Multiple sequence alignment - TraesCS1D01G155800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G155800 chr1D 100.000 8404 0 0 1 8404 219475479 219483882 0.000000e+00 15520.0
1 TraesCS1D01G155800 chr1D 97.664 214 5 0 6683 6896 219481946 219482159 1.330000e-97 368.0
2 TraesCS1D01G155800 chr1D 97.664 214 5 0 6468 6681 219482161 219482374 1.330000e-97 368.0
3 TraesCS1D01G155800 chr1D 92.121 165 13 0 4301 4465 324412389 324412225 5.070000e-57 233.0
4 TraesCS1D01G155800 chr1D 81.208 149 22 4 632 775 298009373 298009520 1.920000e-21 115.0
5 TraesCS1D01G155800 chr1D 83.810 105 10 1 3927 4024 423268703 423268599 8.980000e-15 93.5
6 TraesCS1D01G155800 chr1D 81.579 114 18 3 632 743 371703424 371703312 3.230000e-14 91.6
7 TraesCS1D01G155800 chr1D 89.796 49 3 2 474 520 295143343 295143391 2.530000e-05 62.1
8 TraesCS1D01G155800 chr1D 89.362 47 5 0 3939 3985 350639453 350639499 9.110000e-05 60.2
9 TraesCS1D01G155800 chr1D 89.130 46 3 2 477 520 426451973 426451928 1.000000e-03 56.5
10 TraesCS1D01G155800 chr1B 94.703 2794 101 22 840 3610 314561760 314564529 0.000000e+00 4296.0
11 TraesCS1D01G155800 chr1B 91.349 1468 54 11 3809 5231 314565069 314566508 0.000000e+00 1940.0
12 TraesCS1D01G155800 chr1B 92.758 1229 51 22 6801 8007 314568452 314569664 0.000000e+00 1742.0
13 TraesCS1D01G155800 chr1B 92.583 782 37 11 5712 6475 314567292 314568070 0.000000e+00 1103.0
14 TraesCS1D01G155800 chr1B 90.058 513 21 19 5229 5715 314566631 314567139 9.200000e-179 638.0
15 TraesCS1D01G155800 chr1B 86.511 556 46 13 93 644 314387151 314387681 1.220000e-162 584.0
16 TraesCS1D01G155800 chr1B 88.785 214 8 2 3607 3820 314564709 314564906 1.810000e-61 248.0
17 TraesCS1D01G155800 chr1B 92.727 165 12 0 4301 4465 436689151 436688987 1.090000e-58 239.0
18 TraesCS1D01G155800 chr1B 96.000 100 4 0 8305 8404 314569896 314569995 6.750000e-36 163.0
19 TraesCS1D01G155800 chr1B 92.708 96 1 1 6586 6681 314568452 314568541 5.290000e-27 134.0
20 TraesCS1D01G155800 chr1B 81.720 93 15 2 647 738 563984810 563984719 9.050000e-10 76.8
21 TraesCS1D01G155800 chr1A 93.564 1274 44 8 6718 7968 282550527 282551785 0.000000e+00 1864.0
22 TraesCS1D01G155800 chr1A 94.283 1102 48 7 826 1919 282545132 282546226 0.000000e+00 1672.0
23 TraesCS1D01G155800 chr1A 95.256 780 35 2 1924 2701 282546530 282547309 0.000000e+00 1234.0
24 TraesCS1D01G155800 chr1A 96.810 721 22 1 4461 5180 282548949 282549669 0.000000e+00 1203.0
25 TraesCS1D01G155800 chr1A 95.701 628 19 7 2986 3609 282547308 282547931 0.000000e+00 1003.0
26 TraesCS1D01G155800 chr1A 91.792 597 26 12 6103 6681 282550114 282550705 0.000000e+00 809.0
27 TraesCS1D01G155800 chr1A 94.495 436 19 4 93 524 282542837 282543271 0.000000e+00 667.0
28 TraesCS1D01G155800 chr1A 94.236 399 19 2 8010 8404 282551965 282552363 2.590000e-169 606.0
29 TraesCS1D01G155800 chr1A 91.626 406 21 4 3910 4302 282548545 282548950 4.430000e-152 549.0
30 TraesCS1D01G155800 chr1A 89.262 149 12 2 3732 3879 282548085 282548230 5.180000e-42 183.0
31 TraesCS1D01G155800 chr1A 90.441 136 13 0 5181 5316 282549833 282549968 6.700000e-41 180.0
32 TraesCS1D01G155800 chr1A 93.860 114 7 0 3607 3720 282547987 282548100 1.120000e-38 172.0
33 TraesCS1D01G155800 chr1A 82.727 110 12 1 3922 4024 519270466 519270357 3.230000e-14 91.6
34 TraesCS1D01G155800 chr1A 85.333 75 10 1 3916 3989 495698976 495699050 9.050000e-10 76.8
35 TraesCS1D01G155800 chr1A 85.294 68 10 0 3922 3989 380891936 380891869 4.210000e-08 71.3
36 TraesCS1D01G155800 chr1A 89.362 47 5 0 474 520 368346140 368346186 9.110000e-05 60.2
37 TraesCS1D01G155800 chr5D 84.038 733 73 11 5364 6075 441249813 441249104 0.000000e+00 665.0
38 TraesCS1D01G155800 chr5D 91.743 109 9 0 4106 4214 371860610 371860718 1.460000e-32 152.0
39 TraesCS1D01G155800 chr5D 83.333 84 8 5 440 521 39012553 39012632 1.170000e-08 73.1
40 TraesCS1D01G155800 chr7D 78.342 748 108 32 5365 6075 562217410 562216680 1.300000e-117 435.0
41 TraesCS1D01G155800 chr7D 94.444 162 9 0 4301 4462 183790423 183790262 5.040000e-62 250.0
42 TraesCS1D01G155800 chr7D 91.228 114 8 2 4106 4217 414373149 414373036 4.060000e-33 154.0
43 TraesCS1D01G155800 chr7D 89.655 116 10 2 4099 4212 310990186 310990301 6.800000e-31 147.0
44 TraesCS1D01G155800 chr7D 80.172 116 17 4 3915 4024 602101075 602100960 1.940000e-11 82.4
45 TraesCS1D01G155800 chr5A 93.210 162 11 0 4301 4462 320214244 320214405 1.090000e-58 239.0
46 TraesCS1D01G155800 chr5A 93.210 162 11 0 4301 4462 653299601 653299440 1.090000e-58 239.0
47 TraesCS1D01G155800 chr5A 85.849 106 15 0 632 737 440666767 440666662 6.890000e-21 113.0
48 TraesCS1D01G155800 chr5A 85.000 100 15 0 637 736 6410796 6410697 1.490000e-17 102.0
49 TraesCS1D01G155800 chr5A 86.301 73 10 0 3915 3987 600889902 600889830 6.990000e-11 80.5
50 TraesCS1D01G155800 chr5A 81.633 98 11 6 418 512 27695165 27695258 3.250000e-09 75.0
51 TraesCS1D01G155800 chr2A 92.262 168 13 0 4301 4468 184561315 184561148 1.090000e-58 239.0
52 TraesCS1D01G155800 chr2A 81.818 110 12 2 3914 4016 104781993 104782101 1.500000e-12 86.1
53 TraesCS1D01G155800 chr2A 90.769 65 5 1 5185 5249 367584947 367584884 1.500000e-12 86.1
54 TraesCS1D01G155800 chr7A 91.765 170 14 0 4297 4466 494786994 494786825 3.920000e-58 237.0
55 TraesCS1D01G155800 chr7A 92.593 81 6 0 5994 6074 119783988 119784068 5.330000e-22 117.0
56 TraesCS1D01G155800 chr7A 83.158 95 7 4 3922 4008 188573593 188573686 2.520000e-10 78.7
57 TraesCS1D01G155800 chr7A 88.710 62 5 1 5185 5244 648558458 648558397 3.250000e-09 75.0
58 TraesCS1D01G155800 chr7A 79.412 102 14 1 3922 4016 652518365 652518466 1.960000e-06 65.8
59 TraesCS1D01G155800 chr4D 91.667 168 14 0 4297 4464 43644872 43645039 5.070000e-57 233.0
60 TraesCS1D01G155800 chr4D 92.523 107 8 0 4106 4212 259497365 259497259 4.060000e-33 154.0
61 TraesCS1D01G155800 chr4D 80.208 192 30 6 636 821 356567919 356568108 4.090000e-28 137.0
62 TraesCS1D01G155800 chr4D 84.722 72 11 0 3916 3987 108861125 108861196 1.170000e-08 73.1
63 TraesCS1D01G155800 chr4D 97.297 37 1 0 632 668 445743407 445743371 7.040000e-06 63.9
64 TraesCS1D01G155800 chr4D 93.023 43 3 0 648 690 507023424 507023382 7.040000e-06 63.9
65 TraesCS1D01G155800 chr7B 92.241 116 7 2 4099 4212 357651475 357651590 6.750000e-36 163.0
66 TraesCS1D01G155800 chr7B 82.727 110 15 1 629 738 17851428 17851533 2.500000e-15 95.3
67 TraesCS1D01G155800 chr7B 81.818 121 14 7 3910 4023 675998888 675998769 2.500000e-15 95.3
68 TraesCS1D01G155800 chr7B 80.374 107 16 4 3914 4016 23096138 23096033 9.050000e-10 76.8
69 TraesCS1D01G155800 chr7B 95.238 42 2 0 93 134 328921136 328921095 5.440000e-07 67.6
70 TraesCS1D01G155800 chr3B 90.000 120 9 3 4106 4224 672778079 672778196 1.460000e-32 152.0
71 TraesCS1D01G155800 chr3B 75.897 195 40 6 632 821 9580407 9580599 8.980000e-15 93.5
72 TraesCS1D01G155800 chr3B 91.837 49 1 2 466 513 819286241 819286195 1.960000e-06 65.8
73 TraesCS1D01G155800 chr3B 95.000 40 2 0 5194 5233 159938967 159938928 7.040000e-06 63.9
74 TraesCS1D01G155800 chr2B 87.402 127 13 3 4106 4229 768404678 768404552 8.790000e-30 143.0
75 TraesCS1D01G155800 chr2B 89.610 77 6 2 445 520 420508067 420507992 6.940000e-16 97.1
76 TraesCS1D01G155800 chr2B 89.831 59 6 0 5186 5244 368306761 368306703 9.050000e-10 76.8
77 TraesCS1D01G155800 chr2B 100.000 31 0 0 5365 5395 136536428 136536458 3.280000e-04 58.4
78 TraesCS1D01G155800 chr3A 83.453 139 19 2 636 770 31590081 31590219 8.860000e-25 126.0
79 TraesCS1D01G155800 chr4B 78.836 189 33 5 639 821 440050619 440050806 4.120000e-23 121.0
80 TraesCS1D01G155800 chr4B 80.000 130 16 7 3911 4031 71341811 71341939 4.180000e-13 87.9
81 TraesCS1D01G155800 chr4B 87.500 72 6 3 3921 3991 653443271 653443340 6.990000e-11 80.5
82 TraesCS1D01G155800 chr4B 87.879 66 8 0 3922 3987 167934375 167934310 2.520000e-10 78.7
83 TraesCS1D01G155800 chr4B 85.000 80 9 3 638 716 657477982 657478059 2.520000e-10 78.7
84 TraesCS1D01G155800 chr4B 80.374 107 15 3 3915 4021 481494970 481495070 9.050000e-10 76.8
85 TraesCS1D01G155800 chr4B 85.294 68 7 3 436 501 32895749 32895815 5.440000e-07 67.6
86 TraesCS1D01G155800 chr4B 87.931 58 4 3 466 520 617384633 617384576 1.960000e-06 65.8
87 TraesCS1D01G155800 chr5B 88.776 98 9 2 640 736 543818523 543818427 1.480000e-22 119.0
88 TraesCS1D01G155800 chr5B 81.081 148 22 4 632 774 637111633 637111779 6.890000e-21 113.0
89 TraesCS1D01G155800 chr3D 81.944 144 20 4 632 770 21886550 21886692 5.330000e-22 117.0
90 TraesCS1D01G155800 chr3D 78.857 175 28 7 637 804 584545478 584545650 8.920000e-20 110.0
91 TraesCS1D01G155800 chr3D 77.778 180 32 6 636 809 506698755 506698578 4.150000e-18 104.0
92 TraesCS1D01G155800 chr6B 84.167 120 18 1 627 746 156411711 156411593 1.920000e-21 115.0
93 TraesCS1D01G155800 chr6B 91.071 56 4 1 466 520 609841111 609841056 3.250000e-09 75.0
94 TraesCS1D01G155800 chr6B 91.111 45 2 2 5250 5293 98863434 98863477 9.110000e-05 60.2
95 TraesCS1D01G155800 chr2D 88.732 71 8 0 5193 5263 291859334 291859404 4.180000e-13 87.9
96 TraesCS1D01G155800 chr2D 91.489 47 3 1 5187 5233 612999381 612999426 7.040000e-06 63.9
97 TraesCS1D01G155800 chr4A 83.908 87 10 1 3942 4024 467529220 467529134 6.990000e-11 80.5
98 TraesCS1D01G155800 chr4A 97.297 37 1 0 5192 5228 465800235 465800271 7.040000e-06 63.9
99 TraesCS1D01G155800 chr6D 97.826 46 0 1 466 510 405582416 405582371 2.520000e-10 78.7
100 TraesCS1D01G155800 chr6D 81.333 75 14 0 3915 3989 363909394 363909468 2.530000e-05 62.1
101 TraesCS1D01G155800 chr6A 89.831 59 5 1 466 523 551979501 551979443 3.250000e-09 75.0
102 TraesCS1D01G155800 chr6A 83.784 74 12 0 3916 3989 588365340 588365413 4.210000e-08 71.3
103 TraesCS1D01G155800 chr6A 82.667 75 13 0 3915 3989 505027171 505027245 5.440000e-07 67.6
104 TraesCS1D01G155800 chrUn 97.059 34 1 0 5260 5293 21191221 21191188 3.280000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G155800 chr1D 219475479 219483882 8403 False 5418.666667 15520 98.442667 1 8404 3 chr1D.!!$F4 8403
1 TraesCS1D01G155800 chr1B 314561760 314569995 8235 False 1283.000000 4296 92.368000 840 8404 8 chr1B.!!$F2 7564
2 TraesCS1D01G155800 chr1B 314387151 314387681 530 False 584.000000 584 86.511000 93 644 1 chr1B.!!$F1 551
3 TraesCS1D01G155800 chr1A 282542837 282552363 9526 False 845.166667 1864 93.443833 93 8404 12 chr1A.!!$F3 8311
4 TraesCS1D01G155800 chr5D 441249104 441249813 709 True 665.000000 665 84.038000 5364 6075 1 chr5D.!!$R1 711
5 TraesCS1D01G155800 chr7D 562216680 562217410 730 True 435.000000 435 78.342000 5365 6075 1 chr7D.!!$R3 710

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
706 712 0.107703 TAGGCCTTCAAGCGATGTGG 60.108 55.000 12.58 0.00 0.00 4.17 F
932 2540 0.174845 CTCGAGCCCATTAACCGTCA 59.825 55.000 0.00 0.00 0.00 4.35 F
1447 3058 1.074167 ATCCTCTTCCCTCGCCCAT 60.074 57.895 0.00 0.00 0.00 4.00 F
1614 3232 1.268352 TGCCGCTGGTTAAATTGTGAC 59.732 47.619 0.00 0.00 0.00 3.67 F
1836 3455 2.026449 ACAAGCTTAGCAGGCTCATTCT 60.026 45.455 7.07 0.00 39.30 2.40 F
1869 3488 2.752354 TCCCCAAATGAACTATGTTGCG 59.248 45.455 0.00 0.00 0.00 4.85 F
2307 4226 2.799126 TTGTTGATCCGGCCATTACT 57.201 45.000 2.24 0.00 0.00 2.24 F
3993 6626 0.323633 CCACCTCAACATGCATGGGA 60.324 55.000 29.41 23.37 0.00 4.37 F
4783 7432 0.386476 ATGCTGCAGTTGGTGTTGTG 59.614 50.000 16.64 0.00 0.00 3.33 F
6054 9321 0.849094 AACCTGGTAATCTGGGGGCA 60.849 55.000 0.00 0.00 38.62 5.36 F
6785 10357 0.473755 TCTTGTCATGTGGCACTGGT 59.526 50.000 19.83 1.93 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2091 4010 3.576648 GTTCTCAACTAACACCCGAGAG 58.423 50.000 0.00 0.0 34.42 3.20 R
2819 4741 1.470890 TCGATCCCGTTTTGAAATGGC 59.529 47.619 8.85 0.0 42.50 4.40 R
3329 5252 0.752054 CTGCAAAACCTTTCCAGCCA 59.248 50.000 0.00 0.0 0.00 4.75 R
3547 5473 0.950836 CACCGACCAATGCAAAGTGA 59.049 50.000 0.00 0.0 0.00 3.41 R
3816 6159 1.290009 GCACACCCTGGAACATTGC 59.710 57.895 0.00 0.0 38.20 3.56 R
3875 6218 6.017357 CAGGGGAAAAACACTTTGTAGTAGTC 60.017 42.308 0.00 0.0 31.96 2.59 R
4295 6940 1.041437 GGAACGGAGGGAGTAGATGG 58.959 60.000 0.00 0.0 0.00 3.51 R
5357 8409 0.034896 GGAGACAGCCCTGAAACGAA 59.965 55.000 1.69 0.0 0.00 3.85 R
6766 10338 0.473755 ACCAGTGCCACATGACAAGA 59.526 50.000 0.00 0.0 0.00 3.02 R
7180 10753 0.669619 CATGCAATTGCCGGCTATGA 59.330 50.000 29.70 13.5 41.18 2.15 R
8160 11895 0.734253 GTCAGCAGCTTCGTCGTGAT 60.734 55.000 0.00 0.0 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.200092 AGACAAATTCTAATCCCCGAAGC 58.800 43.478 0.00 0.00 30.17 3.86
23 24 3.945285 GACAAATTCTAATCCCCGAAGCA 59.055 43.478 0.00 0.00 0.00 3.91
24 25 4.340617 ACAAATTCTAATCCCCGAAGCAA 58.659 39.130 0.00 0.00 0.00 3.91
25 26 4.399303 ACAAATTCTAATCCCCGAAGCAAG 59.601 41.667 0.00 0.00 0.00 4.01
26 27 4.503714 AATTCTAATCCCCGAAGCAAGA 57.496 40.909 0.00 0.00 0.00 3.02
27 28 3.992943 TTCTAATCCCCGAAGCAAGAA 57.007 42.857 0.00 0.00 0.00 2.52
28 29 3.992943 TCTAATCCCCGAAGCAAGAAA 57.007 42.857 0.00 0.00 0.00 2.52
29 30 3.606687 TCTAATCCCCGAAGCAAGAAAC 58.393 45.455 0.00 0.00 0.00 2.78
30 31 2.286365 AATCCCCGAAGCAAGAAACA 57.714 45.000 0.00 0.00 0.00 2.83
31 32 2.514458 ATCCCCGAAGCAAGAAACAT 57.486 45.000 0.00 0.00 0.00 2.71
32 33 3.644966 ATCCCCGAAGCAAGAAACATA 57.355 42.857 0.00 0.00 0.00 2.29
33 34 3.426787 TCCCCGAAGCAAGAAACATAA 57.573 42.857 0.00 0.00 0.00 1.90
34 35 3.757270 TCCCCGAAGCAAGAAACATAAA 58.243 40.909 0.00 0.00 0.00 1.40
35 36 4.145807 TCCCCGAAGCAAGAAACATAAAA 58.854 39.130 0.00 0.00 0.00 1.52
36 37 4.585162 TCCCCGAAGCAAGAAACATAAAAA 59.415 37.500 0.00 0.00 0.00 1.94
57 58 4.708726 AATTCACATAGGTGCAAGAAGC 57.291 40.909 1.79 0.00 44.87 3.86
68 69 2.061740 GCAAGAAGCAGCAAGGAAAG 57.938 50.000 0.00 0.00 44.79 2.62
69 70 1.610522 GCAAGAAGCAGCAAGGAAAGA 59.389 47.619 0.00 0.00 44.79 2.52
70 71 2.230750 GCAAGAAGCAGCAAGGAAAGAT 59.769 45.455 0.00 0.00 44.79 2.40
71 72 3.441572 GCAAGAAGCAGCAAGGAAAGATA 59.558 43.478 0.00 0.00 44.79 1.98
72 73 4.097589 GCAAGAAGCAGCAAGGAAAGATAT 59.902 41.667 0.00 0.00 44.79 1.63
73 74 5.579718 CAAGAAGCAGCAAGGAAAGATATG 58.420 41.667 0.00 0.00 0.00 1.78
74 75 4.205587 AGAAGCAGCAAGGAAAGATATGG 58.794 43.478 0.00 0.00 0.00 2.74
75 76 3.939740 AGCAGCAAGGAAAGATATGGA 57.060 42.857 0.00 0.00 0.00 3.41
76 77 3.818180 AGCAGCAAGGAAAGATATGGAG 58.182 45.455 0.00 0.00 0.00 3.86
77 78 3.457380 AGCAGCAAGGAAAGATATGGAGA 59.543 43.478 0.00 0.00 0.00 3.71
78 79 3.814283 GCAGCAAGGAAAGATATGGAGAG 59.186 47.826 0.00 0.00 0.00 3.20
79 80 4.444022 GCAGCAAGGAAAGATATGGAGAGA 60.444 45.833 0.00 0.00 0.00 3.10
80 81 5.299148 CAGCAAGGAAAGATATGGAGAGAG 58.701 45.833 0.00 0.00 0.00 3.20
81 82 5.070180 CAGCAAGGAAAGATATGGAGAGAGA 59.930 44.000 0.00 0.00 0.00 3.10
82 83 5.305128 AGCAAGGAAAGATATGGAGAGAGAG 59.695 44.000 0.00 0.00 0.00 3.20
83 84 5.540911 CAAGGAAAGATATGGAGAGAGAGC 58.459 45.833 0.00 0.00 0.00 4.09
84 85 4.813809 AGGAAAGATATGGAGAGAGAGCA 58.186 43.478 0.00 0.00 0.00 4.26
85 86 5.405279 AGGAAAGATATGGAGAGAGAGCAT 58.595 41.667 0.00 0.00 0.00 3.79
86 87 5.845614 AGGAAAGATATGGAGAGAGAGCATT 59.154 40.000 0.00 0.00 0.00 3.56
87 88 6.329723 AGGAAAGATATGGAGAGAGAGCATTT 59.670 38.462 0.00 0.00 0.00 2.32
88 89 6.427547 GGAAAGATATGGAGAGAGAGCATTTG 59.572 42.308 0.00 0.00 0.00 2.32
89 90 5.486735 AGATATGGAGAGAGAGCATTTGG 57.513 43.478 0.00 0.00 0.00 3.28
90 91 5.153675 AGATATGGAGAGAGAGCATTTGGA 58.846 41.667 0.00 0.00 0.00 3.53
91 92 3.842007 ATGGAGAGAGAGCATTTGGAG 57.158 47.619 0.00 0.00 0.00 3.86
145 146 6.385176 AGAATGAGAGAGATACATCAAACCCA 59.615 38.462 0.00 0.00 0.00 4.51
289 290 7.095144 GGAGATCTCATTAAGCATCAATGACAG 60.095 40.741 23.85 0.00 37.46 3.51
297 298 2.169978 AGCATCAATGACAGCTAGCTGA 59.830 45.455 43.42 27.03 46.30 4.26
303 304 0.457443 TGACAGCTAGCTGACGATGG 59.543 55.000 43.42 21.13 46.30 3.51
304 305 0.873743 GACAGCTAGCTGACGATGGC 60.874 60.000 43.42 19.82 46.30 4.40
305 306 1.142531 CAGCTAGCTGACGATGGCA 59.857 57.895 36.47 0.00 46.30 4.92
324 325 9.546909 CGATGGCATGTGTATATTTCTTTAATC 57.453 33.333 3.81 0.00 0.00 1.75
511 516 4.085357 TGAAGTTGCTTACCACACATCT 57.915 40.909 0.00 0.00 0.00 2.90
555 560 7.496747 TGAATTGGATGTCGATGAGTACATAA 58.503 34.615 0.00 0.00 36.48 1.90
600 606 2.487934 AGGCTTCATATGATGACACGC 58.512 47.619 22.67 11.37 39.39 5.34
634 640 1.297598 GAATGCCGCGAATCAACCG 60.298 57.895 8.23 0.00 0.00 4.44
635 641 2.646799 GAATGCCGCGAATCAACCGG 62.647 60.000 8.23 0.00 44.58 5.28
649 655 2.967201 TCAACCGGAGTTCAAGTCCTAA 59.033 45.455 9.46 0.00 35.52 2.69
674 680 2.253603 GACATTGGTGCTCGCATTTTC 58.746 47.619 0.00 0.00 0.00 2.29
696 702 8.429237 TTTCTTGGATTTATTTTAGGCCTTCA 57.571 30.769 12.58 0.00 0.00 3.02
697 703 8.429237 TTCTTGGATTTATTTTAGGCCTTCAA 57.571 30.769 12.58 4.32 0.00 2.69
706 712 0.107703 TAGGCCTTCAAGCGATGTGG 60.108 55.000 12.58 0.00 0.00 4.17
707 713 1.377202 GGCCTTCAAGCGATGTGGA 60.377 57.895 0.00 0.00 0.00 4.02
727 733 3.056465 GGATTCAGTGAGAGGAGACGTTT 60.056 47.826 0.00 0.00 0.00 3.60
728 734 3.644884 TTCAGTGAGAGGAGACGTTTC 57.355 47.619 0.00 0.00 0.00 2.78
737 743 2.740981 GAGGAGACGTTTCTGTCGACTA 59.259 50.000 17.92 1.74 43.70 2.59
738 744 2.483491 AGGAGACGTTTCTGTCGACTAC 59.517 50.000 17.92 8.60 43.70 2.73
747 753 2.922779 TGTCGACTACAGACTGCGA 58.077 52.632 17.92 0.27 39.24 5.10
748 754 3.293303 GTCGACTACAGACTGCGAC 57.707 57.895 8.70 14.66 43.37 5.19
749 755 0.518764 GTCGACTACAGACTGCGACG 60.519 60.000 8.70 12.14 41.26 5.12
750 756 0.668401 TCGACTACAGACTGCGACGA 60.668 55.000 13.01 13.01 0.00 4.20
775 781 6.873605 ACTTCGTTAATCTCAACATGATGTGA 59.126 34.615 9.73 9.73 0.00 3.58
776 782 6.892310 TCGTTAATCTCAACATGATGTGAG 57.108 37.500 12.39 13.96 31.43 3.51
778 784 5.582269 CGTTAATCTCAACATGATGTGAGGT 59.418 40.000 18.27 12.39 31.26 3.85
785 791 5.132502 TCAACATGATGTGAGGTTTGAGTT 58.867 37.500 0.00 0.00 0.00 3.01
789 795 5.471456 ACATGATGTGAGGTTTGAGTTTCTC 59.529 40.000 0.00 0.00 0.00 2.87
791 797 2.833794 TGTGAGGTTTGAGTTTCTCGG 58.166 47.619 0.00 0.00 32.35 4.63
793 799 3.118555 TGTGAGGTTTGAGTTTCTCGGAA 60.119 43.478 0.00 0.00 32.35 4.30
797 803 3.134081 AGGTTTGAGTTTCTCGGAAGTGA 59.866 43.478 0.00 0.00 32.35 3.41
805 811 4.956700 AGTTTCTCGGAAGTGATCATAGGA 59.043 41.667 0.00 0.00 33.15 2.94
812 818 4.216687 CGGAAGTGATCATAGGAGTAGGAC 59.783 50.000 0.00 0.00 0.00 3.85
822 828 1.372499 GAGTAGGACGTGCGTGCAA 60.372 57.895 17.57 0.00 38.98 4.08
823 829 0.736325 GAGTAGGACGTGCGTGCAAT 60.736 55.000 17.57 3.66 38.98 3.56
824 830 0.528924 AGTAGGACGTGCGTGCAATA 59.471 50.000 17.57 0.63 38.98 1.90
837 2436 8.949953 ACGTGCGTGCAATATAAATTAATTAAC 58.050 29.630 0.01 0.00 0.00 2.01
838 2437 8.948946 CGTGCGTGCAATATAAATTAATTAACA 58.051 29.630 0.01 0.00 0.00 2.41
855 2454 3.695830 AACAAACGCCTTCCTCTCATA 57.304 42.857 0.00 0.00 0.00 2.15
856 2455 3.695830 ACAAACGCCTTCCTCTCATAA 57.304 42.857 0.00 0.00 0.00 1.90
932 2540 0.174845 CTCGAGCCCATTAACCGTCA 59.825 55.000 0.00 0.00 0.00 4.35
950 2558 2.680352 GGCAGGGACAGACCGAGA 60.680 66.667 0.00 0.00 40.11 4.04
951 2559 2.574399 GCAGGGACAGACCGAGAC 59.426 66.667 0.00 0.00 40.11 3.36
952 2560 3.007973 GCAGGGACAGACCGAGACC 62.008 68.421 0.00 0.00 40.11 3.85
953 2561 2.361357 AGGGACAGACCGAGACCG 60.361 66.667 0.00 0.00 40.11 4.79
954 2562 2.360852 GGGACAGACCGAGACCGA 60.361 66.667 0.00 0.00 40.11 4.69
955 2563 2.408241 GGGACAGACCGAGACCGAG 61.408 68.421 0.00 0.00 40.11 4.63
974 2582 1.592223 CTCGAAACCCTCTTCCGCT 59.408 57.895 0.00 0.00 0.00 5.52
1443 3054 2.066999 ACCCATCCTCTTCCCTCGC 61.067 63.158 0.00 0.00 0.00 5.03
1447 3058 1.074167 ATCCTCTTCCCTCGCCCAT 60.074 57.895 0.00 0.00 0.00 4.00
1467 3078 4.445453 CATTGTCTTCTCGATTGGATCCA 58.555 43.478 11.44 11.44 0.00 3.41
1599 3217 6.787085 ATGAAGTTTAATACTAGATGCCGC 57.213 37.500 0.00 0.00 35.54 6.53
1614 3232 1.268352 TGCCGCTGGTTAAATTGTGAC 59.732 47.619 0.00 0.00 0.00 3.67
1667 3285 5.380043 AGATGGGGACTTTGTAAGCATATG 58.620 41.667 0.00 0.00 0.00 1.78
1687 3305 3.786553 TGGATGTGACTAGGTGTAAGGT 58.213 45.455 0.00 0.00 0.00 3.50
1693 3311 6.032956 TGTGACTAGGTGTAAGGTTGTATG 57.967 41.667 0.00 0.00 0.00 2.39
1701 3319 2.224892 TGTAAGGTTGTATGCCCTGCAA 60.225 45.455 0.00 0.00 43.62 4.08
1836 3455 2.026449 ACAAGCTTAGCAGGCTCATTCT 60.026 45.455 7.07 0.00 39.30 2.40
1855 3474 4.561500 TCTACGTGATGATTTCCCCAAA 57.438 40.909 0.00 0.00 0.00 3.28
1869 3488 2.752354 TCCCCAAATGAACTATGTTGCG 59.248 45.455 0.00 0.00 0.00 4.85
1873 3492 4.578516 CCCAAATGAACTATGTTGCGGATA 59.421 41.667 0.00 0.00 0.00 2.59
1917 3536 9.237187 TGTTTAATGCAATAGTTCCTTGTATCA 57.763 29.630 0.00 0.00 30.08 2.15
1922 3541 7.144722 TGCAATAGTTCCTTGTATCAAACTG 57.855 36.000 0.00 0.00 34.09 3.16
2043 3962 3.444742 TCATGCCTGCAATAAAAGGTCAG 59.555 43.478 0.00 0.00 35.86 3.51
2091 4010 6.968131 TGCTAATTATGATTATGGTCGAGC 57.032 37.500 7.89 7.89 0.00 5.03
2307 4226 2.799126 TTGTTGATCCGGCCATTACT 57.201 45.000 2.24 0.00 0.00 2.24
2355 4274 5.869344 GCTTCTGTGATGTCATGTTACAGTA 59.131 40.000 15.60 9.33 39.66 2.74
2484 4403 6.261603 TGATTGAGCCATCACACTATTCATTC 59.738 38.462 0.00 0.00 34.35 2.67
2490 4409 5.727791 GCCATCACACTATTCATTCGTGTTC 60.728 44.000 0.00 0.00 39.66 3.18
2819 4741 5.874895 ATATGCCTTCATGATTGATGTCG 57.125 39.130 0.00 0.00 34.22 4.35
2824 4746 3.317149 CCTTCATGATTGATGTCGCCATT 59.683 43.478 0.00 0.00 33.29 3.16
2826 4748 4.556942 TCATGATTGATGTCGCCATTTC 57.443 40.909 0.00 0.00 33.29 2.17
2831 4753 4.922692 TGATTGATGTCGCCATTTCAAAAC 59.077 37.500 0.00 0.00 0.00 2.43
2890 4812 3.618507 GCCTGTGACACTCTGCTTTCTAT 60.619 47.826 7.20 0.00 0.00 1.98
2958 4881 7.856145 AATTGTGTTTGGTTTGCATTAGAAA 57.144 28.000 0.00 0.00 0.00 2.52
3008 4931 6.064717 GGCCATGGTGTAGATTCTTTTCTAT 58.935 40.000 14.67 0.00 31.19 1.98
3329 5252 8.037758 CAGTGATCTTTTTGATACTCCTGTACT 58.962 37.037 0.00 0.00 35.14 2.73
3547 5473 8.324306 ACACCTAATGCAGCATAAGTCATATAT 58.676 33.333 8.75 0.00 0.00 0.86
3726 5896 9.134734 CTTTACTACAACAACAACAACAACAAT 57.865 29.630 0.00 0.00 0.00 2.71
3729 5899 8.455598 ACTACAACAACAACAACAACAATAAC 57.544 30.769 0.00 0.00 0.00 1.89
3730 5900 8.082852 ACTACAACAACAACAACAACAATAACA 58.917 29.630 0.00 0.00 0.00 2.41
3731 5901 7.715265 ACAACAACAACAACAACAATAACAA 57.285 28.000 0.00 0.00 0.00 2.83
3732 5902 7.568433 ACAACAACAACAACAACAATAACAAC 58.432 30.769 0.00 0.00 0.00 3.32
3733 5903 7.224753 ACAACAACAACAACAACAATAACAACA 59.775 29.630 0.00 0.00 0.00 3.33
3734 5904 7.715265 ACAACAACAACAACAATAACAACAA 57.285 28.000 0.00 0.00 0.00 2.83
3735 5905 7.568433 ACAACAACAACAACAATAACAACAAC 58.432 30.769 0.00 0.00 0.00 3.32
3736 5906 7.224753 ACAACAACAACAACAATAACAACAACA 59.775 29.630 0.00 0.00 0.00 3.33
3737 5907 7.715265 ACAACAACAACAATAACAACAACAA 57.285 28.000 0.00 0.00 0.00 2.83
3738 5908 7.568433 ACAACAACAACAATAACAACAACAAC 58.432 30.769 0.00 0.00 0.00 3.32
3739 5909 7.224753 ACAACAACAACAATAACAACAACAACA 59.775 29.630 0.00 0.00 0.00 3.33
3740 5910 7.715265 ACAACAACAATAACAACAACAACAA 57.285 28.000 0.00 0.00 0.00 2.83
3782 5952 6.482973 CCCAAACAAGTTGTTAATCATGCTTT 59.517 34.615 21.14 0.00 40.14 3.51
3784 5954 6.529463 AACAAGTTGTTAATCATGCTTTGC 57.471 33.333 19.59 0.00 39.09 3.68
3872 6215 7.661127 TTGCGTTTACTAAATCTGTATGTGT 57.339 32.000 0.00 0.00 0.00 3.72
3875 6218 8.865978 TGCGTTTACTAAATCTGTATGTGTAAG 58.134 33.333 0.00 0.00 0.00 2.34
3889 6232 9.343103 CTGTATGTGTAAGACTACTACAAAGTG 57.657 37.037 0.00 0.00 36.36 3.16
3894 6237 9.439500 TGTGTAAGACTACTACAAAGTGTTTTT 57.561 29.630 0.00 0.00 36.36 1.94
3896 6239 9.101655 TGTAAGACTACTACAAAGTGTTTTTCC 57.898 33.333 0.00 0.00 36.36 3.13
3897 6240 7.563888 AAGACTACTACAAAGTGTTTTTCCC 57.436 36.000 0.00 0.00 36.36 3.97
3898 6241 6.060136 AGACTACTACAAAGTGTTTTTCCCC 58.940 40.000 0.00 0.00 36.36 4.81
3899 6242 6.009908 ACTACTACAAAGTGTTTTTCCCCT 57.990 37.500 0.00 0.00 36.36 4.79
3900 6243 5.826208 ACTACTACAAAGTGTTTTTCCCCTG 59.174 40.000 0.00 0.00 36.36 4.45
3901 6244 4.862371 ACTACAAAGTGTTTTTCCCCTGA 58.138 39.130 0.00 0.00 33.57 3.86
3993 6626 0.323633 CCACCTCAACATGCATGGGA 60.324 55.000 29.41 23.37 0.00 4.37
4046 6679 5.299148 TGGGAAAATGCTCAAATGTTTCAG 58.701 37.500 0.00 0.00 31.28 3.02
4049 6682 6.928492 GGGAAAATGCTCAAATGTTTCAGTTA 59.072 34.615 0.00 0.00 31.28 2.24
4052 6685 6.956299 AATGCTCAAATGTTTCAGTTATGC 57.044 33.333 0.00 0.00 0.00 3.14
4139 6774 6.428159 GGATCCATATTACTTGTCGCTCAAAT 59.572 38.462 6.95 0.00 35.48 2.32
4183 6818 4.632153 ACGTCTAGATACATCCATTTGGC 58.368 43.478 0.00 0.00 34.44 4.52
4200 6835 3.188159 TGGCCGACAAGTAATATGGAC 57.812 47.619 0.00 0.00 0.00 4.02
4251 6896 8.611757 TGTTCATGTTCATATAACCAAATCTCG 58.388 33.333 0.00 0.00 0.00 4.04
4278 6923 6.364165 CGAAATATATTGCAAGCAATTCCTGG 59.636 38.462 23.48 6.19 43.32 4.45
4287 6932 1.865788 GCAATTCCTGGAGCAACGCA 61.866 55.000 0.00 0.00 0.00 5.24
4295 6940 2.112815 GGAGCAACGCATGGGGTAC 61.113 63.158 14.94 1.74 0.00 3.34
4324 6969 8.006564 TCTACTCCCTCCGTTCCTAAATATAAA 58.993 37.037 0.00 0.00 0.00 1.40
4327 6972 7.513091 ACTCCCTCCGTTCCTAAATATAAATCT 59.487 37.037 0.00 0.00 0.00 2.40
4328 6973 8.271398 TCCCTCCGTTCCTAAATATAAATCTT 57.729 34.615 0.00 0.00 0.00 2.40
4641 7290 5.278266 GCTTACAGCAGTTACCATGTCAAAA 60.278 40.000 0.00 0.00 41.89 2.44
4783 7432 0.386476 ATGCTGCAGTTGGTGTTGTG 59.614 50.000 16.64 0.00 0.00 3.33
4965 7650 8.905660 TTGCAGTATAACAGTTGGTTTACTTA 57.094 30.769 0.00 0.00 40.96 2.24
5086 7771 2.159517 GCATTACCCTTCTGAAGTTGCG 60.160 50.000 15.72 1.06 0.00 4.85
5165 7850 9.052759 TGTATCCTTTCAGTCAAACTTTTCTAC 57.947 33.333 0.00 0.00 0.00 2.59
5223 8071 9.166173 CTCCAATCCATATTAATTATCGCTGAA 57.834 33.333 0.00 0.00 0.00 3.02
5282 8255 6.427853 CAGCGACAATTAATATGGATTGGAGA 59.572 38.462 13.06 0.00 37.53 3.71
5431 8511 3.333029 AGGGCCCAAAATTTCGAAATG 57.667 42.857 27.56 12.94 0.00 2.32
5553 8633 5.027737 CCGTGGACAAATAAATTCATGACG 58.972 41.667 0.00 0.00 0.00 4.35
5568 8648 1.254026 TGACGAAGATTCCGTGGACT 58.746 50.000 0.00 0.00 40.67 3.85
5582 8662 3.306780 CCGTGGACTAACTCAATCTGGTT 60.307 47.826 0.00 0.00 0.00 3.67
5734 8970 4.857679 ACTAGTAATCGAAGACAGGGACT 58.142 43.478 0.00 0.00 42.51 3.85
5752 8988 9.411189 ACAGGGACTAAATTAAGTAGACTAGAG 57.589 37.037 0.00 0.00 36.02 2.43
5768 9004 6.985117 AGACTAGAGAGTGATACCTAGTACG 58.015 44.000 0.00 0.00 41.11 3.67
5787 9023 2.307768 CGCTAGTAGTGGAGGATTGGA 58.692 52.381 2.56 0.00 0.00 3.53
5828 9070 4.415332 ACGTTCTGCGATCGCCGT 62.415 61.111 35.12 31.26 44.77 5.68
5965 9227 1.152902 TGGCTTTGCAGCTGAGTGT 60.153 52.632 20.43 0.00 46.44 3.55
5972 9234 1.005275 GCAGCTGAGTGTGCTCTCA 60.005 57.895 20.43 4.26 42.13 3.27
6022 9285 4.939052 AGCAGCTGGATTAATACGTACT 57.061 40.909 17.12 0.00 0.00 2.73
6054 9321 0.849094 AACCTGGTAATCTGGGGGCA 60.849 55.000 0.00 0.00 38.62 5.36
6080 9360 2.671384 TTTTGGGGGTCCTGCCTTGG 62.671 60.000 0.00 0.00 37.43 3.61
6095 9375 4.731853 TGGCCCCCTCCATCGACA 62.732 66.667 0.00 0.00 0.00 4.35
6096 9376 3.866582 GGCCCCCTCCATCGACAG 61.867 72.222 0.00 0.00 0.00 3.51
6195 9475 4.487714 ACTGATTTGGGATCGTACATGT 57.512 40.909 2.69 2.69 0.00 3.21
6196 9476 4.843728 ACTGATTTGGGATCGTACATGTT 58.156 39.130 2.30 0.00 0.00 2.71
6240 9520 8.383318 TCAAAGATAGAAAGTTTGACTTCTGG 57.617 34.615 0.00 0.00 37.47 3.86
6279 9562 6.664384 ACCTTATAGAAAAGAACGGAGAGAGT 59.336 38.462 0.00 0.00 0.00 3.24
6280 9563 7.833183 ACCTTATAGAAAAGAACGGAGAGAGTA 59.167 37.037 0.00 0.00 0.00 2.59
6281 9564 8.347035 CCTTATAGAAAAGAACGGAGAGAGTAG 58.653 40.741 0.00 0.00 0.00 2.57
6282 9565 8.804912 TTATAGAAAAGAACGGAGAGAGTAGT 57.195 34.615 0.00 0.00 0.00 2.73
6315 9598 9.238368 TGGTTATGCTACTGTAAAAAGCTTAAT 57.762 29.630 0.00 0.00 37.84 1.40
6482 9923 7.388460 AGTAGATGCGGTGTATAGGTTATAC 57.612 40.000 0.40 0.40 41.06 1.47
6489 9930 5.931532 CGGTGTATAGGTTATACTGTACCG 58.068 45.833 15.82 15.82 44.63 4.02
6658 10230 3.419793 CCAACTTTGGCTGGTCTGA 57.580 52.632 0.00 0.00 42.21 3.27
6659 10231 1.691196 CCAACTTTGGCTGGTCTGAA 58.309 50.000 0.00 0.00 42.21 3.02
6660 10232 2.031120 CCAACTTTGGCTGGTCTGAAA 58.969 47.619 0.00 0.00 42.21 2.69
6661 10233 2.430332 CCAACTTTGGCTGGTCTGAAAA 59.570 45.455 0.00 0.00 42.21 2.29
6662 10234 3.070015 CCAACTTTGGCTGGTCTGAAAAT 59.930 43.478 0.00 0.00 42.21 1.82
6663 10235 4.053295 CAACTTTGGCTGGTCTGAAAATG 58.947 43.478 0.00 0.00 0.00 2.32
6664 10236 3.299503 ACTTTGGCTGGTCTGAAAATGT 58.700 40.909 0.00 0.00 0.00 2.71
6665 10237 4.469657 ACTTTGGCTGGTCTGAAAATGTA 58.530 39.130 0.00 0.00 0.00 2.29
6666 10238 4.278419 ACTTTGGCTGGTCTGAAAATGTAC 59.722 41.667 0.00 0.00 0.00 2.90
6667 10239 2.422597 TGGCTGGTCTGAAAATGTACG 58.577 47.619 0.00 0.00 0.00 3.67
6668 10240 2.224426 TGGCTGGTCTGAAAATGTACGT 60.224 45.455 0.00 0.00 0.00 3.57
6669 10241 2.159627 GGCTGGTCTGAAAATGTACGTG 59.840 50.000 0.00 0.00 0.00 4.49
6670 10242 2.412847 GCTGGTCTGAAAATGTACGTGC 60.413 50.000 0.00 0.00 0.00 5.34
6671 10243 2.805671 CTGGTCTGAAAATGTACGTGCA 59.194 45.455 9.28 9.28 0.00 4.57
6672 10244 3.407698 TGGTCTGAAAATGTACGTGCAT 58.592 40.909 13.79 13.79 0.00 3.96
6673 10245 3.188254 TGGTCTGAAAATGTACGTGCATG 59.812 43.478 20.14 3.82 0.00 4.06
6674 10246 3.435327 GGTCTGAAAATGTACGTGCATGA 59.565 43.478 20.14 9.49 0.00 3.07
6675 10247 4.094887 GGTCTGAAAATGTACGTGCATGAT 59.905 41.667 20.14 11.64 0.00 2.45
6676 10248 5.391950 GGTCTGAAAATGTACGTGCATGATT 60.392 40.000 20.14 17.00 0.00 2.57
6677 10249 6.086222 GTCTGAAAATGTACGTGCATGATTT 58.914 36.000 20.14 16.54 0.00 2.17
6678 10250 6.582295 GTCTGAAAATGTACGTGCATGATTTT 59.418 34.615 20.14 16.51 0.00 1.82
6679 10251 7.114811 GTCTGAAAATGTACGTGCATGATTTTT 59.885 33.333 20.14 16.17 0.00 1.94
6703 10275 9.889128 TTTTTGGTGTATAGGTTATACTGTACC 57.111 33.333 7.52 7.26 41.21 3.34
6704 10276 8.606754 TTTGGTGTATAGGTTATACTGTACCA 57.393 34.615 10.49 10.49 40.51 3.25
6705 10277 8.606754 TTGGTGTATAGGTTATACTGTACCAA 57.393 34.615 17.17 17.17 44.38 3.67
6706 10278 8.241497 TGGTGTATAGGTTATACTGTACCAAG 57.759 38.462 11.48 0.00 39.89 3.61
6707 10279 8.060689 TGGTGTATAGGTTATACTGTACCAAGA 58.939 37.037 11.48 0.00 39.89 3.02
6708 10280 8.917088 GGTGTATAGGTTATACTGTACCAAGAA 58.083 37.037 1.40 0.00 41.21 2.52
6722 10294 9.793259 ACTGTACCAAGAATTCTTAAATGAGAA 57.207 29.630 20.07 1.97 39.76 2.87
6743 10315 8.502387 TGAGAATTTTGTTTGTCTTTGTTTTGG 58.498 29.630 0.00 0.00 0.00 3.28
6744 10316 8.389779 AGAATTTTGTTTGTCTTTGTTTTGGT 57.610 26.923 0.00 0.00 0.00 3.67
6745 10317 8.503196 AGAATTTTGTTTGTCTTTGTTTTGGTC 58.497 29.630 0.00 0.00 0.00 4.02
6746 10318 7.977789 ATTTTGTTTGTCTTTGTTTTGGTCT 57.022 28.000 0.00 0.00 0.00 3.85
6747 10319 9.495572 AATTTTGTTTGTCTTTGTTTTGGTCTA 57.504 25.926 0.00 0.00 0.00 2.59
6748 10320 8.888579 TTTTGTTTGTCTTTGTTTTGGTCTAA 57.111 26.923 0.00 0.00 0.00 2.10
6749 10321 8.527567 TTTGTTTGTCTTTGTTTTGGTCTAAG 57.472 30.769 0.00 0.00 0.00 2.18
6750 10322 7.455641 TGTTTGTCTTTGTTTTGGTCTAAGA 57.544 32.000 0.00 0.00 0.00 2.10
6751 10323 7.887381 TGTTTGTCTTTGTTTTGGTCTAAGAA 58.113 30.769 0.00 0.00 31.26 2.52
6752 10324 8.361139 TGTTTGTCTTTGTTTTGGTCTAAGAAA 58.639 29.630 0.00 0.00 31.26 2.52
6753 10325 9.366216 GTTTGTCTTTGTTTTGGTCTAAGAAAT 57.634 29.630 0.00 0.00 31.26 2.17
6754 10326 9.581099 TTTGTCTTTGTTTTGGTCTAAGAAATC 57.419 29.630 0.00 0.00 31.26 2.17
6755 10327 8.287439 TGTCTTTGTTTTGGTCTAAGAAATCA 57.713 30.769 0.00 0.00 31.26 2.57
6756 10328 8.744652 TGTCTTTGTTTTGGTCTAAGAAATCAA 58.255 29.630 0.00 0.00 31.26 2.57
6757 10329 9.581099 GTCTTTGTTTTGGTCTAAGAAATCAAA 57.419 29.630 0.00 0.00 33.19 2.69
6762 10334 9.748708 TGTTTTGGTCTAAGAAATCAAATGAAG 57.251 29.630 0.00 0.00 0.00 3.02
6763 10335 9.750125 GTTTTGGTCTAAGAAATCAAATGAAGT 57.250 29.630 0.00 0.00 0.00 3.01
6765 10337 9.965824 TTTGGTCTAAGAAATCAAATGAAGTTC 57.034 29.630 0.00 0.00 0.00 3.01
6766 10338 8.924511 TGGTCTAAGAAATCAAATGAAGTTCT 57.075 30.769 4.17 6.81 35.37 3.01
6767 10339 9.003658 TGGTCTAAGAAATCAAATGAAGTTCTC 57.996 33.333 4.17 0.00 33.82 2.87
6768 10340 9.225436 GGTCTAAGAAATCAAATGAAGTTCTCT 57.775 33.333 4.17 0.00 33.82 3.10
6773 10345 8.455903 AGAAATCAAATGAAGTTCTCTTGTCA 57.544 30.769 4.17 0.00 31.05 3.58
6774 10346 9.075678 AGAAATCAAATGAAGTTCTCTTGTCAT 57.924 29.630 4.17 0.00 31.05 3.06
6775 10347 9.125906 GAAATCAAATGAAGTTCTCTTGTCATG 57.874 33.333 4.17 0.00 33.64 3.07
6776 10348 7.756395 ATCAAATGAAGTTCTCTTGTCATGT 57.244 32.000 4.17 0.00 33.64 3.21
6777 10349 6.962686 TCAAATGAAGTTCTCTTGTCATGTG 58.037 36.000 4.17 0.00 33.64 3.21
6778 10350 5.954296 AATGAAGTTCTCTTGTCATGTGG 57.046 39.130 4.17 0.00 33.64 4.17
6779 10351 3.141398 TGAAGTTCTCTTGTCATGTGGC 58.859 45.455 4.17 0.00 33.64 5.01
6780 10352 2.936919 AGTTCTCTTGTCATGTGGCA 57.063 45.000 0.00 0.00 0.00 4.92
6781 10353 2.498167 AGTTCTCTTGTCATGTGGCAC 58.502 47.619 11.55 11.55 0.00 5.01
6782 10354 2.105477 AGTTCTCTTGTCATGTGGCACT 59.895 45.455 19.83 1.19 0.00 4.40
6783 10355 2.174363 TCTCTTGTCATGTGGCACTG 57.826 50.000 19.83 14.06 0.00 3.66
6784 10356 1.162698 CTCTTGTCATGTGGCACTGG 58.837 55.000 19.83 10.81 0.00 4.00
6785 10357 0.473755 TCTTGTCATGTGGCACTGGT 59.526 50.000 19.83 1.93 0.00 4.00
6786 10358 1.696884 TCTTGTCATGTGGCACTGGTA 59.303 47.619 19.83 0.00 0.00 3.25
6787 10359 2.305635 TCTTGTCATGTGGCACTGGTAT 59.694 45.455 19.83 0.17 0.00 2.73
6788 10360 2.877097 TGTCATGTGGCACTGGTATT 57.123 45.000 19.83 0.00 0.00 1.89
6789 10361 2.435422 TGTCATGTGGCACTGGTATTG 58.565 47.619 19.83 6.99 0.00 1.90
6790 10362 1.133025 GTCATGTGGCACTGGTATTGC 59.867 52.381 19.83 0.00 39.41 3.56
6791 10363 1.004628 TCATGTGGCACTGGTATTGCT 59.995 47.619 19.83 0.00 40.07 3.91
6792 10364 1.820519 CATGTGGCACTGGTATTGCTT 59.179 47.619 19.83 0.00 40.07 3.91
6793 10365 1.993956 TGTGGCACTGGTATTGCTTT 58.006 45.000 19.83 0.00 40.07 3.51
6794 10366 2.315176 TGTGGCACTGGTATTGCTTTT 58.685 42.857 19.83 0.00 40.07 2.27
6795 10367 2.295909 TGTGGCACTGGTATTGCTTTTC 59.704 45.455 19.83 0.00 40.07 2.29
6796 10368 2.558359 GTGGCACTGGTATTGCTTTTCT 59.442 45.455 11.13 0.00 40.07 2.52
6797 10369 3.756434 GTGGCACTGGTATTGCTTTTCTA 59.244 43.478 11.13 0.00 40.07 2.10
6798 10370 4.217550 GTGGCACTGGTATTGCTTTTCTAA 59.782 41.667 11.13 0.00 40.07 2.10
6799 10371 4.217550 TGGCACTGGTATTGCTTTTCTAAC 59.782 41.667 0.00 0.00 40.07 2.34
6800 10372 4.459337 GGCACTGGTATTGCTTTTCTAACT 59.541 41.667 0.00 0.00 40.07 2.24
6801 10373 5.646360 GGCACTGGTATTGCTTTTCTAACTA 59.354 40.000 0.00 0.00 40.07 2.24
6802 10374 6.403309 GGCACTGGTATTGCTTTTCTAACTAC 60.403 42.308 0.00 0.00 40.07 2.73
6803 10375 6.371825 GCACTGGTATTGCTTTTCTAACTACT 59.628 38.462 0.00 0.00 37.00 2.57
6804 10376 7.094762 GCACTGGTATTGCTTTTCTAACTACTT 60.095 37.037 0.00 0.00 37.00 2.24
6805 10377 8.784043 CACTGGTATTGCTTTTCTAACTACTTT 58.216 33.333 0.00 0.00 0.00 2.66
6914 10486 6.976934 TTTTTAAGCCCTTCTGACTGAAAT 57.023 33.333 0.00 0.00 33.79 2.17
6986 10558 6.774170 TCAATGCTTATAGGTCAATGCTTCAT 59.226 34.615 0.00 0.00 0.00 2.57
7180 10753 8.414003 TCTAGTGATAGCTTTTGAATATCGTGT 58.586 33.333 0.00 0.00 0.00 4.49
7242 10815 1.600413 GCGACCTGTGGCTTTTGAAAG 60.600 52.381 0.00 0.00 39.03 2.62
7252 10825 6.410540 TGTGGCTTTTGAAAGGTTTTGTAAT 58.589 32.000 5.70 0.00 36.53 1.89
7602 11175 8.116026 TGATGCCAGGAGTGATATAGTATAAGA 58.884 37.037 0.00 0.00 0.00 2.10
7640 11213 1.607178 CAGCATGCCACTTCCCCAA 60.607 57.895 15.66 0.00 0.00 4.12
7683 11256 4.038642 GTCTTATAGAACTCCTGGGAGCAG 59.961 50.000 15.78 0.00 45.54 4.24
7752 11327 2.652941 ACATAATTTTGGCTGTGGCG 57.347 45.000 0.89 0.00 39.81 5.69
7762 11337 1.861440 GCTGTGGCGCCAAATTTTG 59.139 52.632 34.66 15.62 0.00 2.44
7911 11506 0.392706 CTTTTCCCTGTTGGTTGGGC 59.607 55.000 0.00 0.00 43.04 5.36
8001 11623 3.343941 TGCTACCAACCGAAAGCTTAT 57.656 42.857 0.00 0.00 35.95 1.73
8002 11624 3.681593 TGCTACCAACCGAAAGCTTATT 58.318 40.909 0.00 0.00 35.95 1.40
8003 11625 3.438781 TGCTACCAACCGAAAGCTTATTG 59.561 43.478 0.00 2.62 35.95 1.90
8004 11626 3.687698 GCTACCAACCGAAAGCTTATTGA 59.312 43.478 0.00 0.00 32.18 2.57
8005 11627 4.335594 GCTACCAACCGAAAGCTTATTGAT 59.664 41.667 0.00 0.00 32.18 2.57
8006 11628 4.965119 ACCAACCGAAAGCTTATTGATC 57.035 40.909 0.00 0.00 0.00 2.92
8008 11630 4.396166 ACCAACCGAAAGCTTATTGATCTG 59.604 41.667 0.00 0.00 0.00 2.90
8016 11749 6.456988 CGAAAGCTTATTGATCTGGTACAACC 60.457 42.308 0.00 0.00 38.70 3.77
8062 11795 5.124645 AGATTTTTGGCAAATGCTGTTTGA 58.875 33.333 14.29 0.00 41.70 2.69
8106 11839 6.152661 TCAATCCTATTTGTGGTTTTGCTAGG 59.847 38.462 0.00 0.00 0.00 3.02
8110 11843 3.726291 TTTGTGGTTTTGCTAGGCTTC 57.274 42.857 0.00 0.00 0.00 3.86
8121 11854 2.837591 TGCTAGGCTTCTGTTGATGGTA 59.162 45.455 0.00 0.00 0.00 3.25
8157 11892 3.285484 AGCATCCAATGGTCACTCAATC 58.715 45.455 0.00 0.00 35.90 2.67
8158 11893 3.053842 AGCATCCAATGGTCACTCAATCT 60.054 43.478 0.00 0.00 35.90 2.40
8160 11895 4.883585 GCATCCAATGGTCACTCAATCTTA 59.116 41.667 0.00 0.00 0.00 2.10
8162 11897 6.293845 GCATCCAATGGTCACTCAATCTTATC 60.294 42.308 0.00 0.00 0.00 1.75
8262 12008 2.763448 GCTGAGGATAGACTGTGGACTT 59.237 50.000 0.00 0.00 0.00 3.01
8263 12009 3.430098 GCTGAGGATAGACTGTGGACTTG 60.430 52.174 0.00 0.00 0.00 3.16
8267 12013 5.485353 TGAGGATAGACTGTGGACTTGAAAT 59.515 40.000 0.00 0.00 0.00 2.17
8275 12021 4.697352 ACTGTGGACTTGAAATGCAGATAC 59.303 41.667 0.00 0.00 0.00 2.24
8292 12039 2.734755 TACAATGGATTGCCCCTCTG 57.265 50.000 0.00 0.00 41.38 3.35
8298 12045 3.344535 TGGATTGCCCCTCTGATACTA 57.655 47.619 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.200092 GCTTCGGGGATTAGAATTTGTCT 58.800 43.478 0.00 0.00 40.71 3.41
1 2 3.945285 TGCTTCGGGGATTAGAATTTGTC 59.055 43.478 0.00 0.00 0.00 3.18
3 4 4.640201 TCTTGCTTCGGGGATTAGAATTTG 59.360 41.667 0.00 0.00 0.00 2.32
4 5 4.855340 TCTTGCTTCGGGGATTAGAATTT 58.145 39.130 0.00 0.00 0.00 1.82
5 6 4.503714 TCTTGCTTCGGGGATTAGAATT 57.496 40.909 0.00 0.00 0.00 2.17
6 7 4.503714 TTCTTGCTTCGGGGATTAGAAT 57.496 40.909 0.00 0.00 0.00 2.40
7 8 3.992943 TTCTTGCTTCGGGGATTAGAA 57.007 42.857 0.00 0.00 0.00 2.10
8 9 3.008594 TGTTTCTTGCTTCGGGGATTAGA 59.991 43.478 0.00 0.00 0.00 2.10
9 10 3.343617 TGTTTCTTGCTTCGGGGATTAG 58.656 45.455 0.00 0.00 0.00 1.73
10 11 3.426787 TGTTTCTTGCTTCGGGGATTA 57.573 42.857 0.00 0.00 0.00 1.75
11 12 2.286365 TGTTTCTTGCTTCGGGGATT 57.714 45.000 0.00 0.00 0.00 3.01
12 13 2.514458 ATGTTTCTTGCTTCGGGGAT 57.486 45.000 0.00 0.00 0.00 3.85
13 14 3.426787 TTATGTTTCTTGCTTCGGGGA 57.573 42.857 0.00 0.00 0.00 4.81
14 15 4.513198 TTTTATGTTTCTTGCTTCGGGG 57.487 40.909 0.00 0.00 0.00 5.73
33 34 5.928264 GCTTCTTGCACCTATGTGAATTTTT 59.072 36.000 1.92 0.00 45.76 1.94
34 35 5.473039 GCTTCTTGCACCTATGTGAATTTT 58.527 37.500 1.92 0.00 45.76 1.82
35 36 5.064441 GCTTCTTGCACCTATGTGAATTT 57.936 39.130 1.92 0.00 45.76 1.82
36 37 4.708726 GCTTCTTGCACCTATGTGAATT 57.291 40.909 1.92 0.00 45.76 2.17
49 50 1.610522 TCTTTCCTTGCTGCTTCTTGC 59.389 47.619 0.00 0.00 43.25 4.01
50 51 5.450137 CCATATCTTTCCTTGCTGCTTCTTG 60.450 44.000 0.00 0.00 0.00 3.02
51 52 4.643784 CCATATCTTTCCTTGCTGCTTCTT 59.356 41.667 0.00 0.00 0.00 2.52
52 53 4.080129 TCCATATCTTTCCTTGCTGCTTCT 60.080 41.667 0.00 0.00 0.00 2.85
53 54 4.202441 TCCATATCTTTCCTTGCTGCTTC 58.798 43.478 0.00 0.00 0.00 3.86
54 55 4.080129 TCTCCATATCTTTCCTTGCTGCTT 60.080 41.667 0.00 0.00 0.00 3.91
55 56 3.457380 TCTCCATATCTTTCCTTGCTGCT 59.543 43.478 0.00 0.00 0.00 4.24
56 57 3.813443 TCTCCATATCTTTCCTTGCTGC 58.187 45.455 0.00 0.00 0.00 5.25
57 58 5.070180 TCTCTCTCCATATCTTTCCTTGCTG 59.930 44.000 0.00 0.00 0.00 4.41
58 59 5.215069 TCTCTCTCCATATCTTTCCTTGCT 58.785 41.667 0.00 0.00 0.00 3.91
59 60 5.540911 CTCTCTCTCCATATCTTTCCTTGC 58.459 45.833 0.00 0.00 0.00 4.01
60 61 5.070180 TGCTCTCTCTCCATATCTTTCCTTG 59.930 44.000 0.00 0.00 0.00 3.61
61 62 5.215069 TGCTCTCTCTCCATATCTTTCCTT 58.785 41.667 0.00 0.00 0.00 3.36
62 63 4.813809 TGCTCTCTCTCCATATCTTTCCT 58.186 43.478 0.00 0.00 0.00 3.36
63 64 5.743636 ATGCTCTCTCTCCATATCTTTCC 57.256 43.478 0.00 0.00 0.00 3.13
64 65 6.427547 CCAAATGCTCTCTCTCCATATCTTTC 59.572 42.308 0.00 0.00 0.00 2.62
65 66 6.100859 TCCAAATGCTCTCTCTCCATATCTTT 59.899 38.462 0.00 0.00 0.00 2.52
66 67 5.605908 TCCAAATGCTCTCTCTCCATATCTT 59.394 40.000 0.00 0.00 0.00 2.40
67 68 5.153675 TCCAAATGCTCTCTCTCCATATCT 58.846 41.667 0.00 0.00 0.00 1.98
68 69 5.011943 ACTCCAAATGCTCTCTCTCCATATC 59.988 44.000 0.00 0.00 0.00 1.63
69 70 4.906664 ACTCCAAATGCTCTCTCTCCATAT 59.093 41.667 0.00 0.00 0.00 1.78
70 71 4.100653 CACTCCAAATGCTCTCTCTCCATA 59.899 45.833 0.00 0.00 0.00 2.74
71 72 3.113824 ACTCCAAATGCTCTCTCTCCAT 58.886 45.455 0.00 0.00 0.00 3.41
72 73 2.235650 CACTCCAAATGCTCTCTCTCCA 59.764 50.000 0.00 0.00 0.00 3.86
73 74 2.235898 ACACTCCAAATGCTCTCTCTCC 59.764 50.000 0.00 0.00 0.00 3.71
74 75 3.260740 CACACTCCAAATGCTCTCTCTC 58.739 50.000 0.00 0.00 0.00 3.20
75 76 2.636893 ACACACTCCAAATGCTCTCTCT 59.363 45.455 0.00 0.00 0.00 3.10
76 77 2.740981 CACACACTCCAAATGCTCTCTC 59.259 50.000 0.00 0.00 0.00 3.20
77 78 2.369860 TCACACACTCCAAATGCTCTCT 59.630 45.455 0.00 0.00 0.00 3.10
78 79 2.771089 TCACACACTCCAAATGCTCTC 58.229 47.619 0.00 0.00 0.00 3.20
79 80 2.936919 TCACACACTCCAAATGCTCT 57.063 45.000 0.00 0.00 0.00 4.09
80 81 3.755378 AGAATCACACACTCCAAATGCTC 59.245 43.478 0.00 0.00 0.00 4.26
81 82 3.759581 AGAATCACACACTCCAAATGCT 58.240 40.909 0.00 0.00 0.00 3.79
82 83 5.824904 ATAGAATCACACACTCCAAATGC 57.175 39.130 0.00 0.00 0.00 3.56
83 84 7.848223 TGTATAGAATCACACACTCCAAATG 57.152 36.000 0.00 0.00 0.00 2.32
86 87 9.546428 CATATTGTATAGAATCACACACTCCAA 57.454 33.333 0.00 0.00 0.00 3.53
87 88 8.923270 TCATATTGTATAGAATCACACACTCCA 58.077 33.333 0.00 0.00 0.00 3.86
88 89 9.935241 ATCATATTGTATAGAATCACACACTCC 57.065 33.333 0.00 0.00 0.00 3.85
145 146 7.566760 TGTGCCAATATTTTCATACTCGATT 57.433 32.000 0.00 0.00 0.00 3.34
171 172 0.884704 GTCTTTGTGAGGCCTTGCGA 60.885 55.000 6.77 0.00 0.00 5.10
289 290 0.531532 ACATGCCATCGTCAGCTAGC 60.532 55.000 6.62 6.62 0.00 3.42
297 298 6.942532 AAAGAAATATACACATGCCATCGT 57.057 33.333 0.00 0.00 0.00 3.73
511 516 6.593268 ATTCAACATTTCATCACCACATGA 57.407 33.333 0.00 0.00 43.13 3.07
625 631 2.742589 GGACTTGAACTCCGGTTGATTC 59.257 50.000 0.00 2.07 35.58 2.52
649 655 0.593128 GCGAGCACCAATGTCAAGTT 59.407 50.000 0.00 0.00 0.00 2.66
661 667 2.927553 ATCCAAGAAAATGCGAGCAC 57.072 45.000 0.00 0.00 0.00 4.40
674 680 6.758416 GCTTGAAGGCCTAAAATAAATCCAAG 59.242 38.462 5.16 8.08 0.00 3.61
696 702 2.234661 TCTCACTGAATCCACATCGCTT 59.765 45.455 0.00 0.00 0.00 4.68
697 703 1.827344 TCTCACTGAATCCACATCGCT 59.173 47.619 0.00 0.00 0.00 4.93
706 712 3.859411 AACGTCTCCTCTCACTGAATC 57.141 47.619 0.00 0.00 0.00 2.52
707 713 3.829601 AGAAACGTCTCCTCTCACTGAAT 59.170 43.478 0.00 0.00 0.00 2.57
737 743 1.082038 CGAAGTCGTCGCAGTCTGT 60.082 57.895 0.93 0.00 44.14 3.41
738 744 3.742353 CGAAGTCGTCGCAGTCTG 58.258 61.111 0.00 0.00 44.14 3.51
748 754 6.035005 ACATCATGTTGAGATTAACGAAGTCG 59.965 38.462 10.74 0.00 45.00 4.18
749 755 7.063426 TCACATCATGTTGAGATTAACGAAGTC 59.937 37.037 10.74 0.00 45.00 3.01
750 756 7.063898 CTCACATCATGTTGAGATTAACGAAGT 59.936 37.037 10.74 0.00 33.74 3.01
763 769 5.443185 AACTCAAACCTCACATCATGTTG 57.557 39.130 2.12 2.12 0.00 3.33
766 772 5.390251 CGAGAAACTCAAACCTCACATCATG 60.390 44.000 0.00 0.00 0.00 3.07
775 781 3.134081 TCACTTCCGAGAAACTCAAACCT 59.866 43.478 0.00 0.00 0.00 3.50
776 782 3.463944 TCACTTCCGAGAAACTCAAACC 58.536 45.455 0.00 0.00 0.00 3.27
778 784 4.956085 TGATCACTTCCGAGAAACTCAAA 58.044 39.130 0.00 0.00 0.00 2.69
785 791 4.537751 ACTCCTATGATCACTTCCGAGAA 58.462 43.478 0.00 0.00 0.00 2.87
789 795 4.216687 GTCCTACTCCTATGATCACTTCCG 59.783 50.000 0.00 0.00 0.00 4.30
791 797 4.822896 ACGTCCTACTCCTATGATCACTTC 59.177 45.833 0.00 0.00 0.00 3.01
793 799 4.138290 CACGTCCTACTCCTATGATCACT 58.862 47.826 0.00 0.00 0.00 3.41
797 803 1.880675 CGCACGTCCTACTCCTATGAT 59.119 52.381 0.00 0.00 0.00 2.45
805 811 0.528924 TATTGCACGCACGTCCTACT 59.471 50.000 0.00 0.00 0.00 2.57
812 818 8.948946 TGTTAATTAATTTATATTGCACGCACG 58.051 29.630 5.91 0.00 0.00 5.34
824 830 9.797556 GAGGAAGGCGTTTGTTAATTAATTTAT 57.202 29.630 5.91 0.00 0.00 1.40
837 2436 5.371115 TTTTTATGAGAGGAAGGCGTTTG 57.629 39.130 0.00 0.00 0.00 2.93
932 2540 2.681778 CTCGGTCTGTCCCTGCCT 60.682 66.667 0.00 0.00 0.00 4.75
950 2558 1.186267 AAGAGGGTTTCGAGCTCGGT 61.186 55.000 33.98 13.15 40.29 4.69
951 2559 0.458716 GAAGAGGGTTTCGAGCTCGG 60.459 60.000 33.98 16.82 40.29 4.63
952 2560 0.458716 GGAAGAGGGTTTCGAGCTCG 60.459 60.000 30.03 30.03 41.45 5.03
953 2561 0.458716 CGGAAGAGGGTTTCGAGCTC 60.459 60.000 2.73 2.73 0.00 4.09
954 2562 1.592223 CGGAAGAGGGTTTCGAGCT 59.408 57.895 0.00 0.00 0.00 4.09
955 2563 2.101233 GCGGAAGAGGGTTTCGAGC 61.101 63.158 0.00 0.00 0.00 5.03
974 2582 2.861472 TGGGGTTTAGGCAGGGCA 60.861 61.111 0.00 0.00 0.00 5.36
1397 3008 2.927477 GTGAAATCGACGTAGGCATTGA 59.073 45.455 0.00 0.00 0.00 2.57
1443 3054 3.266510 TCCAATCGAGAAGACAATGGG 57.733 47.619 0.00 0.00 33.60 4.00
1447 3058 4.551702 TTGGATCCAATCGAGAAGACAA 57.448 40.909 23.63 0.00 0.00 3.18
1599 3217 6.377327 ACTTCAGTGTCACAATTTAACCAG 57.623 37.500 5.62 0.00 0.00 4.00
1614 3232 7.962964 TTCCTTATCAGTACAAACTTCAGTG 57.037 36.000 0.00 0.00 31.97 3.66
1646 3264 4.167892 TCCATATGCTTACAAAGTCCCCAT 59.832 41.667 0.00 0.00 0.00 4.00
1667 3285 4.020485 ACAACCTTACACCTAGTCACATCC 60.020 45.833 0.00 0.00 0.00 3.51
1748 3367 5.123820 GTCTAAATGGCAGCAGAACACATAA 59.876 40.000 0.00 0.00 0.00 1.90
1836 3455 4.849518 TCATTTGGGGAAATCATCACGTA 58.150 39.130 0.00 0.00 29.39 3.57
1855 3474 5.537300 AGACTATCCGCAACATAGTTCAT 57.463 39.130 1.79 0.00 37.22 2.57
1970 3889 8.293867 TGAAATAAACAGTGCAACAGGTATAAC 58.706 33.333 0.00 0.00 41.43 1.89
2043 3962 7.055667 TCTCAGATCCTACATGTCCAATAAC 57.944 40.000 0.00 0.00 0.00 1.89
2091 4010 3.576648 GTTCTCAACTAACACCCGAGAG 58.423 50.000 0.00 0.00 34.42 3.20
2327 4246 7.049754 TGTAACATGACATCACAGAAGCATAT 58.950 34.615 0.00 0.00 0.00 1.78
2331 4250 4.692625 ACTGTAACATGACATCACAGAAGC 59.307 41.667 20.41 0.00 39.13 3.86
2465 4384 3.873361 CACGAATGAATAGTGTGATGGCT 59.127 43.478 0.00 0.00 32.39 4.75
2484 4403 7.537306 CACAAATGAAATAACTAAGGGAACACG 59.463 37.037 0.00 0.00 0.00 4.49
2490 4409 7.178451 AGGGAACACAAATGAAATAACTAAGGG 59.822 37.037 0.00 0.00 0.00 3.95
2658 4578 8.684386 TCTACAGATAAGTAACCTGATCTCAG 57.316 38.462 0.00 0.00 36.85 3.35
2695 4615 4.559153 CTTTTGTAAATGGTCTTGCTGGG 58.441 43.478 0.00 0.00 0.00 4.45
2756 4678 5.181811 TGCACCACTATCAAATCAGAGTTTG 59.818 40.000 0.00 0.00 39.78 2.93
2765 4687 2.493278 GCCTTGTGCACCACTATCAAAT 59.507 45.455 15.69 0.00 40.77 2.32
2819 4741 1.470890 TCGATCCCGTTTTGAAATGGC 59.529 47.619 8.85 0.00 42.50 4.40
2824 4746 3.947910 AGTACTCGATCCCGTTTTGAA 57.052 42.857 0.00 0.00 37.05 2.69
2826 4748 2.093783 GCAAGTACTCGATCCCGTTTTG 59.906 50.000 0.00 0.00 37.05 2.44
2831 4753 3.644884 ATAAGCAAGTACTCGATCCCG 57.355 47.619 0.00 0.00 37.07 5.14
2958 4881 4.028131 GGGTTCCGGGGAGATAAATTTTT 58.972 43.478 0.00 0.00 0.00 1.94
2963 4886 1.493022 CATGGGTTCCGGGGAGATAAA 59.507 52.381 0.00 0.00 0.00 1.40
3008 4931 8.615211 GTCTTGATAATGATAATGTGCAGTCAA 58.385 33.333 0.00 0.00 0.00 3.18
3097 5020 5.934781 AGAAGATTAGGGCCAGTTCATAAG 58.065 41.667 6.18 0.00 0.00 1.73
3329 5252 0.752054 CTGCAAAACCTTTCCAGCCA 59.248 50.000 0.00 0.00 0.00 4.75
3521 5447 4.220693 TGACTTATGCTGCATTAGGTGT 57.779 40.909 26.49 15.85 0.00 4.16
3547 5473 0.950836 CACCGACCAATGCAAAGTGA 59.049 50.000 0.00 0.00 0.00 3.41
3693 5863 5.682943 TGTTGTTGTAGTAAAGCATGACC 57.317 39.130 0.00 0.00 0.00 4.02
3726 5896 6.071840 AGGCTTAGTTGTTGTTGTTGTTGTTA 60.072 34.615 0.00 0.00 0.00 2.41
3727 5897 4.926832 GGCTTAGTTGTTGTTGTTGTTGTT 59.073 37.500 0.00 0.00 0.00 2.83
3728 5898 4.219725 AGGCTTAGTTGTTGTTGTTGTTGT 59.780 37.500 0.00 0.00 0.00 3.32
3729 5899 4.743493 AGGCTTAGTTGTTGTTGTTGTTG 58.257 39.130 0.00 0.00 0.00 3.33
3730 5900 5.400066 AAGGCTTAGTTGTTGTTGTTGTT 57.600 34.783 0.00 0.00 0.00 2.83
3731 5901 5.400066 AAAGGCTTAGTTGTTGTTGTTGT 57.600 34.783 0.00 0.00 0.00 3.32
3732 5902 6.560711 ACTAAAGGCTTAGTTGTTGTTGTTG 58.439 36.000 0.00 0.00 44.41 3.33
3733 5903 6.183360 GGACTAAAGGCTTAGTTGTTGTTGTT 60.183 38.462 0.00 0.00 46.31 2.83
3734 5904 5.298527 GGACTAAAGGCTTAGTTGTTGTTGT 59.701 40.000 0.00 0.00 46.31 3.32
3735 5905 5.278315 GGGACTAAAGGCTTAGTTGTTGTTG 60.278 44.000 0.00 0.00 46.31 3.33
3736 5906 4.825634 GGGACTAAAGGCTTAGTTGTTGTT 59.174 41.667 0.00 0.00 46.31 2.83
3737 5907 4.141344 TGGGACTAAAGGCTTAGTTGTTGT 60.141 41.667 0.00 0.00 46.31 3.32
3738 5908 4.394729 TGGGACTAAAGGCTTAGTTGTTG 58.605 43.478 0.00 0.00 46.31 3.33
3739 5909 4.717279 TGGGACTAAAGGCTTAGTTGTT 57.283 40.909 0.00 0.00 46.31 2.83
3740 5910 4.717279 TTGGGACTAAAGGCTTAGTTGT 57.283 40.909 0.00 0.00 46.31 3.32
3798 5968 6.317312 ACATTGCCAATAGATACCATCCAAT 58.683 36.000 0.00 0.00 0.00 3.16
3807 6150 4.167892 ACCCTGGAACATTGCCAATAGATA 59.832 41.667 0.00 0.00 38.20 1.98
3816 6159 1.290009 GCACACCCTGGAACATTGC 59.710 57.895 0.00 0.00 38.20 3.56
3872 6215 7.716560 GGGGAAAAACACTTTGTAGTAGTCTTA 59.283 37.037 0.00 0.00 31.96 2.10
3875 6218 6.017357 CAGGGGAAAAACACTTTGTAGTAGTC 60.017 42.308 0.00 0.00 31.96 2.59
3889 6232 2.375014 TTCAGGGTCAGGGGAAAAAC 57.625 50.000 0.00 0.00 0.00 2.43
3894 6237 1.455822 ACAATTTCAGGGTCAGGGGA 58.544 50.000 0.00 0.00 0.00 4.81
3896 6239 3.954258 GGATTACAATTTCAGGGTCAGGG 59.046 47.826 0.00 0.00 0.00 4.45
3897 6240 4.641989 CAGGATTACAATTTCAGGGTCAGG 59.358 45.833 0.00 0.00 0.00 3.86
3898 6241 5.256474 ACAGGATTACAATTTCAGGGTCAG 58.744 41.667 0.00 0.00 0.00 3.51
3899 6242 5.255397 ACAGGATTACAATTTCAGGGTCA 57.745 39.130 0.00 0.00 0.00 4.02
3900 6243 8.837389 GTTATACAGGATTACAATTTCAGGGTC 58.163 37.037 0.00 0.00 0.00 4.46
3901 6244 8.557450 AGTTATACAGGATTACAATTTCAGGGT 58.443 33.333 0.00 0.00 0.00 4.34
3998 6631 1.604593 GTTGCATGCTGAGGTGGGT 60.605 57.895 20.33 0.00 0.00 4.51
4088 6721 7.454260 AGGGAGTATGAAATGAACTGAAAAC 57.546 36.000 0.00 0.00 0.00 2.43
4100 6733 7.406620 AATATGGATCCAAGGGAGTATGAAA 57.593 36.000 20.67 0.00 34.05 2.69
4139 6774 5.691754 CGTATTTCAGTGCTAGATACATGCA 59.308 40.000 0.00 0.00 0.00 3.96
4183 6818 2.363038 TCCGGTCCATATTACTTGTCGG 59.637 50.000 0.00 0.00 36.70 4.79
4200 6835 8.730680 CATTTGAAATAATAATACTCCCTCCGG 58.269 37.037 0.00 0.00 0.00 5.14
4251 6896 7.113965 CAGGAATTGCTTGCAATATATTTCGAC 59.886 37.037 19.35 4.66 0.00 4.20
4278 6923 2.112815 GGTACCCCATGCGTTGCTC 61.113 63.158 0.00 0.00 0.00 4.26
4295 6940 1.041437 GGAACGGAGGGAGTAGATGG 58.959 60.000 0.00 0.00 0.00 3.51
4433 7078 6.040616 TCCCTCCGTTTCTCAATATAAGTCTC 59.959 42.308 0.00 0.00 0.00 3.36
4445 7090 5.595257 AATAACTACTCCCTCCGTTTCTC 57.405 43.478 0.00 0.00 0.00 2.87
4452 7097 8.931568 TCACCTAATTAAATAACTACTCCCTCC 58.068 37.037 0.00 0.00 0.00 4.30
4529 7178 3.574396 CCAGCCAGCTAGTTATAGTAGCA 59.426 47.826 14.13 0.00 46.83 3.49
4641 7290 2.091111 CCCAGGGGAATAGGCTCAAAAT 60.091 50.000 0.00 0.00 37.50 1.82
4783 7432 5.873164 TGATAGCTCCTTTCTTAAACGAACC 59.127 40.000 0.00 0.00 0.00 3.62
4965 7650 1.982938 GGCTCCTGGTACTCGGTGT 60.983 63.158 0.00 0.00 0.00 4.16
5014 7699 1.144969 CCGTTGTAAGCTCTTTCGCA 58.855 50.000 0.00 0.00 0.00 5.10
5086 7771 6.749923 ATTACAAGCAATTTCAGAGAGGAC 57.250 37.500 0.00 0.00 0.00 3.85
5241 8214 5.839621 TGTCGCTGAGTTAGTAGAACTTTT 58.160 37.500 0.00 0.00 0.00 2.27
5260 8233 7.875041 ACTCTCTCCAATCCATATTAATTGTCG 59.125 37.037 0.00 0.00 32.20 4.35
5339 8391 9.970395 TGAAACGAATGTATCTAACCGTATATT 57.030 29.630 0.00 0.00 0.00 1.28
5340 8392 9.622004 CTGAAACGAATGTATCTAACCGTATAT 57.378 33.333 0.00 0.00 0.00 0.86
5341 8393 8.077991 CCTGAAACGAATGTATCTAACCGTATA 58.922 37.037 0.00 0.00 0.00 1.47
5342 8394 6.921857 CCTGAAACGAATGTATCTAACCGTAT 59.078 38.462 0.00 0.00 0.00 3.06
5344 8396 5.107133 CCTGAAACGAATGTATCTAACCGT 58.893 41.667 0.00 0.00 0.00 4.83
5345 8397 4.506654 CCCTGAAACGAATGTATCTAACCG 59.493 45.833 0.00 0.00 0.00 4.44
5346 8398 4.272748 GCCCTGAAACGAATGTATCTAACC 59.727 45.833 0.00 0.00 0.00 2.85
5347 8399 5.006746 CAGCCCTGAAACGAATGTATCTAAC 59.993 44.000 0.00 0.00 0.00 2.34
5348 8400 5.116180 CAGCCCTGAAACGAATGTATCTAA 58.884 41.667 0.00 0.00 0.00 2.10
5349 8401 4.161565 ACAGCCCTGAAACGAATGTATCTA 59.838 41.667 1.69 0.00 0.00 1.98
5350 8402 3.055094 ACAGCCCTGAAACGAATGTATCT 60.055 43.478 1.69 0.00 0.00 1.98
5351 8403 3.270877 ACAGCCCTGAAACGAATGTATC 58.729 45.455 1.69 0.00 0.00 2.24
5352 8404 3.055094 AGACAGCCCTGAAACGAATGTAT 60.055 43.478 1.69 0.00 0.00 2.29
5353 8405 2.301870 AGACAGCCCTGAAACGAATGTA 59.698 45.455 1.69 0.00 0.00 2.29
5354 8406 1.072331 AGACAGCCCTGAAACGAATGT 59.928 47.619 1.69 0.00 0.00 2.71
5355 8407 1.734465 GAGACAGCCCTGAAACGAATG 59.266 52.381 1.69 0.00 0.00 2.67
5356 8408 1.339151 GGAGACAGCCCTGAAACGAAT 60.339 52.381 1.69 0.00 0.00 3.34
5357 8409 0.034896 GGAGACAGCCCTGAAACGAA 59.965 55.000 1.69 0.00 0.00 3.85
5553 8633 4.451629 TGAGTTAGTCCACGGAATCTTC 57.548 45.455 0.00 0.00 0.00 2.87
5568 8648 7.309867 GGACAGAACTAGAACCAGATTGAGTTA 60.310 40.741 0.00 0.00 0.00 2.24
5582 8662 2.897969 GGTTGACAGGGACAGAACTAGA 59.102 50.000 0.00 0.00 0.00 2.43
5768 9004 3.070302 CCTTCCAATCCTCCACTACTAGC 59.930 52.174 0.00 0.00 0.00 3.42
5787 9023 2.194056 CATCTCCATGGCGCCCTT 59.806 61.111 26.77 8.91 0.00 3.95
5965 9227 4.321750 CCCTAAGAAAACGTACTGAGAGCA 60.322 45.833 0.00 0.00 0.00 4.26
5972 9234 3.501062 GCAAAGCCCTAAGAAAACGTACT 59.499 43.478 0.00 0.00 0.00 2.73
6022 9285 8.692710 CAGATTACCAGGTTTAGTATACTGACA 58.307 37.037 15.90 0.00 32.86 3.58
6080 9360 3.866582 CCTGTCGATGGAGGGGGC 61.867 72.222 1.68 0.00 0.00 5.80
6095 9375 1.078143 GCTCAAACGGATCAGCCCT 60.078 57.895 0.00 0.00 0.00 5.19
6096 9376 2.464459 CGCTCAAACGGATCAGCCC 61.464 63.158 0.00 0.00 0.00 5.19
6209 9489 6.858478 GTCAAACTTTCTATCTTTGACCAAGC 59.142 38.462 10.16 0.00 44.11 4.01
6279 9562 7.241042 ACAGTAGCATAACCAGAAAGAACTA 57.759 36.000 0.00 0.00 0.00 2.24
6280 9563 6.115448 ACAGTAGCATAACCAGAAAGAACT 57.885 37.500 0.00 0.00 0.00 3.01
6281 9564 7.900782 TTACAGTAGCATAACCAGAAAGAAC 57.099 36.000 0.00 0.00 0.00 3.01
6282 9565 8.911918 TTTTACAGTAGCATAACCAGAAAGAA 57.088 30.769 0.00 0.00 0.00 2.52
6315 9598 2.470057 ACCAGAAAAGGGAAAAGGCA 57.530 45.000 0.00 0.00 0.00 4.75
6346 9629 6.067217 ACAGAACAATCTAGGGCTGTAAAT 57.933 37.500 0.00 0.00 35.09 1.40
6482 9923 8.703604 TTCTCATTTAAGAATTCTCGGTACAG 57.296 34.615 8.78 2.12 30.38 2.74
6623 10195 9.546428 CCAAAGTTGGTGAAAGAAAAGATTTAT 57.454 29.630 1.63 0.00 43.43 1.40
6624 10196 8.940768 CCAAAGTTGGTGAAAGAAAAGATTTA 57.059 30.769 1.63 0.00 43.43 1.40
6625 10197 7.848223 CCAAAGTTGGTGAAAGAAAAGATTT 57.152 32.000 1.63 0.00 43.43 2.17
6641 10213 3.799281 TTTTCAGACCAGCCAAAGTTG 57.201 42.857 0.00 0.00 0.00 3.16
6642 10214 3.706086 ACATTTTCAGACCAGCCAAAGTT 59.294 39.130 0.00 0.00 0.00 2.66
6643 10215 3.299503 ACATTTTCAGACCAGCCAAAGT 58.700 40.909 0.00 0.00 0.00 2.66
6644 10216 4.613622 CGTACATTTTCAGACCAGCCAAAG 60.614 45.833 0.00 0.00 0.00 2.77
6645 10217 3.252215 CGTACATTTTCAGACCAGCCAAA 59.748 43.478 0.00 0.00 0.00 3.28
6646 10218 2.811431 CGTACATTTTCAGACCAGCCAA 59.189 45.455 0.00 0.00 0.00 4.52
6647 10219 2.224426 ACGTACATTTTCAGACCAGCCA 60.224 45.455 0.00 0.00 0.00 4.75
6648 10220 2.159627 CACGTACATTTTCAGACCAGCC 59.840 50.000 0.00 0.00 0.00 4.85
6649 10221 2.412847 GCACGTACATTTTCAGACCAGC 60.413 50.000 0.00 0.00 0.00 4.85
6650 10222 2.805671 TGCACGTACATTTTCAGACCAG 59.194 45.455 0.00 0.00 0.00 4.00
6651 10223 2.839975 TGCACGTACATTTTCAGACCA 58.160 42.857 0.00 0.00 0.00 4.02
6652 10224 3.435327 TCATGCACGTACATTTTCAGACC 59.565 43.478 0.00 0.00 0.00 3.85
6653 10225 4.661993 TCATGCACGTACATTTTCAGAC 57.338 40.909 0.00 0.00 0.00 3.51
6654 10226 5.878332 AATCATGCACGTACATTTTCAGA 57.122 34.783 0.00 0.00 0.00 3.27
6655 10227 6.932901 AAAATCATGCACGTACATTTTCAG 57.067 33.333 0.00 0.00 0.00 3.02
6677 10249 9.889128 GGTACAGTATAACCTATACACCAAAAA 57.111 33.333 6.60 0.00 42.68 1.94
6678 10250 9.044646 TGGTACAGTATAACCTATACACCAAAA 57.955 33.333 10.07 0.00 39.89 2.44
6679 10251 8.606754 TGGTACAGTATAACCTATACACCAAA 57.393 34.615 10.07 0.00 39.89 3.28
6680 10252 8.606754 TTGGTACAGTATAACCTATACACCAA 57.393 34.615 16.03 16.03 44.38 3.67
6681 10253 8.060689 TCTTGGTACAGTATAACCTATACACCA 58.939 37.037 9.05 9.05 42.68 4.17
6682 10254 8.469309 TCTTGGTACAGTATAACCTATACACC 57.531 38.462 6.60 5.98 42.68 4.16
6696 10268 9.793259 TTCTCATTTAAGAATTCTTGGTACAGT 57.207 29.630 27.37 4.25 37.40 3.55
6717 10289 8.502387 CCAAAACAAAGACAAACAAAATTCTCA 58.498 29.630 0.00 0.00 0.00 3.27
6718 10290 8.503196 ACCAAAACAAAGACAAACAAAATTCTC 58.497 29.630 0.00 0.00 0.00 2.87
6719 10291 8.389779 ACCAAAACAAAGACAAACAAAATTCT 57.610 26.923 0.00 0.00 0.00 2.40
6720 10292 8.503196 AGACCAAAACAAAGACAAACAAAATTC 58.497 29.630 0.00 0.00 0.00 2.17
6721 10293 8.389779 AGACCAAAACAAAGACAAACAAAATT 57.610 26.923 0.00 0.00 0.00 1.82
6722 10294 7.977789 AGACCAAAACAAAGACAAACAAAAT 57.022 28.000 0.00 0.00 0.00 1.82
6723 10295 8.888579 TTAGACCAAAACAAAGACAAACAAAA 57.111 26.923 0.00 0.00 0.00 2.44
6724 10296 8.361139 TCTTAGACCAAAACAAAGACAAACAAA 58.639 29.630 0.00 0.00 0.00 2.83
6725 10297 7.887381 TCTTAGACCAAAACAAAGACAAACAA 58.113 30.769 0.00 0.00 0.00 2.83
6726 10298 7.455641 TCTTAGACCAAAACAAAGACAAACA 57.544 32.000 0.00 0.00 0.00 2.83
6727 10299 8.751302 TTTCTTAGACCAAAACAAAGACAAAC 57.249 30.769 0.00 0.00 0.00 2.93
6728 10300 9.581099 GATTTCTTAGACCAAAACAAAGACAAA 57.419 29.630 0.00 0.00 0.00 2.83
6729 10301 8.744652 TGATTTCTTAGACCAAAACAAAGACAA 58.255 29.630 0.00 0.00 0.00 3.18
6730 10302 8.287439 TGATTTCTTAGACCAAAACAAAGACA 57.713 30.769 0.00 0.00 0.00 3.41
6731 10303 9.581099 TTTGATTTCTTAGACCAAAACAAAGAC 57.419 29.630 0.00 0.00 32.49 3.01
6736 10308 9.748708 CTTCATTTGATTTCTTAGACCAAAACA 57.251 29.630 7.39 0.00 31.63 2.83
6737 10309 9.750125 ACTTCATTTGATTTCTTAGACCAAAAC 57.250 29.630 7.39 0.00 31.63 2.43
6739 10311 9.965824 GAACTTCATTTGATTTCTTAGACCAAA 57.034 29.630 6.24 6.24 0.00 3.28
6740 10312 9.354673 AGAACTTCATTTGATTTCTTAGACCAA 57.645 29.630 0.00 0.00 0.00 3.67
6741 10313 8.924511 AGAACTTCATTTGATTTCTTAGACCA 57.075 30.769 0.00 0.00 0.00 4.02
6742 10314 9.225436 AGAGAACTTCATTTGATTTCTTAGACC 57.775 33.333 6.46 0.00 31.03 3.85
6747 10319 8.906867 TGACAAGAGAACTTCATTTGATTTCTT 58.093 29.630 10.54 0.00 33.70 2.52
6748 10320 8.455903 TGACAAGAGAACTTCATTTGATTTCT 57.544 30.769 10.54 5.18 33.70 2.52
6749 10321 9.125906 CATGACAAGAGAACTTCATTTGATTTC 57.874 33.333 10.54 2.18 33.70 2.17
6750 10322 8.636213 ACATGACAAGAGAACTTCATTTGATTT 58.364 29.630 0.00 0.00 33.70 2.17
6751 10323 8.080417 CACATGACAAGAGAACTTCATTTGATT 58.920 33.333 0.00 0.00 33.70 2.57
6752 10324 7.309012 CCACATGACAAGAGAACTTCATTTGAT 60.309 37.037 0.00 0.00 33.70 2.57
6753 10325 6.016860 CCACATGACAAGAGAACTTCATTTGA 60.017 38.462 0.00 0.00 33.70 2.69
6754 10326 6.147581 CCACATGACAAGAGAACTTCATTTG 58.852 40.000 0.00 0.00 33.70 2.32
6755 10327 5.278660 GCCACATGACAAGAGAACTTCATTT 60.279 40.000 0.00 0.00 33.70 2.32
6756 10328 4.217118 GCCACATGACAAGAGAACTTCATT 59.783 41.667 0.00 0.00 33.70 2.57
6757 10329 3.755378 GCCACATGACAAGAGAACTTCAT 59.245 43.478 0.00 0.00 33.70 2.57
6758 10330 3.141398 GCCACATGACAAGAGAACTTCA 58.859 45.455 0.00 0.00 33.70 3.02
6759 10331 3.058639 GTGCCACATGACAAGAGAACTTC 60.059 47.826 0.00 0.00 33.70 3.01
6760 10332 2.880890 GTGCCACATGACAAGAGAACTT 59.119 45.455 0.00 0.00 36.73 2.66
6761 10333 2.105477 AGTGCCACATGACAAGAGAACT 59.895 45.455 0.00 0.00 0.00 3.01
6762 10334 2.225019 CAGTGCCACATGACAAGAGAAC 59.775 50.000 0.00 0.00 0.00 3.01
6763 10335 2.497138 CAGTGCCACATGACAAGAGAA 58.503 47.619 0.00 0.00 0.00 2.87
6764 10336 1.271001 CCAGTGCCACATGACAAGAGA 60.271 52.381 0.00 0.00 0.00 3.10
6765 10337 1.162698 CCAGTGCCACATGACAAGAG 58.837 55.000 0.00 0.00 0.00 2.85
6766 10338 0.473755 ACCAGTGCCACATGACAAGA 59.526 50.000 0.00 0.00 0.00 3.02
6767 10339 2.183478 TACCAGTGCCACATGACAAG 57.817 50.000 0.00 0.00 0.00 3.16
6768 10340 2.819019 CAATACCAGTGCCACATGACAA 59.181 45.455 0.00 0.00 0.00 3.18
6769 10341 2.435422 CAATACCAGTGCCACATGACA 58.565 47.619 0.00 0.00 0.00 3.58
6770 10342 1.133025 GCAATACCAGTGCCACATGAC 59.867 52.381 0.00 0.00 35.91 3.06
6771 10343 1.004628 AGCAATACCAGTGCCACATGA 59.995 47.619 0.00 0.00 43.27 3.07
6772 10344 1.466856 AGCAATACCAGTGCCACATG 58.533 50.000 0.00 0.00 43.27 3.21
6773 10345 2.220653 AAGCAATACCAGTGCCACAT 57.779 45.000 0.00 0.00 43.27 3.21
6774 10346 1.993956 AAAGCAATACCAGTGCCACA 58.006 45.000 0.00 0.00 43.27 4.17
6775 10347 2.558359 AGAAAAGCAATACCAGTGCCAC 59.442 45.455 0.00 0.00 43.27 5.01
6776 10348 2.875296 AGAAAAGCAATACCAGTGCCA 58.125 42.857 0.00 0.00 43.27 4.92
6777 10349 4.459337 AGTTAGAAAAGCAATACCAGTGCC 59.541 41.667 0.00 0.00 43.27 5.01
6778 10350 5.629079 AGTTAGAAAAGCAATACCAGTGC 57.371 39.130 0.00 0.00 42.55 4.40
6779 10351 7.907214 AGTAGTTAGAAAAGCAATACCAGTG 57.093 36.000 0.00 0.00 0.00 3.66
6780 10352 8.919777 AAAGTAGTTAGAAAAGCAATACCAGT 57.080 30.769 0.00 0.00 0.00 4.00
6940 10512 4.688879 TGACCTGTTGAAGTAAGCAATACG 59.311 41.667 0.00 0.00 39.62 3.06
6986 10558 6.962311 AGAAGGCTCCTACCATCATATCATTA 59.038 38.462 0.00 0.00 29.62 1.90
7180 10753 0.669619 CATGCAATTGCCGGCTATGA 59.330 50.000 29.70 13.50 41.18 2.15
7252 10825 9.334947 TCAAAATGGTCATTTGCTTCAATTAAA 57.665 25.926 9.37 0.00 40.57 1.52
7460 11033 1.337260 ACCTGAAGCTACAAGACTGCG 60.337 52.381 0.00 0.00 0.00 5.18
7602 11175 1.138859 GGAACCAAAGTGGCAGCTTTT 59.861 47.619 10.88 0.28 42.67 2.27
7667 11240 1.558756 CAATCTGCTCCCAGGAGTTCT 59.441 52.381 15.05 0.00 43.70 3.01
7683 11256 6.736123 TCTCGTATTTGACTAGGTAGCAATC 58.264 40.000 0.00 0.00 0.00 2.67
7752 11327 4.211794 CAGAACACATGGACAAAATTTGGC 59.788 41.667 10.71 6.87 38.21 4.52
8001 11623 7.942341 ACTCAAAATAAGGTTGTACCAGATCAA 59.058 33.333 0.00 0.00 41.95 2.57
8002 11624 7.458397 ACTCAAAATAAGGTTGTACCAGATCA 58.542 34.615 0.00 0.00 41.95 2.92
8003 11625 7.923414 ACTCAAAATAAGGTTGTACCAGATC 57.077 36.000 0.00 0.00 41.95 2.75
8004 11626 8.576442 CAAACTCAAAATAAGGTTGTACCAGAT 58.424 33.333 0.00 0.00 41.95 2.90
8005 11627 7.776030 TCAAACTCAAAATAAGGTTGTACCAGA 59.224 33.333 1.28 0.00 41.95 3.86
8006 11628 7.936584 TCAAACTCAAAATAAGGTTGTACCAG 58.063 34.615 1.28 0.00 41.95 4.00
8008 11630 8.573035 TGATCAAACTCAAAATAAGGTTGTACC 58.427 33.333 0.00 0.00 41.28 3.34
8106 11839 7.559590 AACAGATTATACCATCAACAGAAGC 57.440 36.000 0.00 0.00 0.00 3.86
8143 11876 5.812642 GTCGTGATAAGATTGAGTGACCATT 59.187 40.000 0.00 0.00 0.00 3.16
8157 11892 1.585668 CAGCAGCTTCGTCGTGATAAG 59.414 52.381 0.00 0.00 0.00 1.73
8158 11893 1.201414 TCAGCAGCTTCGTCGTGATAA 59.799 47.619 0.00 0.00 0.00 1.75
8160 11895 0.734253 GTCAGCAGCTTCGTCGTGAT 60.734 55.000 0.00 0.00 0.00 3.06
8162 11897 2.375766 GGTCAGCAGCTTCGTCGTG 61.376 63.158 0.00 0.00 0.00 4.35
8262 12008 5.452216 GGCAATCCATTGTATCTGCATTTCA 60.452 40.000 1.37 0.00 39.88 2.69
8263 12009 4.986659 GGCAATCCATTGTATCTGCATTTC 59.013 41.667 1.37 0.00 39.88 2.17
8267 12013 2.309613 GGGCAATCCATTGTATCTGCA 58.690 47.619 1.37 0.00 39.88 4.41
8275 12021 2.376695 ATCAGAGGGGCAATCCATTG 57.623 50.000 0.00 0.00 40.66 2.82
8292 12039 9.699703 GGAGATATCAAAACTTGTCCTAGTATC 57.300 37.037 5.32 0.00 0.00 2.24
8298 12045 4.225267 ACGGGAGATATCAAAACTTGTCCT 59.775 41.667 5.32 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.