 8592 3.648716 TGCAGCTGGAAACTATGCA 57.351 47.368 17.12 0.97 44.10 3.96
5756 8747 2.746472 GCAGGAATAGAACTCGGGCATT 60.746 50.000 0.00 0.00 0.00 3.56
5766 8757 5.945784 AGTAAAAGTGCATGCAGGAATAGAA 59.054 36.000 23.41 0.00 0.00 2.10
5795 8786 3.629142 CGGAGGATAAAAAGGACACCT 57.371 47.619 0.00 0.00 33.87 4.00
6254 9306 1.114627 AGTCATGCCGATCTGCACTA 58.885 50.000 14.43 2.62 45.48 2.74
6317 9369 7.663827 TCTAATGGTATATGTGGTTTACCTCG 58.336 38.462 0.00 0.00 37.00 4.63
6331 9383 8.513139 TCTCTCTCTTCCTCTCTAATGGTATA 57.487 38.462 0.00 0.00 0.00 1.47
6348 9400 0.998945 CCCTCCCTCCCTCTCTCTCT 60.999 65.000 0.00 0.00 0.00 3.10
6349 9401 0.996762 TCCCTCCCTCCCTCTCTCTC 60.997 65.000 0.00 0.00 0.00 3.20
6350 9402 0.998945 CTCCCTCCCTCCCTCTCTCT 60.999 65.000 0.00 0.00 0.00 3.10
6351 9403 1.293683 ACTCCCTCCCTCCCTCTCTC 61.294 65.000 0.00 0.00 0.00 3.20
6352 9404 0.048117 TACTCCCTCCCTCCCTCTCT 59.952 60.000 0.00 0.00 0.00 3.10
6353 9405 1.076513 GATACTCCCTCCCTCCCTCTC 59.923 61.905 0.00 0.00 0.00 3.20
6354 9406 1.163408 GATACTCCCTCCCTCCCTCT 58.837 60.000 0.00 0.00 0.00 3.69
6355 9407 0.251430 CGATACTCCCTCCCTCCCTC 60.251 65.000 0.00 0.00 0.00 4.30
6356 9408 1.000041 ACGATACTCCCTCCCTCCCT 61.000 60.000 0.00 0.00 0.00 4.20
6357 9409 0.105607 AACGATACTCCCTCCCTCCC 60.106 60.000 0.00 0.00 0.00 4.30
6358 9410 1.790818 AAACGATACTCCCTCCCTCC 58.209 55.000 0.00 0.00 0.00 4.30
6359 9411 2.764572 TCAAAACGATACTCCCTCCCTC 59.235 50.000 0.00 0.00 0.00 4.30
6360 9412 2.829023 TCAAAACGATACTCCCTCCCT 58.171 47.619 0.00 0.00 0.00 4.20
6361 9413 3.268330 GTTCAAAACGATACTCCCTCCC 58.732 50.000 0.00 0.00 0.00 4.30
6362 9414 3.268330 GGTTCAAAACGATACTCCCTCC 58.732 50.000 0.00 0.00 0.00 4.30
6363 9415 3.933332 CTGGTTCAAAACGATACTCCCTC 59.067 47.826 0.00 0.00 0.00 4.30
6364 9416 3.326880 ACTGGTTCAAAACGATACTCCCT 59.673 43.478 0.00 0.00 0.00 4.20
6365 9417 3.671716 ACTGGTTCAAAACGATACTCCC 58.328 45.455 0.00 0.00 0.00 4.30
6366 9418 4.868734 CCTACTGGTTCAAAACGATACTCC 59.131 45.833 0.00 0.00 0.00 3.85
6383 9459 3.535561 CTTTCTACATGTGCCCCTACTG 58.464 50.000 9.11 0.00 0.00 2.74
6470 9628 0.392706 AACATCAGTGACTGTCGCCA 59.607 50.000 17.11 5.48 32.61 5.69
6475 9633 4.578928 GGTTGGTTAAACATCAGTGACTGT 59.421 41.667 12.93 0.00 40.86 3.55
6673 9831 3.464111 GCCATGGCAATAAGCTCAATT 57.536 42.857 32.08 0.00 44.79 2.32
6718 9876 5.636837 TGCTCAAGTTTGACAAAGTTGTAC 58.363 37.500 32.55 27.23 46.75 2.90
6907 10065 6.177610 AGTTGAGAAAGGTGTCACTTTACAA 58.822 36.000 0.11 6.00 40.55 2.41
6933 10091 4.086457 TCCCTCCAATTTTTCAAGTAGCC 58.914 43.478 0.00 0.00 0.00 3.93
7010 10168 3.634568 TGCAGGTAAATGGAAAACACG 57.365 42.857 0.00 0.00 0.00 4.49
7060 10218 2.196925 AACCAAACAATCGCCCGCA 61.197 52.632 0.00 0.00 0.00 5.69
7066 10224 1.036707 ACCCACCAACCAAACAATCG 58.963 50.000 0.00 0.00 0.00 3.34
7177 10335 4.142182 GCAGCAGAAAAATTGGCAGGTATA 60.142 41.667 0.00 0.00 0.00 1.47
7240 10398 8.650143 ATCAATAACTAATCCCACAAAACAGT 57.350 30.769 0.00 0.00 0.00 3.55
7326 10498 9.822727 TCCATATGTACTCTGTATTGGAATCTA 57.177 33.333 1.24 0.00 0.00 1.98
7342 10514 6.925610 TCACTCATTTTGCTCCATATGTAC 57.074 37.500 1.24 0.00 0.00 2.90
7349 10521 5.069318 TGTACATTCACTCATTTTGCTCCA 58.931 37.500 0.00 0.00 0.00 3.86
7373 10545 8.623903 ACGGATGTATACAGACGTATTTTAGAA 58.376 33.333 26.41 0.00 39.29 2.10
7445 10619 5.454897 GGACACAAGAAATATCCTACTCCCC 60.455 48.000 0.00 0.00 0.00 4.81
7556 10731 9.598517 AGAGAAGATAAAACAGAGAGCATAAAG 57.401 33.333 0.00 0.00 0.00 1.85
7592 12856 4.413495 TGGTAATTAGTTTCGCTGCAAC 57.587 40.909 0.00 0.00 0.00 4.17
7613 12877 4.529897 TGCCTCATCTGCATACAAGAAAT 58.470 39.130 0.00 0.00 32.85 2.17
7662 12926 7.015098 TGGTCCTTTATTTATTGGCACCATATG 59.985 37.037 0.00 0.00 30.60 1.78
7681 12945 3.432046 CCAAAATGTTTGCAGTGGTCCTT 60.432 43.478 0.00 0.00 0.00 3.36
7724 12988 7.099764 GTGACATGACAAATTCTCTCTCCTAA 58.900 38.462 0.00 0.00 0.00 2.69
7767 13031 1.843368 AGGCACATCCAACCATTCAG 58.157 50.000 0.00 0.00 37.29 3.02
7882 13146 5.123979 ACAGAAACTGACAGAAACTGGAAAC 59.876 40.000 10.08 0.00 33.65 2.78
7922 13186 9.490379 GTTCCAAACAGAGAAATAACTAAGAGA 57.510 33.333 0.00 0.00 0.00 3.10
7923 13187 8.436200 CGTTCCAAACAGAGAAATAACTAAGAG 58.564 37.037 0.00 0.00 0.00 2.85
7924 13188 7.095355 GCGTTCCAAACAGAGAAATAACTAAGA 60.095 37.037 0.00 0.00 0.00 2.10
7925 13189 7.015877 GCGTTCCAAACAGAGAAATAACTAAG 58.984 38.462 0.00 0.00 0.00 2.18
7926 13190 6.072893 GGCGTTCCAAACAGAGAAATAACTAA 60.073 38.462 0.00 0.00 0.00 2.24
7927 13191 5.410439 GGCGTTCCAAACAGAGAAATAACTA 59.590 40.000 0.00 0.00 0.00 2.24
7928 13192 4.215613 GGCGTTCCAAACAGAGAAATAACT 59.784 41.667 0.00 0.00 0.00 2.24
7929 13193 4.473199 GGCGTTCCAAACAGAGAAATAAC 58.527 43.478 0.00 0.00 0.00 1.89
7930 13194 3.504520 GGGCGTTCCAAACAGAGAAATAA 59.495 43.478 0.00 0.00 35.00 1.40
7931 13195 3.078837 GGGCGTTCCAAACAGAGAAATA 58.921 45.455 0.00 0.00 35.00 1.40
7932 13196 1.886542 GGGCGTTCCAAACAGAGAAAT 59.113 47.619 0.00 0.00 35.00 2.17
7933 13197 1.314730 GGGCGTTCCAAACAGAGAAA 58.685 50.000 0.00 0.00 35.00 2.52
7934 13198 0.536460 GGGGCGTTCCAAACAGAGAA 60.536 55.000 0.00 0.00 37.22 2.87
7935 13199 1.072505 GGGGCGTTCCAAACAGAGA 59.927 57.895 0.00 0.00 37.22 3.10
7936 13200 1.971695 GGGGGCGTTCCAAACAGAG 60.972 63.158 0.00 0.00 37.22 3.35
7937 13201 2.114411 GGGGGCGTTCCAAACAGA 59.886 61.111 0.00 0.00 37.22 3.41
8087 13352 7.231519 AGGGAAGATTCGAAAAAGAAAGACAAT 59.768 33.333 0.00 0.00 33.43 2.71
8162 13428 1.070758 ACACTGCTCGAATCAACCAGT 59.929 47.619 0.00 0.00 37.24 4.00
8393 13670 4.994471 TGTGCACCAGCCAGCGAG 62.994 66.667 15.69 0.00 41.13 5.03
8405 13682 2.739609 CGGACATGCTCTCTAATGTGCA 60.740 50.000 7.83 0.00 43.12 4.57
8497 13774 3.427670 CCTTTTGGCAACCGTCGT 58.572 55.556 0.00 0.00 0.00 4.34
8520 13797 1.885388 CCAAGCGTCACAACCACGA 60.885 57.895 0.00 0.00 39.75 4.35
8587 13865 0.036952 CTTGTCCACGAGCTCCACAT 60.037 55.000 8.47 0.00 0.00 3.21
8602 13880 0.811616 GGATCGCGCCTTGATCTTGT 60.812 55.000 18.98 0.00 41.56 3.16
8640 13918 2.100631 GTCGCCAGAATGTGACCGG 61.101 63.158 0.00 0.00 34.63 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.