Multiple sequence alignment - TraesCS1D01G147500
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS1D01G147500
chr1D
100.000
3276
0
0
1
3276
203537931
203534656
0.000000e+00
6050.0
1
TraesCS1D01G147500
chr1D
84.706
85
10
3
304
386
32780299
32780382
7.530000e-12
82.4
2
TraesCS1D01G147500
chr1A
94.910
1670
63
10
1612
3276
258180824
258179172
0.000000e+00
2593.0
3
TraesCS1D01G147500
chr1A
95.853
651
26
1
914
1563
258181473
258180823
0.000000e+00
1051.0
4
TraesCS1D01G147500
chr1A
91.358
405
29
6
96
497
258186347
258185946
1.720000e-152
549.0
5
TraesCS1D01G147500
chr1A
84.247
438
57
9
488
923
258184280
258183853
1.820000e-112
416.0
6
TraesCS1D01G147500
chr1B
92.916
734
46
5
1515
2247
297477684
297476956
0.000000e+00
1062.0
7
TraesCS1D01G147500
chr1B
93.939
429
22
4
1090
1518
297480459
297480035
0.000000e+00
645.0
8
TraesCS1D01G147500
chr1B
90.031
321
26
3
2201
2521
297476950
297476636
8.460000e-111
411.0
9
TraesCS1D01G147500
chr1B
90.741
216
14
3
1733
1947
297475298
297475088
1.920000e-72
283.0
10
TraesCS1D01G147500
chr4A
85.560
741
102
5
1671
2407
137541259
137541998
0.000000e+00
771.0
11
TraesCS1D01G147500
chr4A
82.701
422
51
9
847
1258
137540345
137540754
4.020000e-94
355.0
12
TraesCS1D01G147500
chr4D
85.617
737
101
5
1675
2407
335334999
335334264
0.000000e+00
769.0
13
TraesCS1D01G147500
chr4D
85.882
85
9
3
304
386
121807809
121807726
1.620000e-13
87.9
14
TraesCS1D01G147500
chr4D
84.706
85
10
3
304
386
347417519
347417602
7.530000e-12
82.4
15
TraesCS1D01G147500
chr4B
85.425
741
104
4
1671
2407
413448031
413447291
0.000000e+00
767.0
16
TraesCS1D01G147500
chr4B
82.415
381
51
9
886
1258
413448918
413448546
5.270000e-83
318.0
17
TraesCS1D01G147500
chr4B
82.143
252
38
5
2685
2931
413447283
413447034
3.310000e-50
209.0
18
TraesCS1D01G147500
chr4B
77.778
342
51
13
1355
1687
413448451
413448126
1.550000e-43
187.0
19
TraesCS1D01G147500
chr4B
84.706
85
10
3
304
386
319382935
319382852
7.530000e-12
82.4
20
TraesCS1D01G147500
chr5A
86.420
81
8
3
308
386
625051900
625051821
5.820000e-13
86.1
21
TraesCS1D01G147500
chr5D
84.706
85
10
3
304
386
160033710
160033793
7.530000e-12
82.4
22
TraesCS1D01G147500
chr3D
84.706
85
10
3
304
386
88285120
88285203
7.530000e-12
82.4
23
TraesCS1D01G147500
chr6D
81.443
97
16
2
298
393
301247506
301247411
9.750000e-11
78.7
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS1D01G147500
chr1D
203534656
203537931
3275
True
6050.00
6050
100.00000
1
3276
1
chr1D.!!$R1
3275
1
TraesCS1D01G147500
chr1A
258179172
258186347
7175
True
1152.25
2593
91.59200
96
3276
4
chr1A.!!$R1
3180
2
TraesCS1D01G147500
chr1B
297475088
297480459
5371
True
600.25
1062
91.90675
1090
2521
4
chr1B.!!$R1
1431
3
TraesCS1D01G147500
chr4A
137540345
137541998
1653
False
563.00
771
84.13050
847
2407
2
chr4A.!!$F1
1560
4
TraesCS1D01G147500
chr4D
335334264
335334999
735
True
769.00
769
85.61700
1675
2407
1
chr4D.!!$R2
732
5
TraesCS1D01G147500
chr4B
413447034
413448918
1884
True
370.25
767
81.94025
886
2931
4
chr4B.!!$R2
2045
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
718
2395
0.099613
CAGACTCCGGTCGTGATCAG
59.9
60.0
0.0
0.0
46.29
2.9
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
2650
9302
0.041982
AGAGTCTCCTCCCCCAAGAC
59.958
60.0
0.0
0.0
38.58
3.01
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
20
21
2.571212
CCCAATTCGTATTAGCAGCCA
58.429
47.619
0.00
0.00
0.00
4.75
21
22
2.948979
CCCAATTCGTATTAGCAGCCAA
59.051
45.455
0.00
0.00
0.00
4.52
22
23
3.243068
CCCAATTCGTATTAGCAGCCAAC
60.243
47.826
0.00
0.00
0.00
3.77
23
24
3.376859
CCAATTCGTATTAGCAGCCAACA
59.623
43.478
0.00
0.00
0.00
3.33
24
25
4.342772
CAATTCGTATTAGCAGCCAACAC
58.657
43.478
0.00
0.00
0.00
3.32
25
26
3.328382
TTCGTATTAGCAGCCAACACT
57.672
42.857
0.00
0.00
0.00
3.55
26
27
2.616960
TCGTATTAGCAGCCAACACTG
58.383
47.619
0.00
0.00
40.80
3.66
32
33
2.333938
CAGCCAACACTGCACTGC
59.666
61.111
0.00
0.00
0.00
4.40
33
34
2.124193
AGCCAACACTGCACTGCA
60.124
55.556
3.11
3.11
36.92
4.41
34
35
2.026590
GCCAACACTGCACTGCAC
59.973
61.111
0.00
0.00
33.79
4.57
35
36
2.328989
CCAACACTGCACTGCACG
59.671
61.111
0.00
0.00
33.79
5.34
36
37
2.328989
CAACACTGCACTGCACGG
59.671
61.111
0.00
0.00
33.79
4.94
37
38
2.179547
CAACACTGCACTGCACGGA
61.180
57.895
0.00
0.00
33.79
4.69
38
39
2.180204
AACACTGCACTGCACGGAC
61.180
57.895
0.00
0.00
33.79
4.79
39
40
3.349006
CACTGCACTGCACGGACC
61.349
66.667
0.00
0.00
33.79
4.46
40
41
3.860605
ACTGCACTGCACGGACCA
61.861
61.111
0.00
0.00
33.79
4.02
41
42
2.591429
CTGCACTGCACGGACCAA
60.591
61.111
0.00
0.00
33.79
3.67
42
43
2.896801
CTGCACTGCACGGACCAAC
61.897
63.158
0.00
0.00
33.79
3.77
43
44
2.591715
GCACTGCACGGACCAACT
60.592
61.111
0.00
0.00
0.00
3.16
44
45
2.607892
GCACTGCACGGACCAACTC
61.608
63.158
0.00
0.00
0.00
3.01
45
46
2.029073
ACTGCACGGACCAACTCG
59.971
61.111
0.00
0.00
0.00
4.18
46
47
2.738521
CTGCACGGACCAACTCGG
60.739
66.667
0.00
0.00
42.50
4.63
47
48
4.308458
TGCACGGACCAACTCGGG
62.308
66.667
0.00
0.00
40.22
5.14
53
54
2.990479
GACCAACTCGGGCCATCT
59.010
61.111
4.39
0.00
36.36
2.90
54
55
1.153349
GACCAACTCGGGCCATCTC
60.153
63.158
4.39
0.00
36.36
2.75
55
56
2.190578
CCAACTCGGGCCATCTCC
59.809
66.667
4.39
0.00
0.00
3.71
56
57
2.190578
CAACTCGGGCCATCTCCC
59.809
66.667
4.39
0.00
43.02
4.30
57
58
2.041265
AACTCGGGCCATCTCCCT
59.959
61.111
4.39
0.00
44.30
4.20
58
59
1.048724
CAACTCGGGCCATCTCCCTA
61.049
60.000
4.39
0.00
44.30
3.53
59
60
0.760945
AACTCGGGCCATCTCCCTAG
60.761
60.000
4.39
0.00
44.30
3.02
60
61
1.910772
CTCGGGCCATCTCCCTAGG
60.911
68.421
4.39
0.06
44.30
3.02
61
62
2.122813
CGGGCCATCTCCCTAGGT
60.123
66.667
4.39
0.00
44.30
3.08
62
63
2.210711
CGGGCCATCTCCCTAGGTC
61.211
68.421
4.39
0.00
44.30
3.85
63
64
1.074471
GGGCCATCTCCCTAGGTCA
60.074
63.158
4.39
0.00
43.13
4.02
64
65
0.474660
GGGCCATCTCCCTAGGTCAT
60.475
60.000
4.39
0.00
43.13
3.06
65
66
0.980423
GGCCATCTCCCTAGGTCATC
59.020
60.000
8.29
0.00
0.00
2.92
66
67
0.980423
GCCATCTCCCTAGGTCATCC
59.020
60.000
8.29
0.00
0.00
3.51
67
68
1.650528
CCATCTCCCTAGGTCATCCC
58.349
60.000
8.29
0.00
0.00
3.85
68
69
1.650528
CATCTCCCTAGGTCATCCCC
58.349
60.000
8.29
0.00
0.00
4.81
69
70
1.132721
CATCTCCCTAGGTCATCCCCA
60.133
57.143
8.29
0.00
0.00
4.96
70
71
1.023719
TCTCCCTAGGTCATCCCCAA
58.976
55.000
8.29
0.00
0.00
4.12
71
72
1.132500
CTCCCTAGGTCATCCCCAAC
58.868
60.000
8.29
0.00
0.00
3.77
72
73
0.327191
TCCCTAGGTCATCCCCAACC
60.327
60.000
8.29
0.00
35.69
3.77
74
75
1.132500
CCTAGGTCATCCCCAACCTC
58.868
60.000
0.00
0.00
42.28
3.85
75
76
1.132500
CTAGGTCATCCCCAACCTCC
58.868
60.000
0.00
0.00
42.28
4.30
76
77
0.722676
TAGGTCATCCCCAACCTCCT
59.277
55.000
0.00
0.00
42.28
3.69
77
78
0.178831
AGGTCATCCCCAACCTCCTT
60.179
55.000
0.00
0.00
42.28
3.36
78
79
0.704664
GGTCATCCCCAACCTCCTTT
59.295
55.000
0.00
0.00
32.54
3.11
79
80
1.920351
GGTCATCCCCAACCTCCTTTA
59.080
52.381
0.00
0.00
32.54
1.85
80
81
2.514160
GGTCATCCCCAACCTCCTTTAT
59.486
50.000
0.00
0.00
32.54
1.40
81
82
3.555966
GTCATCCCCAACCTCCTTTATG
58.444
50.000
0.00
0.00
0.00
1.90
82
83
3.202151
GTCATCCCCAACCTCCTTTATGA
59.798
47.826
0.00
0.00
0.00
2.15
83
84
3.202151
TCATCCCCAACCTCCTTTATGAC
59.798
47.826
0.00
0.00
0.00
3.06
84
85
1.557832
TCCCCAACCTCCTTTATGACG
59.442
52.381
0.00
0.00
0.00
4.35
85
86
1.379527
CCCAACCTCCTTTATGACGC
58.620
55.000
0.00
0.00
0.00
5.19
86
87
1.379527
CCAACCTCCTTTATGACGCC
58.620
55.000
0.00
0.00
0.00
5.68
87
88
1.379527
CAACCTCCTTTATGACGCCC
58.620
55.000
0.00
0.00
0.00
6.13
88
89
0.988832
AACCTCCTTTATGACGCCCA
59.011
50.000
0.00
0.00
0.00
5.36
89
90
1.213296
ACCTCCTTTATGACGCCCAT
58.787
50.000
0.00
0.00
39.25
4.00
90
91
2.404559
ACCTCCTTTATGACGCCCATA
58.595
47.619
0.00
0.00
36.71
2.74
91
92
2.979678
ACCTCCTTTATGACGCCCATAT
59.020
45.455
0.00
0.00
37.56
1.78
92
93
3.244561
ACCTCCTTTATGACGCCCATATG
60.245
47.826
0.00
0.00
37.56
1.78
93
94
2.744202
CTCCTTTATGACGCCCATATGC
59.256
50.000
0.00
0.00
37.56
3.14
94
95
1.812571
CCTTTATGACGCCCATATGCC
59.187
52.381
0.00
0.00
37.56
4.40
168
170
4.126441
ACCAGATAAAGTAGCCCTGGCG
62.126
54.545
0.00
0.00
46.14
5.69
200
202
1.611519
CGTCTCCATCCTCCTCTACC
58.388
60.000
0.00
0.00
0.00
3.18
208
210
1.475403
TCCTCCTCTACCTTCGCTTG
58.525
55.000
0.00
0.00
0.00
4.01
209
211
0.179097
CCTCCTCTACCTTCGCTTGC
60.179
60.000
0.00
0.00
0.00
4.01
235
237
0.833949
CCTCTTTGCCCCTCTAGACC
59.166
60.000
0.00
0.00
0.00
3.85
243
245
2.203308
CCTCTAGACCGCGCCCTA
60.203
66.667
0.00
2.83
0.00
3.53
252
254
3.279875
CGCGCCCTAAGCCATTCC
61.280
66.667
0.00
0.00
38.78
3.01
277
279
3.492353
CCATCCGCCATGGTCCCT
61.492
66.667
14.67
0.00
46.72
4.20
278
280
2.203252
CATCCGCCATGGTCCCTG
60.203
66.667
14.67
2.92
39.52
4.45
287
289
1.918293
ATGGTCCCTGTCCTTCGCA
60.918
57.895
0.00
0.00
0.00
5.10
295
298
2.292267
CCTGTCCTTCGCATGCTATTT
58.708
47.619
17.13
0.00
0.00
1.40
327
330
2.847366
TAGAAATGCGTTGGGCCCCC
62.847
60.000
22.27
9.19
42.61
5.40
336
339
3.579302
TGGGCCCCCAAGTGTGAG
61.579
66.667
22.27
0.00
44.12
3.51
338
341
3.256960
GGCCCCCAAGTGTGAGGA
61.257
66.667
0.00
0.00
0.00
3.71
357
360
7.334421
TGTGAGGATTGTAGAAAGTAGCAATTC
59.666
37.037
0.00
0.00
32.47
2.17
369
372
2.503895
AGCAATTCTCCCTCAAGTGG
57.496
50.000
0.00
0.00
0.00
4.00
424
427
0.105039
ATCCTCGGAATCCAAGCGTC
59.895
55.000
0.00
0.00
0.00
5.19
444
447
4.187694
GTCAGGCTATTGGAGAAGAGTTG
58.812
47.826
0.00
0.00
0.00
3.16
463
466
4.532521
AGTTGTCCAAACTACTAGAGGCAT
59.467
41.667
0.00
0.00
39.28
4.40
468
471
7.630082
TGTCCAAACTACTAGAGGCATATTTT
58.370
34.615
0.00
0.00
0.00
1.82
473
476
5.844004
ACTACTAGAGGCATATTTTGTCCG
58.156
41.667
0.00
0.00
0.00
4.79
525
2202
5.620738
ACCTAGTCATGCATCATGTACTT
57.379
39.130
0.00
0.00
41.98
2.24
534
2211
3.191162
TGCATCATGTACTTGAGTTTGCC
59.809
43.478
22.80
12.12
31.29
4.52
540
2217
2.160205
GTACTTGAGTTTGCCCTTCCC
58.840
52.381
0.00
0.00
0.00
3.97
541
2218
0.178961
ACTTGAGTTTGCCCTTCCCC
60.179
55.000
0.00
0.00
0.00
4.81
544
2221
0.560688
TGAGTTTGCCCTTCCCCTTT
59.439
50.000
0.00
0.00
0.00
3.11
545
2222
0.969149
GAGTTTGCCCTTCCCCTTTG
59.031
55.000
0.00
0.00
0.00
2.77
557
2234
2.402564
TCCCCTTTGAACCAAATGCAA
58.597
42.857
0.00
0.00
32.70
4.08
573
2250
1.640149
TGCAAATCCATCCTCCCTTGA
59.360
47.619
0.00
0.00
0.00
3.02
584
2261
1.912043
CCTCCCTTGATGGTCAGTCTT
59.088
52.381
0.00
0.00
0.00
3.01
592
2269
2.166459
TGATGGTCAGTCTTGTCGATCC
59.834
50.000
0.00
0.00
30.59
3.36
627
2304
0.531090
TCCGTTGTTTCACACCCTCG
60.531
55.000
0.00
0.00
0.00
4.63
631
2308
1.098712
TTGTTTCACACCCTCGCCAC
61.099
55.000
0.00
0.00
0.00
5.01
633
2310
3.485346
TTTCACACCCTCGCCACCC
62.485
63.158
0.00
0.00
0.00
4.61
640
2317
2.597340
CCTCGCCACCCCATGATT
59.403
61.111
0.00
0.00
0.00
2.57
649
2326
2.425668
CCACCCCATGATTTAAACCGAC
59.574
50.000
0.00
0.00
0.00
4.79
650
2327
3.085533
CACCCCATGATTTAAACCGACA
58.914
45.455
0.00
0.00
0.00
4.35
663
2340
2.358322
ACCGACATCAAAACCAAGGT
57.642
45.000
0.00
0.00
0.00
3.50
664
2341
2.227194
ACCGACATCAAAACCAAGGTC
58.773
47.619
0.00
0.00
0.00
3.85
667
2344
1.539827
GACATCAAAACCAAGGTCGGG
59.460
52.381
0.00
0.00
0.00
5.14
677
2354
4.954118
AGGTCGGGCAGTGGTCCA
62.954
66.667
0.00
0.00
39.40
4.02
678
2355
4.394712
GGTCGGGCAGTGGTCCAG
62.395
72.222
0.00
0.00
39.40
3.86
694
2371
2.930562
AGGACCACCCTGTCAGCC
60.931
66.667
0.00
0.00
45.61
4.85
695
2372
2.930562
GGACCACCCTGTCAGCCT
60.931
66.667
0.00
0.00
36.97
4.58
702
2379
2.288778
CCCTGTCAGCCTGAGCAGA
61.289
63.158
19.40
0.00
43.56
4.26
711
2388
2.487428
CTGAGCAGACTCCGGTCG
59.513
66.667
0.00
0.00
46.29
4.79
712
2389
2.282251
TGAGCAGACTCCGGTCGT
60.282
61.111
0.00
0.00
46.29
4.34
716
2393
1.226717
GCAGACTCCGGTCGTGATC
60.227
63.158
0.00
0.00
46.29
2.92
717
2394
1.934220
GCAGACTCCGGTCGTGATCA
61.934
60.000
0.00
0.00
46.29
2.92
718
2395
0.099613
CAGACTCCGGTCGTGATCAG
59.900
60.000
0.00
0.00
46.29
2.90
719
2396
1.226717
GACTCCGGTCGTGATCAGC
60.227
63.158
0.00
0.00
32.47
4.26
720
2397
2.278206
CTCCGGTCGTGATCAGCG
60.278
66.667
0.00
3.36
34.52
5.18
726
2403
1.226717
GTCGTGATCAGCGGAGGAC
60.227
63.158
14.72
3.28
0.00
3.85
760
2437
0.388520
TCAATGTCAGTGAGGCGACG
60.389
55.000
0.00
0.00
34.78
5.12
764
2441
1.135731
GTCAGTGAGGCGACGAGAG
59.864
63.158
0.00
0.00
0.00
3.20
778
2455
0.984995
CGAGAGGAAGGGAAAACCCT
59.015
55.000
1.53
1.53
42.86
4.34
782
2459
1.284198
GAGGAAGGGAAAACCCTACCC
59.716
57.143
8.30
12.12
39.63
3.69
785
2462
1.990327
GAAGGGAAAACCCTACCCAGA
59.010
52.381
8.30
0.00
45.43
3.86
807
2485
3.858638
AGGGGGAAAACCTCATGATAAGT
59.141
43.478
0.00
0.00
44.86
2.24
813
2491
6.318900
GGGAAAACCTCATGATAAGTTACCTG
59.681
42.308
18.00
0.00
35.85
4.00
814
2492
6.318900
GGAAAACCTCATGATAAGTTACCTGG
59.681
42.308
0.00
0.00
0.00
4.45
818
2496
4.656112
CCTCATGATAAGTTACCTGGGTCT
59.344
45.833
0.00
0.00
0.00
3.85
911
2590
3.062466
GGGCTTTCCTTCCGGCAC
61.062
66.667
0.00
0.00
0.00
5.01
1056
5127
1.201429
AGAAGTGGACCGGGAAGCAT
61.201
55.000
6.32
0.00
0.00
3.79
1081
5153
0.336737
ATCTTCCGGTCTGTCCTCCT
59.663
55.000
0.00
0.00
0.00
3.69
1123
5195
3.612955
GCTACTGTTTCTGCTCTCTCGTT
60.613
47.826
0.00
0.00
0.00
3.85
1129
5201
3.735237
TTCTGCTCTCTCGTTTGAACT
57.265
42.857
0.00
0.00
0.00
3.01
1148
5226
6.150332
TGAACTATAATCCCCATCCTCTTGA
58.850
40.000
0.00
0.00
0.00
3.02
1324
5435
1.555967
GGCATTTCCTTGGTGGCTAA
58.444
50.000
0.00
0.00
35.74
3.09
1449
5572
8.246430
AGTTATTAGACCGTTCCAGATGAATA
57.754
34.615
0.00
0.00
34.90
1.75
1555
8038
3.703001
ATTTCCATCCATAGCTACCGG
57.297
47.619
0.00
0.00
0.00
5.28
1575
8058
5.163622
ACCGGAAGATGCATTTGATAAACTG
60.164
40.000
9.46
0.00
0.00
3.16
1596
8079
5.893824
ACTGAATTTGGGGATACATTCTTCC
59.106
40.000
0.00
0.00
39.74
3.46
1687
8281
6.883129
TGTTCACTAACATACACGAATGTTG
58.117
36.000
18.86
13.44
46.77
3.33
1699
8293
6.861065
ACACGAATGTTGAAGTTGTAGAAT
57.139
33.333
0.00
0.00
34.46
2.40
1782
8376
0.745486
TTGATCTGCAGCCGTCCATG
60.745
55.000
9.47
0.00
0.00
3.66
1831
8425
6.038714
GCAGACGGAATTCTTTTCTATTGGAT
59.961
38.462
5.23
0.00
0.00
3.41
1889
8483
6.705863
AATCTTGCTCATTGATTTAGGGAC
57.294
37.500
0.00
0.00
0.00
4.46
1896
8490
6.599244
TGCTCATTGATTTAGGGACAGTTAAG
59.401
38.462
0.00
0.00
0.00
1.85
1899
8493
3.869065
TGATTTAGGGACAGTTAAGCCG
58.131
45.455
0.00
0.00
0.00
5.52
1908
8503
3.925299
GGACAGTTAAGCCGAGTTACTTC
59.075
47.826
0.00
0.00
0.00
3.01
1924
8519
6.407202
AGTTACTTCGTTATCTCCAGCAATT
58.593
36.000
0.00
0.00
0.00
2.32
2203
8801
5.565455
TGATGCATAGGTATGATGGTTCA
57.435
39.130
0.00
0.00
35.75
3.18
2206
8804
4.960938
TGCATAGGTATGATGGTTCAGTC
58.039
43.478
0.95
0.00
35.75
3.51
2346
8996
4.101585
ACATACTGCCTAATCTTGCTGCTA
59.898
41.667
0.00
0.00
0.00
3.49
2451
9101
2.937591
ACAGATTGCGCTGAATGTTTG
58.062
42.857
9.73
2.28
39.20
2.93
2479
9129
2.208132
AGCTCAGTTCGAGAGGAAGA
57.792
50.000
2.73
0.00
45.45
2.87
2502
9152
5.482908
ACACAGTGTAGAATGAGTGGAATC
58.517
41.667
3.69
0.00
0.00
2.52
2504
9154
5.934043
CACAGTGTAGAATGAGTGGAATCAA
59.066
40.000
0.00
0.00
31.76
2.57
2567
9219
4.811555
CTGACGAAACAGGTGAATTTCA
57.188
40.909
0.00
0.00
35.02
2.69
2568
9220
4.776743
CTGACGAAACAGGTGAATTTCAG
58.223
43.478
0.00
0.00
35.02
3.02
2569
9221
3.003275
TGACGAAACAGGTGAATTTCAGC
59.997
43.478
18.55
18.55
44.62
4.26
2604
9256
5.480205
ACCGAAGAAACAGGTCTCTTTATC
58.520
41.667
0.00
0.00
32.01
1.75
2630
9282
1.068895
CAAAATGTGGCTTGCTGGTCA
59.931
47.619
0.00
0.00
0.00
4.02
2641
9293
2.044650
CTGGTCAGCCCCCACATG
60.045
66.667
0.00
0.00
0.00
3.21
2642
9294
2.858476
TGGTCAGCCCCCACATGT
60.858
61.111
0.00
0.00
0.00
3.21
2643
9295
2.044946
GGTCAGCCCCCACATGTC
60.045
66.667
0.00
0.00
0.00
3.06
2644
9296
2.606587
GGTCAGCCCCCACATGTCT
61.607
63.158
0.00
0.00
0.00
3.41
2645
9297
1.078143
GTCAGCCCCCACATGTCTC
60.078
63.158
0.00
0.00
0.00
3.36
2646
9298
2.273449
CAGCCCCCACATGTCTCC
59.727
66.667
0.00
0.00
0.00
3.71
2647
9299
3.017581
AGCCCCCACATGTCTCCC
61.018
66.667
0.00
0.00
0.00
4.30
2648
9300
4.129148
GCCCCCACATGTCTCCCC
62.129
72.222
0.00
0.00
0.00
4.81
2649
9301
3.420482
CCCCCACATGTCTCCCCC
61.420
72.222
0.00
0.00
0.00
5.40
2650
9302
3.797353
CCCCACATGTCTCCCCCG
61.797
72.222
0.00
0.00
0.00
5.73
2811
9572
8.814235
CGTAACTATTATAAGGTTTCACACTGG
58.186
37.037
10.49
0.00
0.00
4.00
3159
10500
4.201724
GCAAACGTTACAGAAGCCTATCAG
60.202
45.833
0.00
0.00
0.00
2.90
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
0
1
2.571212
TGGCTGCTAATACGAATTGGG
58.429
47.619
0.00
0.00
0.00
4.12
1
2
3.376859
TGTTGGCTGCTAATACGAATTGG
59.623
43.478
0.71
0.00
0.00
3.16
2
3
4.094887
AGTGTTGGCTGCTAATACGAATTG
59.905
41.667
17.17
0.00
0.00
2.32
3
4
4.094887
CAGTGTTGGCTGCTAATACGAATT
59.905
41.667
17.17
0.64
0.00
2.17
4
5
3.623060
CAGTGTTGGCTGCTAATACGAAT
59.377
43.478
17.17
0.96
0.00
3.34
5
6
3.000041
CAGTGTTGGCTGCTAATACGAA
59.000
45.455
17.17
0.00
0.00
3.85
6
7
2.616960
CAGTGTTGGCTGCTAATACGA
58.383
47.619
17.17
0.00
0.00
3.43
15
16
2.333938
GCAGTGCAGTGTTGGCTG
59.666
61.111
22.22
8.53
39.37
4.85
16
17
2.124193
TGCAGTGCAGTGTTGGCT
60.124
55.556
22.22
0.00
33.32
4.75
17
18
2.026590
GTGCAGTGCAGTGTTGGC
59.973
61.111
20.42
8.91
40.08
4.52
18
19
2.328989
CGTGCAGTGCAGTGTTGG
59.671
61.111
20.42
8.22
40.08
3.77
19
20
2.179547
TCCGTGCAGTGCAGTGTTG
61.180
57.895
20.42
12.11
40.08
3.33
20
21
2.180204
GTCCGTGCAGTGCAGTGTT
61.180
57.895
20.42
0.00
40.08
3.32
21
22
2.588877
GTCCGTGCAGTGCAGTGT
60.589
61.111
20.42
0.00
40.08
3.55
22
23
3.349006
GGTCCGTGCAGTGCAGTG
61.349
66.667
20.42
17.56
40.08
3.66
23
24
3.399105
TTGGTCCGTGCAGTGCAGT
62.399
57.895
20.42
0.00
40.08
4.40
24
25
2.591429
TTGGTCCGTGCAGTGCAG
60.591
61.111
20.42
12.53
40.08
4.41
25
26
2.899838
GTTGGTCCGTGCAGTGCA
60.900
61.111
15.37
15.37
35.60
4.57
26
27
2.591715
AGTTGGTCCGTGCAGTGC
60.592
61.111
8.58
8.58
0.00
4.40
27
28
2.310233
CGAGTTGGTCCGTGCAGTG
61.310
63.158
0.00
0.00
0.00
3.66
28
29
2.029073
CGAGTTGGTCCGTGCAGT
59.971
61.111
0.00
0.00
0.00
4.40
29
30
2.738521
CCGAGTTGGTCCGTGCAG
60.739
66.667
0.00
0.00
0.00
4.41
30
31
4.308458
CCCGAGTTGGTCCGTGCA
62.308
66.667
0.00
0.00
35.15
4.57
34
35
4.096003
ATGGCCCGAGTTGGTCCG
62.096
66.667
0.00
0.00
35.15
4.79
35
36
2.124695
GATGGCCCGAGTTGGTCC
60.125
66.667
0.00
0.00
35.15
4.46
36
37
1.153349
GAGATGGCCCGAGTTGGTC
60.153
63.158
0.00
0.00
35.15
4.02
37
38
2.670148
GGAGATGGCCCGAGTTGGT
61.670
63.158
0.00
0.00
35.15
3.67
38
39
2.190578
GGAGATGGCCCGAGTTGG
59.809
66.667
0.00
0.00
37.55
3.77
39
40
2.190578
GGGAGATGGCCCGAGTTG
59.809
66.667
0.00
0.00
38.58
3.16
46
47
0.980423
GATGACCTAGGGAGATGGCC
59.020
60.000
14.81
0.00
0.00
5.36
47
48
0.980423
GGATGACCTAGGGAGATGGC
59.020
60.000
14.81
0.00
0.00
4.40
48
49
1.650528
GGGATGACCTAGGGAGATGG
58.349
60.000
14.81
0.00
35.85
3.51
49
50
1.132721
TGGGGATGACCTAGGGAGATG
60.133
57.143
14.81
0.00
40.03
2.90
50
51
1.255033
TGGGGATGACCTAGGGAGAT
58.745
55.000
14.81
1.08
40.03
2.75
51
52
1.023719
TTGGGGATGACCTAGGGAGA
58.976
55.000
14.81
0.00
40.03
3.71
52
53
1.132500
GTTGGGGATGACCTAGGGAG
58.868
60.000
14.81
0.00
40.03
4.30
53
54
0.327191
GGTTGGGGATGACCTAGGGA
60.327
60.000
14.81
0.00
40.03
4.20
54
55
0.327576
AGGTTGGGGATGACCTAGGG
60.328
60.000
14.81
0.00
40.03
3.53
55
56
1.132500
GAGGTTGGGGATGACCTAGG
58.868
60.000
7.41
7.41
40.03
3.02
56
57
1.132500
GGAGGTTGGGGATGACCTAG
58.868
60.000
0.00
0.00
40.03
3.02
57
58
0.722676
AGGAGGTTGGGGATGACCTA
59.277
55.000
0.00
0.00
40.03
3.08
58
59
0.178831
AAGGAGGTTGGGGATGACCT
60.179
55.000
0.00
0.00
40.03
3.85
59
60
0.704664
AAAGGAGGTTGGGGATGACC
59.295
55.000
0.00
0.00
39.11
4.02
60
61
3.202151
TCATAAAGGAGGTTGGGGATGAC
59.798
47.826
0.00
0.00
0.00
3.06
61
62
3.202151
GTCATAAAGGAGGTTGGGGATGA
59.798
47.826
0.00
0.00
0.00
2.92
62
63
3.555966
GTCATAAAGGAGGTTGGGGATG
58.444
50.000
0.00
0.00
0.00
3.51
63
64
2.172717
CGTCATAAAGGAGGTTGGGGAT
59.827
50.000
0.00
0.00
0.00
3.85
64
65
1.557832
CGTCATAAAGGAGGTTGGGGA
59.442
52.381
0.00
0.00
0.00
4.81
65
66
2.017113
GCGTCATAAAGGAGGTTGGGG
61.017
57.143
0.00
0.00
0.00
4.96
66
67
1.379527
GCGTCATAAAGGAGGTTGGG
58.620
55.000
0.00
0.00
0.00
4.12
67
68
1.379527
GGCGTCATAAAGGAGGTTGG
58.620
55.000
0.00
0.00
0.00
3.77
68
69
1.339631
TGGGCGTCATAAAGGAGGTTG
60.340
52.381
0.00
0.00
0.00
3.77
69
70
0.988832
TGGGCGTCATAAAGGAGGTT
59.011
50.000
0.00
0.00
0.00
3.50
70
71
1.213296
ATGGGCGTCATAAAGGAGGT
58.787
50.000
0.00
0.00
33.61
3.85
71
72
3.338249
CATATGGGCGTCATAAAGGAGG
58.662
50.000
0.00
0.00
41.23
4.30
72
73
2.744202
GCATATGGGCGTCATAAAGGAG
59.256
50.000
4.56
0.00
41.23
3.69
73
74
2.552155
GGCATATGGGCGTCATAAAGGA
60.552
50.000
4.56
0.00
41.23
3.36
74
75
1.812571
GGCATATGGGCGTCATAAAGG
59.187
52.381
4.56
0.00
41.23
3.11
84
85
0.467844
TGTGGACATGGCATATGGGC
60.468
55.000
0.00
0.00
43.73
5.36
85
86
2.165167
GATGTGGACATGGCATATGGG
58.835
52.381
0.00
0.00
36.57
4.00
86
87
1.808343
CGATGTGGACATGGCATATGG
59.192
52.381
0.00
0.00
36.57
2.74
87
88
2.481568
GTCGATGTGGACATGGCATATG
59.518
50.000
0.00
0.00
36.57
1.78
88
89
2.550855
GGTCGATGTGGACATGGCATAT
60.551
50.000
0.00
0.00
38.70
1.78
89
90
1.202639
GGTCGATGTGGACATGGCATA
60.203
52.381
0.00
0.00
38.70
3.14
90
91
0.464373
GGTCGATGTGGACATGGCAT
60.464
55.000
0.00
0.00
38.70
4.40
91
92
1.078497
GGTCGATGTGGACATGGCA
60.078
57.895
0.00
0.00
38.70
4.92
92
93
0.464373
ATGGTCGATGTGGACATGGC
60.464
55.000
0.00
0.00
38.70
4.40
93
94
1.302366
CATGGTCGATGTGGACATGG
58.698
55.000
0.00
0.00
38.70
3.66
94
95
1.302366
CCATGGTCGATGTGGACATG
58.698
55.000
2.57
0.00
38.70
3.21
128
129
2.109181
GGAGCGAGTGGTATGGGC
59.891
66.667
0.00
0.00
0.00
5.36
139
140
3.430374
GCTACTTTATCTGGTTGGAGCGA
60.430
47.826
0.00
0.00
0.00
4.93
235
237
3.279875
GGAATGGCTTAGGGCGCG
61.280
66.667
0.00
0.00
42.94
6.86
243
245
1.678970
GGTGCTTCGGGAATGGCTT
60.679
57.895
0.00
0.00
0.00
4.35
252
254
4.776322
TGGCGGATGGTGCTTCGG
62.776
66.667
0.00
0.00
0.00
4.30
295
298
6.282199
ACGCATTTCTACTAGAGAGGAAAA
57.718
37.500
0.00
0.00
34.93
2.29
327
330
6.091441
GCTACTTTCTACAATCCTCACACTTG
59.909
42.308
0.00
0.00
0.00
3.16
330
333
5.479306
TGCTACTTTCTACAATCCTCACAC
58.521
41.667
0.00
0.00
0.00
3.82
331
334
5.738619
TGCTACTTTCTACAATCCTCACA
57.261
39.130
0.00
0.00
0.00
3.58
332
335
7.550906
AGAATTGCTACTTTCTACAATCCTCAC
59.449
37.037
0.00
0.00
31.75
3.51
333
336
7.624549
AGAATTGCTACTTTCTACAATCCTCA
58.375
34.615
0.00
0.00
31.75
3.86
336
339
6.261158
GGGAGAATTGCTACTTTCTACAATCC
59.739
42.308
0.00
0.00
34.96
3.01
338
341
6.963322
AGGGAGAATTGCTACTTTCTACAAT
58.037
36.000
0.00
0.00
34.96
2.71
357
360
1.577736
AGGTCATCCACTTGAGGGAG
58.422
55.000
0.00
0.00
37.96
4.30
396
399
2.395654
GATTCCGAGGATCTGCGTAAC
58.604
52.381
0.00
0.00
0.00
2.50
405
408
0.105039
GACGCTTGGATTCCGAGGAT
59.895
55.000
19.65
0.00
35.62
3.24
424
427
4.187694
GACAACTCTTCTCCAATAGCCTG
58.812
47.826
0.00
0.00
0.00
4.85
432
435
4.654262
AGTAGTTTGGACAACTCTTCTCCA
59.346
41.667
0.00
0.00
31.94
3.86
444
447
7.553044
ACAAAATATGCCTCTAGTAGTTTGGAC
59.447
37.037
12.15
3.91
37.57
4.02
463
466
4.462133
TGTTTGACTTCCCGGACAAAATA
58.538
39.130
0.73
0.00
34.76
1.40
468
471
2.158740
TGAATGTTTGACTTCCCGGACA
60.159
45.455
0.73
0.00
0.00
4.02
473
476
2.484264
CCGTCTGAATGTTTGACTTCCC
59.516
50.000
0.00
0.00
0.00
3.97
525
2202
0.560688
AAAGGGGAAGGGCAAACTCA
59.439
50.000
0.00
0.00
0.00
3.41
534
2211
2.289631
GCATTTGGTTCAAAGGGGAAGG
60.290
50.000
7.07
0.00
36.76
3.46
540
2217
4.387598
TGGATTTGCATTTGGTTCAAAGG
58.612
39.130
0.00
1.33
36.76
3.11
541
2218
5.122711
GGATGGATTTGCATTTGGTTCAAAG
59.877
40.000
0.00
0.00
36.76
2.77
544
2221
3.839490
AGGATGGATTTGCATTTGGTTCA
59.161
39.130
0.00
0.00
0.00
3.18
545
2222
4.436332
GAGGATGGATTTGCATTTGGTTC
58.564
43.478
0.00
0.00
0.00
3.62
573
2250
2.179427
TGGATCGACAAGACTGACCAT
58.821
47.619
0.00
0.00
0.00
3.55
578
2255
5.039984
CACTAGATTGGATCGACAAGACTG
58.960
45.833
0.00
0.00
33.23
3.51
584
2261
4.270008
TGTCTCACTAGATTGGATCGACA
58.730
43.478
0.00
0.00
33.30
4.35
592
2269
5.171476
ACAACGGATTGTCTCACTAGATTG
58.829
41.667
0.00
0.00
46.46
2.67
620
2297
4.802051
CATGGGGTGGCGAGGGTG
62.802
72.222
0.00
0.00
0.00
4.61
627
2304
1.136110
CGGTTTAAATCATGGGGTGGC
59.864
52.381
0.00
0.00
0.00
5.01
631
2308
3.951037
TGATGTCGGTTTAAATCATGGGG
59.049
43.478
0.00
0.00
0.00
4.96
633
2310
6.310224
GGTTTTGATGTCGGTTTAAATCATGG
59.690
38.462
0.00
0.00
0.00
3.66
640
2317
4.645588
ACCTTGGTTTTGATGTCGGTTTAA
59.354
37.500
0.00
0.00
0.00
1.52
649
2326
0.243636
GCCCGACCTTGGTTTTGATG
59.756
55.000
0.00
0.00
0.00
3.07
650
2327
0.178975
TGCCCGACCTTGGTTTTGAT
60.179
50.000
0.00
0.00
0.00
2.57
663
2340
4.631740
TCCTGGACCACTGCCCGA
62.632
66.667
0.00
0.00
0.00
5.14
664
2341
4.394712
GTCCTGGACCACTGCCCG
62.395
72.222
16.14
0.00
0.00
6.13
678
2355
2.930562
AGGCTGACAGGGTGGTCC
60.931
66.667
4.26
0.00
36.97
4.46
690
2367
2.183811
CGGAGTCTGCTCAGGCTG
59.816
66.667
8.93
8.58
44.60
4.85
694
2371
2.336478
ACGACCGGAGTCTGCTCAG
61.336
63.158
9.46
0.00
43.37
3.35
695
2372
2.282251
ACGACCGGAGTCTGCTCA
60.282
61.111
9.46
0.00
43.37
4.26
702
2379
2.885861
GCTGATCACGACCGGAGT
59.114
61.111
9.46
4.67
0.00
3.85
711
2388
1.064946
CTCGTCCTCCGCTGATCAC
59.935
63.158
0.00
0.00
36.19
3.06
712
2389
2.121538
CCTCGTCCTCCGCTGATCA
61.122
63.158
0.00
0.00
36.19
2.92
716
2393
1.595993
TTTCTCCTCGTCCTCCGCTG
61.596
60.000
0.00
0.00
36.19
5.18
717
2394
0.898789
TTTTCTCCTCGTCCTCCGCT
60.899
55.000
0.00
0.00
36.19
5.52
718
2395
0.736672
GTTTTCTCCTCGTCCTCCGC
60.737
60.000
0.00
0.00
36.19
5.54
719
2396
0.889306
AGTTTTCTCCTCGTCCTCCG
59.111
55.000
0.00
0.00
38.13
4.63
720
2397
3.090790
AGTAGTTTTCTCCTCGTCCTCC
58.909
50.000
0.00
0.00
0.00
4.30
721
2398
3.757493
TGAGTAGTTTTCTCCTCGTCCTC
59.243
47.826
0.00
0.00
35.96
3.71
726
2403
5.470368
TGACATTGAGTAGTTTTCTCCTCG
58.530
41.667
0.00
0.00
35.96
4.63
785
2462
3.858638
ACTTATCATGAGGTTTTCCCCCT
59.141
43.478
0.09
0.00
41.86
4.79
840
2518
0.623723
CCAGCCCAGGTAGCCTAAAA
59.376
55.000
0.00
0.00
29.64
1.52
841
2519
1.279025
CCCAGCCCAGGTAGCCTAAA
61.279
60.000
0.00
0.00
29.64
1.85
842
2520
1.692749
CCCAGCCCAGGTAGCCTAA
60.693
63.158
0.00
0.00
29.64
2.69
843
2521
2.040884
CCCAGCCCAGGTAGCCTA
60.041
66.667
0.00
0.00
29.64
3.93
911
2590
3.103911
GACAACGTCGGGACTGCG
61.104
66.667
0.00
0.00
0.00
5.18
998
5069
3.002583
TCCAGTCCGCAGCCATGA
61.003
61.111
0.00
0.00
0.00
3.07
1075
5146
1.670059
GGAGGGAAAGGAAAGGAGGA
58.330
55.000
0.00
0.00
0.00
3.71
1081
5153
1.073284
CGAAGTGGGAGGGAAAGGAAA
59.927
52.381
0.00
0.00
0.00
3.13
1123
5195
6.619437
TCAAGAGGATGGGGATTATAGTTCAA
59.381
38.462
0.00
0.00
0.00
2.69
1290
5369
0.687098
ATGCCCATCAAATTGCCCGA
60.687
50.000
0.00
0.00
0.00
5.14
1348
5459
7.701539
AATTCATTAACACCATTCTGCAGTA
57.298
32.000
14.67
4.08
0.00
2.74
1434
5557
5.215252
ACTACCATATTCATCTGGAACGG
57.785
43.478
0.00
0.00
38.60
4.44
1449
5572
7.500227
CAGATGAACCAATGACATTACTACCAT
59.500
37.037
0.00
1.87
0.00
3.55
1525
8002
8.498054
AGCTATGGATGGAAATAATAACGATG
57.502
34.615
0.00
0.00
0.00
3.84
1575
8058
4.887655
ACGGAAGAATGTATCCCCAAATTC
59.112
41.667
0.00
0.00
31.73
2.17
1581
8064
3.581332
TCCATACGGAAGAATGTATCCCC
59.419
47.826
0.00
0.00
38.83
4.81
1596
8079
5.527214
TGATTCAGGCATTAAACTCCATACG
59.473
40.000
0.00
0.00
0.00
3.06
1639
8122
4.159506
GGGTTTTGCATATCTTTGGCACTA
59.840
41.667
0.00
0.00
37.26
2.74
1831
8425
4.687901
TGAGAGACTCACATTGGTTTGA
57.312
40.909
5.02
0.00
35.39
2.69
1889
8483
3.572584
ACGAAGTAACTCGGCTTAACTG
58.427
45.455
0.00
0.00
41.94
3.16
1896
8490
3.181493
TGGAGATAACGAAGTAACTCGGC
60.181
47.826
0.00
0.00
45.00
5.54
1899
8493
4.995124
TGCTGGAGATAACGAAGTAACTC
58.005
43.478
0.00
0.00
45.00
3.01
1908
8503
5.295431
TCACAAAATTGCTGGAGATAACG
57.705
39.130
0.00
0.00
0.00
3.18
2004
8599
0.321122
CTTCACCTCCTGGCTGTGTC
60.321
60.000
12.96
0.00
36.63
3.67
2107
8703
5.871396
ACGCTTAGAGGAATCCTGATAAA
57.129
39.130
6.50
0.00
31.76
1.40
2203
8801
2.049433
CGTGAAGCCGAACCGACT
60.049
61.111
0.00
0.00
0.00
4.18
2346
8996
6.211584
CACTACATGCCTACTAATCCCAGTAT
59.788
42.308
0.00
0.00
30.78
2.12
2381
9031
5.825593
ACTCACTCCATTAAAGAGAACCA
57.174
39.130
11.68
0.00
35.27
3.67
2451
9101
3.057456
TCTCGAACTGAGCTAAACCTCAC
60.057
47.826
0.00
0.00
44.86
3.51
2479
9129
4.955811
TTCCACTCATTCTACACTGTGT
57.044
40.909
18.51
18.51
0.00
3.72
2604
9256
2.137523
GCAAGCCACATTTTGAGGTTG
58.862
47.619
0.00
0.00
37.14
3.77
2630
9282
3.017581
GGGAGACATGTGGGGGCT
61.018
66.667
1.15
0.00
0.00
5.19
2638
9290
1.221840
CCAAGACGGGGGAGACATG
59.778
63.158
0.00
0.00
0.00
3.21
2639
9291
3.727387
CCAAGACGGGGGAGACAT
58.273
61.111
0.00
0.00
0.00
3.06
2648
9300
2.038975
TCTCCTCCCCCAAGACGG
59.961
66.667
0.00
0.00
0.00
4.79
2649
9301
1.305381
AGTCTCCTCCCCCAAGACG
60.305
63.158
0.00
0.00
43.30
4.18
2650
9302
0.041982
AGAGTCTCCTCCCCCAAGAC
59.958
60.000
0.00
0.00
38.58
3.01
2811
9572
9.774742
GACATCTTCATAGTTTCACCATTTTAC
57.225
33.333
0.00
0.00
0.00
2.01
2966
9732
4.508662
ACTGTTGCTTATCTTAGTGAGCC
58.491
43.478
0.00
0.00
34.30
4.70
3135
10476
0.865769
AGGCTTCTGTAACGTTTGCG
59.134
50.000
5.91
0.00
44.93
4.85
3144
10485
3.954904
GACTGGACTGATAGGCTTCTGTA
59.045
47.826
0.00
0.00
0.00
2.74
3159
10500
4.370364
TGCAAGTTTTGAAAGACTGGAC
57.630
40.909
0.00
0.00
0.00
4.02
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.