Multiple sequence alignment - TraesCS1D01G156800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G156800 chr1D 100.000 3838 0 0 1 3838 220928457 220924620 0.000000e+00 7088.0
1 TraesCS1D01G156800 chr1B 96.047 2783 92 14 821 3589 317365305 317362527 0.000000e+00 4514.0
2 TraesCS1D01G156800 chr1B 92.734 578 23 9 222 780 317365877 317365300 0.000000e+00 817.0
3 TraesCS1D01G156800 chr1B 95.364 151 7 0 3619 3769 317362531 317362381 1.380000e-59 241.0
4 TraesCS1D01G156800 chr1A 94.715 1911 68 14 228 2114 285356604 285354703 0.000000e+00 2939.0
5 TraesCS1D01G156800 chr1A 95.450 901 30 4 2150 3049 285354703 285353813 0.000000e+00 1426.0
6 TraesCS1D01G156800 chr1A 94.221 398 21 2 3046 3441 285353733 285353336 1.180000e-169 606.0
7 TraesCS1D01G156800 chr1A 92.562 242 13 2 3533 3769 285340788 285340547 3.670000e-90 342.0
8 TraesCS1D01G156800 chr1A 96.552 58 2 0 3480 3537 285349557 285349500 3.160000e-16 97.1
9 TraesCS1D01G156800 chr1A 98.039 51 1 0 3438 3488 285352083 285352033 5.280000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G156800 chr1D 220924620 220928457 3837 True 7088.000000 7088 100.0000 1 3838 1 chr1D.!!$R1 3837
1 TraesCS1D01G156800 chr1B 317362381 317365877 3496 True 1857.333333 4514 94.7150 222 3769 3 chr1B.!!$R1 3547
2 TraesCS1D01G156800 chr1A 285349500 285356604 7104 True 1031.580000 2939 95.7954 228 3537 5 chr1A.!!$R2 3309

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
625 652 0.119358 AGCTAGGAAGAAGGTGGGGT 59.881 55.000 0.0 0.0 0.0 4.95 F
704 732 0.464554 CCTTGAGAGCGGGGGAAATC 60.465 60.000 0.0 0.0 0.0 2.17 F
796 824 0.536460 CTTGGGGTTGCGGTGTAGTT 60.536 55.000 0.0 0.0 0.0 2.24 F
1801 1833 1.737793 CGCTGGTTCCTGTTCATTACC 59.262 52.381 0.0 0.0 0.0 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1861 1893 0.385751 TGTACTAGATCTGCCTGCGC 59.614 55.000 5.18 0.0 0.00 6.09 R
2682 2716 1.575419 ACCACAGCCTCGGGTTTATA 58.425 50.000 0.00 0.0 0.00 0.98 R
2747 2781 1.416030 TGTGCTACAGTCTTCTGCCAA 59.584 47.619 0.00 0.0 44.77 4.52 R
3614 7481 0.029300 GCTGCAACGCTGTCTTTTCA 59.971 50.000 0.00 0.0 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 5.957842 AAATGGCATCGTGAAAGTTTAGA 57.042 34.783 0.00 0.00 0.00 2.10
60 61 5.957842 AATGGCATCGTGAAAGTTTAGAA 57.042 34.783 0.00 0.00 0.00 2.10
61 62 4.742438 TGGCATCGTGAAAGTTTAGAAC 57.258 40.909 0.00 0.00 0.00 3.01
62 63 3.500680 TGGCATCGTGAAAGTTTAGAACC 59.499 43.478 0.00 0.00 0.00 3.62
63 64 3.500680 GGCATCGTGAAAGTTTAGAACCA 59.499 43.478 0.00 0.00 0.00 3.67
64 65 4.464112 GCATCGTGAAAGTTTAGAACCAC 58.536 43.478 0.00 0.00 0.00 4.16
65 66 4.213482 GCATCGTGAAAGTTTAGAACCACT 59.787 41.667 0.00 0.00 0.00 4.00
66 67 5.679906 CATCGTGAAAGTTTAGAACCACTG 58.320 41.667 0.00 0.00 0.00 3.66
67 68 5.013568 TCGTGAAAGTTTAGAACCACTGA 57.986 39.130 0.00 0.00 0.00 3.41
68 69 5.607477 TCGTGAAAGTTTAGAACCACTGAT 58.393 37.500 0.00 0.00 0.00 2.90
69 70 6.053005 TCGTGAAAGTTTAGAACCACTGATT 58.947 36.000 0.00 0.00 0.00 2.57
70 71 7.211573 TCGTGAAAGTTTAGAACCACTGATTA 58.788 34.615 0.00 0.00 0.00 1.75
71 72 7.876068 TCGTGAAAGTTTAGAACCACTGATTAT 59.124 33.333 0.00 0.00 0.00 1.28
72 73 8.504005 CGTGAAAGTTTAGAACCACTGATTATT 58.496 33.333 0.00 0.00 0.00 1.40
75 76 9.626045 GAAAGTTTAGAACCACTGATTATTTGG 57.374 33.333 0.00 0.00 36.39 3.28
76 77 8.934023 AAGTTTAGAACCACTGATTATTTGGA 57.066 30.769 0.00 0.00 34.24 3.53
77 78 8.336801 AGTTTAGAACCACTGATTATTTGGAC 57.663 34.615 0.00 0.00 34.24 4.02
78 79 8.164070 AGTTTAGAACCACTGATTATTTGGACT 58.836 33.333 0.00 0.00 34.24 3.85
79 80 7.921786 TTAGAACCACTGATTATTTGGACTG 57.078 36.000 0.00 0.00 34.24 3.51
80 81 5.880901 AGAACCACTGATTATTTGGACTGT 58.119 37.500 0.00 0.00 34.24 3.55
81 82 7.016153 AGAACCACTGATTATTTGGACTGTA 57.984 36.000 0.00 0.00 34.24 2.74
82 83 6.879458 AGAACCACTGATTATTTGGACTGTAC 59.121 38.462 0.00 0.00 34.24 2.90
83 84 6.121776 ACCACTGATTATTTGGACTGTACA 57.878 37.500 0.00 0.00 34.24 2.90
84 85 6.539173 ACCACTGATTATTTGGACTGTACAA 58.461 36.000 0.16 0.16 34.24 2.41
85 86 7.001674 ACCACTGATTATTTGGACTGTACAAA 58.998 34.615 19.69 19.69 41.50 2.83
86 87 7.669722 ACCACTGATTATTTGGACTGTACAAAT 59.330 33.333 28.43 28.43 46.76 2.32
87 88 9.173021 CCACTGATTATTTGGACTGTACAAATA 57.827 33.333 26.62 26.62 44.27 1.40
165 166 4.846779 TTTTGGCAGGTGAGTTCAATAC 57.153 40.909 0.00 0.00 0.00 1.89
166 167 3.788227 TTGGCAGGTGAGTTCAATACT 57.212 42.857 0.00 0.00 40.71 2.12
167 168 3.788227 TGGCAGGTGAGTTCAATACTT 57.212 42.857 0.00 0.00 37.17 2.24
168 169 4.098914 TGGCAGGTGAGTTCAATACTTT 57.901 40.909 0.00 0.00 37.17 2.66
169 170 4.469657 TGGCAGGTGAGTTCAATACTTTT 58.530 39.130 0.00 0.00 37.17 2.27
170 171 4.892934 TGGCAGGTGAGTTCAATACTTTTT 59.107 37.500 0.00 0.00 37.17 1.94
213 214 9.589111 AAATGTTGAATTACAAAAAGGTAACGT 57.411 25.926 0.00 0.00 40.55 3.99
214 215 9.589111 AATGTTGAATTACAAAAAGGTAACGTT 57.411 25.926 5.88 5.88 40.55 3.99
216 217 9.719279 TGTTGAATTACAAAAAGGTAACGTTAG 57.281 29.630 8.60 0.00 40.55 2.34
217 218 9.934190 GTTGAATTACAAAAAGGTAACGTTAGA 57.066 29.630 8.60 0.00 40.55 2.10
273 277 9.197306 GGGTAATGTAGAAATTTTGAACCCTAT 57.803 33.333 12.09 0.00 39.79 2.57
298 315 4.897025 AAAACAAAACCAATACGGACGA 57.103 36.364 0.00 0.00 38.63 4.20
334 351 1.672363 GGGCCGTTTTAATTACTCCGG 59.328 52.381 0.00 0.00 38.45 5.14
503 520 1.577328 CTACCAACCACTGCGGCAAG 61.577 60.000 3.44 0.00 39.03 4.01
625 652 0.119358 AGCTAGGAAGAAGGTGGGGT 59.881 55.000 0.00 0.00 0.00 4.95
704 732 0.464554 CCTTGAGAGCGGGGGAAATC 60.465 60.000 0.00 0.00 0.00 2.17
729 757 2.224793 GCTTCTTGGGTTCTAGGGTTGT 60.225 50.000 0.00 0.00 0.00 3.32
796 824 0.536460 CTTGGGGTTGCGGTGTAGTT 60.536 55.000 0.00 0.00 0.00 2.24
906 936 1.914700 GTTTCAGATCGTCTCGCTCAC 59.085 52.381 0.00 0.00 0.00 3.51
1419 1450 4.339872 AACTGATGATGAGATGGAGCTC 57.660 45.455 4.71 4.71 35.46 4.09
1482 1513 2.550180 AGAAAAGACCAGAAGAAAGCGC 59.450 45.455 0.00 0.00 0.00 5.92
1618 1649 3.882888 GCCGGATAATGTTGGATCAGAAA 59.117 43.478 5.05 0.00 0.00 2.52
1757 1788 2.554032 GGTTTGACACATCTTCTGGTGG 59.446 50.000 0.00 0.00 39.31 4.61
1801 1833 1.737793 CGCTGGTTCCTGTTCATTACC 59.262 52.381 0.00 0.00 0.00 2.85
2116 2149 7.634671 TGAAGACATGATTAAGCATGATGTT 57.365 32.000 33.88 23.43 46.64 2.71
2169 2202 9.471084 GAAGCTTAATAGGAGACTTATTCTGAC 57.529 37.037 0.00 0.00 43.67 3.51
2217 2250 5.643379 TTGAGGTCCTAATTTCATTGTGC 57.357 39.130 0.00 0.00 0.00 4.57
2269 2303 4.262592 CCCTTTTTACATTTTCTGGCTGCT 60.263 41.667 0.00 0.00 0.00 4.24
2314 2348 7.724305 TCGAAGTTTTGCTTTGAGTAACTAT 57.276 32.000 0.00 0.00 41.43 2.12
2315 2349 8.821147 TCGAAGTTTTGCTTTGAGTAACTATA 57.179 30.769 0.00 0.00 41.43 1.31
2397 2431 5.968528 AGAGAAGCTACAAGATATACGGG 57.031 43.478 0.00 0.00 0.00 5.28
2442 2476 3.319198 GTCCTCCACGGCCTCCAA 61.319 66.667 0.00 0.00 0.00 3.53
2473 2507 3.726607 CTGCTGATACAGGAGGATCAAC 58.273 50.000 11.42 0.00 44.36 3.18
2682 2716 2.240667 AGTGAACCTGCAGCCTATGAAT 59.759 45.455 8.66 0.00 0.00 2.57
2770 2804 1.462670 GCAGAAGACTGTAGCACAAGC 59.537 52.381 0.00 0.00 45.04 4.01
2798 2832 1.202359 GCACCTGTGGCGAAAAAGAAA 60.202 47.619 0.00 0.00 0.00 2.52
3016 3051 8.575565 AATAAGTCGCTTTTCTTTTCCTTTTC 57.424 30.769 0.00 0.00 0.00 2.29
3167 3288 4.729868 AGAACCACAGGTTTAGCTTTCAT 58.270 39.130 2.55 0.00 46.95 2.57
3231 3353 6.295719 TCTTTATAGTGGAAGTCCCTCAAC 57.704 41.667 0.00 0.00 35.38 3.18
3358 3480 7.521261 GCATTTGTTTTCTCTAGAGTGAGCTTT 60.521 37.037 19.21 0.00 34.29 3.51
3475 4853 3.391296 TCAAGTGTTTAGCTCCTTGGACT 59.609 43.478 0.00 0.00 35.98 3.85
3519 7381 7.040548 TGTTGCATTCTTGAAATCAGTGTGATA 60.041 33.333 0.00 0.00 35.76 2.15
3525 7387 7.425577 TCTTGAAATCAGTGTGATACTTGTG 57.574 36.000 0.00 0.00 35.76 3.33
3540 7402 3.884895 ACTTGTGGATGTGTTGTCAAGA 58.115 40.909 9.21 0.00 36.70 3.02
3586 7453 5.268118 TCATGCTACTCTTATCACCACAG 57.732 43.478 0.00 0.00 0.00 3.66
3587 7454 4.956075 TCATGCTACTCTTATCACCACAGA 59.044 41.667 0.00 0.00 0.00 3.41
3588 7455 4.720649 TGCTACTCTTATCACCACAGAC 57.279 45.455 0.00 0.00 0.00 3.51
3589 7456 3.447586 TGCTACTCTTATCACCACAGACC 59.552 47.826 0.00 0.00 0.00 3.85
3590 7457 3.181474 GCTACTCTTATCACCACAGACCC 60.181 52.174 0.00 0.00 0.00 4.46
3591 7458 1.825474 ACTCTTATCACCACAGACCCG 59.175 52.381 0.00 0.00 0.00 5.28
3592 7459 1.137086 CTCTTATCACCACAGACCCGG 59.863 57.143 0.00 0.00 0.00 5.73
3593 7460 1.191535 CTTATCACCACAGACCCGGA 58.808 55.000 0.73 0.00 0.00 5.14
3594 7461 1.553248 CTTATCACCACAGACCCGGAA 59.447 52.381 0.73 0.00 0.00 4.30
3595 7462 0.899720 TATCACCACAGACCCGGAAC 59.100 55.000 0.73 0.00 0.00 3.62
3596 7463 1.125093 ATCACCACAGACCCGGAACA 61.125 55.000 0.73 0.00 0.00 3.18
3597 7464 1.147376 CACCACAGACCCGGAACAA 59.853 57.895 0.73 0.00 0.00 2.83
3598 7465 0.464735 CACCACAGACCCGGAACAAA 60.465 55.000 0.73 0.00 0.00 2.83
3599 7466 0.256464 ACCACAGACCCGGAACAAAA 59.744 50.000 0.73 0.00 0.00 2.44
3600 7467 0.951558 CCACAGACCCGGAACAAAAG 59.048 55.000 0.73 0.00 0.00 2.27
3601 7468 1.476110 CCACAGACCCGGAACAAAAGA 60.476 52.381 0.73 0.00 0.00 2.52
3602 7469 2.504367 CACAGACCCGGAACAAAAGAT 58.496 47.619 0.73 0.00 0.00 2.40
3603 7470 3.558321 CCACAGACCCGGAACAAAAGATA 60.558 47.826 0.73 0.00 0.00 1.98
3604 7471 4.069304 CACAGACCCGGAACAAAAGATAA 58.931 43.478 0.73 0.00 0.00 1.75
3605 7472 4.700213 CACAGACCCGGAACAAAAGATAAT 59.300 41.667 0.73 0.00 0.00 1.28
3606 7473 4.700213 ACAGACCCGGAACAAAAGATAATG 59.300 41.667 0.73 0.00 0.00 1.90
3607 7474 3.694566 AGACCCGGAACAAAAGATAATGC 59.305 43.478 0.73 0.00 0.00 3.56
3608 7475 3.694566 GACCCGGAACAAAAGATAATGCT 59.305 43.478 0.73 0.00 0.00 3.79
3609 7476 3.443681 ACCCGGAACAAAAGATAATGCTG 59.556 43.478 0.73 0.00 0.00 4.41
3610 7477 3.438360 CCGGAACAAAAGATAATGCTGC 58.562 45.455 0.00 0.00 0.00 5.25
3611 7478 3.438360 CGGAACAAAAGATAATGCTGCC 58.562 45.455 0.00 0.00 0.00 4.85
3612 7479 3.734902 CGGAACAAAAGATAATGCTGCCC 60.735 47.826 0.00 0.00 0.00 5.36
3613 7480 3.430790 GGAACAAAAGATAATGCTGCCCC 60.431 47.826 0.00 0.00 0.00 5.80
3614 7481 3.105959 ACAAAAGATAATGCTGCCCCT 57.894 42.857 0.00 0.00 0.00 4.79
3615 7482 2.762327 ACAAAAGATAATGCTGCCCCTG 59.238 45.455 0.00 0.00 0.00 4.45
3616 7483 3.025978 CAAAAGATAATGCTGCCCCTGA 58.974 45.455 0.00 0.00 0.00 3.86
3617 7484 3.386932 AAAGATAATGCTGCCCCTGAA 57.613 42.857 0.00 0.00 0.00 3.02
3618 7485 3.386932 AAGATAATGCTGCCCCTGAAA 57.613 42.857 0.00 0.00 0.00 2.69
3626 7493 1.580845 CTGCCCCTGAAAAGACAGCG 61.581 60.000 0.00 0.00 36.67 5.18
3635 7502 1.383456 AAAAGACAGCGTTGCAGCCA 61.383 50.000 0.00 0.00 38.01 4.75
3666 7533 6.072112 TGTTTTGTCATAGCTTTCTGGTTC 57.928 37.500 0.00 0.00 0.00 3.62
3692 7559 1.874345 TTCCTCCTCTCGCAACCGAC 61.874 60.000 0.00 0.00 38.82 4.79
3708 7575 0.776451 CGACTGTCGTGCTGTTGTAC 59.224 55.000 21.30 0.00 34.72 2.90
3712 7579 2.356553 TCGTGCTGTTGTACCGCC 60.357 61.111 0.00 0.00 0.00 6.13
3715 7582 1.740296 GTGCTGTTGTACCGCCGAT 60.740 57.895 0.00 0.00 0.00 4.18
3769 7636 1.416772 GGGCTCCCAGTTCACCTATAC 59.583 57.143 0.00 0.00 35.81 1.47
3770 7637 1.068741 GGCTCCCAGTTCACCTATACG 59.931 57.143 0.00 0.00 0.00 3.06
3771 7638 1.068741 GCTCCCAGTTCACCTATACGG 59.931 57.143 0.00 0.00 39.35 4.02
3772 7639 2.662866 CTCCCAGTTCACCTATACGGA 58.337 52.381 0.00 0.00 36.31 4.69
3773 7640 3.231818 CTCCCAGTTCACCTATACGGAT 58.768 50.000 0.00 0.00 36.31 4.18
3774 7641 4.404640 CTCCCAGTTCACCTATACGGATA 58.595 47.826 0.00 0.00 36.31 2.59
3775 7642 4.404640 TCCCAGTTCACCTATACGGATAG 58.595 47.826 7.77 7.77 35.67 2.08
3787 7654 1.949465 ACGGATAGGAAAATGTCGCC 58.051 50.000 0.00 0.00 0.00 5.54
3788 7655 1.226746 CGGATAGGAAAATGTCGCCC 58.773 55.000 0.00 0.00 0.00 6.13
3789 7656 1.226746 GGATAGGAAAATGTCGCCCG 58.773 55.000 0.00 0.00 0.00 6.13
3790 7657 1.202604 GGATAGGAAAATGTCGCCCGA 60.203 52.381 0.00 0.00 0.00 5.14
3791 7658 1.865340 GATAGGAAAATGTCGCCCGAC 59.135 52.381 13.45 13.45 44.77 4.79
3792 7659 0.899720 TAGGAAAATGTCGCCCGACT 59.100 50.000 19.88 1.50 44.80 4.18
3793 7660 0.036306 AGGAAAATGTCGCCCGACTT 59.964 50.000 19.88 12.05 44.80 3.01
3794 7661 1.276989 AGGAAAATGTCGCCCGACTTA 59.723 47.619 19.88 3.13 44.80 2.24
3795 7662 2.093128 AGGAAAATGTCGCCCGACTTAT 60.093 45.455 19.88 5.29 44.80 1.73
3796 7663 2.681344 GGAAAATGTCGCCCGACTTATT 59.319 45.455 19.88 10.54 44.80 1.40
3797 7664 3.872771 GGAAAATGTCGCCCGACTTATTA 59.127 43.478 19.88 1.74 44.80 0.98
3798 7665 4.333372 GGAAAATGTCGCCCGACTTATTAA 59.667 41.667 19.88 1.06 44.80 1.40
3799 7666 5.479716 AAAATGTCGCCCGACTTATTAAG 57.520 39.130 19.88 1.79 44.80 1.85
3800 7667 2.589798 TGTCGCCCGACTTATTAAGG 57.410 50.000 19.88 0.00 44.80 2.69
3801 7668 2.101783 TGTCGCCCGACTTATTAAGGA 58.898 47.619 19.88 0.00 44.80 3.36
3802 7669 2.159198 TGTCGCCCGACTTATTAAGGAC 60.159 50.000 19.88 5.21 44.80 3.85
3803 7670 2.101783 TCGCCCGACTTATTAAGGACA 58.898 47.619 8.26 0.00 0.00 4.02
3804 7671 2.100252 TCGCCCGACTTATTAAGGACAG 59.900 50.000 8.26 0.00 0.00 3.51
3805 7672 2.159142 CGCCCGACTTATTAAGGACAGT 60.159 50.000 8.26 0.00 0.00 3.55
3806 7673 3.067180 CGCCCGACTTATTAAGGACAGTA 59.933 47.826 8.26 0.00 0.00 2.74
3807 7674 4.261909 CGCCCGACTTATTAAGGACAGTAT 60.262 45.833 8.26 0.00 0.00 2.12
3808 7675 5.048504 CGCCCGACTTATTAAGGACAGTATA 60.049 44.000 8.26 0.00 0.00 1.47
3809 7676 6.515531 CGCCCGACTTATTAAGGACAGTATAA 60.516 42.308 8.26 0.00 0.00 0.98
3810 7677 7.384477 GCCCGACTTATTAAGGACAGTATAAT 58.616 38.462 8.26 0.00 0.00 1.28
3811 7678 7.544915 GCCCGACTTATTAAGGACAGTATAATC 59.455 40.741 8.26 0.00 0.00 1.75
3812 7679 7.754027 CCCGACTTATTAAGGACAGTATAATCG 59.246 40.741 8.26 4.20 0.00 3.34
3813 7680 8.509690 CCGACTTATTAAGGACAGTATAATCGA 58.490 37.037 8.26 0.00 0.00 3.59
3814 7681 9.544314 CGACTTATTAAGGACAGTATAATCGAG 57.456 37.037 8.26 0.00 0.00 4.04
3815 7682 9.344309 GACTTATTAAGGACAGTATAATCGAGC 57.656 37.037 8.26 0.00 0.00 5.03
3816 7683 8.305317 ACTTATTAAGGACAGTATAATCGAGCC 58.695 37.037 8.26 0.00 0.00 4.70
3817 7684 6.919775 ATTAAGGACAGTATAATCGAGCCT 57.080 37.500 0.00 0.00 0.00 4.58
3818 7685 9.524496 TTATTAAGGACAGTATAATCGAGCCTA 57.476 33.333 0.00 0.00 0.00 3.93
3819 7686 7.828508 TTAAGGACAGTATAATCGAGCCTAA 57.171 36.000 0.00 0.00 0.00 2.69
3820 7687 6.919775 AAGGACAGTATAATCGAGCCTAAT 57.080 37.500 0.00 0.00 0.00 1.73
3821 7688 6.518208 AGGACAGTATAATCGAGCCTAATC 57.482 41.667 0.00 0.00 0.00 1.75
3822 7689 5.419471 AGGACAGTATAATCGAGCCTAATCC 59.581 44.000 0.00 0.00 0.00 3.01
3823 7690 5.394333 GGACAGTATAATCGAGCCTAATCCC 60.394 48.000 0.00 0.00 0.00 3.85
3824 7691 5.084519 ACAGTATAATCGAGCCTAATCCCA 58.915 41.667 0.00 0.00 0.00 4.37
3825 7692 5.186021 ACAGTATAATCGAGCCTAATCCCAG 59.814 44.000 0.00 0.00 0.00 4.45
3826 7693 3.618690 ATAATCGAGCCTAATCCCAGC 57.381 47.619 0.00 0.00 0.00 4.85
3827 7694 0.398318 AATCGAGCCTAATCCCAGCC 59.602 55.000 0.00 0.00 0.00 4.85
3828 7695 1.484444 ATCGAGCCTAATCCCAGCCC 61.484 60.000 0.00 0.00 0.00 5.19
3829 7696 2.143419 CGAGCCTAATCCCAGCCCT 61.143 63.158 0.00 0.00 0.00 5.19
3830 7697 1.757949 GAGCCTAATCCCAGCCCTC 59.242 63.158 0.00 0.00 0.00 4.30
3831 7698 0.766288 GAGCCTAATCCCAGCCCTCT 60.766 60.000 0.00 0.00 0.00 3.69
3832 7699 0.766288 AGCCTAATCCCAGCCCTCTC 60.766 60.000 0.00 0.00 0.00 3.20
3833 7700 1.056700 GCCTAATCCCAGCCCTCTCA 61.057 60.000 0.00 0.00 0.00 3.27
3834 7701 0.761802 CCTAATCCCAGCCCTCTCAC 59.238 60.000 0.00 0.00 0.00 3.51
3835 7702 0.390860 CTAATCCCAGCCCTCTCACG 59.609 60.000 0.00 0.00 0.00 4.35
3836 7703 1.686325 TAATCCCAGCCCTCTCACGC 61.686 60.000 0.00 0.00 0.00 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.936759 TCTTTTTGTTTTCCAAAGTTTGTATCT 57.063 25.926 14.36 0.00 43.63 1.98
6 7 9.061435 TGATTCTTTTTGTTTTCCAAAGTTTGT 57.939 25.926 14.36 0.00 43.63 2.83
35 36 6.744112 TCTAAACTTTCACGATGCCATTTTT 58.256 32.000 0.00 0.00 0.00 1.94
36 37 6.325919 TCTAAACTTTCACGATGCCATTTT 57.674 33.333 0.00 0.00 0.00 1.82
37 38 5.957842 TCTAAACTTTCACGATGCCATTT 57.042 34.783 0.00 0.00 0.00 2.32
38 39 5.335661 GGTTCTAAACTTTCACGATGCCATT 60.336 40.000 0.00 0.00 0.00 3.16
39 40 4.156008 GGTTCTAAACTTTCACGATGCCAT 59.844 41.667 0.00 0.00 0.00 4.40
40 41 3.500680 GGTTCTAAACTTTCACGATGCCA 59.499 43.478 0.00 0.00 0.00 4.92
41 42 3.500680 TGGTTCTAAACTTTCACGATGCC 59.499 43.478 0.00 0.00 0.00 4.40
42 43 4.213482 AGTGGTTCTAAACTTTCACGATGC 59.787 41.667 0.00 0.00 0.00 3.91
43 44 5.465390 TCAGTGGTTCTAAACTTTCACGATG 59.535 40.000 0.00 0.00 0.00 3.84
44 45 5.607477 TCAGTGGTTCTAAACTTTCACGAT 58.393 37.500 0.00 0.00 0.00 3.73
45 46 5.013568 TCAGTGGTTCTAAACTTTCACGA 57.986 39.130 0.00 0.00 0.00 4.35
46 47 5.924475 ATCAGTGGTTCTAAACTTTCACG 57.076 39.130 0.00 0.00 0.00 4.35
49 50 9.626045 CCAAATAATCAGTGGTTCTAAACTTTC 57.374 33.333 0.00 0.00 0.00 2.62
50 51 9.362151 TCCAAATAATCAGTGGTTCTAAACTTT 57.638 29.630 0.00 0.00 33.88 2.66
51 52 8.793592 GTCCAAATAATCAGTGGTTCTAAACTT 58.206 33.333 0.00 0.00 33.88 2.66
52 53 8.164070 AGTCCAAATAATCAGTGGTTCTAAACT 58.836 33.333 0.00 0.00 33.88 2.66
53 54 8.237267 CAGTCCAAATAATCAGTGGTTCTAAAC 58.763 37.037 0.00 0.00 33.88 2.01
54 55 7.942341 ACAGTCCAAATAATCAGTGGTTCTAAA 59.058 33.333 0.00 0.00 33.88 1.85
55 56 7.458397 ACAGTCCAAATAATCAGTGGTTCTAA 58.542 34.615 0.00 0.00 33.88 2.10
56 57 7.016153 ACAGTCCAAATAATCAGTGGTTCTA 57.984 36.000 0.00 0.00 33.88 2.10
57 58 5.880901 ACAGTCCAAATAATCAGTGGTTCT 58.119 37.500 0.00 0.00 33.88 3.01
58 59 6.653320 TGTACAGTCCAAATAATCAGTGGTTC 59.347 38.462 0.00 0.00 33.88 3.62
59 60 6.539173 TGTACAGTCCAAATAATCAGTGGTT 58.461 36.000 0.00 0.00 33.88 3.67
60 61 6.121776 TGTACAGTCCAAATAATCAGTGGT 57.878 37.500 0.00 0.00 33.88 4.16
61 62 7.447374 TTTGTACAGTCCAAATAATCAGTGG 57.553 36.000 0.00 0.00 0.00 4.00
143 144 4.892934 AGTATTGAACTCACCTGCCAAAAA 59.107 37.500 0.00 0.00 30.33 1.94
144 145 4.469657 AGTATTGAACTCACCTGCCAAAA 58.530 39.130 0.00 0.00 30.33 2.44
145 146 4.098914 AGTATTGAACTCACCTGCCAAA 57.901 40.909 0.00 0.00 30.33 3.28
146 147 3.788227 AGTATTGAACTCACCTGCCAA 57.212 42.857 0.00 0.00 30.33 4.52
147 148 3.788227 AAGTATTGAACTCACCTGCCA 57.212 42.857 0.00 0.00 37.50 4.92
148 149 5.453567 AAAAAGTATTGAACTCACCTGCC 57.546 39.130 0.00 0.00 37.50 4.85
187 188 9.589111 ACGTTACCTTTTTGTAATTCAACATTT 57.411 25.926 0.00 0.00 35.61 2.32
188 189 9.589111 AACGTTACCTTTTTGTAATTCAACATT 57.411 25.926 0.00 0.00 35.61 2.71
190 191 9.719279 CTAACGTTACCTTTTTGTAATTCAACA 57.281 29.630 3.29 0.00 35.61 3.33
191 192 9.934190 TCTAACGTTACCTTTTTGTAATTCAAC 57.066 29.630 3.29 0.00 35.61 3.18
197 198 9.979578 TCTACATCTAACGTTACCTTTTTGTAA 57.020 29.630 3.29 0.00 0.00 2.41
198 199 9.979578 TTCTACATCTAACGTTACCTTTTTGTA 57.020 29.630 3.29 5.74 0.00 2.41
199 200 8.891671 TTCTACATCTAACGTTACCTTTTTGT 57.108 30.769 3.29 4.94 0.00 2.83
247 248 7.476540 AGGGTTCAAAATTTCTACATTACCC 57.523 36.000 0.00 0.00 41.39 3.69
280 284 3.062042 GTCTCGTCCGTATTGGTTTTGT 58.938 45.455 0.00 0.00 39.52 2.83
281 285 3.061322 TGTCTCGTCCGTATTGGTTTTG 58.939 45.455 0.00 0.00 39.52 2.44
294 311 2.254651 ACGGCTCGTTGTCTCGTC 59.745 61.111 0.00 0.00 36.35 4.20
334 351 4.142160 GGGGTTCATGGATAACTTGAAAGC 60.142 45.833 0.00 0.00 42.63 3.51
625 652 3.716195 CACCGGCATCTGACCCCA 61.716 66.667 0.00 0.00 0.00 4.96
654 682 0.035458 GATCTTTCCGATGGGGCGAT 59.965 55.000 0.00 0.00 34.94 4.58
699 727 1.534729 ACCCAAGAAGCACCGATTTC 58.465 50.000 0.00 0.00 0.00 2.17
704 732 1.676014 CCTAGAACCCAAGAAGCACCG 60.676 57.143 0.00 0.00 0.00 4.94
746 774 7.284919 AGAAAGAAGGCGAAATAAAAGGAAA 57.715 32.000 0.00 0.00 0.00 3.13
796 824 0.882927 CGTCGCCCCTCAAACTTGAA 60.883 55.000 0.00 0.00 36.64 2.69
906 936 6.939551 ATCAAGAAACTGATCGCAATTTTG 57.060 33.333 0.00 0.00 29.80 2.44
1482 1513 2.286294 GGCAGAATAATCAGCACTGTCG 59.714 50.000 0.00 0.00 39.65 4.35
1575 1606 5.691754 CGGCTTTTGTTTCTTGCTATTCTTT 59.308 36.000 0.00 0.00 0.00 2.52
1618 1649 5.227569 TCAGTTGTACCTGATGACAATGT 57.772 39.130 0.00 0.00 37.84 2.71
1757 1788 6.915843 CGTATTTAAGGGGAATTGCATAACAC 59.084 38.462 0.00 0.00 0.00 3.32
1801 1833 6.537660 TGCATAATTCTCAGATGTTCAGTGAG 59.462 38.462 0.00 8.00 39.31 3.51
1861 1893 0.385751 TGTACTAGATCTGCCTGCGC 59.614 55.000 5.18 0.00 0.00 6.09
2116 2149 6.294176 GCTTTGGCAGAGAAGTTAGAAATGAA 60.294 38.462 9.54 0.00 38.54 2.57
2169 2202 6.053650 TCAATGGAGAAGATGTCATTAGCAG 58.946 40.000 0.00 0.00 0.00 4.24
2217 2250 7.883229 AAAGTTGGTAAATTATTTTCTGCCG 57.117 32.000 0.00 0.00 0.00 5.69
2269 2303 2.875296 ACAGGATTGCTGGTTTGCTAA 58.125 42.857 10.12 0.00 0.00 3.09
2397 2431 4.043200 GCGGGCTGTCTTTGTGGC 62.043 66.667 0.00 0.00 0.00 5.01
2473 2507 3.713858 TTGTTGACCAAGTGCTTGATG 57.286 42.857 12.99 0.80 42.93 3.07
2682 2716 1.575419 ACCACAGCCTCGGGTTTATA 58.425 50.000 0.00 0.00 0.00 0.98
2747 2781 1.416030 TGTGCTACAGTCTTCTGCCAA 59.584 47.619 0.00 0.00 44.77 4.52
2798 2832 3.285484 CACCATATCTTTCAGGCTGCTT 58.715 45.455 10.34 0.00 0.00 3.91
2834 2868 3.809832 TCAGCACTTCAACTTTGCTCTAC 59.190 43.478 0.00 0.00 44.87 2.59
3016 3051 2.021457 GACCAACATTATTGTCCCCCG 58.979 52.381 0.00 0.00 34.06 5.73
3081 3200 2.290514 ACAATGACAGCACAGGCAGTAT 60.291 45.455 0.00 0.00 40.14 2.12
3214 3336 1.623811 GCAGTTGAGGGACTTCCACTA 59.376 52.381 0.00 0.00 41.55 2.74
3224 3346 1.970114 CCAGCACTGCAGTTGAGGG 60.970 63.158 18.94 12.68 0.00 4.30
3231 3353 1.227639 GCATCTATCCAGCACTGCAG 58.772 55.000 13.48 13.48 0.00 4.41
3328 3450 3.696548 CTCTAGAGAAAACAAATGCCCCC 59.303 47.826 15.05 0.00 0.00 5.40
3405 3527 9.479549 TGACATGGATATAGCTCTGATGTTATA 57.520 33.333 0.00 0.00 0.00 0.98
3410 3532 7.104290 ACATTGACATGGATATAGCTCTGATG 58.896 38.462 0.00 0.00 34.27 3.07
3519 7381 3.884895 TCTTGACAACACATCCACAAGT 58.115 40.909 0.00 0.00 36.91 3.16
3525 7387 7.706159 TGCAATATTATCTTGACAACACATCC 58.294 34.615 0.00 0.00 0.00 3.51
3586 7453 3.694566 AGCATTATCTTTTGTTCCGGGTC 59.305 43.478 0.00 0.00 0.00 4.46
3587 7454 3.443681 CAGCATTATCTTTTGTTCCGGGT 59.556 43.478 0.00 0.00 0.00 5.28
3588 7455 3.734902 GCAGCATTATCTTTTGTTCCGGG 60.735 47.826 0.00 0.00 0.00 5.73
3589 7456 3.438360 GCAGCATTATCTTTTGTTCCGG 58.562 45.455 0.00 0.00 0.00 5.14
3590 7457 3.438360 GGCAGCATTATCTTTTGTTCCG 58.562 45.455 0.00 0.00 0.00 4.30
3591 7458 3.430790 GGGGCAGCATTATCTTTTGTTCC 60.431 47.826 0.00 0.00 0.00 3.62
3592 7459 3.448660 AGGGGCAGCATTATCTTTTGTTC 59.551 43.478 0.00 0.00 0.00 3.18
3593 7460 3.196254 CAGGGGCAGCATTATCTTTTGTT 59.804 43.478 0.00 0.00 0.00 2.83
3594 7461 2.762327 CAGGGGCAGCATTATCTTTTGT 59.238 45.455 0.00 0.00 0.00 2.83
3595 7462 3.025978 TCAGGGGCAGCATTATCTTTTG 58.974 45.455 0.00 0.00 0.00 2.44
3596 7463 3.386932 TCAGGGGCAGCATTATCTTTT 57.613 42.857 0.00 0.00 0.00 2.27
3597 7464 3.386932 TTCAGGGGCAGCATTATCTTT 57.613 42.857 0.00 0.00 0.00 2.52
3598 7465 3.386932 TTTCAGGGGCAGCATTATCTT 57.613 42.857 0.00 0.00 0.00 2.40
3599 7466 3.053395 TCTTTTCAGGGGCAGCATTATCT 60.053 43.478 0.00 0.00 0.00 1.98
3600 7467 3.067320 GTCTTTTCAGGGGCAGCATTATC 59.933 47.826 0.00 0.00 0.00 1.75
3601 7468 3.026694 GTCTTTTCAGGGGCAGCATTAT 58.973 45.455 0.00 0.00 0.00 1.28
3602 7469 2.224992 TGTCTTTTCAGGGGCAGCATTA 60.225 45.455 0.00 0.00 0.00 1.90
3603 7470 1.260544 GTCTTTTCAGGGGCAGCATT 58.739 50.000 0.00 0.00 0.00 3.56
3604 7471 0.112995 TGTCTTTTCAGGGGCAGCAT 59.887 50.000 0.00 0.00 0.00 3.79
3605 7472 0.538057 CTGTCTTTTCAGGGGCAGCA 60.538 55.000 0.00 0.00 0.00 4.41
3606 7473 1.871126 GCTGTCTTTTCAGGGGCAGC 61.871 60.000 3.87 3.87 41.65 5.25
3607 7474 1.580845 CGCTGTCTTTTCAGGGGCAG 61.581 60.000 0.00 0.00 42.20 4.85
3608 7475 1.600636 CGCTGTCTTTTCAGGGGCA 60.601 57.895 0.00 0.00 42.20 5.36
3609 7476 3.267974 CGCTGTCTTTTCAGGGGC 58.732 61.111 0.00 0.00 42.20 5.80
3612 7479 0.662619 TGCAACGCTGTCTTTTCAGG 59.337 50.000 0.00 0.00 36.12 3.86
3613 7480 1.923316 GCTGCAACGCTGTCTTTTCAG 60.923 52.381 0.00 0.00 38.35 3.02
3614 7481 0.029300 GCTGCAACGCTGTCTTTTCA 59.971 50.000 0.00 0.00 0.00 2.69
3615 7482 0.661483 GGCTGCAACGCTGTCTTTTC 60.661 55.000 0.50 0.00 0.00 2.29
3616 7483 1.360192 GGCTGCAACGCTGTCTTTT 59.640 52.632 0.50 0.00 0.00 2.27
3617 7484 1.174712 ATGGCTGCAACGCTGTCTTT 61.175 50.000 0.50 0.00 33.40 2.52
3618 7485 1.174712 AATGGCTGCAACGCTGTCTT 61.175 50.000 0.50 0.00 33.40 3.01
3626 7493 0.604578 ACATGACCAATGGCTGCAAC 59.395 50.000 0.00 0.00 40.94 4.17
3635 7502 6.594788 AAGCTATGACAAAACATGACCAAT 57.405 33.333 0.00 0.00 0.00 3.16
3666 7533 0.103937 GCGAGAGGAGGAAGATGGTG 59.896 60.000 0.00 0.00 0.00 4.17
3692 7559 1.886861 GCGGTACAACAGCACGACAG 61.887 60.000 0.00 0.00 39.14 3.51
3708 7575 2.359354 TGGTGGTTTCATCGGCGG 60.359 61.111 7.21 0.00 0.00 6.13
3712 7579 0.874390 CAGGTGTGGTGGTTTCATCG 59.126 55.000 0.00 0.00 0.00 3.84
3715 7582 0.916086 ACTCAGGTGTGGTGGTTTCA 59.084 50.000 0.00 0.00 0.00 2.69
3769 7636 1.226746 GGGCGACATTTTCCTATCCG 58.773 55.000 0.00 0.00 0.00 4.18
3770 7637 1.202604 TCGGGCGACATTTTCCTATCC 60.203 52.381 0.00 0.00 0.00 2.59
3771 7638 1.865340 GTCGGGCGACATTTTCCTATC 59.135 52.381 0.00 0.00 44.02 2.08
3772 7639 1.485066 AGTCGGGCGACATTTTCCTAT 59.515 47.619 0.00 0.00 46.76 2.57
3773 7640 0.899720 AGTCGGGCGACATTTTCCTA 59.100 50.000 0.00 0.00 46.76 2.94
3774 7641 0.036306 AAGTCGGGCGACATTTTCCT 59.964 50.000 0.00 0.00 46.76 3.36
3775 7642 1.729284 TAAGTCGGGCGACATTTTCC 58.271 50.000 0.00 0.00 46.76 3.13
3776 7643 5.473796 TTAATAAGTCGGGCGACATTTTC 57.526 39.130 0.00 0.00 46.76 2.29
3777 7644 4.334481 CCTTAATAAGTCGGGCGACATTTT 59.666 41.667 0.00 0.00 46.76 1.82
3778 7645 3.875134 CCTTAATAAGTCGGGCGACATTT 59.125 43.478 0.00 0.00 46.76 2.32
3779 7646 3.133362 TCCTTAATAAGTCGGGCGACATT 59.867 43.478 0.00 0.00 46.76 2.71
3780 7647 2.696707 TCCTTAATAAGTCGGGCGACAT 59.303 45.455 0.00 0.00 46.76 3.06
3781 7648 2.101783 TCCTTAATAAGTCGGGCGACA 58.898 47.619 0.00 0.00 46.76 4.35
3782 7649 2.159198 TGTCCTTAATAAGTCGGGCGAC 60.159 50.000 0.00 0.00 44.86 5.19
3783 7650 2.100252 CTGTCCTTAATAAGTCGGGCGA 59.900 50.000 0.00 0.00 0.00 5.54
3784 7651 2.159142 ACTGTCCTTAATAAGTCGGGCG 60.159 50.000 0.00 0.00 0.00 6.13
3785 7652 3.538634 ACTGTCCTTAATAAGTCGGGC 57.461 47.619 0.00 0.00 0.00 6.13
3786 7653 7.754027 CGATTATACTGTCCTTAATAAGTCGGG 59.246 40.741 0.00 0.00 0.00 5.14
3787 7654 8.509690 TCGATTATACTGTCCTTAATAAGTCGG 58.490 37.037 0.00 0.53 0.00 4.79
3788 7655 9.544314 CTCGATTATACTGTCCTTAATAAGTCG 57.456 37.037 0.00 0.00 0.00 4.18
3789 7656 9.344309 GCTCGATTATACTGTCCTTAATAAGTC 57.656 37.037 0.00 0.00 0.00 3.01
3790 7657 8.305317 GGCTCGATTATACTGTCCTTAATAAGT 58.695 37.037 0.00 0.00 0.00 2.24
3791 7658 8.524487 AGGCTCGATTATACTGTCCTTAATAAG 58.476 37.037 0.00 0.00 0.00 1.73
3792 7659 8.418597 AGGCTCGATTATACTGTCCTTAATAA 57.581 34.615 0.00 0.00 0.00 1.40
3793 7660 9.524496 TTAGGCTCGATTATACTGTCCTTAATA 57.476 33.333 0.00 0.00 0.00 0.98
3794 7661 6.919775 AGGCTCGATTATACTGTCCTTAAT 57.080 37.500 0.00 0.00 0.00 1.40
3795 7662 7.828508 TTAGGCTCGATTATACTGTCCTTAA 57.171 36.000 0.00 0.00 0.00 1.85
3796 7663 7.122353 GGATTAGGCTCGATTATACTGTCCTTA 59.878 40.741 0.00 0.00 0.00 2.69
3797 7664 6.071278 GGATTAGGCTCGATTATACTGTCCTT 60.071 42.308 0.00 0.00 0.00 3.36
3798 7665 5.419471 GGATTAGGCTCGATTATACTGTCCT 59.581 44.000 0.00 0.00 0.00 3.85
3799 7666 5.394333 GGGATTAGGCTCGATTATACTGTCC 60.394 48.000 0.00 0.00 0.00 4.02
3800 7667 5.185249 TGGGATTAGGCTCGATTATACTGTC 59.815 44.000 0.00 0.00 0.00 3.51
3801 7668 5.084519 TGGGATTAGGCTCGATTATACTGT 58.915 41.667 0.00 0.00 0.00 3.55
3802 7669 5.655488 CTGGGATTAGGCTCGATTATACTG 58.345 45.833 0.00 0.00 0.00 2.74
3803 7670 4.160626 GCTGGGATTAGGCTCGATTATACT 59.839 45.833 0.00 0.00 0.00 2.12
3804 7671 4.434520 GCTGGGATTAGGCTCGATTATAC 58.565 47.826 0.00 0.00 0.00 1.47
3805 7672 3.451178 GGCTGGGATTAGGCTCGATTATA 59.549 47.826 0.00 0.00 39.89 0.98
3806 7673 2.237392 GGCTGGGATTAGGCTCGATTAT 59.763 50.000 0.00 0.00 39.89 1.28
3807 7674 1.623811 GGCTGGGATTAGGCTCGATTA 59.376 52.381 0.00 0.00 39.89 1.75
3808 7675 0.398318 GGCTGGGATTAGGCTCGATT 59.602 55.000 0.00 0.00 39.89 3.34
3809 7676 1.484444 GGGCTGGGATTAGGCTCGAT 61.484 60.000 0.00 0.00 42.40 3.59
3810 7677 2.140792 GGGCTGGGATTAGGCTCGA 61.141 63.158 0.00 0.00 42.40 4.04
3811 7678 2.105806 GAGGGCTGGGATTAGGCTCG 62.106 65.000 0.00 0.00 42.40 5.03
3812 7679 0.766288 AGAGGGCTGGGATTAGGCTC 60.766 60.000 0.00 0.00 42.40 4.70
3813 7680 0.766288 GAGAGGGCTGGGATTAGGCT 60.766 60.000 0.00 0.00 42.40 4.58
3814 7681 1.056700 TGAGAGGGCTGGGATTAGGC 61.057 60.000 0.00 0.00 42.08 3.93
3815 7682 0.761802 GTGAGAGGGCTGGGATTAGG 59.238 60.000 0.00 0.00 0.00 2.69
3816 7683 0.390860 CGTGAGAGGGCTGGGATTAG 59.609 60.000 0.00 0.00 0.00 1.73
3817 7684 1.686325 GCGTGAGAGGGCTGGGATTA 61.686 60.000 0.00 0.00 0.00 1.75
3818 7685 3.036429 GCGTGAGAGGGCTGGGATT 62.036 63.158 0.00 0.00 0.00 3.01
3819 7686 3.474570 GCGTGAGAGGGCTGGGAT 61.475 66.667 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.