Multiple sequence alignment - TraesCS1D01G150400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1D01G150400 | chr1D | 100.000 | 7590 | 0 | 0 | 1 | 7590 | 208282312 | 208274723 | 0.000000e+00 | 14017.0 |
1 | TraesCS1D01G150400 | chr1D | 96.566 | 3990 | 106 | 17 | 2062 | 6037 | 227861211 | 227865183 | 0.000000e+00 | 6580.0 |
2 | TraesCS1D01G150400 | chr1D | 97.227 | 1262 | 31 | 2 | 780 | 2037 | 227859953 | 227861214 | 0.000000e+00 | 2134.0 |
3 | TraesCS1D01G150400 | chr1D | 94.364 | 763 | 31 | 4 | 11 | 772 | 227858920 | 227859671 | 0.000000e+00 | 1160.0 |
4 | TraesCS1D01G150400 | chr1D | 96.855 | 477 | 12 | 2 | 6403 | 6876 | 227865172 | 227865648 | 0.000000e+00 | 795.0 |
5 | TraesCS1D01G150400 | chr1D | 86.997 | 323 | 27 | 8 | 7149 | 7463 | 227865664 | 227865979 | 4.360000e-92 | 350.0 |
6 | TraesCS1D01G150400 | chr1D | 96.739 | 92 | 3 | 0 | 1 | 92 | 251026631 | 251026540 | 3.670000e-33 | 154.0 |
7 | TraesCS1D01G150400 | chr1D | 93.814 | 97 | 6 | 0 | 1 | 97 | 150297775 | 150297679 | 6.140000e-31 | 147.0 |
8 | TraesCS1D01G150400 | chr1D | 95.604 | 91 | 4 | 0 | 1 | 91 | 389392954 | 389393044 | 6.140000e-31 | 147.0 |
9 | TraesCS1D01G150400 | chr1A | 97.253 | 2548 | 60 | 6 | 2062 | 4600 | 295459829 | 295462375 | 0.000000e+00 | 4309.0 |
10 | TraesCS1D01G150400 | chr1A | 94.606 | 1446 | 50 | 14 | 4603 | 6037 | 295462702 | 295464130 | 0.000000e+00 | 2213.0 |
11 | TraesCS1D01G150400 | chr1A | 92.264 | 1047 | 43 | 9 | 1011 | 2037 | 295458804 | 295459832 | 0.000000e+00 | 1450.0 |
12 | TraesCS1D01G150400 | chr1A | 87.345 | 806 | 69 | 17 | 370 | 1156 | 295457485 | 295458276 | 0.000000e+00 | 893.0 |
13 | TraesCS1D01G150400 | chr1A | 93.305 | 478 | 24 | 4 | 6403 | 6876 | 295464119 | 295464592 | 0.000000e+00 | 699.0 |
14 | TraesCS1D01G150400 | chr1A | 82.162 | 740 | 95 | 23 | 1084 | 1811 | 311808690 | 311807976 | 1.090000e-167 | 601.0 |
15 | TraesCS1D01G150400 | chr1A | 83.550 | 614 | 82 | 12 | 2076 | 2672 | 311807458 | 311806847 | 2.390000e-154 | 556.0 |
16 | TraesCS1D01G150400 | chr1A | 98.942 | 189 | 2 | 0 | 1206 | 1394 | 295458269 | 295458457 | 9.430000e-89 | 339.0 |
17 | TraesCS1D01G150400 | chr1A | 93.548 | 93 | 5 | 1 | 1 | 93 | 235504159 | 235504250 | 3.690000e-28 | 137.0 |
18 | TraesCS1D01G150400 | chr1A | 80.214 | 187 | 32 | 4 | 399 | 584 | 459443205 | 459443387 | 1.330000e-27 | 135.0 |
19 | TraesCS1D01G150400 | chr1A | 92.308 | 91 | 7 | 0 | 1 | 91 | 34722936 | 34723026 | 6.180000e-26 | 130.0 |
20 | TraesCS1D01G150400 | chr1A | 85.714 | 77 | 9 | 2 | 7463 | 7537 | 535756800 | 535756724 | 6.310000e-11 | 80.5 |
21 | TraesCS1D01G150400 | chr1B | 95.469 | 2163 | 71 | 13 | 3885 | 6037 | 327481292 | 327483437 | 0.000000e+00 | 3426.0 |
22 | TraesCS1D01G150400 | chr1B | 97.596 | 1830 | 36 | 3 | 2064 | 3886 | 327479389 | 327481217 | 0.000000e+00 | 3129.0 |
23 | TraesCS1D01G150400 | chr1B | 96.398 | 1277 | 38 | 5 | 765 | 2037 | 327478119 | 327479391 | 0.000000e+00 | 2097.0 |
24 | TraesCS1D01G150400 | chr1B | 94.839 | 465 | 15 | 3 | 6403 | 6865 | 327483426 | 327483883 | 0.000000e+00 | 717.0 |
25 | TraesCS1D01G150400 | chr1B | 85.567 | 194 | 16 | 7 | 7154 | 7338 | 327483984 | 327484174 | 7.770000e-45 | 193.0 |
26 | TraesCS1D01G150400 | chr1B | 95.699 | 93 | 4 | 0 | 1 | 93 | 259524468 | 259524376 | 4.740000e-32 | 150.0 |
27 | TraesCS1D01G150400 | chr1B | 77.160 | 162 | 33 | 4 | 399 | 558 | 400585914 | 400585755 | 2.920000e-14 | 91.6 |
28 | TraesCS1D01G150400 | chr1B | 85.938 | 64 | 8 | 1 | 402 | 465 | 266653556 | 266653494 | 4.920000e-07 | 67.6 |
29 | TraesCS1D01G150400 | chr2D | 96.730 | 367 | 12 | 0 | 6041 | 6407 | 399894908 | 399894542 | 5.030000e-171 | 612.0 |
30 | TraesCS1D01G150400 | chr2D | 96.486 | 370 | 13 | 0 | 6036 | 6405 | 533883951 | 533884320 | 5.030000e-171 | 612.0 |
31 | TraesCS1D01G150400 | chr2D | 93.506 | 231 | 12 | 2 | 6927 | 7155 | 204112719 | 204112948 | 2.620000e-89 | 340.0 |
32 | TraesCS1D01G150400 | chr2D | 85.000 | 240 | 23 | 8 | 7232 | 7463 | 383292576 | 383292342 | 1.650000e-56 | 231.0 |
33 | TraesCS1D01G150400 | chr2D | 100.000 | 28 | 0 | 0 | 7460 | 7487 | 310709838 | 310709865 | 1.400000e-02 | 52.8 |
34 | TraesCS1D01G150400 | chr3D | 96.458 | 367 | 13 | 0 | 6038 | 6404 | 456103413 | 456103779 | 2.340000e-169 | 606.0 |
35 | TraesCS1D01G150400 | chr3D | 95.430 | 372 | 17 | 0 | 6034 | 6405 | 313910528 | 313910157 | 1.820000e-165 | 593.0 |
36 | TraesCS1D01G150400 | chr3D | 95.890 | 365 | 15 | 0 | 6041 | 6405 | 47242694 | 47242330 | 6.560000e-165 | 592.0 |
37 | TraesCS1D01G150400 | chr3D | 93.162 | 234 | 13 | 2 | 6927 | 7158 | 586579160 | 586578928 | 2.620000e-89 | 340.0 |
38 | TraesCS1D01G150400 | chr3D | 93.519 | 108 | 5 | 2 | 1 | 108 | 316528292 | 316528187 | 7.880000e-35 | 159.0 |
39 | TraesCS1D01G150400 | chr3D | 96.703 | 91 | 3 | 0 | 1 | 91 | 252039564 | 252039474 | 1.320000e-32 | 152.0 |
40 | TraesCS1D01G150400 | chr5D | 96.196 | 368 | 13 | 1 | 6038 | 6405 | 485159012 | 485159378 | 1.090000e-167 | 601.0 |
41 | TraesCS1D01G150400 | chr5D | 95.640 | 367 | 16 | 0 | 6041 | 6407 | 440155952 | 440155586 | 2.360000e-164 | 590.0 |
42 | TraesCS1D01G150400 | chr5D | 93.162 | 234 | 13 | 3 | 6927 | 7158 | 126262914 | 126262682 | 2.620000e-89 | 340.0 |
43 | TraesCS1D01G150400 | chr5D | 82.661 | 248 | 25 | 10 | 7230 | 7463 | 397198106 | 397198349 | 3.590000e-48 | 204.0 |
44 | TraesCS1D01G150400 | chr5D | 81.928 | 249 | 24 | 13 | 7230 | 7463 | 397224536 | 397224778 | 2.800000e-44 | 191.0 |
45 | TraesCS1D01G150400 | chr5D | 96.703 | 91 | 3 | 0 | 1 | 91 | 377904250 | 377904160 | 1.320000e-32 | 152.0 |
46 | TraesCS1D01G150400 | chr5D | 79.365 | 189 | 37 | 2 | 400 | 587 | 442675291 | 442675104 | 1.720000e-26 | 132.0 |
47 | TraesCS1D01G150400 | chr4D | 95.968 | 372 | 11 | 3 | 6036 | 6405 | 434278014 | 434278383 | 1.090000e-167 | 601.0 |
48 | TraesCS1D01G150400 | chr4D | 95.935 | 369 | 15 | 0 | 6037 | 6405 | 14974068 | 14974436 | 3.920000e-167 | 599.0 |
49 | TraesCS1D01G150400 | chr4D | 90.800 | 250 | 15 | 7 | 6927 | 7170 | 349816283 | 349816036 | 2.040000e-85 | 327.0 |
50 | TraesCS1D01G150400 | chr4D | 93.878 | 98 | 4 | 2 | 1 | 97 | 248400506 | 248400410 | 6.140000e-31 | 147.0 |
51 | TraesCS1D01G150400 | chr4D | 93.939 | 99 | 3 | 3 | 1 | 98 | 257669398 | 257669302 | 6.140000e-31 | 147.0 |
52 | TraesCS1D01G150400 | chr4D | 93.878 | 98 | 4 | 2 | 1 | 97 | 278599373 | 278599277 | 6.140000e-31 | 147.0 |
53 | TraesCS1D01G150400 | chr4D | 93.000 | 100 | 5 | 2 | 1 | 99 | 164981942 | 164981844 | 2.210000e-30 | 145.0 |
54 | TraesCS1D01G150400 | chrUn | 90.698 | 258 | 17 | 4 | 6901 | 7152 | 336901079 | 336901335 | 3.390000e-88 | 337.0 |
55 | TraesCS1D01G150400 | chrUn | 90.310 | 258 | 18 | 4 | 6901 | 7152 | 336902290 | 336902546 | 1.580000e-86 | 331.0 |
56 | TraesCS1D01G150400 | chrUn | 92.473 | 93 | 6 | 1 | 1 | 93 | 365491871 | 365491962 | 1.720000e-26 | 132.0 |
57 | TraesCS1D01G150400 | chrUn | 91.304 | 92 | 7 | 1 | 1 | 92 | 7660852 | 7660762 | 2.880000e-24 | 124.0 |
58 | TraesCS1D01G150400 | chrUn | 91.304 | 92 | 7 | 1 | 1 | 92 | 228318146 | 228318236 | 2.880000e-24 | 124.0 |
59 | TraesCS1D01G150400 | chrUn | 91.304 | 92 | 7 | 1 | 1 | 92 | 271940386 | 271940296 | 2.880000e-24 | 124.0 |
60 | TraesCS1D01G150400 | chrUn | 91.304 | 92 | 7 | 1 | 1 | 92 | 341416150 | 341416240 | 2.880000e-24 | 124.0 |
61 | TraesCS1D01G150400 | chrUn | 91.304 | 92 | 7 | 1 | 1 | 92 | 362030938 | 362030848 | 2.880000e-24 | 124.0 |
62 | TraesCS1D01G150400 | chrUn | 91.304 | 92 | 7 | 1 | 1 | 92 | 390869544 | 390869634 | 2.880000e-24 | 124.0 |
63 | TraesCS1D01G150400 | chrUn | 87.879 | 99 | 10 | 2 | 1 | 98 | 227624821 | 227624918 | 1.730000e-21 | 115.0 |
64 | TraesCS1D01G150400 | chrUn | 87.879 | 99 | 10 | 2 | 1 | 98 | 369624086 | 369624183 | 1.730000e-21 | 115.0 |
65 | TraesCS1D01G150400 | chr7D | 90.698 | 258 | 17 | 4 | 6901 | 7152 | 43988143 | 43988399 | 3.390000e-88 | 337.0 |
66 | TraesCS1D01G150400 | chr7D | 90.310 | 258 | 18 | 4 | 6901 | 7152 | 43986932 | 43987188 | 1.580000e-86 | 331.0 |
67 | TraesCS1D01G150400 | chr7D | 90.310 | 258 | 18 | 4 | 6901 | 7152 | 43989351 | 43989607 | 1.580000e-86 | 331.0 |
68 | TraesCS1D01G150400 | chr4A | 82.520 | 246 | 28 | 9 | 7230 | 7463 | 165816286 | 165816528 | 1.290000e-47 | 202.0 |
69 | TraesCS1D01G150400 | chr4A | 79.184 | 245 | 30 | 13 | 7230 | 7463 | 692948224 | 692947990 | 4.740000e-32 | 150.0 |
70 | TraesCS1D01G150400 | chr4A | 100.000 | 29 | 0 | 0 | 7459 | 7487 | 678874133 | 678874161 | 4.000000e-03 | 54.7 |
71 | TraesCS1D01G150400 | chr6B | 81.781 | 247 | 26 | 13 | 7230 | 7463 | 22949392 | 22949632 | 1.010000e-43 | 189.0 |
72 | TraesCS1D01G150400 | chr6B | 97.802 | 91 | 2 | 0 | 1 | 91 | 329156115 | 329156025 | 2.840000e-34 | 158.0 |
73 | TraesCS1D01G150400 | chr6B | 80.749 | 187 | 36 | 0 | 398 | 584 | 668983923 | 668984109 | 6.140000e-31 | 147.0 |
74 | TraesCS1D01G150400 | chr2B | 80.894 | 246 | 30 | 11 | 7230 | 7463 | 19081764 | 19081524 | 2.180000e-40 | 178.0 |
75 | TraesCS1D01G150400 | chr2B | 96.739 | 92 | 3 | 0 | 1 | 92 | 366877577 | 366877486 | 3.670000e-33 | 154.0 |
76 | TraesCS1D01G150400 | chr2B | 94.059 | 101 | 3 | 3 | 1 | 101 | 333050878 | 333050975 | 4.740000e-32 | 150.0 |
77 | TraesCS1D01G150400 | chr2B | 85.000 | 80 | 12 | 0 | 94 | 173 | 749403200 | 749403279 | 1.760000e-11 | 82.4 |
78 | TraesCS1D01G150400 | chr5B | 80.081 | 246 | 31 | 12 | 7230 | 7463 | 491101747 | 491101508 | 4.710000e-37 | 167.0 |
79 | TraesCS1D01G150400 | chr5B | 92.523 | 107 | 5 | 3 | 1 | 106 | 160069872 | 160069976 | 4.740000e-32 | 150.0 |
80 | TraesCS1D01G150400 | chr5B | 77.540 | 187 | 41 | 1 | 401 | 587 | 493924537 | 493924352 | 2.240000e-20 | 111.0 |
81 | TraesCS1D01G150400 | chr3B | 97.753 | 89 | 2 | 0 | 1 | 89 | 347708458 | 347708546 | 3.670000e-33 | 154.0 |
82 | TraesCS1D01G150400 | chr7B | 96.703 | 91 | 3 | 0 | 1 | 91 | 306112566 | 306112656 | 1.320000e-32 | 152.0 |
83 | TraesCS1D01G150400 | chr7B | 79.755 | 163 | 28 | 4 | 425 | 584 | 129965695 | 129965855 | 6.220000e-21 | 113.0 |
84 | TraesCS1D01G150400 | chr6D | 95.699 | 93 | 4 | 0 | 1 | 93 | 355067710 | 355067802 | 4.740000e-32 | 150.0 |
85 | TraesCS1D01G150400 | chr6D | 95.699 | 93 | 3 | 1 | 1 | 93 | 187550192 | 187550283 | 1.710000e-31 | 148.0 |
86 | TraesCS1D01G150400 | chr6D | 83.030 | 165 | 27 | 1 | 397 | 561 | 413071369 | 413071532 | 1.710000e-31 | 148.0 |
87 | TraesCS1D01G150400 | chr6D | 95.604 | 91 | 4 | 0 | 1 | 91 | 355060497 | 355060587 | 6.140000e-31 | 147.0 |
88 | TraesCS1D01G150400 | chr6D | 94.505 | 91 | 5 | 0 | 1 | 91 | 235322044 | 235322134 | 2.860000e-29 | 141.0 |
89 | TraesCS1D01G150400 | chr6D | 92.391 | 92 | 6 | 1 | 1 | 92 | 367332575 | 367332665 | 6.180000e-26 | 130.0 |
90 | TraesCS1D01G150400 | chr6D | 92.308 | 91 | 6 | 1 | 1 | 91 | 228344763 | 228344674 | 2.220000e-25 | 128.0 |
91 | TraesCS1D01G150400 | chr6D | 91.398 | 93 | 7 | 1 | 1 | 93 | 115826216 | 115826307 | 8.000000e-25 | 126.0 |
92 | TraesCS1D01G150400 | chr6D | 91.398 | 93 | 7 | 1 | 1 | 93 | 199312406 | 199312315 | 8.000000e-25 | 126.0 |
93 | TraesCS1D01G150400 | chr6D | 89.796 | 98 | 8 | 2 | 1 | 97 | 228383290 | 228383194 | 2.880000e-24 | 124.0 |
94 | TraesCS1D01G150400 | chr6D | 89.796 | 98 | 8 | 2 | 1 | 98 | 267589553 | 267589458 | 2.880000e-24 | 124.0 |
95 | TraesCS1D01G150400 | chr6D | 86.567 | 67 | 7 | 2 | 399 | 464 | 89736606 | 89736671 | 1.060000e-08 | 73.1 |
96 | TraesCS1D01G150400 | chr4B | 93.878 | 98 | 6 | 0 | 1 | 98 | 76733102 | 76733005 | 1.710000e-31 | 148.0 |
97 | TraesCS1D01G150400 | chr4B | 79.459 | 185 | 35 | 2 | 401 | 584 | 553611335 | 553611153 | 2.220000e-25 | 128.0 |
98 | TraesCS1D01G150400 | chr4B | 81.301 | 123 | 20 | 2 | 7462 | 7581 | 666586843 | 666586965 | 6.270000e-16 | 97.1 |
99 | TraesCS1D01G150400 | chr4B | 82.895 | 76 | 11 | 1 | 7463 | 7536 | 638181724 | 638181799 | 4.920000e-07 | 67.6 |
100 | TraesCS1D01G150400 | chr6A | 95.604 | 91 | 4 | 0 | 1 | 91 | 256252209 | 256252119 | 6.140000e-31 | 147.0 |
101 | TraesCS1D01G150400 | chr6A | 95.604 | 91 | 4 | 0 | 1 | 91 | 302401770 | 302401860 | 6.140000e-31 | 147.0 |
102 | TraesCS1D01G150400 | chr6A | 95.506 | 89 | 4 | 0 | 1 | 89 | 228028539 | 228028627 | 7.940000e-30 | 143.0 |
103 | TraesCS1D01G150400 | chr6A | 94.505 | 91 | 4 | 1 | 1 | 91 | 390466393 | 390466304 | 1.030000e-28 | 139.0 |
104 | TraesCS1D01G150400 | chr3A | 78.804 | 184 | 36 | 2 | 402 | 584 | 382257505 | 382257324 | 3.720000e-23 | 121.0 |
105 | TraesCS1D01G150400 | chr5A | 77.957 | 186 | 39 | 2 | 399 | 584 | 18630521 | 18630704 | 1.730000e-21 | 115.0 |
106 | TraesCS1D01G150400 | chr7A | 79.279 | 111 | 17 | 4 | 7461 | 7566 | 28356846 | 28356737 | 1.060000e-08 | 73.1 |
107 | TraesCS1D01G150400 | chr7A | 88.636 | 44 | 4 | 1 | 488 | 531 | 279176491 | 279176533 | 1.400000e-02 | 52.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1D01G150400 | chr1D | 208274723 | 208282312 | 7589 | True | 14017.0 | 14017 | 100.000000 | 1 | 7590 | 1 | chr1D.!!$R2 | 7589 |
1 | TraesCS1D01G150400 | chr1D | 227858920 | 227865979 | 7059 | False | 2203.8 | 6580 | 94.401800 | 11 | 7463 | 5 | chr1D.!!$F2 | 7452 |
2 | TraesCS1D01G150400 | chr1A | 295457485 | 295464592 | 7107 | False | 1650.5 | 4309 | 93.952500 | 370 | 6876 | 6 | chr1A.!!$F4 | 6506 |
3 | TraesCS1D01G150400 | chr1A | 311806847 | 311808690 | 1843 | True | 578.5 | 601 | 82.856000 | 1084 | 2672 | 2 | chr1A.!!$R2 | 1588 |
4 | TraesCS1D01G150400 | chr1B | 327478119 | 327484174 | 6055 | False | 1912.4 | 3426 | 93.973800 | 765 | 7338 | 5 | chr1B.!!$F1 | 6573 |
5 | TraesCS1D01G150400 | chrUn | 336901079 | 336902546 | 1467 | False | 334.0 | 337 | 90.504000 | 6901 | 7152 | 2 | chrUn.!!$F7 | 251 |
6 | TraesCS1D01G150400 | chr7D | 43986932 | 43989607 | 2675 | False | 333.0 | 337 | 90.439333 | 6901 | 7152 | 3 | chr7D.!!$F1 | 251 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
431 | 437 | 0.253327 | GGTTGGATGGTCAGGAGGAC | 59.747 | 60.000 | 0.00 | 0.00 | 46.20 | 3.85 | F |
536 | 543 | 0.740868 | CGATGTGCGTTCAGTGGGAT | 60.741 | 55.000 | 0.00 | 0.00 | 34.64 | 3.85 | F |
1296 | 2280 | 1.304547 | CCACGTCCACTCCCTCTCT | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 3.10 | F |
2059 | 3406 | 1.774254 | TCCCAGCTTTCCTTTGTCTCA | 59.226 | 47.619 | 0.00 | 0.00 | 0.00 | 3.27 | F |
3457 | 4822 | 1.740025 | GAACATGTAGCAGGCTTGACC | 59.260 | 52.381 | 0.00 | 0.00 | 39.61 | 4.02 | F |
3648 | 5014 | 0.833287 | TGAGCTCTAGAATGCCACCC | 59.167 | 55.000 | 16.19 | 0.00 | 0.00 | 4.61 | F |
3662 | 5028 | 1.070914 | GCCACCCTAGTAATCCTCTGC | 59.929 | 57.143 | 0.00 | 0.00 | 0.00 | 4.26 | F |
5603 | 7391 | 1.464687 | GCAAGATACAACAGCAGTGCG | 60.465 | 52.381 | 10.00 | 7.44 | 0.00 | 5.34 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1428 | 2412 | 1.686110 | GGTCCTGATCCCCACGTCT | 60.686 | 63.158 | 0.00 | 0.0 | 0.00 | 4.18 | R |
2039 | 3386 | 1.774254 | TGAGACAAAGGAAAGCTGGGA | 59.226 | 47.619 | 0.00 | 0.0 | 0.00 | 4.37 | R |
2170 | 3525 | 2.892215 | TGGCACATCTGAAATCAAAGCA | 59.108 | 40.909 | 0.00 | 0.0 | 0.00 | 3.91 | R |
3576 | 4941 | 0.111253 | AGCCTCACAACAGGAAAGGG | 59.889 | 55.000 | 0.00 | 0.0 | 35.20 | 3.95 | R |
5131 | 6907 | 0.680921 | ACAATGATGCACGGAAGGGG | 60.681 | 55.000 | 0.00 | 0.0 | 32.68 | 4.79 | R |
5603 | 7391 | 1.593006 | CCGCGTCATTATGAAGTCACC | 59.407 | 52.381 | 4.92 | 0.0 | 0.00 | 4.02 | R |
5713 | 7501 | 0.321996 | GTGGAACGGAAGAGCTCCTT | 59.678 | 55.000 | 10.93 | 4.0 | 42.85 | 3.36 | R |
7531 | 11434 | 0.108329 | AAACGGATACAGACAGGCGG | 60.108 | 55.000 | 0.00 | 0.0 | 0.00 | 6.13 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
42 | 43 | 3.005554 | CAATATGCGGCTCTATCCTTGG | 58.994 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
43 | 44 | 0.321671 | TATGCGGCTCTATCCTTGGC | 59.678 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
63 | 64 | 0.818938 | GGGACCTTCGAGTTCCTCTC | 59.181 | 60.000 | 8.46 | 0.00 | 39.62 | 3.20 |
100 | 101 | 1.301716 | GGCGTGACAGTGTGGATGT | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 3.06 |
151 | 152 | 1.104577 | TGTTGGTTTCGGGTTGCTCC | 61.105 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
220 | 221 | 0.961857 | TATGTTGCTGCTGCCCTGTG | 60.962 | 55.000 | 13.47 | 0.00 | 38.71 | 3.66 |
221 | 222 | 2.908940 | GTTGCTGCTGCCCTGTGT | 60.909 | 61.111 | 13.47 | 0.00 | 38.71 | 3.72 |
222 | 223 | 1.600636 | GTTGCTGCTGCCCTGTGTA | 60.601 | 57.895 | 13.47 | 0.00 | 38.71 | 2.90 |
223 | 224 | 1.302752 | TTGCTGCTGCCCTGTGTAG | 60.303 | 57.895 | 13.47 | 0.00 | 38.71 | 2.74 |
225 | 226 | 3.072476 | CTGCTGCCCTGTGTAGGT | 58.928 | 61.111 | 0.00 | 0.00 | 42.96 | 3.08 |
226 | 227 | 1.376424 | CTGCTGCCCTGTGTAGGTG | 60.376 | 63.158 | 0.00 | 0.00 | 42.96 | 4.00 |
227 | 228 | 2.116983 | CTGCTGCCCTGTGTAGGTGT | 62.117 | 60.000 | 0.00 | 0.00 | 42.96 | 4.16 |
231 | 233 | 1.608590 | CTGCCCTGTGTAGGTGTTTTG | 59.391 | 52.381 | 0.00 | 0.00 | 42.96 | 2.44 |
269 | 271 | 3.173599 | GTTTTTCGTTAATTAGCCGGGC | 58.826 | 45.455 | 12.11 | 12.11 | 0.00 | 6.13 |
270 | 272 | 2.110901 | TTTCGTTAATTAGCCGGGCA | 57.889 | 45.000 | 23.09 | 0.60 | 0.00 | 5.36 |
271 | 273 | 2.110901 | TTCGTTAATTAGCCGGGCAA | 57.889 | 45.000 | 23.09 | 13.63 | 0.00 | 4.52 |
272 | 274 | 2.335316 | TCGTTAATTAGCCGGGCAAT | 57.665 | 45.000 | 23.09 | 15.29 | 0.00 | 3.56 |
273 | 275 | 2.645802 | TCGTTAATTAGCCGGGCAATT | 58.354 | 42.857 | 23.09 | 23.23 | 0.00 | 2.32 |
274 | 276 | 2.614983 | TCGTTAATTAGCCGGGCAATTC | 59.385 | 45.455 | 23.09 | 12.00 | 0.00 | 2.17 |
275 | 277 | 2.616842 | CGTTAATTAGCCGGGCAATTCT | 59.383 | 45.455 | 23.09 | 1.81 | 0.00 | 2.40 |
276 | 278 | 3.548014 | CGTTAATTAGCCGGGCAATTCTG | 60.548 | 47.826 | 23.09 | 12.86 | 0.00 | 3.02 |
291 | 293 | 7.158697 | GGGCAATTCTGTTACACCTTTTTAAT | 58.841 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
431 | 437 | 0.253327 | GGTTGGATGGTCAGGAGGAC | 59.747 | 60.000 | 0.00 | 0.00 | 46.20 | 3.85 |
442 | 448 | 2.104963 | GTCAGGAGGACAATGGTATCCC | 59.895 | 54.545 | 1.07 | 0.00 | 46.19 | 3.85 |
458 | 464 | 1.923395 | CCCCAGCTCACCAGGGTTA | 60.923 | 63.158 | 5.40 | 0.00 | 41.16 | 2.85 |
485 | 491 | 3.744426 | CCTCGACTTAACATCGGTGTTTT | 59.256 | 43.478 | 20.89 | 4.47 | 46.07 | 2.43 |
486 | 492 | 4.143179 | CCTCGACTTAACATCGGTGTTTTC | 60.143 | 45.833 | 20.89 | 12.60 | 46.07 | 2.29 |
536 | 543 | 0.740868 | CGATGTGCGTTCAGTGGGAT | 60.741 | 55.000 | 0.00 | 0.00 | 34.64 | 3.85 |
631 | 651 | 5.220970 | GGAGTGCTTTGTACTGTGCTAAAAA | 60.221 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
632 | 652 | 5.578776 | AGTGCTTTGTACTGTGCTAAAAAC | 58.421 | 37.500 | 0.00 | 0.00 | 0.00 | 2.43 |
815 | 1118 | 1.479709 | CACTCCGTCATCCTCCTCTT | 58.520 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
1046 | 2030 | 2.207924 | ACGAGAAGAAGGCCACGGT | 61.208 | 57.895 | 5.01 | 0.00 | 0.00 | 4.83 |
1296 | 2280 | 1.304547 | CCACGTCCACTCCCTCTCT | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 3.10 |
1434 | 2418 | 2.436539 | CGATCGCACCACAGACGTG | 61.437 | 63.158 | 0.26 | 0.00 | 43.21 | 4.49 |
1769 | 2762 | 2.750948 | TGTTACCTTCTGCACTCGTTC | 58.249 | 47.619 | 0.00 | 0.00 | 0.00 | 3.95 |
1927 | 3258 | 8.515473 | TGTTTATCCTGATATTATGACGAACG | 57.485 | 34.615 | 0.00 | 0.00 | 0.00 | 3.95 |
1937 | 3268 | 8.347035 | TGATATTATGACGAACGTGATAACTCA | 58.653 | 33.333 | 17.74 | 18.39 | 37.11 | 3.41 |
1952 | 3296 | 6.543831 | GTGATAACTCATGCCCTGATTAAGTT | 59.456 | 38.462 | 0.00 | 0.00 | 32.98 | 2.66 |
1958 | 3302 | 6.322201 | ACTCATGCCCTGATTAAGTTATTTGG | 59.678 | 38.462 | 0.00 | 0.00 | 32.10 | 3.28 |
1963 | 3307 | 8.423906 | TGCCCTGATTAAGTTATTTGGTTTAA | 57.576 | 30.769 | 0.00 | 0.00 | 0.00 | 1.52 |
2037 | 3384 | 8.654230 | TGTCTCATATTTGCAGTAGAGATTTC | 57.346 | 34.615 | 8.83 | 0.54 | 34.97 | 2.17 |
2038 | 3385 | 8.260114 | TGTCTCATATTTGCAGTAGAGATTTCA | 58.740 | 33.333 | 8.83 | 2.48 | 34.97 | 2.69 |
2039 | 3386 | 9.270640 | GTCTCATATTTGCAGTAGAGATTTCAT | 57.729 | 33.333 | 8.83 | 0.00 | 34.97 | 2.57 |
2040 | 3387 | 9.486497 | TCTCATATTTGCAGTAGAGATTTCATC | 57.514 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
2041 | 3388 | 8.613060 | TCATATTTGCAGTAGAGATTTCATCC | 57.387 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
2042 | 3389 | 7.663081 | TCATATTTGCAGTAGAGATTTCATCCC | 59.337 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
2043 | 3390 | 4.842531 | TTGCAGTAGAGATTTCATCCCA | 57.157 | 40.909 | 0.00 | 0.00 | 0.00 | 4.37 |
2044 | 3391 | 4.412796 | TGCAGTAGAGATTTCATCCCAG | 57.587 | 45.455 | 0.00 | 0.00 | 0.00 | 4.45 |
2045 | 3392 | 3.137533 | GCAGTAGAGATTTCATCCCAGC | 58.862 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2046 | 3393 | 3.181456 | GCAGTAGAGATTTCATCCCAGCT | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 4.24 |
2047 | 3394 | 4.685575 | GCAGTAGAGATTTCATCCCAGCTT | 60.686 | 45.833 | 0.00 | 0.00 | 0.00 | 3.74 |
2048 | 3395 | 5.435291 | CAGTAGAGATTTCATCCCAGCTTT | 58.565 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
2049 | 3396 | 5.526846 | CAGTAGAGATTTCATCCCAGCTTTC | 59.473 | 44.000 | 0.00 | 0.00 | 0.00 | 2.62 |
2050 | 3397 | 3.895998 | AGAGATTTCATCCCAGCTTTCC | 58.104 | 45.455 | 0.00 | 0.00 | 0.00 | 3.13 |
2051 | 3398 | 3.526841 | AGAGATTTCATCCCAGCTTTCCT | 59.473 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
2052 | 3399 | 4.017683 | AGAGATTTCATCCCAGCTTTCCTT | 60.018 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
2053 | 3400 | 4.681484 | AGATTTCATCCCAGCTTTCCTTT | 58.319 | 39.130 | 0.00 | 0.00 | 0.00 | 3.11 |
2054 | 3401 | 4.465305 | AGATTTCATCCCAGCTTTCCTTTG | 59.535 | 41.667 | 0.00 | 0.00 | 0.00 | 2.77 |
2055 | 3402 | 2.978156 | TCATCCCAGCTTTCCTTTGT | 57.022 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2056 | 3403 | 2.795329 | TCATCCCAGCTTTCCTTTGTC | 58.205 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
2057 | 3404 | 2.376518 | TCATCCCAGCTTTCCTTTGTCT | 59.623 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
2058 | 3405 | 2.568623 | TCCCAGCTTTCCTTTGTCTC | 57.431 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2059 | 3406 | 1.774254 | TCCCAGCTTTCCTTTGTCTCA | 59.226 | 47.619 | 0.00 | 0.00 | 0.00 | 3.27 |
2060 | 3407 | 2.376518 | TCCCAGCTTTCCTTTGTCTCAT | 59.623 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
2170 | 3525 | 4.037923 | ACCACATTTCTTCGCATTTCTGTT | 59.962 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
2171 | 3526 | 4.383649 | CCACATTTCTTCGCATTTCTGTTG | 59.616 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
2183 | 3538 | 5.388061 | CGCATTTCTGTTGCTTTGATTTCAG | 60.388 | 40.000 | 0.00 | 0.00 | 37.96 | 3.02 |
2344 | 3707 | 3.470709 | TGCTGATGCTTGCTATAGGTTC | 58.529 | 45.455 | 1.04 | 0.00 | 40.48 | 3.62 |
2872 | 4235 | 2.203209 | CAGATAAGCGGTGGCCCC | 60.203 | 66.667 | 0.00 | 0.00 | 41.24 | 5.80 |
3069 | 4432 | 6.633500 | TCAAGACCGATTGAATCTTTTTGT | 57.367 | 33.333 | 3.43 | 0.00 | 36.28 | 2.83 |
3457 | 4822 | 1.740025 | GAACATGTAGCAGGCTTGACC | 59.260 | 52.381 | 0.00 | 0.00 | 39.61 | 4.02 |
3576 | 4941 | 5.249420 | AGGAAATGAAGAGAAAGGTACAGC | 58.751 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
3648 | 5014 | 0.833287 | TGAGCTCTAGAATGCCACCC | 59.167 | 55.000 | 16.19 | 0.00 | 0.00 | 4.61 |
3657 | 5023 | 4.838986 | TCTAGAATGCCACCCTAGTAATCC | 59.161 | 45.833 | 0.00 | 0.00 | 33.48 | 3.01 |
3662 | 5028 | 1.070914 | GCCACCCTAGTAATCCTCTGC | 59.929 | 57.143 | 0.00 | 0.00 | 0.00 | 4.26 |
3717 | 5083 | 4.602340 | ACTATAGTAGCGAACATTGGGG | 57.398 | 45.455 | 2.75 | 0.00 | 0.00 | 4.96 |
3751 | 5117 | 7.473735 | TGGTGATGACCTGCAAAATTATTAA | 57.526 | 32.000 | 2.11 | 0.00 | 43.58 | 1.40 |
4140 | 5582 | 6.389830 | TTCATTTTCTGCTTTGCACTCTTA | 57.610 | 33.333 | 0.00 | 0.00 | 33.79 | 2.10 |
4182 | 5624 | 3.194968 | GTCGAGATTTCAGGGAGGTGTTA | 59.805 | 47.826 | 0.00 | 0.00 | 0.00 | 2.41 |
4199 | 5641 | 5.298276 | AGGTGTTATGACTTCGCTTTTCAAA | 59.702 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
4252 | 5694 | 9.674068 | TGATGTTGGCAAAAATAGTAGTATACA | 57.326 | 29.630 | 0.00 | 0.00 | 46.26 | 2.29 |
4275 | 5717 | 8.565896 | ACATATGTAACATGTCTGTGATGTTT | 57.434 | 30.769 | 6.56 | 0.00 | 40.39 | 2.83 |
4510 | 5953 | 7.256296 | CCCCAATTCCTGATAAAGACTTGTTTT | 60.256 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
4511 | 5954 | 8.802267 | CCCAATTCCTGATAAAGACTTGTTTTA | 58.198 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
4512 | 5955 | 9.846248 | CCAATTCCTGATAAAGACTTGTTTTAG | 57.154 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
4560 | 6007 | 3.213206 | TGGTGCAGACATTCTTTCTGT | 57.787 | 42.857 | 0.00 | 0.00 | 42.26 | 3.41 |
4566 | 6013 | 7.611467 | TGGTGCAGACATTCTTTCTGTTAATAT | 59.389 | 33.333 | 0.00 | 0.00 | 42.26 | 1.28 |
4644 | 6417 | 3.715628 | AGCATTAACGATTTGCATCCC | 57.284 | 42.857 | 0.00 | 0.00 | 38.84 | 3.85 |
4672 | 6445 | 8.958119 | ATTTAGAAGCATCAATGATTTGCAAT | 57.042 | 26.923 | 10.91 | 0.22 | 36.41 | 3.56 |
4749 | 6522 | 5.758296 | TGCTACATTTGACGTTCTTTCTTCT | 59.242 | 36.000 | 0.00 | 0.00 | 0.00 | 2.85 |
5034 | 6810 | 5.583854 | GTCATATCTGTGACAGTTTCAGCAT | 59.416 | 40.000 | 12.93 | 0.00 | 46.04 | 3.79 |
5035 | 6811 | 5.583457 | TCATATCTGTGACAGTTTCAGCATG | 59.417 | 40.000 | 12.93 | 4.98 | 33.71 | 4.06 |
5083 | 6859 | 4.993705 | ATGTTCTCCCTTTGACCACTTA | 57.006 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
5131 | 6907 | 3.881780 | TTTGCTTGCATGCACATTTTC | 57.118 | 38.095 | 25.30 | 6.48 | 43.20 | 2.29 |
5155 | 6931 | 3.181507 | CCTTCCGTGCATCATTGTTAGTG | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
5180 | 6956 | 5.892348 | AGTTCCTTCAATGGATACCACTTT | 58.108 | 37.500 | 0.00 | 0.00 | 35.80 | 2.66 |
5341 | 7118 | 8.437742 | CAAGATGCTTTTCAATCAACCAATTAC | 58.562 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
5603 | 7391 | 1.464687 | GCAAGATACAACAGCAGTGCG | 60.465 | 52.381 | 10.00 | 7.44 | 0.00 | 5.34 |
5713 | 7501 | 1.440938 | GCCACAACACTAACACGCCA | 61.441 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
5755 | 7543 | 0.107993 | ATCAGCACAGTCCATCACCG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
5766 | 7554 | 4.094646 | ATCACCGCCGCCACATGA | 62.095 | 61.111 | 0.00 | 0.00 | 0.00 | 3.07 |
5768 | 7556 | 3.879682 | CACCGCCGCCACATGATG | 61.880 | 66.667 | 0.00 | 0.00 | 0.00 | 3.07 |
5836 | 7624 | 2.488347 | GCCAGTTTACTCCCAACCAGAA | 60.488 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5842 | 7630 | 2.887151 | ACTCCCAACCAGAATCAAGG | 57.113 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
5868 | 7656 | 1.557832 | GTACTCACAGCCATACCCCAA | 59.442 | 52.381 | 0.00 | 0.00 | 0.00 | 4.12 |
5877 | 7665 | 1.478654 | GCCATACCCCAACTATGGTGG | 60.479 | 57.143 | 6.37 | 0.00 | 46.01 | 4.61 |
6043 | 7831 | 3.585856 | CCGCAGCAACCGGTAAAT | 58.414 | 55.556 | 8.00 | 0.00 | 40.84 | 1.40 |
6044 | 7832 | 1.880186 | CCGCAGCAACCGGTAAATT | 59.120 | 52.632 | 8.00 | 0.00 | 40.84 | 1.82 |
6045 | 7833 | 0.242555 | CCGCAGCAACCGGTAAATTT | 59.757 | 50.000 | 8.00 | 0.00 | 40.84 | 1.82 |
6046 | 7834 | 1.335935 | CGCAGCAACCGGTAAATTTG | 58.664 | 50.000 | 8.00 | 2.39 | 0.00 | 2.32 |
6047 | 7835 | 1.068885 | CGCAGCAACCGGTAAATTTGA | 60.069 | 47.619 | 8.00 | 0.00 | 0.00 | 2.69 |
6048 | 7836 | 2.324860 | GCAGCAACCGGTAAATTTGAC | 58.675 | 47.619 | 8.00 | 0.00 | 0.00 | 3.18 |
6049 | 7837 | 2.287909 | GCAGCAACCGGTAAATTTGACA | 60.288 | 45.455 | 8.00 | 0.00 | 0.00 | 3.58 |
6050 | 7838 | 3.797184 | GCAGCAACCGGTAAATTTGACAA | 60.797 | 43.478 | 8.00 | 0.00 | 0.00 | 3.18 |
6051 | 7839 | 4.363999 | CAGCAACCGGTAAATTTGACAAA | 58.636 | 39.130 | 8.00 | 2.48 | 0.00 | 2.83 |
6052 | 7840 | 4.987912 | CAGCAACCGGTAAATTTGACAAAT | 59.012 | 37.500 | 8.00 | 7.62 | 0.00 | 2.32 |
6053 | 7841 | 5.465056 | CAGCAACCGGTAAATTTGACAAATT | 59.535 | 36.000 | 18.41 | 18.41 | 42.62 | 1.82 |
6066 | 7854 | 9.840427 | AAATTTGACAAATTTGACCTATAGACG | 57.160 | 29.630 | 29.31 | 0.00 | 46.30 | 4.18 |
6067 | 7855 | 8.786826 | ATTTGACAAATTTGACCTATAGACGA | 57.213 | 30.769 | 24.64 | 0.00 | 0.00 | 4.20 |
6068 | 7856 | 8.610248 | TTTGACAAATTTGACCTATAGACGAA | 57.390 | 30.769 | 24.64 | 3.11 | 0.00 | 3.85 |
6069 | 7857 | 8.610248 | TTGACAAATTTGACCTATAGACGAAA | 57.390 | 30.769 | 24.64 | 2.44 | 0.00 | 3.46 |
6070 | 7858 | 8.786826 | TGACAAATTTGACCTATAGACGAAAT | 57.213 | 30.769 | 24.64 | 0.00 | 0.00 | 2.17 |
6071 | 7859 | 8.879759 | TGACAAATTTGACCTATAGACGAAATC | 58.120 | 33.333 | 24.64 | 6.30 | 0.00 | 2.17 |
6072 | 7860 | 8.786826 | ACAAATTTGACCTATAGACGAAATCA | 57.213 | 30.769 | 24.64 | 0.00 | 0.00 | 2.57 |
6073 | 7861 | 9.226606 | ACAAATTTGACCTATAGACGAAATCAA | 57.773 | 29.630 | 24.64 | 0.00 | 0.00 | 2.57 |
6077 | 7865 | 9.613428 | ATTTGACCTATAGACGAAATCAAATCA | 57.387 | 29.630 | 0.00 | 0.00 | 39.78 | 2.57 |
6078 | 7866 | 8.420374 | TTGACCTATAGACGAAATCAAATCAC | 57.580 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
6079 | 7867 | 7.552459 | TGACCTATAGACGAAATCAAATCACA | 58.448 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
6080 | 7868 | 7.706607 | TGACCTATAGACGAAATCAAATCACAG | 59.293 | 37.037 | 0.00 | 0.00 | 0.00 | 3.66 |
6081 | 7869 | 7.782049 | ACCTATAGACGAAATCAAATCACAGA | 58.218 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
6082 | 7870 | 8.258007 | ACCTATAGACGAAATCAAATCACAGAA | 58.742 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
6083 | 7871 | 9.265901 | CCTATAGACGAAATCAAATCACAGAAT | 57.734 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
6085 | 7873 | 8.722480 | ATAGACGAAATCAAATCACAGAATGA | 57.278 | 30.769 | 0.00 | 0.00 | 43.13 | 2.57 |
6086 | 7874 | 7.439157 | AGACGAAATCAAATCACAGAATGAA | 57.561 | 32.000 | 0.00 | 0.00 | 41.93 | 2.57 |
6087 | 7875 | 7.301054 | AGACGAAATCAAATCACAGAATGAAC | 58.699 | 34.615 | 0.00 | 0.00 | 41.93 | 3.18 |
6088 | 7876 | 7.173907 | AGACGAAATCAAATCACAGAATGAACT | 59.826 | 33.333 | 0.00 | 0.00 | 41.93 | 3.01 |
6089 | 7877 | 7.080099 | ACGAAATCAAATCACAGAATGAACTG | 58.920 | 34.615 | 0.00 | 0.00 | 41.93 | 3.16 |
6100 | 7888 | 5.409643 | CAGAATGAACTGTTCGTGAAACT | 57.590 | 39.130 | 15.47 | 10.02 | 39.69 | 2.66 |
6101 | 7889 | 6.525121 | CAGAATGAACTGTTCGTGAAACTA | 57.475 | 37.500 | 15.47 | 0.00 | 39.69 | 2.24 |
6102 | 7890 | 7.121974 | CAGAATGAACTGTTCGTGAAACTAT | 57.878 | 36.000 | 15.47 | 0.00 | 39.69 | 2.12 |
6103 | 7891 | 7.576236 | CAGAATGAACTGTTCGTGAAACTATT | 58.424 | 34.615 | 15.47 | 7.03 | 39.69 | 1.73 |
6104 | 7892 | 8.070171 | CAGAATGAACTGTTCGTGAAACTATTT | 58.930 | 33.333 | 15.47 | 0.00 | 39.69 | 1.40 |
6105 | 7893 | 8.283291 | AGAATGAACTGTTCGTGAAACTATTTC | 58.717 | 33.333 | 15.47 | 6.60 | 38.76 | 2.17 |
6106 | 7894 | 6.912203 | TGAACTGTTCGTGAAACTATTTCA | 57.088 | 33.333 | 15.18 | 0.00 | 46.68 | 2.69 |
6113 | 7901 | 1.803334 | TGAAACTATTTCACGCGGCT | 58.197 | 45.000 | 12.47 | 0.00 | 44.21 | 5.52 |
6114 | 7902 | 1.463056 | TGAAACTATTTCACGCGGCTG | 59.537 | 47.619 | 12.47 | 0.00 | 44.21 | 4.85 |
6115 | 7903 | 1.730064 | GAAACTATTTCACGCGGCTGA | 59.270 | 47.619 | 12.47 | 2.44 | 39.45 | 4.26 |
6116 | 7904 | 1.076332 | AACTATTTCACGCGGCTGAC | 58.924 | 50.000 | 12.47 | 0.00 | 0.00 | 3.51 |
6117 | 7905 | 0.739813 | ACTATTTCACGCGGCTGACC | 60.740 | 55.000 | 12.47 | 0.00 | 0.00 | 4.02 |
6118 | 7906 | 1.429148 | CTATTTCACGCGGCTGACCC | 61.429 | 60.000 | 12.47 | 0.00 | 0.00 | 4.46 |
6129 | 7917 | 4.514577 | CTGACCCGTGGCGCCTAG | 62.515 | 72.222 | 29.70 | 20.71 | 0.00 | 3.02 |
6139 | 7927 | 4.577246 | GCGCCTAGCTCCCAGACG | 62.577 | 72.222 | 0.00 | 0.00 | 44.04 | 4.18 |
6140 | 7928 | 4.577246 | CGCCTAGCTCCCAGACGC | 62.577 | 72.222 | 0.00 | 0.00 | 0.00 | 5.19 |
6141 | 7929 | 3.151022 | GCCTAGCTCCCAGACGCT | 61.151 | 66.667 | 0.00 | 0.00 | 40.15 | 5.07 |
6142 | 7930 | 2.811101 | CCTAGCTCCCAGACGCTG | 59.189 | 66.667 | 0.00 | 0.52 | 37.05 | 5.18 |
6143 | 7931 | 2.105930 | CTAGCTCCCAGACGCTGC | 59.894 | 66.667 | 0.00 | 0.00 | 37.05 | 5.25 |
6144 | 7932 | 2.679996 | TAGCTCCCAGACGCTGCA | 60.680 | 61.111 | 0.00 | 0.00 | 37.05 | 4.41 |
6145 | 7933 | 2.897641 | CTAGCTCCCAGACGCTGCAC | 62.898 | 65.000 | 0.00 | 0.00 | 37.05 | 4.57 |
6146 | 7934 | 4.385405 | GCTCCCAGACGCTGCACT | 62.385 | 66.667 | 0.00 | 0.00 | 0.00 | 4.40 |
6147 | 7935 | 3.006756 | GCTCCCAGACGCTGCACTA | 62.007 | 63.158 | 0.00 | 0.00 | 0.00 | 2.74 |
6148 | 7936 | 1.140589 | CTCCCAGACGCTGCACTAG | 59.859 | 63.158 | 0.00 | 0.00 | 0.00 | 2.57 |
6149 | 7937 | 1.599606 | CTCCCAGACGCTGCACTAGT | 61.600 | 60.000 | 0.00 | 0.00 | 0.00 | 2.57 |
6150 | 7938 | 1.446792 | CCCAGACGCTGCACTAGTG | 60.447 | 63.158 | 18.93 | 18.93 | 42.68 | 2.74 |
6163 | 7951 | 3.138205 | CACTAGTGCAACGTCTAGGAG | 57.862 | 52.381 | 10.54 | 2.94 | 45.86 | 3.69 |
6164 | 7952 | 1.473278 | ACTAGTGCAACGTCTAGGAGC | 59.527 | 52.381 | 12.28 | 1.27 | 45.86 | 4.70 |
6165 | 7953 | 1.746220 | CTAGTGCAACGTCTAGGAGCT | 59.254 | 52.381 | 0.00 | 0.00 | 45.86 | 4.09 |
6166 | 7954 | 1.835494 | AGTGCAACGTCTAGGAGCTA | 58.165 | 50.000 | 0.00 | 0.00 | 45.86 | 3.32 |
6167 | 7955 | 1.746220 | AGTGCAACGTCTAGGAGCTAG | 59.254 | 52.381 | 0.00 | 0.00 | 45.86 | 3.42 |
6168 | 7956 | 1.103803 | TGCAACGTCTAGGAGCTAGG | 58.896 | 55.000 | 0.00 | 0.00 | 35.03 | 3.02 |
6169 | 7957 | 0.249114 | GCAACGTCTAGGAGCTAGGC | 60.249 | 60.000 | 0.00 | 0.00 | 35.56 | 3.93 |
6184 | 7972 | 4.175787 | GCTAGGCGCTACATTGTATAGT | 57.824 | 45.455 | 7.64 | 0.00 | 35.14 | 2.12 |
6185 | 7973 | 3.921021 | GCTAGGCGCTACATTGTATAGTG | 59.079 | 47.826 | 7.64 | 0.00 | 35.14 | 2.74 |
6186 | 7974 | 4.558898 | GCTAGGCGCTACATTGTATAGTGT | 60.559 | 45.833 | 7.64 | 0.00 | 33.52 | 3.55 |
6187 | 7975 | 3.717707 | AGGCGCTACATTGTATAGTGTG | 58.282 | 45.455 | 7.64 | 0.00 | 33.52 | 3.82 |
6188 | 7976 | 2.800544 | GGCGCTACATTGTATAGTGTGG | 59.199 | 50.000 | 7.64 | 0.00 | 33.52 | 4.17 |
6189 | 7977 | 2.221055 | GCGCTACATTGTATAGTGTGGC | 59.779 | 50.000 | 12.15 | 12.15 | 45.70 | 5.01 |
6191 | 7979 | 2.221055 | GCTACATTGTATAGTGTGGCGC | 59.779 | 50.000 | 7.59 | 0.00 | 41.72 | 6.53 |
6192 | 7980 | 1.663695 | ACATTGTATAGTGTGGCGCC | 58.336 | 50.000 | 22.73 | 22.73 | 0.00 | 6.53 |
6193 | 7981 | 1.209504 | ACATTGTATAGTGTGGCGCCT | 59.790 | 47.619 | 29.70 | 9.99 | 0.00 | 5.52 |
6194 | 7982 | 2.432874 | ACATTGTATAGTGTGGCGCCTA | 59.567 | 45.455 | 29.70 | 14.39 | 0.00 | 3.93 |
6195 | 7983 | 2.882927 | TTGTATAGTGTGGCGCCTAG | 57.117 | 50.000 | 29.70 | 0.00 | 0.00 | 3.02 |
6208 | 7996 | 2.416678 | CCTAGCTCTCAGGCGCTG | 59.583 | 66.667 | 7.64 | 3.67 | 37.05 | 5.18 |
6209 | 7997 | 2.279385 | CTAGCTCTCAGGCGCTGC | 60.279 | 66.667 | 7.64 | 2.66 | 37.05 | 5.25 |
6210 | 7998 | 3.070576 | TAGCTCTCAGGCGCTGCA | 61.071 | 61.111 | 7.64 | 0.00 | 37.05 | 4.41 |
6211 | 7999 | 3.362399 | TAGCTCTCAGGCGCTGCAC | 62.362 | 63.158 | 7.64 | 0.00 | 37.05 | 4.57 |
6213 | 8001 | 3.117171 | CTCTCAGGCGCTGCACAC | 61.117 | 66.667 | 7.64 | 0.00 | 0.00 | 3.82 |
6214 | 8002 | 3.586461 | CTCTCAGGCGCTGCACACT | 62.586 | 63.158 | 7.64 | 0.00 | 0.00 | 3.55 |
6215 | 8003 | 3.420606 | CTCAGGCGCTGCACACTG | 61.421 | 66.667 | 7.64 | 4.89 | 0.00 | 3.66 |
6216 | 8004 | 3.871248 | CTCAGGCGCTGCACACTGA | 62.871 | 63.158 | 7.64 | 9.54 | 37.61 | 3.41 |
6217 | 8005 | 3.720193 | CAGGCGCTGCACACTGAC | 61.720 | 66.667 | 7.64 | 0.00 | 32.86 | 3.51 |
6218 | 8006 | 3.933722 | AGGCGCTGCACACTGACT | 61.934 | 61.111 | 7.64 | 0.00 | 0.00 | 3.41 |
6219 | 8007 | 2.974698 | GGCGCTGCACACTGACTT | 60.975 | 61.111 | 7.64 | 0.00 | 0.00 | 3.01 |
6220 | 8008 | 1.667830 | GGCGCTGCACACTGACTTA | 60.668 | 57.895 | 7.64 | 0.00 | 0.00 | 2.24 |
6221 | 8009 | 1.630244 | GGCGCTGCACACTGACTTAG | 61.630 | 60.000 | 7.64 | 0.00 | 0.00 | 2.18 |
6222 | 8010 | 0.946221 | GCGCTGCACACTGACTTAGT | 60.946 | 55.000 | 0.00 | 0.00 | 41.36 | 2.24 |
6223 | 8011 | 1.668919 | GCGCTGCACACTGACTTAGTA | 60.669 | 52.381 | 0.00 | 0.00 | 37.60 | 1.82 |
6224 | 8012 | 2.672714 | CGCTGCACACTGACTTAGTAA | 58.327 | 47.619 | 0.00 | 0.00 | 37.60 | 2.24 |
6225 | 8013 | 3.254060 | CGCTGCACACTGACTTAGTAAT | 58.746 | 45.455 | 0.00 | 0.00 | 37.60 | 1.89 |
6226 | 8014 | 3.679980 | CGCTGCACACTGACTTAGTAATT | 59.320 | 43.478 | 0.00 | 0.00 | 37.60 | 1.40 |
6227 | 8015 | 4.152402 | CGCTGCACACTGACTTAGTAATTT | 59.848 | 41.667 | 0.00 | 0.00 | 37.60 | 1.82 |
6228 | 8016 | 5.334105 | CGCTGCACACTGACTTAGTAATTTT | 60.334 | 40.000 | 0.00 | 0.00 | 37.60 | 1.82 |
6229 | 8017 | 6.080406 | GCTGCACACTGACTTAGTAATTTTC | 58.920 | 40.000 | 0.00 | 0.00 | 37.60 | 2.29 |
6230 | 8018 | 6.073003 | GCTGCACACTGACTTAGTAATTTTCT | 60.073 | 38.462 | 0.00 | 0.00 | 37.60 | 2.52 |
6231 | 8019 | 7.189693 | TGCACACTGACTTAGTAATTTTCTG | 57.810 | 36.000 | 0.00 | 0.00 | 37.60 | 3.02 |
6232 | 8020 | 6.989759 | TGCACACTGACTTAGTAATTTTCTGA | 59.010 | 34.615 | 0.00 | 0.00 | 37.60 | 3.27 |
6233 | 8021 | 7.661437 | TGCACACTGACTTAGTAATTTTCTGAT | 59.339 | 33.333 | 0.00 | 0.00 | 37.60 | 2.90 |
6234 | 8022 | 8.171840 | GCACACTGACTTAGTAATTTTCTGATC | 58.828 | 37.037 | 0.00 | 0.00 | 37.60 | 2.92 |
6235 | 8023 | 9.208022 | CACACTGACTTAGTAATTTTCTGATCA | 57.792 | 33.333 | 0.00 | 0.00 | 37.60 | 2.92 |
6236 | 8024 | 9.209175 | ACACTGACTTAGTAATTTTCTGATCAC | 57.791 | 33.333 | 0.00 | 0.00 | 37.60 | 3.06 |
6237 | 8025 | 9.208022 | CACTGACTTAGTAATTTTCTGATCACA | 57.792 | 33.333 | 0.00 | 0.00 | 37.60 | 3.58 |
6238 | 8026 | 9.209175 | ACTGACTTAGTAATTTTCTGATCACAC | 57.791 | 33.333 | 0.00 | 0.00 | 38.04 | 3.82 |
6239 | 8027 | 8.239681 | TGACTTAGTAATTTTCTGATCACACG | 57.760 | 34.615 | 0.00 | 0.00 | 0.00 | 4.49 |
6240 | 8028 | 7.330946 | TGACTTAGTAATTTTCTGATCACACGG | 59.669 | 37.037 | 0.00 | 0.00 | 0.00 | 4.94 |
6241 | 8029 | 6.594159 | ACTTAGTAATTTTCTGATCACACGGG | 59.406 | 38.462 | 0.00 | 0.00 | 0.00 | 5.28 |
6242 | 8030 | 4.906618 | AGTAATTTTCTGATCACACGGGT | 58.093 | 39.130 | 0.00 | 0.00 | 0.00 | 5.28 |
6243 | 8031 | 4.695455 | AGTAATTTTCTGATCACACGGGTG | 59.305 | 41.667 | 12.84 | 12.84 | 46.66 | 4.61 |
6244 | 8032 | 1.234821 | TTTTCTGATCACACGGGTGC | 58.765 | 50.000 | 14.50 | 0.00 | 44.87 | 5.01 |
6245 | 8033 | 0.948623 | TTTCTGATCACACGGGTGCG | 60.949 | 55.000 | 14.50 | 1.20 | 44.87 | 5.34 |
6246 | 8034 | 1.811645 | TTCTGATCACACGGGTGCGA | 61.812 | 55.000 | 14.50 | 3.83 | 44.87 | 5.10 |
6247 | 8035 | 2.048597 | TGATCACACGGGTGCGAC | 60.049 | 61.111 | 14.50 | 7.33 | 44.87 | 5.19 |
6248 | 8036 | 3.179265 | GATCACACGGGTGCGACG | 61.179 | 66.667 | 14.50 | 0.00 | 44.87 | 5.12 |
6259 | 8047 | 3.997397 | TGCGACGCTGGCCTTGTA | 61.997 | 61.111 | 22.08 | 0.00 | 0.00 | 2.41 |
6260 | 8048 | 3.188786 | GCGACGCTGGCCTTGTAG | 61.189 | 66.667 | 13.73 | 1.12 | 0.00 | 2.74 |
6261 | 8049 | 3.188786 | CGACGCTGGCCTTGTAGC | 61.189 | 66.667 | 3.32 | 2.95 | 36.60 | 3.58 |
6265 | 8053 | 4.785453 | GCTGGCCTTGTAGCGCCT | 62.785 | 66.667 | 2.29 | 0.00 | 45.90 | 5.52 |
6266 | 8054 | 2.900273 | CTGGCCTTGTAGCGCCTA | 59.100 | 61.111 | 2.29 | 0.00 | 45.90 | 3.93 |
6267 | 8055 | 1.447643 | CTGGCCTTGTAGCGCCTAT | 59.552 | 57.895 | 2.29 | 0.00 | 45.90 | 2.57 |
6268 | 8056 | 0.601311 | CTGGCCTTGTAGCGCCTATC | 60.601 | 60.000 | 2.29 | 0.00 | 45.90 | 2.08 |
6269 | 8057 | 1.048724 | TGGCCTTGTAGCGCCTATCT | 61.049 | 55.000 | 2.29 | 0.00 | 45.90 | 1.98 |
6270 | 8058 | 0.601311 | GGCCTTGTAGCGCCTATCTG | 60.601 | 60.000 | 2.29 | 0.00 | 42.21 | 2.90 |
6271 | 8059 | 0.105039 | GCCTTGTAGCGCCTATCTGT | 59.895 | 55.000 | 2.29 | 0.00 | 0.00 | 3.41 |
6272 | 8060 | 1.858091 | CCTTGTAGCGCCTATCTGTG | 58.142 | 55.000 | 2.29 | 0.00 | 0.00 | 3.66 |
6273 | 8061 | 1.409064 | CCTTGTAGCGCCTATCTGTGA | 59.591 | 52.381 | 2.29 | 0.00 | 0.00 | 3.58 |
6274 | 8062 | 2.544694 | CCTTGTAGCGCCTATCTGTGAG | 60.545 | 54.545 | 2.29 | 0.00 | 0.00 | 3.51 |
6275 | 8063 | 1.032794 | TGTAGCGCCTATCTGTGAGG | 58.967 | 55.000 | 2.29 | 0.00 | 37.12 | 3.86 |
6281 | 8069 | 2.682893 | CCTATCTGTGAGGCGTTGC | 58.317 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
6282 | 8070 | 0.108186 | CCTATCTGTGAGGCGTTGCA | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 4.08 |
6283 | 8071 | 1.002366 | CTATCTGTGAGGCGTTGCAC | 58.998 | 55.000 | 0.00 | 0.00 | 35.63 | 4.57 |
6284 | 8072 | 0.320050 | TATCTGTGAGGCGTTGCACA | 59.680 | 50.000 | 0.00 | 0.00 | 42.25 | 4.57 |
6286 | 8074 | 2.189257 | TGTGAGGCGTTGCACAGT | 59.811 | 55.556 | 0.00 | 0.00 | 39.86 | 3.55 |
6287 | 8075 | 2.179547 | TGTGAGGCGTTGCACAGTG | 61.180 | 57.895 | 0.00 | 0.00 | 39.86 | 3.66 |
6288 | 8076 | 2.180204 | GTGAGGCGTTGCACAGTGT | 61.180 | 57.895 | 1.61 | 0.00 | 35.19 | 3.55 |
6289 | 8077 | 0.878523 | GTGAGGCGTTGCACAGTGTA | 60.879 | 55.000 | 1.61 | 0.00 | 35.19 | 2.90 |
6290 | 8078 | 0.599991 | TGAGGCGTTGCACAGTGTAG | 60.600 | 55.000 | 1.61 | 0.00 | 0.00 | 2.74 |
6291 | 8079 | 0.600255 | GAGGCGTTGCACAGTGTAGT | 60.600 | 55.000 | 1.61 | 0.00 | 0.00 | 2.73 |
6292 | 8080 | 0.880278 | AGGCGTTGCACAGTGTAGTG | 60.880 | 55.000 | 1.61 | 0.00 | 42.37 | 2.74 |
6293 | 8081 | 1.157870 | GGCGTTGCACAGTGTAGTGT | 61.158 | 55.000 | 1.61 | 0.00 | 41.52 | 3.55 |
6295 | 8083 | 0.581529 | CGTTGCACAGTGTAGTGTGG | 59.418 | 55.000 | 18.52 | 1.81 | 46.73 | 4.17 |
6296 | 8084 | 0.307760 | GTTGCACAGTGTAGTGTGGC | 59.692 | 55.000 | 18.52 | 12.34 | 46.73 | 5.01 |
6297 | 8085 | 1.157257 | TTGCACAGTGTAGTGTGGCG | 61.157 | 55.000 | 18.52 | 0.00 | 46.73 | 5.69 |
6298 | 8086 | 2.954753 | GCACAGTGTAGTGTGGCGC | 61.955 | 63.158 | 18.52 | 0.00 | 46.73 | 6.53 |
6299 | 8087 | 2.030562 | ACAGTGTAGTGTGGCGCC | 59.969 | 61.111 | 22.73 | 22.73 | 0.00 | 6.53 |
6300 | 8088 | 2.343758 | CAGTGTAGTGTGGCGCCT | 59.656 | 61.111 | 29.70 | 9.99 | 0.00 | 5.52 |
6301 | 8089 | 1.301716 | CAGTGTAGTGTGGCGCCTT | 60.302 | 57.895 | 29.70 | 13.03 | 0.00 | 4.35 |
6302 | 8090 | 1.004918 | AGTGTAGTGTGGCGCCTTC | 60.005 | 57.895 | 29.70 | 20.58 | 0.00 | 3.46 |
6303 | 8091 | 2.048597 | TGTAGTGTGGCGCCTTCG | 60.049 | 61.111 | 29.70 | 0.00 | 39.07 | 3.79 |
6304 | 8092 | 2.048503 | GTAGTGTGGCGCCTTCGT | 60.049 | 61.111 | 29.70 | 12.53 | 38.14 | 3.85 |
6305 | 8093 | 2.048597 | TAGTGTGGCGCCTTCGTG | 60.049 | 61.111 | 29.70 | 0.00 | 38.14 | 4.35 |
6306 | 8094 | 2.863346 | TAGTGTGGCGCCTTCGTGT | 61.863 | 57.895 | 29.70 | 9.85 | 38.14 | 4.49 |
6307 | 8095 | 2.758770 | TAGTGTGGCGCCTTCGTGTC | 62.759 | 60.000 | 29.70 | 10.72 | 38.14 | 3.67 |
6315 | 8103 | 4.351938 | CCTTCGTGTCGGGCGTCA | 62.352 | 66.667 | 0.00 | 0.00 | 0.00 | 4.35 |
6316 | 8104 | 3.103911 | CTTCGTGTCGGGCGTCAC | 61.104 | 66.667 | 0.00 | 0.00 | 0.00 | 3.67 |
6317 | 8105 | 3.834447 | CTTCGTGTCGGGCGTCACA | 62.834 | 63.158 | 0.00 | 0.00 | 34.69 | 3.58 |
6318 | 8106 | 4.634133 | TCGTGTCGGGCGTCACAC | 62.634 | 66.667 | 0.75 | 0.75 | 39.70 | 3.82 |
6319 | 8107 | 4.934942 | CGTGTCGGGCGTCACACA | 62.935 | 66.667 | 10.72 | 0.00 | 42.67 | 3.72 |
6320 | 8108 | 2.586635 | GTGTCGGGCGTCACACAA | 60.587 | 61.111 | 5.81 | 0.00 | 42.20 | 3.33 |
6321 | 8109 | 2.174969 | GTGTCGGGCGTCACACAAA | 61.175 | 57.895 | 5.81 | 0.00 | 42.20 | 2.83 |
6322 | 8110 | 1.449778 | TGTCGGGCGTCACACAAAA | 60.450 | 52.632 | 0.00 | 0.00 | 0.00 | 2.44 |
6323 | 8111 | 1.025113 | TGTCGGGCGTCACACAAAAA | 61.025 | 50.000 | 0.00 | 0.00 | 0.00 | 1.94 |
6324 | 8112 | 0.316689 | GTCGGGCGTCACACAAAAAG | 60.317 | 55.000 | 0.00 | 0.00 | 0.00 | 2.27 |
6325 | 8113 | 1.008995 | CGGGCGTCACACAAAAAGG | 60.009 | 57.895 | 0.00 | 0.00 | 0.00 | 3.11 |
6326 | 8114 | 1.720694 | CGGGCGTCACACAAAAAGGT | 61.721 | 55.000 | 0.00 | 0.00 | 0.00 | 3.50 |
6327 | 8115 | 0.030235 | GGGCGTCACACAAAAAGGTC | 59.970 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
6328 | 8116 | 0.736053 | GGCGTCACACAAAAAGGTCA | 59.264 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
6329 | 8117 | 1.268539 | GGCGTCACACAAAAAGGTCAG | 60.269 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
6330 | 8118 | 1.859998 | GCGTCACACAAAAAGGTCAGC | 60.860 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
6331 | 8119 | 1.268539 | CGTCACACAAAAAGGTCAGCC | 60.269 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
6332 | 8120 | 1.021202 | TCACACAAAAAGGTCAGCCG | 58.979 | 50.000 | 0.00 | 0.00 | 40.50 | 5.52 |
6333 | 8121 | 0.594796 | CACACAAAAAGGTCAGCCGC | 60.595 | 55.000 | 0.00 | 0.00 | 40.50 | 6.53 |
6334 | 8122 | 1.370414 | CACAAAAAGGTCAGCCGCG | 60.370 | 57.895 | 0.00 | 0.00 | 40.50 | 6.46 |
6335 | 8123 | 1.822186 | ACAAAAAGGTCAGCCGCGT | 60.822 | 52.632 | 4.92 | 0.00 | 40.50 | 6.01 |
6336 | 8124 | 1.370414 | CAAAAAGGTCAGCCGCGTG | 60.370 | 57.895 | 4.92 | 0.00 | 40.50 | 5.34 |
6337 | 8125 | 1.525077 | AAAAAGGTCAGCCGCGTGA | 60.525 | 52.632 | 4.92 | 0.00 | 40.50 | 4.35 |
6338 | 8126 | 1.098712 | AAAAAGGTCAGCCGCGTGAA | 61.099 | 50.000 | 4.92 | 0.00 | 40.50 | 3.18 |
6339 | 8127 | 1.098712 | AAAAGGTCAGCCGCGTGAAA | 61.099 | 50.000 | 4.92 | 0.00 | 40.50 | 2.69 |
6340 | 8128 | 0.889186 | AAAGGTCAGCCGCGTGAAAT | 60.889 | 50.000 | 4.92 | 0.00 | 40.50 | 2.17 |
6341 | 8129 | 0.036765 | AAGGTCAGCCGCGTGAAATA | 60.037 | 50.000 | 4.92 | 0.00 | 40.50 | 1.40 |
6342 | 8130 | 0.460284 | AGGTCAGCCGCGTGAAATAG | 60.460 | 55.000 | 4.92 | 0.00 | 40.50 | 1.73 |
6343 | 8131 | 0.739813 | GGTCAGCCGCGTGAAATAGT | 60.740 | 55.000 | 4.92 | 0.00 | 0.00 | 2.12 |
6344 | 8132 | 1.076332 | GTCAGCCGCGTGAAATAGTT | 58.924 | 50.000 | 4.92 | 0.00 | 0.00 | 2.24 |
6345 | 8133 | 1.463444 | GTCAGCCGCGTGAAATAGTTT | 59.537 | 47.619 | 4.92 | 0.00 | 0.00 | 2.66 |
6346 | 8134 | 1.730064 | TCAGCCGCGTGAAATAGTTTC | 59.270 | 47.619 | 4.92 | 0.00 | 40.08 | 2.78 |
6347 | 8135 | 1.463056 | CAGCCGCGTGAAATAGTTTCA | 59.537 | 47.619 | 4.92 | 1.24 | 46.68 | 2.69 |
6360 | 8148 | 8.786826 | TGAAATAGTTTCACGGATAGTTCATT | 57.213 | 30.769 | 1.24 | 0.00 | 44.21 | 2.57 |
6361 | 8149 | 8.879759 | TGAAATAGTTTCACGGATAGTTCATTC | 58.120 | 33.333 | 1.24 | 0.00 | 44.21 | 2.67 |
6362 | 8150 | 9.099454 | GAAATAGTTTCACGGATAGTTCATTCT | 57.901 | 33.333 | 0.00 | 0.00 | 39.45 | 2.40 |
6363 | 8151 | 8.425577 | AATAGTTTCACGGATAGTTCATTCTG | 57.574 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
6364 | 8152 | 5.794894 | AGTTTCACGGATAGTTCATTCTGT | 58.205 | 37.500 | 0.00 | 0.00 | 31.63 | 3.41 |
6365 | 8153 | 5.639506 | AGTTTCACGGATAGTTCATTCTGTG | 59.360 | 40.000 | 5.70 | 5.70 | 46.17 | 3.66 |
6370 | 8158 | 6.668541 | ACGGATAGTTCATTCTGTGATTTG | 57.331 | 37.500 | 0.00 | 0.00 | 36.54 | 2.32 |
6371 | 8159 | 6.406370 | ACGGATAGTTCATTCTGTGATTTGA | 58.594 | 36.000 | 0.00 | 0.00 | 36.54 | 2.69 |
6372 | 8160 | 7.050377 | ACGGATAGTTCATTCTGTGATTTGAT | 58.950 | 34.615 | 0.00 | 0.00 | 36.54 | 2.57 |
6373 | 8161 | 7.554118 | ACGGATAGTTCATTCTGTGATTTGATT | 59.446 | 33.333 | 0.00 | 0.00 | 36.54 | 2.57 |
6374 | 8162 | 8.400947 | CGGATAGTTCATTCTGTGATTTGATTT | 58.599 | 33.333 | 0.00 | 0.00 | 36.54 | 2.17 |
6378 | 8166 | 8.807667 | AGTTCATTCTGTGATTTGATTTTGTC | 57.192 | 30.769 | 0.00 | 0.00 | 36.54 | 3.18 |
6379 | 8167 | 8.636213 | AGTTCATTCTGTGATTTGATTTTGTCT | 58.364 | 29.630 | 0.00 | 0.00 | 36.54 | 3.41 |
6380 | 8168 | 9.897744 | GTTCATTCTGTGATTTGATTTTGTCTA | 57.102 | 29.630 | 0.00 | 0.00 | 36.54 | 2.59 |
6385 | 8173 | 9.739276 | TTCTGTGATTTGATTTTGTCTATAGGT | 57.261 | 29.630 | 0.00 | 0.00 | 0.00 | 3.08 |
6386 | 8174 | 9.383519 | TCTGTGATTTGATTTTGTCTATAGGTC | 57.616 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
6387 | 8175 | 9.166173 | CTGTGATTTGATTTTGTCTATAGGTCA | 57.834 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
6388 | 8176 | 9.513906 | TGTGATTTGATTTTGTCTATAGGTCAA | 57.486 | 29.630 | 0.00 | 3.83 | 0.00 | 3.18 |
6413 | 8201 | 6.654793 | TTTATCAAATTTGCCGCAATAACC | 57.345 | 33.333 | 13.54 | 0.00 | 0.00 | 2.85 |
6503 | 8291 | 2.158475 | ACAGGCCTCAATGAAAGACCAA | 60.158 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
6589 | 8377 | 6.524734 | TCCATTCTTGTGTATACTGGCATAG | 58.475 | 40.000 | 4.17 | 2.83 | 0.00 | 2.23 |
6622 | 8410 | 5.046159 | AGTTCCGGTGGAGTAATGTCAATTA | 60.046 | 40.000 | 0.00 | 0.00 | 31.21 | 1.40 |
6712 | 8501 | 5.073008 | TGCCTGGCTTCAGTATTGGATTATA | 59.927 | 40.000 | 21.03 | 0.00 | 36.81 | 0.98 |
6876 | 8672 | 5.791336 | AGAGAACCAATGCATATCTCGTA | 57.209 | 39.130 | 18.32 | 0.00 | 41.04 | 3.43 |
6877 | 8673 | 6.352016 | AGAGAACCAATGCATATCTCGTAT | 57.648 | 37.500 | 18.32 | 6.29 | 41.04 | 3.06 |
6881 | 8677 | 6.870965 | AGAACCAATGCATATCTCGTATTCTC | 59.129 | 38.462 | 0.00 | 0.00 | 0.00 | 2.87 |
6884 | 8680 | 5.635280 | CCAATGCATATCTCGTATTCTCGTT | 59.365 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
6896 | 8692 | 3.900966 | ATTCTCGTTAGGTACAACCCC | 57.099 | 47.619 | 0.00 | 0.00 | 39.75 | 4.95 |
6904 | 8700 | 2.315720 | AGGTACAACCCCTCGTACTT | 57.684 | 50.000 | 0.00 | 0.00 | 39.75 | 2.24 |
6924 | 8720 | 7.095732 | CGTACTTCCTCTGTTTCTTTTTACTCC | 60.096 | 40.741 | 0.00 | 0.00 | 0.00 | 3.85 |
6930 | 8730 | 6.037830 | CCTCTGTTTCTTTTTACTCCGTTTGA | 59.962 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
6938 | 8738 | 7.636326 | TCTTTTTACTCCGTTTGATCAAAGTC | 58.364 | 34.615 | 21.05 | 9.65 | 0.00 | 3.01 |
6948 | 8748 | 5.743026 | TTTGATCAAAGTCAAACTACGCA | 57.257 | 34.783 | 16.91 | 0.00 | 41.70 | 5.24 |
7047 | 8847 | 8.873186 | TCATGGTGCATCTGATAATATTGATT | 57.127 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
7050 | 8850 | 7.809665 | TGGTGCATCTGATAATATTGATTTCG | 58.190 | 34.615 | 0.00 | 0.00 | 0.00 | 3.46 |
7128 | 8928 | 5.123186 | TGACTTTGACCAAACCTTATATGCG | 59.877 | 40.000 | 0.00 | 0.00 | 0.00 | 4.73 |
7211 | 9245 | 9.926751 | GAATATTATTCTGCATGAACGGATATG | 57.073 | 33.333 | 8.83 | 0.00 | 37.52 | 1.78 |
7219 | 9253 | 6.821160 | TCTGCATGAACGGATATGAAGTTTTA | 59.179 | 34.615 | 0.00 | 0.00 | 32.73 | 1.52 |
7246 | 9928 | 0.468648 | CCCTCCCTCCGTTCCATAAC | 59.531 | 60.000 | 0.00 | 0.00 | 0.00 | 1.89 |
7278 | 9960 | 8.429739 | TTGCGTATAGAATTTTTGAAAAGTCG | 57.570 | 30.769 | 9.98 | 2.10 | 44.87 | 4.18 |
7290 | 9972 | 2.920490 | TGAAAAGTCGTGCTTTGCAAAC | 59.080 | 40.909 | 8.05 | 6.31 | 46.76 | 2.93 |
7472 | 11375 | 3.861840 | TGCACTACATTAGAGCAACTCC | 58.138 | 45.455 | 3.22 | 0.00 | 46.69 | 3.85 |
7473 | 11376 | 3.260632 | TGCACTACATTAGAGCAACTCCA | 59.739 | 43.478 | 3.22 | 0.00 | 46.69 | 3.86 |
7475 | 11378 | 4.878397 | GCACTACATTAGAGCAACTCCAAT | 59.122 | 41.667 | 0.00 | 0.00 | 41.25 | 3.16 |
7476 | 11379 | 5.220739 | GCACTACATTAGAGCAACTCCAATG | 60.221 | 44.000 | 12.30 | 12.30 | 42.34 | 2.82 |
7478 | 11381 | 6.257411 | CACTACATTAGAGCAACTCCAATGAG | 59.743 | 42.308 | 18.40 | 13.88 | 40.30 | 2.90 |
7479 | 11382 | 4.521146 | ACATTAGAGCAACTCCAATGAGG | 58.479 | 43.478 | 18.40 | 0.00 | 40.30 | 3.86 |
7480 | 11383 | 2.698855 | TAGAGCAACTCCAATGAGGC | 57.301 | 50.000 | 0.00 | 0.00 | 43.29 | 4.70 |
7481 | 11384 | 0.392193 | AGAGCAACTCCAATGAGGCG | 60.392 | 55.000 | 0.00 | 0.00 | 43.29 | 5.52 |
7482 | 11385 | 0.391661 | GAGCAACTCCAATGAGGCGA | 60.392 | 55.000 | 0.00 | 0.00 | 43.29 | 5.54 |
7483 | 11386 | 0.674895 | AGCAACTCCAATGAGGCGAC | 60.675 | 55.000 | 0.00 | 0.00 | 43.29 | 5.19 |
7484 | 11387 | 1.648467 | GCAACTCCAATGAGGCGACC | 61.648 | 60.000 | 0.00 | 0.00 | 43.29 | 4.79 |
7485 | 11388 | 1.026718 | CAACTCCAATGAGGCGACCC | 61.027 | 60.000 | 0.00 | 0.00 | 43.29 | 4.46 |
7486 | 11389 | 1.488705 | AACTCCAATGAGGCGACCCA | 61.489 | 55.000 | 0.00 | 0.00 | 43.29 | 4.51 |
7487 | 11390 | 1.299648 | CTCCAATGAGGCGACCCAA | 59.700 | 57.895 | 0.00 | 0.00 | 37.29 | 4.12 |
7488 | 11391 | 0.322456 | CTCCAATGAGGCGACCCAAA | 60.322 | 55.000 | 0.00 | 0.00 | 37.29 | 3.28 |
7489 | 11392 | 0.608035 | TCCAATGAGGCGACCCAAAC | 60.608 | 55.000 | 0.00 | 0.00 | 37.29 | 2.93 |
7490 | 11393 | 1.501741 | CAATGAGGCGACCCAAACG | 59.498 | 57.895 | 0.00 | 0.00 | 0.00 | 3.60 |
7491 | 11394 | 0.953471 | CAATGAGGCGACCCAAACGA | 60.953 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
7492 | 11395 | 0.250553 | AATGAGGCGACCCAAACGAA | 60.251 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
7493 | 11396 | 0.953960 | ATGAGGCGACCCAAACGAAC | 60.954 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
7494 | 11397 | 2.663852 | AGGCGACCCAAACGAACG | 60.664 | 61.111 | 0.00 | 0.00 | 0.00 | 3.95 |
7495 | 11398 | 4.379143 | GGCGACCCAAACGAACGC | 62.379 | 66.667 | 0.00 | 0.00 | 46.79 | 4.84 |
7496 | 11399 | 3.343421 | GCGACCCAAACGAACGCT | 61.343 | 61.111 | 0.00 | 0.00 | 44.67 | 5.07 |
7497 | 11400 | 2.549282 | CGACCCAAACGAACGCTG | 59.451 | 61.111 | 0.00 | 0.00 | 0.00 | 5.18 |
7498 | 11401 | 2.241880 | CGACCCAAACGAACGCTGT | 61.242 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
7499 | 11402 | 1.768112 | CGACCCAAACGAACGCTGTT | 61.768 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
7500 | 11403 | 0.379316 | GACCCAAACGAACGCTGTTT | 59.621 | 50.000 | 0.00 | 0.00 | 40.01 | 2.83 |
7501 | 11404 | 0.812549 | ACCCAAACGAACGCTGTTTT | 59.187 | 45.000 | 0.00 | 0.00 | 37.44 | 2.43 |
7502 | 11405 | 1.202817 | ACCCAAACGAACGCTGTTTTT | 59.797 | 42.857 | 0.00 | 0.00 | 37.44 | 1.94 |
7503 | 11406 | 1.586123 | CCCAAACGAACGCTGTTTTTG | 59.414 | 47.619 | 0.00 | 9.59 | 37.44 | 2.44 |
7504 | 11407 | 2.255316 | CCAAACGAACGCTGTTTTTGT | 58.745 | 42.857 | 12.88 | 4.66 | 37.44 | 2.83 |
7505 | 11408 | 2.277834 | CCAAACGAACGCTGTTTTTGTC | 59.722 | 45.455 | 12.88 | 0.00 | 37.44 | 3.18 |
7506 | 11409 | 2.182904 | AACGAACGCTGTTTTTGTCC | 57.817 | 45.000 | 0.00 | 0.00 | 0.00 | 4.02 |
7507 | 11410 | 1.375551 | ACGAACGCTGTTTTTGTCCT | 58.624 | 45.000 | 0.00 | 0.00 | 0.00 | 3.85 |
7508 | 11411 | 1.741145 | ACGAACGCTGTTTTTGTCCTT | 59.259 | 42.857 | 0.00 | 0.00 | 0.00 | 3.36 |
7509 | 11412 | 2.162809 | ACGAACGCTGTTTTTGTCCTTT | 59.837 | 40.909 | 0.00 | 0.00 | 0.00 | 3.11 |
7510 | 11413 | 3.175929 | CGAACGCTGTTTTTGTCCTTTT | 58.824 | 40.909 | 0.00 | 0.00 | 0.00 | 2.27 |
7511 | 11414 | 3.610677 | CGAACGCTGTTTTTGTCCTTTTT | 59.389 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
7512 | 11415 | 4.794246 | CGAACGCTGTTTTTGTCCTTTTTA | 59.206 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
7513 | 11416 | 5.457473 | CGAACGCTGTTTTTGTCCTTTTTAT | 59.543 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
7514 | 11417 | 6.344702 | CGAACGCTGTTTTTGTCCTTTTTATC | 60.345 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
7515 | 11418 | 5.286438 | ACGCTGTTTTTGTCCTTTTTATCC | 58.714 | 37.500 | 0.00 | 0.00 | 0.00 | 2.59 |
7516 | 11419 | 4.381566 | CGCTGTTTTTGTCCTTTTTATCCG | 59.618 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
7517 | 11420 | 5.286438 | GCTGTTTTTGTCCTTTTTATCCGT | 58.714 | 37.500 | 0.00 | 0.00 | 0.00 | 4.69 |
7518 | 11421 | 5.751509 | GCTGTTTTTGTCCTTTTTATCCGTT | 59.248 | 36.000 | 0.00 | 0.00 | 0.00 | 4.44 |
7519 | 11422 | 6.074516 | GCTGTTTTTGTCCTTTTTATCCGTTC | 60.075 | 38.462 | 0.00 | 0.00 | 0.00 | 3.95 |
7520 | 11423 | 5.972382 | TGTTTTTGTCCTTTTTATCCGTTCG | 59.028 | 36.000 | 0.00 | 0.00 | 0.00 | 3.95 |
7521 | 11424 | 4.752661 | TTTGTCCTTTTTATCCGTTCGG | 57.247 | 40.909 | 4.74 | 4.74 | 0.00 | 4.30 |
7522 | 11425 | 2.702261 | TGTCCTTTTTATCCGTTCGGG | 58.298 | 47.619 | 11.37 | 0.00 | 37.02 | 5.14 |
7523 | 11426 | 2.038820 | TGTCCTTTTTATCCGTTCGGGT | 59.961 | 45.455 | 11.37 | 6.83 | 37.00 | 5.28 |
7524 | 11427 | 2.674852 | GTCCTTTTTATCCGTTCGGGTC | 59.325 | 50.000 | 11.37 | 0.00 | 37.00 | 4.46 |
7525 | 11428 | 1.662122 | CCTTTTTATCCGTTCGGGTCG | 59.338 | 52.381 | 11.37 | 0.00 | 37.00 | 4.79 |
7526 | 11429 | 1.061566 | CTTTTTATCCGTTCGGGTCGC | 59.938 | 52.381 | 11.37 | 0.00 | 37.00 | 5.19 |
7527 | 11430 | 0.740516 | TTTTATCCGTTCGGGTCGCC | 60.741 | 55.000 | 11.37 | 0.00 | 37.00 | 5.54 |
7528 | 11431 | 2.576643 | TTTATCCGTTCGGGTCGCCC | 62.577 | 60.000 | 11.37 | 4.96 | 41.09 | 6.13 |
7543 | 11446 | 3.066190 | CCCGTCCGCCTGTCTGTA | 61.066 | 66.667 | 0.00 | 0.00 | 0.00 | 2.74 |
7544 | 11447 | 2.423898 | CCCGTCCGCCTGTCTGTAT | 61.424 | 63.158 | 0.00 | 0.00 | 0.00 | 2.29 |
7545 | 11448 | 1.065928 | CCGTCCGCCTGTCTGTATC | 59.934 | 63.158 | 0.00 | 0.00 | 0.00 | 2.24 |
7546 | 11449 | 1.065928 | CGTCCGCCTGTCTGTATCC | 59.934 | 63.158 | 0.00 | 0.00 | 0.00 | 2.59 |
7547 | 11450 | 1.065928 | GTCCGCCTGTCTGTATCCG | 59.934 | 63.158 | 0.00 | 0.00 | 0.00 | 4.18 |
7548 | 11451 | 1.379443 | TCCGCCTGTCTGTATCCGT | 60.379 | 57.895 | 0.00 | 0.00 | 0.00 | 4.69 |
7549 | 11452 | 0.968901 | TCCGCCTGTCTGTATCCGTT | 60.969 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
7550 | 11453 | 0.108329 | CCGCCTGTCTGTATCCGTTT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.60 |
7551 | 11454 | 1.674817 | CCGCCTGTCTGTATCCGTTTT | 60.675 | 52.381 | 0.00 | 0.00 | 0.00 | 2.43 |
7552 | 11455 | 2.073816 | CGCCTGTCTGTATCCGTTTTT | 58.926 | 47.619 | 0.00 | 0.00 | 0.00 | 1.94 |
7567 | 11470 | 1.437986 | TTTTTGTTTGGGTCGGCCG | 59.562 | 52.632 | 22.12 | 22.12 | 34.97 | 6.13 |
7568 | 11471 | 2.017559 | TTTTTGTTTGGGTCGGCCGG | 62.018 | 55.000 | 27.83 | 6.80 | 34.97 | 6.13 |
7569 | 11472 | 3.717924 | TTTGTTTGGGTCGGCCGGT | 62.718 | 57.895 | 27.83 | 0.00 | 34.97 | 5.28 |
7570 | 11473 | 4.939368 | TGTTTGGGTCGGCCGGTG | 62.939 | 66.667 | 27.83 | 0.00 | 34.97 | 4.94 |
7571 | 11474 | 4.629523 | GTTTGGGTCGGCCGGTGA | 62.630 | 66.667 | 27.83 | 2.10 | 34.97 | 4.02 |
7572 | 11475 | 4.323477 | TTTGGGTCGGCCGGTGAG | 62.323 | 66.667 | 27.83 | 0.00 | 34.97 | 3.51 |
7584 | 11487 | 3.056328 | GGTGAGCCCAACGGAAGC | 61.056 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
7585 | 11488 | 3.423154 | GTGAGCCCAACGGAAGCG | 61.423 | 66.667 | 0.00 | 0.00 | 0.00 | 4.68 |
7586 | 11489 | 3.621805 | TGAGCCCAACGGAAGCGA | 61.622 | 61.111 | 0.00 | 0.00 | 0.00 | 4.93 |
7587 | 11490 | 2.815647 | GAGCCCAACGGAAGCGAG | 60.816 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
7588 | 11491 | 3.296709 | GAGCCCAACGGAAGCGAGA | 62.297 | 63.158 | 0.00 | 0.00 | 0.00 | 4.04 |
7589 | 11492 | 3.119096 | GCCCAACGGAAGCGAGAC | 61.119 | 66.667 | 0.00 | 0.00 | 0.00 | 3.36 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
8 | 9 | 2.527487 | CGCATATTGAAGACGCTTTTGC | 59.473 | 45.455 | 0.00 | 0.00 | 43.23 | 3.68 |
9 | 10 | 3.100817 | CCGCATATTGAAGACGCTTTTG | 58.899 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
42 | 43 | 2.125633 | GGAACTCGAAGGTCCCGC | 60.126 | 66.667 | 7.50 | 0.00 | 46.52 | 6.13 |
63 | 64 | 3.123804 | GCCCAATATGCGATACTATCCG | 58.876 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
85 | 86 | 0.317160 | TCCGACATCCACACTGTCAC | 59.683 | 55.000 | 4.53 | 0.00 | 42.52 | 3.67 |
91 | 92 | 1.741770 | GCCACTCCGACATCCACAC | 60.742 | 63.158 | 0.00 | 0.00 | 0.00 | 3.82 |
220 | 221 | 4.963352 | CGAAAACCGTTACAAAACACCTAC | 59.037 | 41.667 | 0.00 | 0.00 | 35.16 | 3.18 |
221 | 222 | 5.154215 | CGAAAACCGTTACAAAACACCTA | 57.846 | 39.130 | 0.00 | 0.00 | 35.16 | 3.08 |
222 | 223 | 4.018649 | CGAAAACCGTTACAAAACACCT | 57.981 | 40.909 | 0.00 | 0.00 | 35.16 | 4.00 |
249 | 251 | 2.818432 | TGCCCGGCTAATTAACGAAAAA | 59.182 | 40.909 | 11.61 | 0.00 | 0.00 | 1.94 |
291 | 293 | 9.699410 | AAATACAACCATCTCCTCATTTATTCA | 57.301 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
376 | 378 | 1.404717 | GCAATCTCTCAAGCTGGTCGA | 60.405 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
436 | 442 | 1.700042 | CCCTGGTGAGCTGGGGATAC | 61.700 | 65.000 | 17.74 | 0.00 | 41.25 | 2.24 |
442 | 448 | 1.073923 | ACTTTAACCCTGGTGAGCTGG | 59.926 | 52.381 | 0.00 | 0.09 | 0.00 | 4.85 |
536 | 543 | 1.081094 | TAGTCGACGCGAACATCTCA | 58.919 | 50.000 | 15.93 | 0.00 | 37.72 | 3.27 |
578 | 585 | 4.885907 | CCTATGAGCACTTGGAACATTGAT | 59.114 | 41.667 | 0.00 | 0.00 | 39.30 | 2.57 |
584 | 591 | 2.789409 | ACCCTATGAGCACTTGGAAC | 57.211 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
815 | 1118 | 4.308458 | CCGCGTTGGGGACTCACA | 62.308 | 66.667 | 4.92 | 0.00 | 37.91 | 3.58 |
1046 | 2030 | 3.728474 | GGCGATAGAGGTCGACGA | 58.272 | 61.111 | 9.92 | 0.00 | 44.06 | 4.20 |
1296 | 2280 | 2.970324 | GCGTCGTGCCAGGTGAAA | 60.970 | 61.111 | 0.00 | 0.00 | 37.76 | 2.69 |
1428 | 2412 | 1.686110 | GGTCCTGATCCCCACGTCT | 60.686 | 63.158 | 0.00 | 0.00 | 0.00 | 4.18 |
1596 | 2580 | 1.911057 | TCTCGAAGAAGCACTCCTGA | 58.089 | 50.000 | 0.00 | 0.00 | 34.09 | 3.86 |
1769 | 2762 | 8.070171 | GGCTGCTAATTATAGTGTGTTTGTATG | 58.930 | 37.037 | 0.00 | 0.00 | 0.00 | 2.39 |
1927 | 3258 | 6.058183 | ACTTAATCAGGGCATGAGTTATCAC | 58.942 | 40.000 | 7.60 | 0.00 | 42.53 | 3.06 |
1937 | 3268 | 7.494922 | AAACCAAATAACTTAATCAGGGCAT | 57.505 | 32.000 | 0.00 | 0.00 | 0.00 | 4.40 |
1976 | 3320 | 8.274322 | TGGGAAGTCAATCATACATTATTGTCT | 58.726 | 33.333 | 0.00 | 0.00 | 37.28 | 3.41 |
1983 | 3330 | 5.121380 | AGCTGGGAAGTCAATCATACATT | 57.879 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
1993 | 3340 | 2.091885 | ACAAAGGAAAGCTGGGAAGTCA | 60.092 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
1996 | 3343 | 2.816672 | GAGACAAAGGAAAGCTGGGAAG | 59.183 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2037 | 3384 | 2.751806 | GAGACAAAGGAAAGCTGGGATG | 59.248 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2038 | 3385 | 2.376518 | TGAGACAAAGGAAAGCTGGGAT | 59.623 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
2039 | 3386 | 1.774254 | TGAGACAAAGGAAAGCTGGGA | 59.226 | 47.619 | 0.00 | 0.00 | 0.00 | 4.37 |
2040 | 3387 | 2.276732 | TGAGACAAAGGAAAGCTGGG | 57.723 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
2041 | 3388 | 6.521151 | AAATATGAGACAAAGGAAAGCTGG | 57.479 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
2170 | 3525 | 2.892215 | TGGCACATCTGAAATCAAAGCA | 59.108 | 40.909 | 0.00 | 0.00 | 0.00 | 3.91 |
2171 | 3526 | 3.581024 | TGGCACATCTGAAATCAAAGC | 57.419 | 42.857 | 0.00 | 0.00 | 0.00 | 3.51 |
2344 | 3707 | 5.123936 | TCTTGCTGATGAAGATCCAATGAG | 58.876 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
3094 | 4457 | 3.325870 | TCGTTCGATCAAAGCATCACTT | 58.674 | 40.909 | 0.00 | 0.00 | 41.70 | 3.16 |
3576 | 4941 | 0.111253 | AGCCTCACAACAGGAAAGGG | 59.889 | 55.000 | 0.00 | 0.00 | 35.20 | 3.95 |
3648 | 5014 | 5.720371 | ATACAGCAGCAGAGGATTACTAG | 57.280 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
3657 | 5023 | 3.671928 | GCAAACAAAATACAGCAGCAGAG | 59.328 | 43.478 | 0.00 | 0.00 | 0.00 | 3.35 |
3662 | 5028 | 4.616802 | CGGTTAGCAAACAAAATACAGCAG | 59.383 | 41.667 | 0.00 | 0.00 | 37.34 | 4.24 |
3717 | 5083 | 1.673168 | GTCATCACCAAGATCAGGCC | 58.327 | 55.000 | 0.00 | 0.00 | 33.72 | 5.19 |
3751 | 5117 | 9.399797 | TGACAGCTAGAATATTCACATGAAAAT | 57.600 | 29.630 | 17.56 | 0.98 | 37.61 | 1.82 |
3800 | 5166 | 7.523293 | TTCAACTTGAAGAAGGATTGCATAA | 57.477 | 32.000 | 0.00 | 0.00 | 31.83 | 1.90 |
4072 | 5514 | 9.696917 | CAAACTAAAAGCAAGGTTCTCATTAAT | 57.303 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
4140 | 5582 | 4.652822 | GACAGGTTGAGGTGGAAGTTAAT | 58.347 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
4182 | 5624 | 5.463061 | CACCAAATTTGAAAAGCGAAGTCAT | 59.537 | 36.000 | 19.86 | 0.00 | 0.00 | 3.06 |
4199 | 5641 | 3.511146 | CAGTTATGCAAGGACCACCAAAT | 59.489 | 43.478 | 0.00 | 0.00 | 38.94 | 2.32 |
4252 | 5694 | 9.453572 | AGAAAACATCACAGACATGTTACATAT | 57.546 | 29.630 | 0.00 | 0.00 | 42.47 | 1.78 |
4275 | 5717 | 9.337396 | ACACAAAATCAATGTAGAGTTGTAGAA | 57.663 | 29.630 | 0.00 | 0.00 | 31.97 | 2.10 |
4510 | 5953 | 4.280677 | CAGAACAAAATTTGTCCCAGGCTA | 59.719 | 41.667 | 12.11 | 0.00 | 44.59 | 3.93 |
4511 | 5954 | 3.070015 | CAGAACAAAATTTGTCCCAGGCT | 59.930 | 43.478 | 12.11 | 0.00 | 44.59 | 4.58 |
4512 | 5955 | 3.392882 | CAGAACAAAATTTGTCCCAGGC | 58.607 | 45.455 | 12.11 | 0.00 | 44.59 | 4.85 |
4644 | 6417 | 9.471084 | TGCAAATCATTGATGCTTCTAAATATG | 57.529 | 29.630 | 12.20 | 0.00 | 40.66 | 1.78 |
4672 | 6445 | 6.158598 | GTCTTGCTTTCTTTGCCAATATTGA | 58.841 | 36.000 | 17.23 | 0.00 | 0.00 | 2.57 |
5058 | 6834 | 5.316987 | AGTGGTCAAAGGGAGAACATAAAG | 58.683 | 41.667 | 0.00 | 0.00 | 34.81 | 1.85 |
5059 | 6835 | 5.319043 | AGTGGTCAAAGGGAGAACATAAA | 57.681 | 39.130 | 0.00 | 0.00 | 34.81 | 1.40 |
5083 | 6859 | 5.373812 | AGCCTGCCACTTTAAGTACATAT | 57.626 | 39.130 | 0.00 | 0.00 | 0.00 | 1.78 |
5119 | 6895 | 1.135024 | CGGAAGGGGAAAATGTGCATG | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 4.06 |
5131 | 6907 | 0.680921 | ACAATGATGCACGGAAGGGG | 60.681 | 55.000 | 0.00 | 0.00 | 32.68 | 4.79 |
5293 | 7070 | 5.607477 | TGTATTACAGGCCTATAAGCACAC | 58.393 | 41.667 | 9.79 | 5.36 | 0.00 | 3.82 |
5295 | 7072 | 6.522054 | TCTTGTATTACAGGCCTATAAGCAC | 58.478 | 40.000 | 9.79 | 9.99 | 0.00 | 4.40 |
5296 | 7073 | 6.740944 | TCTTGTATTACAGGCCTATAAGCA | 57.259 | 37.500 | 9.79 | 8.04 | 0.00 | 3.91 |
5297 | 7074 | 6.092807 | GCATCTTGTATTACAGGCCTATAAGC | 59.907 | 42.308 | 9.79 | 5.52 | 0.00 | 3.09 |
5298 | 7075 | 7.390027 | AGCATCTTGTATTACAGGCCTATAAG | 58.610 | 38.462 | 9.79 | 6.16 | 0.00 | 1.73 |
5341 | 7118 | 5.707298 | AGTTATGTTCCACAAATCAGGACAG | 59.293 | 40.000 | 0.00 | 0.00 | 32.62 | 3.51 |
5603 | 7391 | 1.593006 | CCGCGTCATTATGAAGTCACC | 59.407 | 52.381 | 4.92 | 0.00 | 0.00 | 4.02 |
5713 | 7501 | 0.321996 | GTGGAACGGAAGAGCTCCTT | 59.678 | 55.000 | 10.93 | 4.00 | 42.85 | 3.36 |
5755 | 7543 | 2.825387 | TGAGCATCATGTGGCGGC | 60.825 | 61.111 | 0.00 | 0.00 | 42.56 | 6.53 |
5766 | 7554 | 0.104487 | CGAGGACTGAGCATGAGCAT | 59.896 | 55.000 | 0.00 | 0.00 | 45.49 | 3.79 |
5768 | 7556 | 0.741326 | TACGAGGACTGAGCATGAGC | 59.259 | 55.000 | 0.00 | 0.00 | 42.56 | 4.26 |
5836 | 7624 | 0.824759 | GTGAGTACGGAGGCCTTGAT | 59.175 | 55.000 | 6.77 | 0.00 | 0.00 | 2.57 |
5842 | 7630 | 1.961180 | ATGGCTGTGAGTACGGAGGC | 61.961 | 60.000 | 0.00 | 0.00 | 35.05 | 4.70 |
6041 | 7829 | 9.226606 | TCGTCTATAGGTCAAATTTGTCAAATT | 57.773 | 29.630 | 16.26 | 16.26 | 42.62 | 1.82 |
6042 | 7830 | 8.786826 | TCGTCTATAGGTCAAATTTGTCAAAT | 57.213 | 30.769 | 17.47 | 4.91 | 0.00 | 2.32 |
6043 | 7831 | 8.610248 | TTCGTCTATAGGTCAAATTTGTCAAA | 57.390 | 30.769 | 17.47 | 0.00 | 0.00 | 2.69 |
6044 | 7832 | 8.610248 | TTTCGTCTATAGGTCAAATTTGTCAA | 57.390 | 30.769 | 17.47 | 5.31 | 0.00 | 3.18 |
6045 | 7833 | 8.786826 | ATTTCGTCTATAGGTCAAATTTGTCA | 57.213 | 30.769 | 17.47 | 0.00 | 0.00 | 3.58 |
6046 | 7834 | 8.879759 | TGATTTCGTCTATAGGTCAAATTTGTC | 58.120 | 33.333 | 17.47 | 12.07 | 0.00 | 3.18 |
6047 | 7835 | 8.786826 | TGATTTCGTCTATAGGTCAAATTTGT | 57.213 | 30.769 | 17.47 | 1.67 | 0.00 | 2.83 |
6051 | 7839 | 9.613428 | TGATTTGATTTCGTCTATAGGTCAAAT | 57.387 | 29.630 | 17.06 | 17.06 | 43.48 | 2.32 |
6052 | 7840 | 8.879759 | GTGATTTGATTTCGTCTATAGGTCAAA | 58.120 | 33.333 | 0.00 | 7.93 | 38.14 | 2.69 |
6053 | 7841 | 8.038351 | TGTGATTTGATTTCGTCTATAGGTCAA | 58.962 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
6054 | 7842 | 7.552459 | TGTGATTTGATTTCGTCTATAGGTCA | 58.448 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
6055 | 7843 | 7.921214 | TCTGTGATTTGATTTCGTCTATAGGTC | 59.079 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
6056 | 7844 | 7.782049 | TCTGTGATTTGATTTCGTCTATAGGT | 58.218 | 34.615 | 0.00 | 0.00 | 0.00 | 3.08 |
6057 | 7845 | 8.648557 | TTCTGTGATTTGATTTCGTCTATAGG | 57.351 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
6059 | 7847 | 9.816354 | TCATTCTGTGATTTGATTTCGTCTATA | 57.184 | 29.630 | 0.00 | 0.00 | 0.00 | 1.31 |
6060 | 7848 | 8.722480 | TCATTCTGTGATTTGATTTCGTCTAT | 57.278 | 30.769 | 0.00 | 0.00 | 0.00 | 1.98 |
6061 | 7849 | 8.443160 | GTTCATTCTGTGATTTGATTTCGTCTA | 58.557 | 33.333 | 0.00 | 0.00 | 36.54 | 2.59 |
6062 | 7850 | 7.173907 | AGTTCATTCTGTGATTTGATTTCGTCT | 59.826 | 33.333 | 0.00 | 0.00 | 36.54 | 4.18 |
6063 | 7851 | 7.269937 | CAGTTCATTCTGTGATTTGATTTCGTC | 59.730 | 37.037 | 0.00 | 0.00 | 36.54 | 4.20 |
6064 | 7852 | 7.080099 | CAGTTCATTCTGTGATTTGATTTCGT | 58.920 | 34.615 | 0.00 | 0.00 | 36.54 | 3.85 |
6065 | 7853 | 7.080099 | ACAGTTCATTCTGTGATTTGATTTCG | 58.920 | 34.615 | 0.00 | 0.00 | 45.40 | 3.46 |
6066 | 7854 | 8.807667 | AACAGTTCATTCTGTGATTTGATTTC | 57.192 | 30.769 | 0.10 | 0.00 | 46.25 | 2.17 |
6067 | 7855 | 7.592533 | CGAACAGTTCATTCTGTGATTTGATTT | 59.407 | 33.333 | 13.82 | 0.00 | 46.25 | 2.17 |
6068 | 7856 | 7.080099 | CGAACAGTTCATTCTGTGATTTGATT | 58.920 | 34.615 | 13.82 | 0.00 | 46.25 | 2.57 |
6069 | 7857 | 6.205464 | ACGAACAGTTCATTCTGTGATTTGAT | 59.795 | 34.615 | 13.82 | 0.00 | 46.25 | 2.57 |
6070 | 7858 | 5.527214 | ACGAACAGTTCATTCTGTGATTTGA | 59.473 | 36.000 | 13.82 | 0.00 | 46.25 | 2.69 |
6071 | 7859 | 5.622448 | CACGAACAGTTCATTCTGTGATTTG | 59.378 | 40.000 | 13.82 | 0.00 | 46.25 | 2.32 |
6072 | 7860 | 5.527214 | TCACGAACAGTTCATTCTGTGATTT | 59.473 | 36.000 | 13.82 | 0.00 | 46.25 | 2.17 |
6073 | 7861 | 5.056480 | TCACGAACAGTTCATTCTGTGATT | 58.944 | 37.500 | 13.82 | 0.00 | 46.25 | 2.57 |
6074 | 7862 | 4.631131 | TCACGAACAGTTCATTCTGTGAT | 58.369 | 39.130 | 13.82 | 0.00 | 46.25 | 3.06 |
6075 | 7863 | 4.053469 | TCACGAACAGTTCATTCTGTGA | 57.947 | 40.909 | 13.82 | 13.82 | 46.25 | 3.58 |
6076 | 7864 | 4.794248 | TTCACGAACAGTTCATTCTGTG | 57.206 | 40.909 | 13.82 | 11.91 | 46.25 | 3.66 |
6078 | 7866 | 5.409643 | AGTTTCACGAACAGTTCATTCTG | 57.590 | 39.130 | 13.82 | 3.08 | 40.84 | 3.02 |
6079 | 7867 | 7.730364 | AATAGTTTCACGAACAGTTCATTCT | 57.270 | 32.000 | 13.82 | 5.24 | 40.84 | 2.40 |
6080 | 7868 | 8.067784 | TGAAATAGTTTCACGAACAGTTCATTC | 58.932 | 33.333 | 13.82 | 2.99 | 44.21 | 2.67 |
6081 | 7869 | 7.925993 | TGAAATAGTTTCACGAACAGTTCATT | 58.074 | 30.769 | 13.82 | 0.39 | 44.21 | 2.57 |
6082 | 7870 | 7.490962 | TGAAATAGTTTCACGAACAGTTCAT | 57.509 | 32.000 | 13.82 | 0.00 | 44.21 | 2.57 |
6083 | 7871 | 6.912203 | TGAAATAGTTTCACGAACAGTTCA | 57.088 | 33.333 | 13.82 | 0.00 | 44.21 | 3.18 |
6094 | 7882 | 1.463056 | CAGCCGCGTGAAATAGTTTCA | 59.537 | 47.619 | 4.92 | 1.24 | 46.68 | 2.69 |
6095 | 7883 | 1.730064 | TCAGCCGCGTGAAATAGTTTC | 59.270 | 47.619 | 4.92 | 0.00 | 40.08 | 2.78 |
6096 | 7884 | 1.463444 | GTCAGCCGCGTGAAATAGTTT | 59.537 | 47.619 | 4.92 | 0.00 | 0.00 | 2.66 |
6097 | 7885 | 1.076332 | GTCAGCCGCGTGAAATAGTT | 58.924 | 50.000 | 4.92 | 0.00 | 0.00 | 2.24 |
6098 | 7886 | 0.739813 | GGTCAGCCGCGTGAAATAGT | 60.740 | 55.000 | 4.92 | 0.00 | 0.00 | 2.12 |
6099 | 7887 | 1.429148 | GGGTCAGCCGCGTGAAATAG | 61.429 | 60.000 | 4.92 | 0.00 | 34.97 | 1.73 |
6100 | 7888 | 1.448893 | GGGTCAGCCGCGTGAAATA | 60.449 | 57.895 | 4.92 | 0.00 | 34.97 | 1.40 |
6101 | 7889 | 2.746277 | GGGTCAGCCGCGTGAAAT | 60.746 | 61.111 | 4.92 | 0.00 | 34.97 | 2.17 |
6112 | 7900 | 4.514577 | CTAGGCGCCACGGGTCAG | 62.515 | 72.222 | 31.54 | 9.46 | 0.00 | 3.51 |
6122 | 7910 | 4.577246 | CGTCTGGGAGCTAGGCGC | 62.577 | 72.222 | 0.00 | 0.00 | 36.41 | 6.53 |
6123 | 7911 | 4.577246 | GCGTCTGGGAGCTAGGCG | 62.577 | 72.222 | 4.62 | 4.62 | 45.39 | 5.52 |
6124 | 7912 | 3.151022 | AGCGTCTGGGAGCTAGGC | 61.151 | 66.667 | 0.00 | 0.00 | 42.60 | 3.93 |
6125 | 7913 | 2.811101 | CAGCGTCTGGGAGCTAGG | 59.189 | 66.667 | 0.00 | 0.00 | 42.52 | 3.02 |
6126 | 7914 | 2.105930 | GCAGCGTCTGGGAGCTAG | 59.894 | 66.667 | 8.57 | 0.00 | 42.52 | 3.42 |
6127 | 7915 | 2.679996 | TGCAGCGTCTGGGAGCTA | 60.680 | 61.111 | 8.57 | 0.00 | 42.52 | 3.32 |
6128 | 7916 | 4.385405 | GTGCAGCGTCTGGGAGCT | 62.385 | 66.667 | 8.57 | 0.00 | 45.74 | 4.09 |
6129 | 7917 | 2.897641 | CTAGTGCAGCGTCTGGGAGC | 62.898 | 65.000 | 8.57 | 0.00 | 31.21 | 4.70 |
6130 | 7918 | 1.140589 | CTAGTGCAGCGTCTGGGAG | 59.859 | 63.158 | 8.57 | 0.00 | 31.21 | 4.30 |
6131 | 7919 | 1.606601 | ACTAGTGCAGCGTCTGGGA | 60.607 | 57.895 | 0.00 | 0.00 | 31.21 | 4.37 |
6132 | 7920 | 1.446792 | CACTAGTGCAGCGTCTGGG | 60.447 | 63.158 | 10.54 | 0.00 | 31.21 | 4.45 |
6133 | 7921 | 4.175599 | CACTAGTGCAGCGTCTGG | 57.824 | 61.111 | 10.54 | 0.63 | 31.21 | 3.86 |
6143 | 7931 | 2.732597 | GCTCCTAGACGTTGCACTAGTG | 60.733 | 54.545 | 18.93 | 18.93 | 35.65 | 2.74 |
6144 | 7932 | 1.473278 | GCTCCTAGACGTTGCACTAGT | 59.527 | 52.381 | 7.95 | 0.00 | 35.65 | 2.57 |
6145 | 7933 | 1.746220 | AGCTCCTAGACGTTGCACTAG | 59.254 | 52.381 | 0.00 | 0.00 | 36.73 | 2.57 |
6146 | 7934 | 1.835494 | AGCTCCTAGACGTTGCACTA | 58.165 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
6147 | 7935 | 1.746220 | CTAGCTCCTAGACGTTGCACT | 59.254 | 52.381 | 0.00 | 0.00 | 36.26 | 4.40 |
6148 | 7936 | 1.202313 | CCTAGCTCCTAGACGTTGCAC | 60.202 | 57.143 | 0.00 | 0.00 | 36.26 | 4.57 |
6149 | 7937 | 1.103803 | CCTAGCTCCTAGACGTTGCA | 58.896 | 55.000 | 0.00 | 0.00 | 36.26 | 4.08 |
6150 | 7938 | 0.249114 | GCCTAGCTCCTAGACGTTGC | 60.249 | 60.000 | 0.00 | 0.00 | 36.26 | 4.17 |
6151 | 7939 | 0.029567 | CGCCTAGCTCCTAGACGTTG | 59.970 | 60.000 | 0.00 | 0.00 | 35.73 | 4.10 |
6152 | 7940 | 1.726533 | GCGCCTAGCTCCTAGACGTT | 61.727 | 60.000 | 0.00 | 0.00 | 40.91 | 3.99 |
6153 | 7941 | 2.188161 | GCGCCTAGCTCCTAGACGT | 61.188 | 63.158 | 0.00 | 0.00 | 40.91 | 4.34 |
6154 | 7942 | 2.640421 | GCGCCTAGCTCCTAGACG | 59.360 | 66.667 | 0.00 | 4.01 | 41.54 | 4.18 |
6164 | 7952 | 4.917998 | CACACTATACAATGTAGCGCCTAG | 59.082 | 45.833 | 2.29 | 0.00 | 0.00 | 3.02 |
6165 | 7953 | 4.261867 | CCACACTATACAATGTAGCGCCTA | 60.262 | 45.833 | 2.29 | 0.00 | 0.00 | 3.93 |
6166 | 7954 | 3.492656 | CCACACTATACAATGTAGCGCCT | 60.493 | 47.826 | 2.29 | 0.00 | 0.00 | 5.52 |
6167 | 7955 | 2.800544 | CCACACTATACAATGTAGCGCC | 59.199 | 50.000 | 2.29 | 0.00 | 0.00 | 6.53 |
6168 | 7956 | 2.221055 | GCCACACTATACAATGTAGCGC | 59.779 | 50.000 | 0.00 | 0.00 | 0.00 | 5.92 |
6170 | 7958 | 2.221055 | GCGCCACACTATACAATGTAGC | 59.779 | 50.000 | 0.00 | 0.00 | 31.15 | 3.58 |
6171 | 7959 | 2.800544 | GGCGCCACACTATACAATGTAG | 59.199 | 50.000 | 24.80 | 0.00 | 0.00 | 2.74 |
6172 | 7960 | 2.432874 | AGGCGCCACACTATACAATGTA | 59.567 | 45.455 | 31.54 | 0.00 | 0.00 | 2.29 |
6173 | 7961 | 1.209504 | AGGCGCCACACTATACAATGT | 59.790 | 47.619 | 31.54 | 0.00 | 0.00 | 2.71 |
6174 | 7962 | 1.953559 | AGGCGCCACACTATACAATG | 58.046 | 50.000 | 31.54 | 0.00 | 0.00 | 2.82 |
6175 | 7963 | 2.548067 | GCTAGGCGCCACACTATACAAT | 60.548 | 50.000 | 31.54 | 5.27 | 0.00 | 2.71 |
6176 | 7964 | 1.202486 | GCTAGGCGCCACACTATACAA | 60.202 | 52.381 | 31.54 | 0.00 | 0.00 | 2.41 |
6177 | 7965 | 0.387929 | GCTAGGCGCCACACTATACA | 59.612 | 55.000 | 31.54 | 0.33 | 0.00 | 2.29 |
6178 | 7966 | 0.674534 | AGCTAGGCGCCACACTATAC | 59.325 | 55.000 | 31.54 | 8.64 | 40.39 | 1.47 |
6179 | 7967 | 0.959553 | GAGCTAGGCGCCACACTATA | 59.040 | 55.000 | 31.54 | 10.17 | 40.39 | 1.31 |
6180 | 7968 | 0.757188 | AGAGCTAGGCGCCACACTAT | 60.757 | 55.000 | 31.54 | 16.52 | 40.39 | 2.12 |
6181 | 7969 | 1.379977 | AGAGCTAGGCGCCACACTA | 60.380 | 57.895 | 31.54 | 11.42 | 40.39 | 2.74 |
6182 | 7970 | 2.681778 | AGAGCTAGGCGCCACACT | 60.682 | 61.111 | 31.54 | 21.99 | 40.39 | 3.55 |
6183 | 7971 | 2.202810 | GAGAGCTAGGCGCCACAC | 60.203 | 66.667 | 31.54 | 17.11 | 40.39 | 3.82 |
6184 | 7972 | 2.679996 | TGAGAGCTAGGCGCCACA | 60.680 | 61.111 | 31.54 | 15.42 | 40.39 | 4.17 |
6185 | 7973 | 2.105930 | CTGAGAGCTAGGCGCCAC | 59.894 | 66.667 | 31.54 | 17.93 | 40.39 | 5.01 |
6186 | 7974 | 3.150335 | CCTGAGAGCTAGGCGCCA | 61.150 | 66.667 | 31.54 | 14.00 | 40.39 | 5.69 |
6196 | 7984 | 3.117171 | GTGTGCAGCGCCTGAGAG | 61.117 | 66.667 | 2.29 | 0.00 | 32.44 | 3.20 |
6197 | 7985 | 3.619767 | AGTGTGCAGCGCCTGAGA | 61.620 | 61.111 | 2.29 | 0.00 | 32.44 | 3.27 |
6198 | 7986 | 3.420606 | CAGTGTGCAGCGCCTGAG | 61.421 | 66.667 | 15.59 | 0.00 | 32.44 | 3.35 |
6199 | 7987 | 3.927548 | TCAGTGTGCAGCGCCTGA | 61.928 | 61.111 | 18.04 | 18.04 | 32.44 | 3.86 |
6200 | 7988 | 3.720193 | GTCAGTGTGCAGCGCCTG | 61.720 | 66.667 | 2.29 | 14.85 | 34.12 | 4.85 |
6201 | 7989 | 2.099652 | TAAGTCAGTGTGCAGCGCCT | 62.100 | 55.000 | 2.29 | 0.00 | 0.00 | 5.52 |
6202 | 7990 | 1.630244 | CTAAGTCAGTGTGCAGCGCC | 61.630 | 60.000 | 2.29 | 0.00 | 0.00 | 6.53 |
6203 | 7991 | 0.946221 | ACTAAGTCAGTGTGCAGCGC | 60.946 | 55.000 | 0.00 | 0.00 | 35.62 | 5.92 |
6204 | 7992 | 2.347697 | TACTAAGTCAGTGTGCAGCG | 57.652 | 50.000 | 0.00 | 0.00 | 38.24 | 5.18 |
6205 | 7993 | 5.613358 | AAATTACTAAGTCAGTGTGCAGC | 57.387 | 39.130 | 0.00 | 0.00 | 38.24 | 5.25 |
6206 | 7994 | 7.171508 | TCAGAAAATTACTAAGTCAGTGTGCAG | 59.828 | 37.037 | 0.00 | 0.00 | 38.24 | 4.41 |
6207 | 7995 | 6.989759 | TCAGAAAATTACTAAGTCAGTGTGCA | 59.010 | 34.615 | 0.00 | 0.00 | 38.24 | 4.57 |
6208 | 7996 | 7.421530 | TCAGAAAATTACTAAGTCAGTGTGC | 57.578 | 36.000 | 0.00 | 0.00 | 38.24 | 4.57 |
6209 | 7997 | 9.208022 | TGATCAGAAAATTACTAAGTCAGTGTG | 57.792 | 33.333 | 0.00 | 0.00 | 38.24 | 3.82 |
6210 | 7998 | 9.209175 | GTGATCAGAAAATTACTAAGTCAGTGT | 57.791 | 33.333 | 0.00 | 0.00 | 38.24 | 3.55 |
6211 | 7999 | 9.208022 | TGTGATCAGAAAATTACTAAGTCAGTG | 57.792 | 33.333 | 0.00 | 0.00 | 38.24 | 3.66 |
6212 | 8000 | 9.209175 | GTGTGATCAGAAAATTACTAAGTCAGT | 57.791 | 33.333 | 0.00 | 0.00 | 41.62 | 3.41 |
6213 | 8001 | 8.376203 | CGTGTGATCAGAAAATTACTAAGTCAG | 58.624 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
6214 | 8002 | 7.330946 | CCGTGTGATCAGAAAATTACTAAGTCA | 59.669 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
6215 | 8003 | 7.201530 | CCCGTGTGATCAGAAAATTACTAAGTC | 60.202 | 40.741 | 0.00 | 0.00 | 0.00 | 3.01 |
6216 | 8004 | 6.594159 | CCCGTGTGATCAGAAAATTACTAAGT | 59.406 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
6217 | 8005 | 6.594159 | ACCCGTGTGATCAGAAAATTACTAAG | 59.406 | 38.462 | 0.00 | 0.00 | 0.00 | 2.18 |
6218 | 8006 | 6.370442 | CACCCGTGTGATCAGAAAATTACTAA | 59.630 | 38.462 | 0.00 | 0.00 | 45.76 | 2.24 |
6219 | 8007 | 5.872617 | CACCCGTGTGATCAGAAAATTACTA | 59.127 | 40.000 | 0.00 | 0.00 | 45.76 | 1.82 |
6220 | 8008 | 4.695455 | CACCCGTGTGATCAGAAAATTACT | 59.305 | 41.667 | 0.00 | 0.00 | 45.76 | 2.24 |
6221 | 8009 | 4.671766 | GCACCCGTGTGATCAGAAAATTAC | 60.672 | 45.833 | 0.90 | 0.00 | 45.76 | 1.89 |
6222 | 8010 | 3.438781 | GCACCCGTGTGATCAGAAAATTA | 59.561 | 43.478 | 0.90 | 0.00 | 45.76 | 1.40 |
6223 | 8011 | 2.228822 | GCACCCGTGTGATCAGAAAATT | 59.771 | 45.455 | 0.90 | 0.00 | 45.76 | 1.82 |
6224 | 8012 | 1.812571 | GCACCCGTGTGATCAGAAAAT | 59.187 | 47.619 | 0.90 | 0.00 | 45.76 | 1.82 |
6225 | 8013 | 1.234821 | GCACCCGTGTGATCAGAAAA | 58.765 | 50.000 | 0.90 | 0.00 | 45.76 | 2.29 |
6226 | 8014 | 0.948623 | CGCACCCGTGTGATCAGAAA | 60.949 | 55.000 | 0.90 | 0.00 | 45.76 | 2.52 |
6227 | 8015 | 1.374125 | CGCACCCGTGTGATCAGAA | 60.374 | 57.895 | 0.90 | 0.00 | 45.76 | 3.02 |
6228 | 8016 | 2.261361 | CGCACCCGTGTGATCAGA | 59.739 | 61.111 | 0.90 | 0.00 | 45.76 | 3.27 |
6229 | 8017 | 2.261361 | TCGCACCCGTGTGATCAG | 59.739 | 61.111 | 0.90 | 0.00 | 45.76 | 2.90 |
6242 | 8030 | 3.932580 | CTACAAGGCCAGCGTCGCA | 62.933 | 63.158 | 21.09 | 0.00 | 0.00 | 5.10 |
6243 | 8031 | 3.188786 | CTACAAGGCCAGCGTCGC | 61.189 | 66.667 | 9.80 | 9.80 | 0.00 | 5.19 |
6244 | 8032 | 3.188786 | GCTACAAGGCCAGCGTCG | 61.189 | 66.667 | 5.01 | 0.00 | 0.00 | 5.12 |
6252 | 8040 | 0.105039 | ACAGATAGGCGCTACAAGGC | 59.895 | 55.000 | 7.64 | 0.00 | 0.00 | 4.35 |
6253 | 8041 | 1.409064 | TCACAGATAGGCGCTACAAGG | 59.591 | 52.381 | 7.64 | 0.00 | 0.00 | 3.61 |
6254 | 8042 | 2.544694 | CCTCACAGATAGGCGCTACAAG | 60.545 | 54.545 | 7.64 | 0.00 | 0.00 | 3.16 |
6255 | 8043 | 1.409064 | CCTCACAGATAGGCGCTACAA | 59.591 | 52.381 | 7.64 | 0.00 | 0.00 | 2.41 |
6256 | 8044 | 1.032794 | CCTCACAGATAGGCGCTACA | 58.967 | 55.000 | 7.64 | 0.00 | 0.00 | 2.74 |
6257 | 8045 | 3.875838 | CCTCACAGATAGGCGCTAC | 57.124 | 57.895 | 7.64 | 0.00 | 0.00 | 3.58 |
6263 | 8051 | 0.108186 | TGCAACGCCTCACAGATAGG | 60.108 | 55.000 | 0.00 | 0.00 | 37.17 | 2.57 |
6264 | 8052 | 1.002366 | GTGCAACGCCTCACAGATAG | 58.998 | 55.000 | 0.00 | 0.00 | 33.63 | 2.08 |
6265 | 8053 | 0.320050 | TGTGCAACGCCTCACAGATA | 59.680 | 50.000 | 0.00 | 0.00 | 42.39 | 1.98 |
6266 | 8054 | 1.071299 | TGTGCAACGCCTCACAGAT | 59.929 | 52.632 | 0.00 | 0.00 | 42.39 | 2.90 |
6267 | 8055 | 2.503546 | TGTGCAACGCCTCACAGA | 59.496 | 55.556 | 0.00 | 0.00 | 42.39 | 3.41 |
6269 | 8057 | 2.179547 | CACTGTGCAACGCCTCACA | 61.180 | 57.895 | 0.00 | 4.54 | 42.39 | 3.58 |
6270 | 8058 | 0.878523 | TACACTGTGCAACGCCTCAC | 60.879 | 55.000 | 7.90 | 0.00 | 42.39 | 3.51 |
6271 | 8059 | 0.599991 | CTACACTGTGCAACGCCTCA | 60.600 | 55.000 | 7.90 | 0.00 | 42.39 | 3.86 |
6272 | 8060 | 0.600255 | ACTACACTGTGCAACGCCTC | 60.600 | 55.000 | 7.90 | 0.00 | 42.39 | 4.70 |
6273 | 8061 | 0.880278 | CACTACACTGTGCAACGCCT | 60.880 | 55.000 | 7.90 | 0.00 | 42.39 | 5.52 |
6274 | 8062 | 1.157870 | ACACTACACTGTGCAACGCC | 61.158 | 55.000 | 7.90 | 0.00 | 42.39 | 5.68 |
6275 | 8063 | 0.042188 | CACACTACACTGTGCAACGC | 60.042 | 55.000 | 7.90 | 0.00 | 42.39 | 4.84 |
6276 | 8064 | 0.581529 | CCACACTACACTGTGCAACG | 59.418 | 55.000 | 7.90 | 0.00 | 42.39 | 4.10 |
6277 | 8065 | 0.307760 | GCCACACTACACTGTGCAAC | 59.692 | 55.000 | 7.90 | 0.00 | 40.33 | 4.17 |
6278 | 8066 | 1.157257 | CGCCACACTACACTGTGCAA | 61.157 | 55.000 | 7.90 | 0.00 | 40.33 | 4.08 |
6279 | 8067 | 1.594021 | CGCCACACTACACTGTGCA | 60.594 | 57.895 | 7.90 | 0.00 | 40.33 | 4.57 |
6280 | 8068 | 2.954753 | GCGCCACACTACACTGTGC | 61.955 | 63.158 | 7.90 | 0.00 | 40.33 | 4.57 |
6281 | 8069 | 2.317609 | GGCGCCACACTACACTGTG | 61.318 | 63.158 | 24.80 | 6.19 | 41.19 | 3.66 |
6282 | 8070 | 2.030562 | GGCGCCACACTACACTGT | 59.969 | 61.111 | 24.80 | 0.00 | 0.00 | 3.55 |
6283 | 8071 | 1.291877 | GAAGGCGCCACACTACACTG | 61.292 | 60.000 | 31.54 | 0.00 | 0.00 | 3.66 |
6284 | 8072 | 1.004918 | GAAGGCGCCACACTACACT | 60.005 | 57.895 | 31.54 | 0.00 | 0.00 | 3.55 |
6285 | 8073 | 2.380410 | CGAAGGCGCCACACTACAC | 61.380 | 63.158 | 31.54 | 8.98 | 0.00 | 2.90 |
6286 | 8074 | 2.048597 | CGAAGGCGCCACACTACA | 60.049 | 61.111 | 31.54 | 0.00 | 0.00 | 2.74 |
6287 | 8075 | 2.048503 | ACGAAGGCGCCACACTAC | 60.049 | 61.111 | 31.54 | 11.50 | 42.48 | 2.73 |
6288 | 8076 | 2.048597 | CACGAAGGCGCCACACTA | 60.049 | 61.111 | 31.54 | 0.00 | 42.48 | 2.74 |
6289 | 8077 | 4.235762 | ACACGAAGGCGCCACACT | 62.236 | 61.111 | 31.54 | 9.96 | 42.48 | 3.55 |
6290 | 8078 | 3.712881 | GACACGAAGGCGCCACAC | 61.713 | 66.667 | 31.54 | 17.81 | 42.48 | 3.82 |
6298 | 8086 | 4.351938 | TGACGCCCGACACGAAGG | 62.352 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
6299 | 8087 | 3.103911 | GTGACGCCCGACACGAAG | 61.104 | 66.667 | 7.43 | 0.00 | 32.16 | 3.79 |
6300 | 8088 | 3.902086 | TGTGACGCCCGACACGAA | 61.902 | 61.111 | 15.80 | 0.31 | 42.06 | 3.85 |
6301 | 8089 | 4.634133 | GTGTGACGCCCGACACGA | 62.634 | 66.667 | 15.80 | 5.46 | 42.06 | 4.35 |
6302 | 8090 | 4.934942 | TGTGTGACGCCCGACACG | 62.935 | 66.667 | 15.80 | 0.00 | 44.55 | 4.49 |
6303 | 8091 | 1.707239 | TTTTGTGTGACGCCCGACAC | 61.707 | 55.000 | 14.47 | 14.47 | 42.40 | 3.67 |
6304 | 8092 | 1.025113 | TTTTTGTGTGACGCCCGACA | 61.025 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
6305 | 8093 | 0.316689 | CTTTTTGTGTGACGCCCGAC | 60.317 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
6306 | 8094 | 1.440938 | CCTTTTTGTGTGACGCCCGA | 61.441 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
6307 | 8095 | 1.008995 | CCTTTTTGTGTGACGCCCG | 60.009 | 57.895 | 0.00 | 0.00 | 0.00 | 6.13 |
6308 | 8096 | 0.030235 | GACCTTTTTGTGTGACGCCC | 59.970 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
6309 | 8097 | 0.736053 | TGACCTTTTTGTGTGACGCC | 59.264 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
6310 | 8098 | 1.859998 | GCTGACCTTTTTGTGTGACGC | 60.860 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
6311 | 8099 | 1.268539 | GGCTGACCTTTTTGTGTGACG | 60.269 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
6312 | 8100 | 1.268539 | CGGCTGACCTTTTTGTGTGAC | 60.269 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
6313 | 8101 | 1.021202 | CGGCTGACCTTTTTGTGTGA | 58.979 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
6314 | 8102 | 0.594796 | GCGGCTGACCTTTTTGTGTG | 60.595 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
6315 | 8103 | 1.733526 | GCGGCTGACCTTTTTGTGT | 59.266 | 52.632 | 0.00 | 0.00 | 0.00 | 3.72 |
6316 | 8104 | 1.370414 | CGCGGCTGACCTTTTTGTG | 60.370 | 57.895 | 0.00 | 0.00 | 0.00 | 3.33 |
6317 | 8105 | 1.822186 | ACGCGGCTGACCTTTTTGT | 60.822 | 52.632 | 12.47 | 0.00 | 0.00 | 2.83 |
6318 | 8106 | 1.370414 | CACGCGGCTGACCTTTTTG | 60.370 | 57.895 | 12.47 | 0.00 | 0.00 | 2.44 |
6319 | 8107 | 1.098712 | TTCACGCGGCTGACCTTTTT | 61.099 | 50.000 | 12.47 | 0.00 | 0.00 | 1.94 |
6320 | 8108 | 1.098712 | TTTCACGCGGCTGACCTTTT | 61.099 | 50.000 | 12.47 | 0.00 | 0.00 | 2.27 |
6321 | 8109 | 0.889186 | ATTTCACGCGGCTGACCTTT | 60.889 | 50.000 | 12.47 | 0.00 | 0.00 | 3.11 |
6322 | 8110 | 0.036765 | TATTTCACGCGGCTGACCTT | 60.037 | 50.000 | 12.47 | 0.00 | 0.00 | 3.50 |
6323 | 8111 | 0.460284 | CTATTTCACGCGGCTGACCT | 60.460 | 55.000 | 12.47 | 0.00 | 0.00 | 3.85 |
6324 | 8112 | 0.739813 | ACTATTTCACGCGGCTGACC | 60.740 | 55.000 | 12.47 | 0.00 | 0.00 | 4.02 |
6325 | 8113 | 1.076332 | AACTATTTCACGCGGCTGAC | 58.924 | 50.000 | 12.47 | 0.00 | 0.00 | 3.51 |
6326 | 8114 | 1.730064 | GAAACTATTTCACGCGGCTGA | 59.270 | 47.619 | 12.47 | 2.44 | 39.45 | 4.26 |
6327 | 8115 | 1.463056 | TGAAACTATTTCACGCGGCTG | 59.537 | 47.619 | 12.47 | 0.00 | 44.21 | 4.85 |
6328 | 8116 | 1.803334 | TGAAACTATTTCACGCGGCT | 58.197 | 45.000 | 12.47 | 0.00 | 44.21 | 5.52 |
6335 | 8123 | 8.786826 | AATGAACTATCCGTGAAACTATTTCA | 57.213 | 30.769 | 0.00 | 0.00 | 46.68 | 2.69 |
6336 | 8124 | 9.099454 | AGAATGAACTATCCGTGAAACTATTTC | 57.901 | 33.333 | 0.00 | 0.00 | 40.08 | 2.17 |
6337 | 8125 | 8.883731 | CAGAATGAACTATCCGTGAAACTATTT | 58.116 | 33.333 | 0.00 | 0.00 | 39.69 | 1.40 |
6338 | 8126 | 8.041323 | ACAGAATGAACTATCCGTGAAACTATT | 58.959 | 33.333 | 0.00 | 0.00 | 39.69 | 1.73 |
6339 | 8127 | 7.492669 | CACAGAATGAACTATCCGTGAAACTAT | 59.507 | 37.037 | 0.00 | 0.00 | 39.69 | 2.12 |
6340 | 8128 | 6.811665 | CACAGAATGAACTATCCGTGAAACTA | 59.188 | 38.462 | 0.00 | 0.00 | 39.69 | 2.24 |
6341 | 8129 | 5.639506 | CACAGAATGAACTATCCGTGAAACT | 59.360 | 40.000 | 0.00 | 0.00 | 39.69 | 2.66 |
6342 | 8130 | 5.637810 | TCACAGAATGAACTATCCGTGAAAC | 59.362 | 40.000 | 0.00 | 0.00 | 39.69 | 2.78 |
6343 | 8131 | 5.789521 | TCACAGAATGAACTATCCGTGAAA | 58.210 | 37.500 | 0.00 | 0.00 | 39.69 | 2.69 |
6344 | 8132 | 5.400066 | TCACAGAATGAACTATCCGTGAA | 57.600 | 39.130 | 0.00 | 0.00 | 39.69 | 3.18 |
6345 | 8133 | 5.598416 | ATCACAGAATGAACTATCCGTGA | 57.402 | 39.130 | 0.00 | 0.00 | 41.93 | 4.35 |
6346 | 8134 | 6.313658 | TCAAATCACAGAATGAACTATCCGTG | 59.686 | 38.462 | 0.00 | 0.00 | 41.93 | 4.94 |
6347 | 8135 | 6.406370 | TCAAATCACAGAATGAACTATCCGT | 58.594 | 36.000 | 0.00 | 0.00 | 41.93 | 4.69 |
6348 | 8136 | 6.908870 | TCAAATCACAGAATGAACTATCCG | 57.091 | 37.500 | 0.00 | 0.00 | 41.93 | 4.18 |
6352 | 8140 | 9.897744 | GACAAAATCAAATCACAGAATGAACTA | 57.102 | 29.630 | 0.00 | 0.00 | 41.93 | 2.24 |
6353 | 8141 | 8.636213 | AGACAAAATCAAATCACAGAATGAACT | 58.364 | 29.630 | 0.00 | 0.00 | 41.93 | 3.01 |
6354 | 8142 | 8.807667 | AGACAAAATCAAATCACAGAATGAAC | 57.192 | 30.769 | 0.00 | 0.00 | 41.93 | 3.18 |
6359 | 8147 | 9.739276 | ACCTATAGACAAAATCAAATCACAGAA | 57.261 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
6360 | 8148 | 9.383519 | GACCTATAGACAAAATCAAATCACAGA | 57.616 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
6361 | 8149 | 9.166173 | TGACCTATAGACAAAATCAAATCACAG | 57.834 | 33.333 | 0.00 | 0.00 | 0.00 | 3.66 |
6362 | 8150 | 9.513906 | TTGACCTATAGACAAAATCAAATCACA | 57.486 | 29.630 | 0.00 | 0.00 | 0.00 | 3.58 |
6388 | 8176 | 7.335422 | TGGTTATTGCGGCAAATTTGATAAATT | 59.665 | 29.630 | 22.31 | 0.78 | 42.62 | 1.82 |
6389 | 8177 | 6.820656 | TGGTTATTGCGGCAAATTTGATAAAT | 59.179 | 30.769 | 22.31 | 15.46 | 0.00 | 1.40 |
6390 | 8178 | 6.166279 | TGGTTATTGCGGCAAATTTGATAAA | 58.834 | 32.000 | 22.31 | 9.87 | 0.00 | 1.40 |
6391 | 8179 | 5.724328 | TGGTTATTGCGGCAAATTTGATAA | 58.276 | 33.333 | 22.31 | 12.59 | 0.00 | 1.75 |
6392 | 8180 | 5.330455 | TGGTTATTGCGGCAAATTTGATA | 57.670 | 34.783 | 22.31 | 7.33 | 0.00 | 2.15 |
6393 | 8181 | 4.183101 | CTGGTTATTGCGGCAAATTTGAT | 58.817 | 39.130 | 22.31 | 8.30 | 0.00 | 2.57 |
6394 | 8182 | 3.583806 | CTGGTTATTGCGGCAAATTTGA | 58.416 | 40.909 | 22.31 | 0.36 | 0.00 | 2.69 |
6395 | 8183 | 2.672381 | CCTGGTTATTGCGGCAAATTTG | 59.328 | 45.455 | 20.48 | 14.03 | 0.00 | 2.32 |
6396 | 8184 | 2.354604 | CCCTGGTTATTGCGGCAAATTT | 60.355 | 45.455 | 20.48 | 6.00 | 0.00 | 1.82 |
6397 | 8185 | 1.206849 | CCCTGGTTATTGCGGCAAATT | 59.793 | 47.619 | 20.48 | 6.79 | 0.00 | 1.82 |
6398 | 8186 | 0.823460 | CCCTGGTTATTGCGGCAAAT | 59.177 | 50.000 | 20.48 | 10.70 | 0.00 | 2.32 |
6399 | 8187 | 1.882989 | GCCCTGGTTATTGCGGCAAA | 61.883 | 55.000 | 20.48 | 6.50 | 39.50 | 3.68 |
6400 | 8188 | 2.347322 | GCCCTGGTTATTGCGGCAA | 61.347 | 57.895 | 18.85 | 18.85 | 39.50 | 4.52 |
6401 | 8189 | 2.753849 | GCCCTGGTTATTGCGGCA | 60.754 | 61.111 | 0.00 | 0.00 | 39.50 | 5.69 |
6402 | 8190 | 3.527427 | GGCCCTGGTTATTGCGGC | 61.527 | 66.667 | 0.00 | 0.00 | 38.96 | 6.53 |
6403 | 8191 | 2.596553 | TACGGCCCTGGTTATTGCGG | 62.597 | 60.000 | 0.00 | 0.00 | 0.00 | 5.69 |
6404 | 8192 | 0.534203 | ATACGGCCCTGGTTATTGCG | 60.534 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6405 | 8193 | 1.235724 | GATACGGCCCTGGTTATTGC | 58.764 | 55.000 | 0.00 | 0.00 | 0.00 | 3.56 |
6406 | 8194 | 1.142060 | TGGATACGGCCCTGGTTATTG | 59.858 | 52.381 | 0.00 | 0.00 | 42.51 | 1.90 |
6407 | 8195 | 1.142262 | GTGGATACGGCCCTGGTTATT | 59.858 | 52.381 | 0.00 | 0.00 | 42.51 | 1.40 |
6408 | 8196 | 0.763035 | GTGGATACGGCCCTGGTTAT | 59.237 | 55.000 | 0.00 | 0.00 | 42.51 | 1.89 |
6409 | 8197 | 0.618107 | TGTGGATACGGCCCTGGTTA | 60.618 | 55.000 | 0.00 | 0.00 | 42.51 | 2.85 |
6410 | 8198 | 1.493854 | TTGTGGATACGGCCCTGGTT | 61.494 | 55.000 | 0.00 | 0.00 | 42.51 | 3.67 |
6411 | 8199 | 1.910580 | CTTGTGGATACGGCCCTGGT | 61.911 | 60.000 | 0.00 | 0.00 | 42.51 | 4.00 |
6412 | 8200 | 1.153168 | CTTGTGGATACGGCCCTGG | 60.153 | 63.158 | 0.00 | 0.00 | 42.51 | 4.45 |
6413 | 8201 | 1.819632 | GCTTGTGGATACGGCCCTG | 60.820 | 63.158 | 0.00 | 0.00 | 42.51 | 4.45 |
6503 | 8291 | 1.645710 | ATCGTTCCTCCAGACCAAGT | 58.354 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
6589 | 8377 | 0.668401 | CCACCGGAACTCGTAACCAC | 60.668 | 60.000 | 9.46 | 0.00 | 37.11 | 4.16 |
6622 | 8410 | 1.077716 | GCCTAACCAACCCGAGCAT | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 3.79 |
6876 | 8672 | 3.447950 | AGGGGTTGTACCTAACGAGAAT | 58.552 | 45.455 | 0.00 | 0.00 | 38.64 | 2.40 |
6877 | 8673 | 2.827921 | GAGGGGTTGTACCTAACGAGAA | 59.172 | 50.000 | 0.00 | 0.00 | 38.79 | 2.87 |
6881 | 8677 | 0.890683 | ACGAGGGGTTGTACCTAACG | 59.109 | 55.000 | 0.00 | 0.00 | 38.79 | 3.18 |
6884 | 8680 | 3.356290 | GAAGTACGAGGGGTTGTACCTA | 58.644 | 50.000 | 0.00 | 0.00 | 41.42 | 3.08 |
6896 | 8692 | 6.846325 | AAAAAGAAACAGAGGAAGTACGAG | 57.154 | 37.500 | 0.00 | 0.00 | 0.00 | 4.18 |
6904 | 8700 | 5.286267 | ACGGAGTAAAAAGAAACAGAGGA | 57.714 | 39.130 | 0.00 | 0.00 | 41.94 | 3.71 |
6930 | 8730 | 7.704472 | TCAAATTTTGCGTAGTTTGACTTTGAT | 59.296 | 29.630 | 4.19 | 0.00 | 36.11 | 2.57 |
6938 | 8738 | 5.957910 | TTGGTCAAATTTTGCGTAGTTTG | 57.042 | 34.783 | 4.19 | 0.00 | 33.91 | 2.93 |
7079 | 8879 | 7.716768 | AGCTTTGTAGAGTTTGACTAACTTC | 57.283 | 36.000 | 3.78 | 0.00 | 47.00 | 3.01 |
7211 | 9245 | 6.063496 | AGGGAGGGAGTACATTAAAACTTC | 57.937 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
7219 | 9253 | 0.338814 | ACGGAGGGAGGGAGTACATT | 59.661 | 55.000 | 0.00 | 0.00 | 0.00 | 2.71 |
7246 | 9928 | 8.868744 | TCAAAAATTCTATACGCAAAACTACG | 57.131 | 30.769 | 0.00 | 0.00 | 0.00 | 3.51 |
7252 | 9934 | 8.897809 | CGACTTTTCAAAAATTCTATACGCAAA | 58.102 | 29.630 | 4.68 | 0.00 | 0.00 | 3.68 |
7253 | 9935 | 8.071368 | ACGACTTTTCAAAAATTCTATACGCAA | 58.929 | 29.630 | 0.00 | 0.00 | 0.00 | 4.85 |
7278 | 9960 | 2.615869 | TGGTCAAAGTTTGCAAAGCAC | 58.384 | 42.857 | 13.26 | 1.23 | 38.71 | 4.40 |
7451 | 11354 | 7.567635 | CATTGGAGTTGCTCTAATGTAGTGCA | 61.568 | 42.308 | 20.04 | 7.70 | 46.83 | 4.57 |
7465 | 11368 | 1.648467 | GGTCGCCTCATTGGAGTTGC | 61.648 | 60.000 | 0.00 | 0.00 | 39.64 | 4.17 |
7466 | 11369 | 1.026718 | GGGTCGCCTCATTGGAGTTG | 61.027 | 60.000 | 0.00 | 0.00 | 39.64 | 3.16 |
7467 | 11370 | 1.299976 | GGGTCGCCTCATTGGAGTT | 59.700 | 57.895 | 0.00 | 0.00 | 39.64 | 3.01 |
7468 | 11371 | 1.488705 | TTGGGTCGCCTCATTGGAGT | 61.489 | 55.000 | 0.00 | 0.00 | 39.64 | 3.85 |
7469 | 11372 | 0.322456 | TTTGGGTCGCCTCATTGGAG | 60.322 | 55.000 | 0.00 | 0.00 | 41.02 | 3.86 |
7470 | 11373 | 0.608035 | GTTTGGGTCGCCTCATTGGA | 60.608 | 55.000 | 0.00 | 0.00 | 38.35 | 3.53 |
7471 | 11374 | 1.883021 | GTTTGGGTCGCCTCATTGG | 59.117 | 57.895 | 0.00 | 0.00 | 39.35 | 3.16 |
7472 | 11375 | 0.953471 | TCGTTTGGGTCGCCTCATTG | 60.953 | 55.000 | 0.00 | 0.00 | 0.00 | 2.82 |
7473 | 11376 | 0.250553 | TTCGTTTGGGTCGCCTCATT | 60.251 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
7475 | 11378 | 1.595929 | GTTCGTTTGGGTCGCCTCA | 60.596 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
7476 | 11379 | 2.664436 | CGTTCGTTTGGGTCGCCTC | 61.664 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
7478 | 11381 | 4.379143 | GCGTTCGTTTGGGTCGCC | 62.379 | 66.667 | 0.00 | 0.00 | 40.83 | 5.54 |
7479 | 11382 | 3.343421 | AGCGTTCGTTTGGGTCGC | 61.343 | 61.111 | 0.00 | 0.00 | 45.82 | 5.19 |
7480 | 11383 | 1.768112 | AACAGCGTTCGTTTGGGTCG | 61.768 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
7481 | 11384 | 0.379316 | AAACAGCGTTCGTTTGGGTC | 59.621 | 50.000 | 0.00 | 0.00 | 35.31 | 4.46 |
7482 | 11385 | 0.812549 | AAAACAGCGTTCGTTTGGGT | 59.187 | 45.000 | 0.00 | 0.00 | 36.71 | 4.51 |
7483 | 11386 | 1.586123 | CAAAAACAGCGTTCGTTTGGG | 59.414 | 47.619 | 9.06 | 0.00 | 36.71 | 4.12 |
7484 | 11387 | 2.255316 | ACAAAAACAGCGTTCGTTTGG | 58.745 | 42.857 | 15.95 | 8.03 | 36.71 | 3.28 |
7485 | 11388 | 2.277834 | GGACAAAAACAGCGTTCGTTTG | 59.722 | 45.455 | 12.69 | 12.69 | 36.71 | 2.93 |
7486 | 11389 | 2.162809 | AGGACAAAAACAGCGTTCGTTT | 59.837 | 40.909 | 0.00 | 0.00 | 38.19 | 3.60 |
7487 | 11390 | 1.741145 | AGGACAAAAACAGCGTTCGTT | 59.259 | 42.857 | 0.00 | 0.00 | 0.00 | 3.85 |
7488 | 11391 | 1.375551 | AGGACAAAAACAGCGTTCGT | 58.624 | 45.000 | 0.00 | 0.00 | 0.00 | 3.85 |
7489 | 11392 | 2.468532 | AAGGACAAAAACAGCGTTCG | 57.531 | 45.000 | 0.00 | 0.00 | 0.00 | 3.95 |
7490 | 11393 | 6.074516 | GGATAAAAAGGACAAAAACAGCGTTC | 60.075 | 38.462 | 0.00 | 0.00 | 0.00 | 3.95 |
7491 | 11394 | 5.751509 | GGATAAAAAGGACAAAAACAGCGTT | 59.248 | 36.000 | 0.00 | 0.00 | 0.00 | 4.84 |
7492 | 11395 | 5.286438 | GGATAAAAAGGACAAAAACAGCGT | 58.714 | 37.500 | 0.00 | 0.00 | 0.00 | 5.07 |
7493 | 11396 | 4.381566 | CGGATAAAAAGGACAAAAACAGCG | 59.618 | 41.667 | 0.00 | 0.00 | 0.00 | 5.18 |
7494 | 11397 | 5.286438 | ACGGATAAAAAGGACAAAAACAGC | 58.714 | 37.500 | 0.00 | 0.00 | 0.00 | 4.40 |
7495 | 11398 | 6.141685 | CGAACGGATAAAAAGGACAAAAACAG | 59.858 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
7496 | 11399 | 5.972382 | CGAACGGATAAAAAGGACAAAAACA | 59.028 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
7497 | 11400 | 5.400188 | CCGAACGGATAAAAAGGACAAAAAC | 59.600 | 40.000 | 7.53 | 0.00 | 37.50 | 2.43 |
7498 | 11401 | 5.507650 | CCCGAACGGATAAAAAGGACAAAAA | 60.508 | 40.000 | 15.07 | 0.00 | 37.50 | 1.94 |
7499 | 11402 | 4.023021 | CCCGAACGGATAAAAAGGACAAAA | 60.023 | 41.667 | 15.07 | 0.00 | 37.50 | 2.44 |
7500 | 11403 | 3.502979 | CCCGAACGGATAAAAAGGACAAA | 59.497 | 43.478 | 15.07 | 0.00 | 37.50 | 2.83 |
7501 | 11404 | 3.075884 | CCCGAACGGATAAAAAGGACAA | 58.924 | 45.455 | 15.07 | 0.00 | 37.50 | 3.18 |
7502 | 11405 | 2.038820 | ACCCGAACGGATAAAAAGGACA | 59.961 | 45.455 | 15.07 | 0.00 | 37.50 | 4.02 |
7503 | 11406 | 2.674852 | GACCCGAACGGATAAAAAGGAC | 59.325 | 50.000 | 15.07 | 0.00 | 37.50 | 3.85 |
7504 | 11407 | 2.674747 | CGACCCGAACGGATAAAAAGGA | 60.675 | 50.000 | 15.07 | 0.00 | 37.50 | 3.36 |
7505 | 11408 | 1.662122 | CGACCCGAACGGATAAAAAGG | 59.338 | 52.381 | 15.07 | 0.00 | 37.50 | 3.11 |
7506 | 11409 | 1.061566 | GCGACCCGAACGGATAAAAAG | 59.938 | 52.381 | 15.07 | 0.00 | 37.50 | 2.27 |
7507 | 11410 | 1.077915 | GCGACCCGAACGGATAAAAA | 58.922 | 50.000 | 15.07 | 0.00 | 37.50 | 1.94 |
7508 | 11411 | 0.740516 | GGCGACCCGAACGGATAAAA | 60.741 | 55.000 | 15.07 | 0.00 | 37.50 | 1.52 |
7509 | 11412 | 1.153588 | GGCGACCCGAACGGATAAA | 60.154 | 57.895 | 15.07 | 0.00 | 37.50 | 1.40 |
7510 | 11413 | 2.495866 | GGCGACCCGAACGGATAA | 59.504 | 61.111 | 15.07 | 0.00 | 37.50 | 1.75 |
7526 | 11429 | 2.351336 | GATACAGACAGGCGGACGGG | 62.351 | 65.000 | 0.00 | 0.00 | 0.00 | 5.28 |
7527 | 11430 | 1.065928 | GATACAGACAGGCGGACGG | 59.934 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
7528 | 11431 | 1.065928 | GGATACAGACAGGCGGACG | 59.934 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
7529 | 11432 | 1.065928 | CGGATACAGACAGGCGGAC | 59.934 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
7530 | 11433 | 0.968901 | AACGGATACAGACAGGCGGA | 60.969 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
7531 | 11434 | 0.108329 | AAACGGATACAGACAGGCGG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
7532 | 11435 | 1.722011 | AAAACGGATACAGACAGGCG | 58.278 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
7549 | 11452 | 1.437986 | CGGCCGACCCAAACAAAAA | 59.562 | 52.632 | 24.07 | 0.00 | 0.00 | 1.94 |
7550 | 11453 | 2.491022 | CCGGCCGACCCAAACAAAA | 61.491 | 57.895 | 30.73 | 0.00 | 0.00 | 2.44 |
7551 | 11454 | 2.907917 | CCGGCCGACCCAAACAAA | 60.908 | 61.111 | 30.73 | 0.00 | 0.00 | 2.83 |
7552 | 11455 | 4.192453 | ACCGGCCGACCCAAACAA | 62.192 | 61.111 | 30.73 | 0.00 | 0.00 | 2.83 |
7553 | 11456 | 4.939368 | CACCGGCCGACCCAAACA | 62.939 | 66.667 | 30.73 | 0.00 | 0.00 | 2.83 |
7554 | 11457 | 4.629523 | TCACCGGCCGACCCAAAC | 62.630 | 66.667 | 30.73 | 0.00 | 0.00 | 2.93 |
7555 | 11458 | 4.323477 | CTCACCGGCCGACCCAAA | 62.323 | 66.667 | 30.73 | 4.50 | 0.00 | 3.28 |
7566 | 11469 | 2.742372 | CTTCCGTTGGGCTCACCG | 60.742 | 66.667 | 0.00 | 0.00 | 44.64 | 4.94 |
7567 | 11470 | 3.056328 | GCTTCCGTTGGGCTCACC | 61.056 | 66.667 | 0.00 | 0.00 | 40.81 | 4.02 |
7568 | 11471 | 3.423154 | CGCTTCCGTTGGGCTCAC | 61.423 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
7569 | 11472 | 3.589654 | CTCGCTTCCGTTGGGCTCA | 62.590 | 63.158 | 0.00 | 0.00 | 35.54 | 4.26 |
7570 | 11473 | 2.815647 | CTCGCTTCCGTTGGGCTC | 60.816 | 66.667 | 0.00 | 0.00 | 35.54 | 4.70 |
7571 | 11474 | 3.311110 | TCTCGCTTCCGTTGGGCT | 61.311 | 61.111 | 0.00 | 0.00 | 35.54 | 5.19 |
7572 | 11475 | 3.119096 | GTCTCGCTTCCGTTGGGC | 61.119 | 66.667 | 0.00 | 0.00 | 35.54 | 5.36 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.