Multiple sequence alignment - TraesCS1D01G145100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G145100 chr1D 100.000 3503 0 0 1 3503 200438596 200442098 0.000000e+00 6469.0
1 TraesCS1D01G145100 chr1B 92.284 2229 100 33 894 3072 286975908 286973702 0.000000e+00 3097.0
2 TraesCS1D01G145100 chr1B 89.623 530 51 3 1 530 287012347 287011822 0.000000e+00 671.0
3 TraesCS1D01G145100 chr1B 90.189 265 12 4 3179 3436 286954314 286954057 2.020000e-87 333.0
4 TraesCS1D01G145100 chr1B 76.895 541 94 22 3 530 205881111 205880589 9.580000e-71 278.0
5 TraesCS1D01G145100 chr1B 91.156 147 6 5 739 881 286976247 286976104 3.570000e-45 193.0
6 TraesCS1D01G145100 chr1B 91.339 127 11 0 530 656 287011671 287011545 1.290000e-39 174.0
7 TraesCS1D01G145100 chr1B 94.000 50 3 0 663 712 286976295 286976246 3.750000e-10 76.8
8 TraesCS1D01G145100 chr1A 91.194 1374 89 16 668 2019 253720179 253721542 0.000000e+00 1838.0
9 TraesCS1D01G145100 chr1A 94.157 753 37 6 2142 2889 253721539 253722289 0.000000e+00 1140.0
10 TraesCS1D01G145100 chr1A 89.043 648 66 4 1 648 253719337 253719979 0.000000e+00 798.0
11 TraesCS1D01G145100 chr1A 89.394 66 6 1 3127 3191 485564101 485564166 8.060000e-12 82.4
12 TraesCS1D01G145100 chr5A 95.062 243 12 0 1000 1242 677131728 677131486 1.970000e-102 383.0
13 TraesCS1D01G145100 chr5A 84.733 262 38 2 2243 2503 677130429 677130169 9.640000e-66 261.0
14 TraesCS1D01G145100 chr5A 85.333 75 11 0 3127 3201 377936879 377936953 1.040000e-10 78.7
15 TraesCS1D01G145100 chr4D 95.062 243 12 0 1000 1242 497174976 497174734 1.970000e-102 383.0
16 TraesCS1D01G145100 chr4D 77.297 555 97 22 6 548 481209296 481208759 2.040000e-77 300.0
17 TraesCS1D01G145100 chr4D 83.193 238 34 5 297 533 465155574 465155806 2.740000e-51 213.0
18 TraesCS1D01G145100 chr4B 94.650 243 13 0 1000 1242 637981049 637980807 9.180000e-101 377.0
19 TraesCS1D01G145100 chr4B 88.546 227 21 1 3242 3463 522339735 522339961 1.600000e-68 270.0
20 TraesCS1D01G145100 chr5D 77.222 540 94 21 6 532 323554693 323554170 4.420000e-74 289.0
21 TraesCS1D01G145100 chr3B 85.305 279 27 7 3238 3502 260317715 260317993 3.440000e-70 276.0
22 TraesCS1D01G145100 chr3B 91.803 61 5 0 3125 3185 56031793 56031853 6.230000e-13 86.1
23 TraesCS1D01G145100 chr3B 87.500 72 5 4 3127 3197 284422002 284422070 2.900000e-11 80.5
24 TraesCS1D01G145100 chr7D 85.000 280 27 5 3238 3502 45536710 45536989 1.600000e-68 270.0
25 TraesCS1D01G145100 chr7D 82.971 276 30 10 3238 3500 257510071 257510342 2.100000e-57 233.0
26 TraesCS1D01G145100 chr5B 87.013 231 25 3 3238 3463 668464856 668465086 4.490000e-64 255.0
27 TraesCS1D01G145100 chr4A 86.463 229 25 4 3238 3461 30187385 30187612 2.700000e-61 246.0
28 TraesCS1D01G145100 chr4A 81.752 274 35 11 3241 3500 38833223 38832951 7.620000e-52 215.0
29 TraesCS1D01G145100 chr7A 83.456 272 29 10 3241 3500 277749359 277749092 4.520000e-59 239.0
30 TraesCS1D01G145100 chr2D 94.828 58 3 0 3127 3184 572047827 572047770 1.340000e-14 91.6
31 TraesCS1D01G145100 chr6D 89.552 67 7 0 3116 3182 42512903 42512837 6.230000e-13 86.1
32 TraesCS1D01G145100 chr7B 87.500 72 9 0 3111 3182 145742106 145742035 2.240000e-12 84.2
33 TraesCS1D01G145100 chr2B 87.143 70 9 0 3113 3182 338749681 338749612 2.900000e-11 80.5
34 TraesCS1D01G145100 chr2B 86.301 73 9 1 3110 3182 722402600 722402529 1.040000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G145100 chr1D 200438596 200442098 3502 False 6469.000000 6469 100.000000 1 3503 1 chr1D.!!$F1 3502
1 TraesCS1D01G145100 chr1B 286973702 286976295 2593 True 1122.266667 3097 92.480000 663 3072 3 chr1B.!!$R3 2409
2 TraesCS1D01G145100 chr1B 287011545 287012347 802 True 422.500000 671 90.481000 1 656 2 chr1B.!!$R4 655
3 TraesCS1D01G145100 chr1B 205880589 205881111 522 True 278.000000 278 76.895000 3 530 1 chr1B.!!$R1 527
4 TraesCS1D01G145100 chr1A 253719337 253722289 2952 False 1258.666667 1838 91.464667 1 2889 3 chr1A.!!$F2 2888
5 TraesCS1D01G145100 chr5A 677130169 677131728 1559 True 322.000000 383 89.897500 1000 2503 2 chr5A.!!$R1 1503
6 TraesCS1D01G145100 chr4D 481208759 481209296 537 True 300.000000 300 77.297000 6 548 1 chr4D.!!$R1 542
7 TraesCS1D01G145100 chr5D 323554170 323554693 523 True 289.000000 289 77.222000 6 532 1 chr5D.!!$R1 526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
126 132 0.331616 ACATGGTCCCAAAGGTAGCC 59.668 55.000 0.0 0.0 0.0 3.93 F
156 163 1.003118 CAGGGGTGATTTTGAGTCCGA 59.997 52.381 0.0 0.0 0.0 4.55 F
904 1436 1.417890 CCCCCACCACAGAGCTATAAG 59.582 57.143 0.0 0.0 0.0 1.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1322 1860 0.248498 ATACCACGACTGCGACATCG 60.248 55.0 0.00 0.0 43.97 3.84 R
1327 1865 1.019673 GGAGTATACCACGACTGCGA 58.980 55.0 0.00 0.0 41.64 5.10 R
2863 3925 0.107214 CAATCCCCGAAGCTAAGGCA 60.107 55.0 2.04 0.0 41.70 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 8.886719 GGTTGAACATTACTACTTATGTTACCC 58.113 37.037 0.00 0.00 43.11 3.69
88 89 4.142093 TGTTACCCGAGGAGTAATGTAAGC 60.142 45.833 6.52 0.00 32.62 3.09
102 103 9.151471 GAGTAATGTAAGCTGAAGTGAAACATA 57.849 33.333 0.00 0.00 41.43 2.29
114 115 4.579869 AGTGAAACATAGTGGACATGGTC 58.420 43.478 0.00 0.00 41.43 4.02
115 116 3.689649 GTGAAACATAGTGGACATGGTCC 59.310 47.826 8.45 8.45 44.88 4.46
126 132 0.331616 ACATGGTCCCAAAGGTAGCC 59.668 55.000 0.00 0.00 0.00 3.93
146 153 1.759445 CGAGAGATGTCAGGGGTGATT 59.241 52.381 0.00 0.00 0.00 2.57
152 159 3.331889 AGATGTCAGGGGTGATTTTGAGT 59.668 43.478 0.00 0.00 0.00 3.41
156 163 1.003118 CAGGGGTGATTTTGAGTCCGA 59.997 52.381 0.00 0.00 0.00 4.55
163 170 1.647702 GATTTTGAGTCCGACGACGAC 59.352 52.381 9.28 5.39 44.28 4.34
246 261 3.065371 GGGCAATGCAGTGTGTATTACTC 59.935 47.826 16.47 0.00 30.93 2.59
365 381 6.727394 TCATTTACTTAGGCACTTACCCATT 58.273 36.000 0.00 0.00 41.75 3.16
568 735 6.645415 GTGTAGGATTGTCATATAGAAACCCG 59.355 42.308 0.00 0.00 0.00 5.28
657 824 8.770850 TTTAAGTGCACGTGTTATTCTAAAAC 57.229 30.769 18.38 0.00 0.00 2.43
658 825 5.994887 AGTGCACGTGTTATTCTAAAACA 57.005 34.783 18.38 0.00 34.56 2.83
659 826 6.554334 AGTGCACGTGTTATTCTAAAACAT 57.446 33.333 18.38 0.00 38.95 2.71
660 827 6.370593 AGTGCACGTGTTATTCTAAAACATG 58.629 36.000 18.38 6.62 45.30 3.21
706 1053 8.092687 AGTAGAGCACTAGTTTTATTTTTCCGA 58.907 33.333 0.00 0.00 34.98 4.55
712 1059 8.715088 GCACTAGTTTTATTTTTCCGAGAGTTA 58.285 33.333 0.00 0.00 0.00 2.24
815 1163 4.133526 TGGGGTATCAATTCCACCAAAA 57.866 40.909 2.88 0.00 33.78 2.44
823 1171 5.710513 TCAATTCCACCAAAAGTCTCATG 57.289 39.130 0.00 0.00 0.00 3.07
824 1172 4.022068 TCAATTCCACCAAAAGTCTCATGC 60.022 41.667 0.00 0.00 0.00 4.06
904 1436 1.417890 CCCCCACCACAGAGCTATAAG 59.582 57.143 0.00 0.00 0.00 1.73
1294 1832 4.910956 GCACAGCCACTGTCGATA 57.089 55.556 0.00 0.00 43.43 2.92
1295 1833 2.373938 GCACAGCCACTGTCGATAC 58.626 57.895 0.00 0.00 43.43 2.24
1316 1854 1.602771 GTCCCTGGGGTACTTGCTC 59.397 63.158 14.00 0.00 36.47 4.26
1322 1860 3.985027 CTGGGGTACTTGCTCCACAGC 62.985 61.905 0.47 0.00 46.18 4.40
1339 1877 2.126463 CGATGTCGCAGTCGTGGT 60.126 61.111 0.00 0.00 36.96 4.16
1341 1879 0.248498 CGATGTCGCAGTCGTGGTAT 60.248 55.000 0.00 0.00 36.96 2.73
1425 2149 5.174037 AGTAGCTGTAATGGGCTGTAAAA 57.826 39.130 0.00 0.00 39.31 1.52
1462 2186 0.613260 CTGCCTGCTTGGTAGGTGTA 59.387 55.000 6.54 0.00 43.67 2.90
1495 2219 2.631160 TTAATGGCGATAGTGTGGGG 57.369 50.000 0.00 0.00 39.35 4.96
1582 2314 6.045072 TGGTTGTAGTAATCCGAGATGTTT 57.955 37.500 0.00 0.00 0.00 2.83
1645 2379 1.609072 GGGTTGAGGCTGAAGTTGTTC 59.391 52.381 0.00 0.00 0.00 3.18
1646 2380 2.297701 GGTTGAGGCTGAAGTTGTTCA 58.702 47.619 0.00 0.00 40.55 3.18
1843 2592 3.118542 CTGCTTTGTTGAGGAAAACAGC 58.881 45.455 0.00 0.00 40.93 4.40
1844 2593 2.760092 TGCTTTGTTGAGGAAAACAGCT 59.240 40.909 0.00 0.00 40.93 4.24
1845 2594 3.195396 TGCTTTGTTGAGGAAAACAGCTT 59.805 39.130 0.00 0.00 40.93 3.74
1901 2655 0.035152 TTCTGCTGTGGCCCTGTATG 60.035 55.000 0.00 0.00 37.74 2.39
1905 2659 0.109342 GCTGTGGCCCTGTATGCTAT 59.891 55.000 0.00 0.00 0.00 2.97
1908 2662 1.140852 TGTGGCCCTGTATGCTATCAC 59.859 52.381 0.00 0.00 0.00 3.06
1909 2663 1.417890 GTGGCCCTGTATGCTATCACT 59.582 52.381 0.00 0.00 0.00 3.41
1992 2746 6.263168 TGTTTTGCCCTTTGTTTTCTTTGAAA 59.737 30.769 0.00 0.00 0.00 2.69
2055 2809 4.653801 TGCTCATGGTAATAGGCTAGAACA 59.346 41.667 0.00 0.00 0.00 3.18
2056 2810 4.991687 GCTCATGGTAATAGGCTAGAACAC 59.008 45.833 0.00 0.00 0.00 3.32
2112 2867 8.424133 AGCATTTCTTTTTGTCAACTTATCCTT 58.576 29.630 0.00 0.00 0.00 3.36
2119 2874 9.346725 CTTTTTGTCAACTTATCCTTATGCTTC 57.653 33.333 0.00 0.00 0.00 3.86
2123 2878 6.595326 TGTCAACTTATCCTTATGCTTCTGTG 59.405 38.462 0.00 0.00 0.00 3.66
2128 2883 1.280133 TCCTTATGCTTCTGTGCAGCT 59.720 47.619 0.00 0.00 46.71 4.24
2131 2886 3.691118 CCTTATGCTTCTGTGCAGCTTTA 59.309 43.478 0.00 0.00 46.71 1.85
2175 2930 8.544622 TCTAGTGGAACATACCAATTTGTATCA 58.455 33.333 0.00 0.00 44.52 2.15
2575 3629 5.946942 ATGAGTAGGATTTGCTCTCTGAA 57.053 39.130 0.00 0.00 39.10 3.02
2577 3631 4.774726 TGAGTAGGATTTGCTCTCTGAACT 59.225 41.667 0.00 0.00 39.10 3.01
2735 3789 1.981256 TGCCTCCAAAGGTTCACTTC 58.019 50.000 0.00 0.00 45.34 3.01
2863 3925 7.692460 TTCTTGATCTACATCTTGTTTGCAT 57.308 32.000 0.00 0.00 0.00 3.96
2874 3936 3.057315 TCTTGTTTGCATGCCTTAGCTTC 60.057 43.478 16.68 0.00 40.80 3.86
2920 3982 6.864685 TGATGTTGATTTCTGAAATCTTGTGC 59.135 34.615 31.80 22.00 45.85 4.57
2982 4044 2.803956 ACAATTCGAACGTACCCACTTG 59.196 45.455 0.00 0.00 0.00 3.16
2986 4048 0.668401 CGAACGTACCCACTTGTCCC 60.668 60.000 0.00 0.00 0.00 4.46
2987 4049 0.683412 GAACGTACCCACTTGTCCCT 59.317 55.000 0.00 0.00 0.00 4.20
2988 4050 0.683412 AACGTACCCACTTGTCCCTC 59.317 55.000 0.00 0.00 0.00 4.30
2989 4051 0.470456 ACGTACCCACTTGTCCCTCA 60.470 55.000 0.00 0.00 0.00 3.86
2990 4052 0.037605 CGTACCCACTTGTCCCTCAC 60.038 60.000 0.00 0.00 0.00 3.51
2991 4053 1.349067 GTACCCACTTGTCCCTCACT 58.651 55.000 0.00 0.00 0.00 3.41
2993 4055 0.765510 ACCCACTTGTCCCTCACTTC 59.234 55.000 0.00 0.00 0.00 3.01
2994 4056 0.764890 CCCACTTGTCCCTCACTTCA 59.235 55.000 0.00 0.00 0.00 3.02
2995 4057 1.543429 CCCACTTGTCCCTCACTTCAC 60.543 57.143 0.00 0.00 0.00 3.18
2996 4058 1.140852 CCACTTGTCCCTCACTTCACA 59.859 52.381 0.00 0.00 0.00 3.58
2997 4059 2.224621 CCACTTGTCCCTCACTTCACAT 60.225 50.000 0.00 0.00 0.00 3.21
2998 4060 3.007940 CCACTTGTCCCTCACTTCACATA 59.992 47.826 0.00 0.00 0.00 2.29
3000 4062 5.248640 CACTTGTCCCTCACTTCACATATT 58.751 41.667 0.00 0.00 0.00 1.28
3003 4065 5.698741 TGTCCCTCACTTCACATATTCAT 57.301 39.130 0.00 0.00 0.00 2.57
3004 4066 6.065976 TGTCCCTCACTTCACATATTCATT 57.934 37.500 0.00 0.00 0.00 2.57
3005 4067 6.484288 TGTCCCTCACTTCACATATTCATTT 58.516 36.000 0.00 0.00 0.00 2.32
3006 4068 6.599244 TGTCCCTCACTTCACATATTCATTTC 59.401 38.462 0.00 0.00 0.00 2.17
3007 4069 6.599244 GTCCCTCACTTCACATATTCATTTCA 59.401 38.462 0.00 0.00 0.00 2.69
3008 4070 6.599244 TCCCTCACTTCACATATTCATTTCAC 59.401 38.462 0.00 0.00 0.00 3.18
3009 4071 6.375174 CCCTCACTTCACATATTCATTTCACA 59.625 38.462 0.00 0.00 0.00 3.58
3010 4072 7.414873 CCCTCACTTCACATATTCATTTCACAG 60.415 40.741 0.00 0.00 0.00 3.66
3011 4073 7.335171 CCTCACTTCACATATTCATTTCACAGA 59.665 37.037 0.00 0.00 0.00 3.41
3012 4074 8.620116 TCACTTCACATATTCATTTCACAGAA 57.380 30.769 0.00 0.00 0.00 3.02
3021 4083 4.200838 TCATTTCACAGAAGTCGGCATA 57.799 40.909 0.00 0.00 0.00 3.14
3030 4092 3.941483 CAGAAGTCGGCATATTGGAACTT 59.059 43.478 0.00 0.00 0.00 2.66
3040 4102 6.404623 CGGCATATTGGAACTTCTTTCATGAA 60.405 38.462 3.38 3.38 35.70 2.57
3067 4129 4.164981 TGATTAGTTGACTACCCACCACT 58.835 43.478 0.00 0.00 0.00 4.00
3072 4134 3.394606 AGTTGACTACCCACCACTTGAAT 59.605 43.478 0.00 0.00 0.00 2.57
3073 4135 4.141251 AGTTGACTACCCACCACTTGAATT 60.141 41.667 0.00 0.00 0.00 2.17
3074 4136 4.015872 TGACTACCCACCACTTGAATTC 57.984 45.455 0.00 0.00 0.00 2.17
3075 4137 3.244770 TGACTACCCACCACTTGAATTCC 60.245 47.826 2.27 0.00 0.00 3.01
3076 4138 2.041216 ACTACCCACCACTTGAATTCCC 59.959 50.000 2.27 0.00 0.00 3.97
3077 4139 0.856982 ACCCACCACTTGAATTCCCA 59.143 50.000 2.27 0.00 0.00 4.37
3078 4140 1.219213 ACCCACCACTTGAATTCCCAA 59.781 47.619 2.27 0.00 0.00 4.12
3079 4141 1.895131 CCCACCACTTGAATTCCCAAG 59.105 52.381 2.27 4.22 46.61 3.61
3086 4148 3.565905 CTTGAATTCCCAAGTGACAGC 57.434 47.619 2.27 0.00 38.87 4.40
3087 4149 2.655090 TGAATTCCCAAGTGACAGCA 57.345 45.000 2.27 0.00 0.00 4.41
3088 4150 2.942804 TGAATTCCCAAGTGACAGCAA 58.057 42.857 2.27 0.00 0.00 3.91
3089 4151 3.499338 TGAATTCCCAAGTGACAGCAAT 58.501 40.909 2.27 0.00 0.00 3.56
3090 4152 3.896888 TGAATTCCCAAGTGACAGCAATT 59.103 39.130 2.27 0.00 31.56 2.32
3091 4153 4.344679 TGAATTCCCAAGTGACAGCAATTT 59.655 37.500 2.27 0.00 28.37 1.82
3092 4154 4.961438 ATTCCCAAGTGACAGCAATTTT 57.039 36.364 0.00 0.00 28.37 1.82
3093 4155 4.751767 TTCCCAAGTGACAGCAATTTTT 57.248 36.364 0.00 0.00 28.37 1.94
3094 4156 4.057406 TCCCAAGTGACAGCAATTTTTG 57.943 40.909 0.00 0.00 28.37 2.44
3109 4171 5.972018 CAATTTTTGCGCTTTATGTTGTCA 58.028 33.333 9.73 0.00 0.00 3.58
3110 4172 6.417327 CAATTTTTGCGCTTTATGTTGTCAA 58.583 32.000 9.73 0.00 0.00 3.18
3111 4173 5.633996 TTTTTGCGCTTTATGTTGTCAAG 57.366 34.783 9.73 0.00 0.00 3.02
3112 4174 3.980646 TTGCGCTTTATGTTGTCAAGT 57.019 38.095 9.73 0.00 0.00 3.16
3113 4175 5.425577 TTTGCGCTTTATGTTGTCAAGTA 57.574 34.783 9.73 0.00 0.00 2.24
3114 4176 4.398549 TGCGCTTTATGTTGTCAAGTAC 57.601 40.909 9.73 0.00 0.00 2.73
3115 4177 4.062293 TGCGCTTTATGTTGTCAAGTACT 58.938 39.130 9.73 0.00 0.00 2.73
3116 4178 4.151689 TGCGCTTTATGTTGTCAAGTACTC 59.848 41.667 9.73 0.00 0.00 2.59
3117 4179 4.435651 GCGCTTTATGTTGTCAAGTACTCC 60.436 45.833 0.00 0.00 0.00 3.85
3118 4180 4.092968 CGCTTTATGTTGTCAAGTACTCCC 59.907 45.833 0.00 0.00 0.00 4.30
3119 4181 5.001232 GCTTTATGTTGTCAAGTACTCCCA 58.999 41.667 0.00 0.00 0.00 4.37
3120 4182 5.472137 GCTTTATGTTGTCAAGTACTCCCAA 59.528 40.000 0.00 0.00 0.00 4.12
3121 4183 6.567891 GCTTTATGTTGTCAAGTACTCCCAAC 60.568 42.308 18.28 18.28 36.74 3.77
3122 4184 2.828877 TGTTGTCAAGTACTCCCAACG 58.171 47.619 19.13 0.00 38.53 4.10
3123 4185 2.168936 TGTTGTCAAGTACTCCCAACGT 59.831 45.455 19.13 0.00 38.53 3.99
3124 4186 3.200483 GTTGTCAAGTACTCCCAACGTT 58.800 45.455 13.27 0.00 0.00 3.99
3125 4187 3.102052 TGTCAAGTACTCCCAACGTTC 57.898 47.619 0.00 0.00 0.00 3.95
3126 4188 2.696707 TGTCAAGTACTCCCAACGTTCT 59.303 45.455 0.00 0.00 0.00 3.01
3127 4189 3.890756 TGTCAAGTACTCCCAACGTTCTA 59.109 43.478 0.00 0.00 0.00 2.10
3128 4190 4.022589 TGTCAAGTACTCCCAACGTTCTAG 60.023 45.833 0.00 0.00 0.00 2.43
3129 4191 4.217118 GTCAAGTACTCCCAACGTTCTAGA 59.783 45.833 0.00 0.00 0.00 2.43
3130 4192 5.014858 TCAAGTACTCCCAACGTTCTAGAT 58.985 41.667 0.00 0.00 0.00 1.98
3131 4193 5.479375 TCAAGTACTCCCAACGTTCTAGATT 59.521 40.000 0.00 0.00 0.00 2.40
3132 4194 5.997384 AGTACTCCCAACGTTCTAGATTT 57.003 39.130 0.00 0.00 0.00 2.17
3133 4195 7.177216 TCAAGTACTCCCAACGTTCTAGATTTA 59.823 37.037 0.00 0.00 0.00 1.40
3134 4196 7.657023 AGTACTCCCAACGTTCTAGATTTAT 57.343 36.000 0.00 0.00 0.00 1.40
3135 4197 7.714703 AGTACTCCCAACGTTCTAGATTTATC 58.285 38.462 0.00 0.00 0.00 1.75
3136 4198 5.915175 ACTCCCAACGTTCTAGATTTATCC 58.085 41.667 0.00 0.00 0.00 2.59
3137 4199 4.940463 TCCCAACGTTCTAGATTTATCCG 58.060 43.478 0.00 0.00 0.00 4.18
3138 4200 4.403432 TCCCAACGTTCTAGATTTATCCGT 59.597 41.667 0.00 0.00 0.00 4.69
3139 4201 5.593909 TCCCAACGTTCTAGATTTATCCGTA 59.406 40.000 0.00 0.00 0.00 4.02
3140 4202 6.266103 TCCCAACGTTCTAGATTTATCCGTAT 59.734 38.462 0.00 0.00 0.00 3.06
3141 4203 6.585322 CCCAACGTTCTAGATTTATCCGTATC 59.415 42.308 0.00 0.00 0.00 2.24
3142 4204 7.368833 CCAACGTTCTAGATTTATCCGTATCT 58.631 38.462 0.00 0.00 35.41 1.98
3143 4205 8.509690 CCAACGTTCTAGATTTATCCGTATCTA 58.490 37.037 0.00 0.00 33.38 1.98
3144 4206 9.544314 CAACGTTCTAGATTTATCCGTATCTAG 57.456 37.037 0.00 11.19 46.07 2.43
3158 4220 8.693120 ATCCGTATCTAGACAAATCTAAGACA 57.307 34.615 0.00 0.00 36.98 3.41
3159 4221 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
3160 4222 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
3161 4223 8.622157 CCGTATCTAGACAAATCTAAGACAAGA 58.378 37.037 0.00 0.00 36.98 3.02
3169 4231 9.495572 AGACAAATCTAAGACAAGAACTTTAGG 57.504 33.333 0.00 0.00 31.46 2.69
3170 4232 9.490379 GACAAATCTAAGACAAGAACTTTAGGA 57.510 33.333 0.00 0.00 0.00 2.94
3171 4233 9.274206 ACAAATCTAAGACAAGAACTTTAGGAC 57.726 33.333 0.00 0.00 0.00 3.85
3172 4234 8.436200 CAAATCTAAGACAAGAACTTTAGGACG 58.564 37.037 0.00 0.00 0.00 4.79
3173 4235 6.022163 TCTAAGACAAGAACTTTAGGACGG 57.978 41.667 0.00 0.00 0.00 4.79
3174 4236 4.950205 AAGACAAGAACTTTAGGACGGA 57.050 40.909 0.00 0.00 0.00 4.69
3175 4237 4.950205 AGACAAGAACTTTAGGACGGAA 57.050 40.909 0.00 0.00 0.00 4.30
3176 4238 4.884247 AGACAAGAACTTTAGGACGGAAG 58.116 43.478 0.00 0.00 0.00 3.46
3177 4239 3.995048 GACAAGAACTTTAGGACGGAAGG 59.005 47.826 0.00 0.00 0.00 3.46
3178 4240 3.644738 ACAAGAACTTTAGGACGGAAGGA 59.355 43.478 0.00 0.00 0.00 3.36
3179 4241 4.246458 CAAGAACTTTAGGACGGAAGGAG 58.754 47.826 0.00 0.00 0.00 3.69
3180 4242 3.508426 AGAACTTTAGGACGGAAGGAGT 58.492 45.455 0.00 0.00 0.00 3.85
3181 4243 4.670765 AGAACTTTAGGACGGAAGGAGTA 58.329 43.478 0.00 0.00 0.00 2.59
3182 4244 5.082425 AGAACTTTAGGACGGAAGGAGTAA 58.918 41.667 0.00 0.00 0.00 2.24
3183 4245 5.720520 AGAACTTTAGGACGGAAGGAGTAAT 59.279 40.000 0.00 0.00 0.00 1.89
3184 4246 6.212993 AGAACTTTAGGACGGAAGGAGTAATT 59.787 38.462 0.00 0.00 0.00 1.40
3185 4247 5.975282 ACTTTAGGACGGAAGGAGTAATTC 58.025 41.667 0.00 0.00 0.00 2.17
3186 4248 5.482878 ACTTTAGGACGGAAGGAGTAATTCA 59.517 40.000 0.00 0.00 0.00 2.57
3187 4249 6.156429 ACTTTAGGACGGAAGGAGTAATTCAT 59.844 38.462 0.00 0.00 0.00 2.57
3188 4250 6.555463 TTAGGACGGAAGGAGTAATTCATT 57.445 37.500 0.00 0.00 31.33 2.57
3189 4251 5.437191 AGGACGGAAGGAGTAATTCATTT 57.563 39.130 0.00 0.00 28.22 2.32
3190 4252 5.186198 AGGACGGAAGGAGTAATTCATTTG 58.814 41.667 0.00 0.00 28.22 2.32
3191 4253 4.201920 GGACGGAAGGAGTAATTCATTTGC 60.202 45.833 0.00 0.00 28.22 3.68
3192 4254 4.589908 ACGGAAGGAGTAATTCATTTGCT 58.410 39.130 0.00 0.00 32.37 3.91
3193 4255 5.741011 ACGGAAGGAGTAATTCATTTGCTA 58.259 37.500 0.00 0.00 29.51 3.49
3194 4256 5.817816 ACGGAAGGAGTAATTCATTTGCTAG 59.182 40.000 0.00 0.00 29.51 3.42
3195 4257 5.817816 CGGAAGGAGTAATTCATTTGCTAGT 59.182 40.000 0.00 0.00 29.51 2.57
3196 4258 6.316390 CGGAAGGAGTAATTCATTTGCTAGTT 59.684 38.462 0.00 0.00 29.51 2.24
3197 4259 7.475840 GGAAGGAGTAATTCATTTGCTAGTTG 58.524 38.462 0.00 0.00 29.51 3.16
3198 4260 7.121315 GGAAGGAGTAATTCATTTGCTAGTTGT 59.879 37.037 0.00 0.00 29.51 3.32
3199 4261 7.383102 AGGAGTAATTCATTTGCTAGTTGTG 57.617 36.000 0.00 0.00 29.51 3.33
3200 4262 6.030228 GGAGTAATTCATTTGCTAGTTGTGC 58.970 40.000 0.00 0.00 29.51 4.57
3201 4263 6.127897 GGAGTAATTCATTTGCTAGTTGTGCT 60.128 38.462 0.00 0.00 29.51 4.40
3202 4264 7.219484 AGTAATTCATTTGCTAGTTGTGCTT 57.781 32.000 0.00 0.00 0.00 3.91
3203 4265 7.086376 AGTAATTCATTTGCTAGTTGTGCTTG 58.914 34.615 0.00 0.00 0.00 4.01
3204 4266 3.921119 TCATTTGCTAGTTGTGCTTGG 57.079 42.857 0.00 0.00 0.00 3.61
3205 4267 2.030007 TCATTTGCTAGTTGTGCTTGGC 60.030 45.455 0.00 0.00 0.00 4.52
3206 4268 1.397672 TTTGCTAGTTGTGCTTGGCA 58.602 45.000 0.00 0.00 35.60 4.92
3215 4277 4.155950 TGCTTGGCACGACATTGT 57.844 50.000 0.00 0.00 31.71 2.71
3216 4278 3.314083 TGCTTGGCACGACATTGTA 57.686 47.368 0.00 0.00 31.71 2.41
3217 4279 1.155889 TGCTTGGCACGACATTGTAG 58.844 50.000 0.00 0.00 31.71 2.74
3218 4280 1.156736 GCTTGGCACGACATTGTAGT 58.843 50.000 0.00 0.00 0.00 2.73
3219 4281 2.289133 TGCTTGGCACGACATTGTAGTA 60.289 45.455 2.07 0.00 31.71 1.82
3220 4282 2.348666 GCTTGGCACGACATTGTAGTAG 59.651 50.000 2.07 0.00 0.00 2.57
3221 4283 3.845178 CTTGGCACGACATTGTAGTAGA 58.155 45.455 2.07 0.00 0.00 2.59
3222 4284 3.945981 TGGCACGACATTGTAGTAGAA 57.054 42.857 2.07 0.00 0.00 2.10
3223 4285 3.581755 TGGCACGACATTGTAGTAGAAC 58.418 45.455 2.07 0.00 0.00 3.01
3224 4286 3.006003 TGGCACGACATTGTAGTAGAACA 59.994 43.478 2.07 0.00 0.00 3.18
3225 4287 3.991773 GGCACGACATTGTAGTAGAACAA 59.008 43.478 2.07 0.00 43.16 2.83
3226 4288 4.449743 GGCACGACATTGTAGTAGAACAAA 59.550 41.667 2.07 0.00 42.33 2.83
3227 4289 5.389516 GGCACGACATTGTAGTAGAACAAAG 60.390 44.000 2.07 0.00 42.33 2.77
3228 4290 5.404366 GCACGACATTGTAGTAGAACAAAGA 59.596 40.000 2.07 0.00 42.33 2.52
3229 4291 6.400091 GCACGACATTGTAGTAGAACAAAGAG 60.400 42.308 2.07 0.00 42.33 2.85
3230 4292 6.089551 CACGACATTGTAGTAGAACAAAGAGG 59.910 42.308 2.07 0.00 42.33 3.69
3231 4293 5.577164 CGACATTGTAGTAGAACAAAGAGGG 59.423 44.000 0.00 0.00 42.33 4.30
3232 4294 5.246307 ACATTGTAGTAGAACAAAGAGGGC 58.754 41.667 0.00 0.00 42.33 5.19
3233 4295 4.967084 TTGTAGTAGAACAAAGAGGGCA 57.033 40.909 0.00 0.00 36.45 5.36
3234 4296 4.967084 TGTAGTAGAACAAAGAGGGCAA 57.033 40.909 0.00 0.00 0.00 4.52
3235 4297 4.894784 TGTAGTAGAACAAAGAGGGCAAG 58.105 43.478 0.00 0.00 0.00 4.01
3236 4298 3.425162 AGTAGAACAAAGAGGGCAAGG 57.575 47.619 0.00 0.00 0.00 3.61
3237 4299 2.040412 AGTAGAACAAAGAGGGCAAGGG 59.960 50.000 0.00 0.00 0.00 3.95
3238 4300 1.149101 AGAACAAAGAGGGCAAGGGA 58.851 50.000 0.00 0.00 0.00 4.20
3239 4301 1.202940 AGAACAAAGAGGGCAAGGGAC 60.203 52.381 0.00 0.00 0.00 4.46
3240 4302 0.555769 AACAAAGAGGGCAAGGGACA 59.444 50.000 0.00 0.00 0.00 4.02
3241 4303 0.555769 ACAAAGAGGGCAAGGGACAA 59.444 50.000 0.00 0.00 0.00 3.18
3242 4304 1.147817 ACAAAGAGGGCAAGGGACAAT 59.852 47.619 0.00 0.00 0.00 2.71
3243 4305 1.547372 CAAAGAGGGCAAGGGACAATG 59.453 52.381 0.00 0.00 0.00 2.82
3244 4306 0.779997 AAGAGGGCAAGGGACAATGT 59.220 50.000 0.00 0.00 0.00 2.71
3245 4307 0.779997 AGAGGGCAAGGGACAATGTT 59.220 50.000 0.00 0.00 0.00 2.71
3246 4308 0.890683 GAGGGCAAGGGACAATGTTG 59.109 55.000 0.00 0.00 0.00 3.33
3247 4309 0.482446 AGGGCAAGGGACAATGTTGA 59.518 50.000 0.00 0.00 0.00 3.18
3248 4310 0.890683 GGGCAAGGGACAATGTTGAG 59.109 55.000 0.00 0.00 0.00 3.02
3249 4311 1.620822 GGCAAGGGACAATGTTGAGT 58.379 50.000 0.00 0.00 0.00 3.41
3250 4312 1.270550 GGCAAGGGACAATGTTGAGTG 59.729 52.381 0.00 0.00 0.00 3.51
3251 4313 1.336240 GCAAGGGACAATGTTGAGTGC 60.336 52.381 0.00 0.00 0.00 4.40
3252 4314 1.270550 CAAGGGACAATGTTGAGTGCC 59.729 52.381 0.00 0.00 45.46 5.01
3253 4315 3.346426 GGGACAATGTTGAGTGCCT 57.654 52.632 0.00 0.00 42.29 4.75
3254 4316 0.883833 GGGACAATGTTGAGTGCCTG 59.116 55.000 0.00 0.00 42.29 4.85
3255 4317 1.545428 GGGACAATGTTGAGTGCCTGA 60.545 52.381 0.00 0.00 42.29 3.86
3256 4318 2.229792 GGACAATGTTGAGTGCCTGAA 58.770 47.619 0.00 0.00 0.00 3.02
3257 4319 2.622942 GGACAATGTTGAGTGCCTGAAA 59.377 45.455 0.00 0.00 0.00 2.69
3258 4320 3.304928 GGACAATGTTGAGTGCCTGAAAG 60.305 47.826 0.00 0.00 0.00 2.62
3259 4321 3.554934 ACAATGTTGAGTGCCTGAAAGA 58.445 40.909 0.00 0.00 34.07 2.52
3260 4322 3.953612 ACAATGTTGAGTGCCTGAAAGAA 59.046 39.130 0.00 0.00 34.07 2.52
3261 4323 4.402155 ACAATGTTGAGTGCCTGAAAGAAA 59.598 37.500 0.00 0.00 34.07 2.52
3262 4324 5.069516 ACAATGTTGAGTGCCTGAAAGAAAT 59.930 36.000 0.00 0.00 34.07 2.17
3263 4325 4.836125 TGTTGAGTGCCTGAAAGAAATC 57.164 40.909 0.00 0.00 34.07 2.17
3264 4326 3.569701 TGTTGAGTGCCTGAAAGAAATCC 59.430 43.478 0.00 0.00 34.07 3.01
3265 4327 3.795688 TGAGTGCCTGAAAGAAATCCT 57.204 42.857 0.00 0.00 34.07 3.24
3266 4328 4.104383 TGAGTGCCTGAAAGAAATCCTT 57.896 40.909 0.00 0.00 34.07 3.36
3267 4329 3.822735 TGAGTGCCTGAAAGAAATCCTTG 59.177 43.478 0.00 0.00 34.07 3.61
3268 4330 2.560105 AGTGCCTGAAAGAAATCCTTGC 59.440 45.455 0.00 0.00 34.07 4.01
3269 4331 2.297033 GTGCCTGAAAGAAATCCTTGCA 59.703 45.455 0.00 0.00 38.10 4.08
3270 4332 3.056322 GTGCCTGAAAGAAATCCTTGCAT 60.056 43.478 0.00 0.00 39.63 3.96
3271 4333 3.194116 TGCCTGAAAGAAATCCTTGCATC 59.806 43.478 0.00 0.00 39.63 3.91
3272 4334 3.194116 GCCTGAAAGAAATCCTTGCATCA 59.806 43.478 0.00 0.00 39.63 3.07
3273 4335 4.142004 GCCTGAAAGAAATCCTTGCATCAT 60.142 41.667 0.00 0.00 39.63 2.45
3274 4336 5.068198 GCCTGAAAGAAATCCTTGCATCATA 59.932 40.000 0.00 0.00 39.63 2.15
3275 4337 6.239232 GCCTGAAAGAAATCCTTGCATCATAT 60.239 38.462 0.00 0.00 39.63 1.78
3276 4338 7.686127 GCCTGAAAGAAATCCTTGCATCATATT 60.686 37.037 0.00 0.00 39.63 1.28
3277 4339 7.652105 CCTGAAAGAAATCCTTGCATCATATTG 59.348 37.037 0.00 0.00 39.63 1.90
3278 4340 8.070034 TGAAAGAAATCCTTGCATCATATTGT 57.930 30.769 0.00 0.00 35.50 2.71
3279 4341 7.977293 TGAAAGAAATCCTTGCATCATATTGTG 59.023 33.333 0.00 0.00 35.50 3.33
3280 4342 5.839621 AGAAATCCTTGCATCATATTGTGC 58.160 37.500 0.00 2.78 41.61 4.57
3281 4343 4.595762 AATCCTTGCATCATATTGTGCC 57.404 40.909 6.62 0.00 40.56 5.01
3282 4344 3.301794 TCCTTGCATCATATTGTGCCT 57.698 42.857 6.62 0.00 40.56 4.75
3283 4345 3.216800 TCCTTGCATCATATTGTGCCTC 58.783 45.455 6.62 0.00 40.56 4.70
3284 4346 3.117776 TCCTTGCATCATATTGTGCCTCT 60.118 43.478 6.62 0.00 40.56 3.69
3285 4347 3.635373 CCTTGCATCATATTGTGCCTCTT 59.365 43.478 6.62 0.00 40.56 2.85
3286 4348 4.261489 CCTTGCATCATATTGTGCCTCTTC 60.261 45.833 6.62 0.00 40.56 2.87
3287 4349 3.888583 TGCATCATATTGTGCCTCTTCA 58.111 40.909 6.62 0.00 40.56 3.02
3288 4350 3.881089 TGCATCATATTGTGCCTCTTCAG 59.119 43.478 6.62 0.00 40.56 3.02
3289 4351 4.132336 GCATCATATTGTGCCTCTTCAGA 58.868 43.478 0.00 0.00 35.35 3.27
3290 4352 4.577693 GCATCATATTGTGCCTCTTCAGAA 59.422 41.667 0.00 0.00 35.35 3.02
3291 4353 5.277876 GCATCATATTGTGCCTCTTCAGAAG 60.278 44.000 3.45 3.45 35.35 2.85
3292 4354 5.682234 TCATATTGTGCCTCTTCAGAAGA 57.318 39.130 12.50 12.50 35.87 2.87
3293 4355 6.244552 TCATATTGTGCCTCTTCAGAAGAT 57.755 37.500 13.49 0.00 36.82 2.40
3294 4356 6.656902 TCATATTGTGCCTCTTCAGAAGATT 58.343 36.000 13.49 0.00 36.82 2.40
3295 4357 7.795047 TCATATTGTGCCTCTTCAGAAGATTA 58.205 34.615 13.49 0.67 36.82 1.75
3296 4358 7.930325 TCATATTGTGCCTCTTCAGAAGATTAG 59.070 37.037 13.49 6.93 36.82 1.73
3297 4359 5.489792 TTGTGCCTCTTCAGAAGATTAGT 57.510 39.130 13.49 0.00 36.82 2.24
3298 4360 4.825422 TGTGCCTCTTCAGAAGATTAGTG 58.175 43.478 13.49 1.60 36.82 2.74
3299 4361 4.284490 TGTGCCTCTTCAGAAGATTAGTGT 59.716 41.667 13.49 0.00 36.82 3.55
3300 4362 4.629200 GTGCCTCTTCAGAAGATTAGTGTG 59.371 45.833 13.49 0.19 36.82 3.82
3301 4363 4.187694 GCCTCTTCAGAAGATTAGTGTGG 58.812 47.826 13.49 10.14 36.82 4.17
3302 4364 4.081420 GCCTCTTCAGAAGATTAGTGTGGA 60.081 45.833 13.49 0.00 36.82 4.02
3303 4365 5.415221 CCTCTTCAGAAGATTAGTGTGGAC 58.585 45.833 13.49 0.00 36.82 4.02
3304 4366 5.047021 CCTCTTCAGAAGATTAGTGTGGACA 60.047 44.000 13.49 0.00 36.82 4.02
3305 4367 6.419484 TCTTCAGAAGATTAGTGTGGACAA 57.581 37.500 8.95 0.00 31.20 3.18
3306 4368 6.459066 TCTTCAGAAGATTAGTGTGGACAAG 58.541 40.000 8.95 0.00 31.20 3.16
3307 4369 5.808366 TCAGAAGATTAGTGTGGACAAGT 57.192 39.130 0.00 0.00 0.00 3.16
3308 4370 6.174720 TCAGAAGATTAGTGTGGACAAGTT 57.825 37.500 0.00 0.00 0.00 2.66
3309 4371 7.297936 TCAGAAGATTAGTGTGGACAAGTTA 57.702 36.000 0.00 0.00 0.00 2.24
3310 4372 7.732025 TCAGAAGATTAGTGTGGACAAGTTAA 58.268 34.615 0.00 0.00 0.00 2.01
3311 4373 7.872993 TCAGAAGATTAGTGTGGACAAGTTAAG 59.127 37.037 0.00 0.00 0.00 1.85
3312 4374 7.657761 CAGAAGATTAGTGTGGACAAGTTAAGT 59.342 37.037 0.00 0.00 0.00 2.24
3313 4375 7.657761 AGAAGATTAGTGTGGACAAGTTAAGTG 59.342 37.037 0.00 0.00 0.00 3.16
3314 4376 5.701290 AGATTAGTGTGGACAAGTTAAGTGC 59.299 40.000 0.00 0.00 0.00 4.40
3315 4377 2.210116 AGTGTGGACAAGTTAAGTGCG 58.790 47.619 0.00 0.00 0.00 5.34
3316 4378 1.937899 GTGTGGACAAGTTAAGTGCGT 59.062 47.619 0.00 0.00 0.00 5.24
3317 4379 2.353579 GTGTGGACAAGTTAAGTGCGTT 59.646 45.455 0.00 0.00 0.00 4.84
3318 4380 3.011119 TGTGGACAAGTTAAGTGCGTTT 58.989 40.909 0.00 0.00 0.00 3.60
3319 4381 3.440872 TGTGGACAAGTTAAGTGCGTTTT 59.559 39.130 0.00 0.00 0.00 2.43
3320 4382 4.082679 TGTGGACAAGTTAAGTGCGTTTTT 60.083 37.500 0.00 0.00 0.00 1.94
3343 4405 8.834004 TTTTAGCCCTAATACTAGAGTTGAGA 57.166 34.615 0.00 0.00 0.00 3.27
3344 4406 9.435570 TTTTAGCCCTAATACTAGAGTTGAGAT 57.564 33.333 0.00 0.00 0.00 2.75
3345 4407 6.909550 AGCCCTAATACTAGAGTTGAGATG 57.090 41.667 0.00 0.00 0.00 2.90
3346 4408 6.615617 AGCCCTAATACTAGAGTTGAGATGA 58.384 40.000 0.00 0.00 0.00 2.92
3347 4409 7.069986 AGCCCTAATACTAGAGTTGAGATGAA 58.930 38.462 0.00 0.00 0.00 2.57
3348 4410 7.232534 AGCCCTAATACTAGAGTTGAGATGAAG 59.767 40.741 0.00 0.00 0.00 3.02
3349 4411 7.231722 GCCCTAATACTAGAGTTGAGATGAAGA 59.768 40.741 0.00 0.00 0.00 2.87
3350 4412 9.137459 CCCTAATACTAGAGTTGAGATGAAGAA 57.863 37.037 0.00 0.00 0.00 2.52
3357 4419 9.566432 ACTAGAGTTGAGATGAAGAAACAAATT 57.434 29.630 0.00 0.00 0.00 1.82
3360 4422 7.650903 AGAGTTGAGATGAAGAAACAAATTTGC 59.349 33.333 18.12 2.19 0.00 3.68
3361 4423 7.267128 AGTTGAGATGAAGAAACAAATTTGCA 58.733 30.769 18.12 7.19 0.00 4.08
3362 4424 7.437267 AGTTGAGATGAAGAAACAAATTTGCAG 59.563 33.333 18.12 0.00 0.00 4.41
3363 4425 5.693104 TGAGATGAAGAAACAAATTTGCAGC 59.307 36.000 18.12 9.36 0.00 5.25
3364 4426 5.603596 AGATGAAGAAACAAATTTGCAGCA 58.396 33.333 18.12 8.33 0.00 4.41
3365 4427 5.694910 AGATGAAGAAACAAATTTGCAGCAG 59.305 36.000 18.12 0.00 0.00 4.24
3366 4428 4.757594 TGAAGAAACAAATTTGCAGCAGT 58.242 34.783 18.12 0.00 0.00 4.40
3367 4429 5.177326 TGAAGAAACAAATTTGCAGCAGTT 58.823 33.333 18.12 4.67 0.00 3.16
3368 4430 5.642919 TGAAGAAACAAATTTGCAGCAGTTT 59.357 32.000 18.12 9.64 32.48 2.66
3369 4431 5.473796 AGAAACAAATTTGCAGCAGTTTG 57.526 34.783 23.48 23.48 37.52 2.93
3370 4432 5.177326 AGAAACAAATTTGCAGCAGTTTGA 58.823 33.333 28.34 1.47 35.93 2.69
3371 4433 5.642919 AGAAACAAATTTGCAGCAGTTTGAA 59.357 32.000 28.34 9.89 35.93 2.69
3372 4434 6.316890 AGAAACAAATTTGCAGCAGTTTGAAT 59.683 30.769 28.34 20.17 35.93 2.57
3373 4435 7.495279 AGAAACAAATTTGCAGCAGTTTGAATA 59.505 29.630 28.34 0.00 35.93 1.75
3374 4436 7.733402 AACAAATTTGCAGCAGTTTGAATAT 57.267 28.000 28.34 15.60 35.93 1.28
3375 4437 8.830201 AACAAATTTGCAGCAGTTTGAATATA 57.170 26.923 28.34 0.00 35.93 0.86
3376 4438 8.830201 ACAAATTTGCAGCAGTTTGAATATAA 57.170 26.923 28.34 6.77 35.93 0.98
3377 4439 9.439500 ACAAATTTGCAGCAGTTTGAATATAAT 57.561 25.926 28.34 8.51 35.93 1.28
3378 4440 9.697250 CAAATTTGCAGCAGTTTGAATATAATG 57.303 29.630 21.87 4.44 34.38 1.90
3379 4441 9.656040 AAATTTGCAGCAGTTTGAATATAATGA 57.344 25.926 6.96 0.00 0.00 2.57
3380 4442 8.638685 ATTTGCAGCAGTTTGAATATAATGAC 57.361 30.769 0.00 0.00 0.00 3.06
3381 4443 6.135290 TGCAGCAGTTTGAATATAATGACC 57.865 37.500 0.00 0.00 0.00 4.02
3382 4444 5.207768 GCAGCAGTTTGAATATAATGACCG 58.792 41.667 0.00 0.00 0.00 4.79
3383 4445 5.220854 GCAGCAGTTTGAATATAATGACCGT 60.221 40.000 0.00 0.00 0.00 4.83
3384 4446 6.194463 CAGCAGTTTGAATATAATGACCGTG 58.806 40.000 0.00 0.00 0.00 4.94
3385 4447 5.296780 AGCAGTTTGAATATAATGACCGTGG 59.703 40.000 0.00 0.00 0.00 4.94
3386 4448 5.510671 CAGTTTGAATATAATGACCGTGGC 58.489 41.667 0.00 0.00 0.00 5.01
3387 4449 5.065859 CAGTTTGAATATAATGACCGTGGCA 59.934 40.000 0.00 0.00 0.00 4.92
3388 4450 5.065988 AGTTTGAATATAATGACCGTGGCAC 59.934 40.000 7.79 7.79 0.00 5.01
3389 4451 4.415881 TGAATATAATGACCGTGGCACT 57.584 40.909 16.72 0.00 0.00 4.40
3390 4452 5.538849 TGAATATAATGACCGTGGCACTA 57.461 39.130 16.72 0.00 0.00 2.74
3391 4453 6.109156 TGAATATAATGACCGTGGCACTAT 57.891 37.500 16.72 7.95 0.00 2.12
3392 4454 6.530120 TGAATATAATGACCGTGGCACTATT 58.470 36.000 16.72 9.80 0.00 1.73
3393 4455 6.426633 TGAATATAATGACCGTGGCACTATTG 59.573 38.462 16.72 4.03 0.00 1.90
3394 4456 1.750193 AATGACCGTGGCACTATTGG 58.250 50.000 16.72 11.76 0.00 3.16
3395 4457 0.908910 ATGACCGTGGCACTATTGGA 59.091 50.000 16.72 0.00 0.00 3.53
3396 4458 0.908910 TGACCGTGGCACTATTGGAT 59.091 50.000 16.72 0.58 0.00 3.41
3397 4459 2.112190 TGACCGTGGCACTATTGGATA 58.888 47.619 16.72 1.68 0.00 2.59
3398 4460 2.703536 TGACCGTGGCACTATTGGATAT 59.296 45.455 16.72 0.00 0.00 1.63
3399 4461 3.135712 TGACCGTGGCACTATTGGATATT 59.864 43.478 16.72 0.00 0.00 1.28
3400 4462 4.134563 GACCGTGGCACTATTGGATATTT 58.865 43.478 16.72 0.00 0.00 1.40
3401 4463 5.163290 TGACCGTGGCACTATTGGATATTTA 60.163 40.000 16.72 0.00 0.00 1.40
3402 4464 5.876357 ACCGTGGCACTATTGGATATTTAT 58.124 37.500 16.72 0.00 0.00 1.40
3403 4465 5.938125 ACCGTGGCACTATTGGATATTTATC 59.062 40.000 16.72 0.00 0.00 1.75
3404 4466 6.173339 CCGTGGCACTATTGGATATTTATCT 58.827 40.000 16.72 0.00 33.28 1.98
3405 4467 7.038587 ACCGTGGCACTATTGGATATTTATCTA 60.039 37.037 16.72 0.00 33.28 1.98
3406 4468 7.492669 CCGTGGCACTATTGGATATTTATCTAG 59.507 40.741 16.72 0.00 33.28 2.43
3407 4469 8.251026 CGTGGCACTATTGGATATTTATCTAGA 58.749 37.037 16.72 0.00 33.28 2.43
3408 4470 9.372369 GTGGCACTATTGGATATTTATCTAGAC 57.628 37.037 11.13 0.00 33.28 2.59
3409 4471 9.326489 TGGCACTATTGGATATTTATCTAGACT 57.674 33.333 0.00 0.00 33.28 3.24
3424 4486 9.653287 TTTATCTAGACTTACCATTCACTGTTG 57.347 33.333 0.00 0.00 0.00 3.33
3425 4487 6.037786 TCTAGACTTACCATTCACTGTTGG 57.962 41.667 0.00 0.00 39.02 3.77
3427 4489 5.048846 AGACTTACCATTCACTGTTGGTT 57.951 39.130 7.87 0.00 43.73 3.67
3428 4490 5.445964 AGACTTACCATTCACTGTTGGTTT 58.554 37.500 7.87 0.00 43.73 3.27
3429 4491 6.597562 AGACTTACCATTCACTGTTGGTTTA 58.402 36.000 7.87 0.00 43.73 2.01
3430 4492 6.710744 AGACTTACCATTCACTGTTGGTTTAG 59.289 38.462 7.87 8.52 43.73 1.85
3431 4493 6.597562 ACTTACCATTCACTGTTGGTTTAGA 58.402 36.000 7.87 0.00 43.73 2.10
3432 4494 7.231467 ACTTACCATTCACTGTTGGTTTAGAT 58.769 34.615 7.87 0.00 43.73 1.98
3433 4495 8.380099 ACTTACCATTCACTGTTGGTTTAGATA 58.620 33.333 7.87 0.00 43.73 1.98
3434 4496 8.786826 TTACCATTCACTGTTGGTTTAGATAG 57.213 34.615 7.87 0.00 43.73 2.08
3435 4497 6.180472 ACCATTCACTGTTGGTTTAGATAGG 58.820 40.000 0.00 0.00 43.73 2.57
3436 4498 6.012858 ACCATTCACTGTTGGTTTAGATAGGA 60.013 38.462 0.00 0.00 43.73 2.94
3437 4499 6.316390 CCATTCACTGTTGGTTTAGATAGGAC 59.684 42.308 0.00 0.00 0.00 3.85
3438 4500 6.428083 TTCACTGTTGGTTTAGATAGGACA 57.572 37.500 0.00 0.00 0.00 4.02
3439 4501 5.790593 TCACTGTTGGTTTAGATAGGACAC 58.209 41.667 0.00 0.00 0.00 3.67
3440 4502 5.305902 TCACTGTTGGTTTAGATAGGACACA 59.694 40.000 0.00 0.00 0.00 3.72
3441 4503 5.408604 CACTGTTGGTTTAGATAGGACACAC 59.591 44.000 0.00 0.00 0.00 3.82
3442 4504 5.307196 ACTGTTGGTTTAGATAGGACACACT 59.693 40.000 0.00 0.00 0.00 3.55
3443 4505 5.547465 TGTTGGTTTAGATAGGACACACTG 58.453 41.667 0.00 0.00 0.00 3.66
3444 4506 5.071250 TGTTGGTTTAGATAGGACACACTGT 59.929 40.000 0.00 0.00 0.00 3.55
3445 4507 5.818678 TGGTTTAGATAGGACACACTGTT 57.181 39.130 0.00 0.00 0.00 3.16
3446 4508 6.182507 TGGTTTAGATAGGACACACTGTTT 57.817 37.500 0.00 0.00 0.00 2.83
3447 4509 6.228258 TGGTTTAGATAGGACACACTGTTTC 58.772 40.000 0.00 0.00 0.00 2.78
3448 4510 5.642491 GGTTTAGATAGGACACACTGTTTCC 59.358 44.000 6.28 6.28 33.03 3.13
3449 4511 6.228258 GTTTAGATAGGACACACTGTTTCCA 58.772 40.000 15.37 3.75 35.09 3.53
3450 4512 6.620877 TTAGATAGGACACACTGTTTCCAT 57.379 37.500 15.37 7.72 35.09 3.41
3451 4513 5.505181 AGATAGGACACACTGTTTCCATT 57.495 39.130 15.37 3.54 35.09 3.16
3452 4514 5.880901 AGATAGGACACACTGTTTCCATTT 58.119 37.500 15.37 1.34 35.09 2.32
3453 4515 6.306987 AGATAGGACACACTGTTTCCATTTT 58.693 36.000 15.37 0.00 35.09 1.82
3454 4516 6.777580 AGATAGGACACACTGTTTCCATTTTT 59.222 34.615 15.37 0.00 35.09 1.94
3476 4538 6.543430 TTTGGTGGATTGAAGAATTATGGG 57.457 37.500 0.00 0.00 0.00 4.00
3477 4539 5.464588 TGGTGGATTGAAGAATTATGGGA 57.535 39.130 0.00 0.00 0.00 4.37
3478 4540 6.029492 TGGTGGATTGAAGAATTATGGGAT 57.971 37.500 0.00 0.00 0.00 3.85
3479 4541 5.834742 TGGTGGATTGAAGAATTATGGGATG 59.165 40.000 0.00 0.00 0.00 3.51
3480 4542 6.070656 GGTGGATTGAAGAATTATGGGATGA 58.929 40.000 0.00 0.00 0.00 2.92
3481 4543 6.550854 GGTGGATTGAAGAATTATGGGATGAA 59.449 38.462 0.00 0.00 0.00 2.57
3482 4544 7.069826 GGTGGATTGAAGAATTATGGGATGAAA 59.930 37.037 0.00 0.00 0.00 2.69
3483 4545 8.139989 GTGGATTGAAGAATTATGGGATGAAAG 58.860 37.037 0.00 0.00 0.00 2.62
3484 4546 7.288389 TGGATTGAAGAATTATGGGATGAAAGG 59.712 37.037 0.00 0.00 0.00 3.11
3485 4547 7.256083 GGATTGAAGAATTATGGGATGAAAGGG 60.256 40.741 0.00 0.00 0.00 3.95
3486 4548 6.339999 TGAAGAATTATGGGATGAAAGGGA 57.660 37.500 0.00 0.00 0.00 4.20
3487 4549 6.740693 TGAAGAATTATGGGATGAAAGGGAA 58.259 36.000 0.00 0.00 0.00 3.97
3488 4550 6.835488 TGAAGAATTATGGGATGAAAGGGAAG 59.165 38.462 0.00 0.00 0.00 3.46
3489 4551 6.596869 AGAATTATGGGATGAAAGGGAAGA 57.403 37.500 0.00 0.00 0.00 2.87
3490 4552 6.368805 AGAATTATGGGATGAAAGGGAAGAC 58.631 40.000 0.00 0.00 0.00 3.01
3491 4553 5.732331 ATTATGGGATGAAAGGGAAGACA 57.268 39.130 0.00 0.00 0.00 3.41
3492 4554 5.528600 TTATGGGATGAAAGGGAAGACAA 57.471 39.130 0.00 0.00 0.00 3.18
3493 4555 3.154827 TGGGATGAAAGGGAAGACAAC 57.845 47.619 0.00 0.00 0.00 3.32
3494 4556 2.716424 TGGGATGAAAGGGAAGACAACT 59.284 45.455 0.00 0.00 0.00 3.16
3495 4557 3.140144 TGGGATGAAAGGGAAGACAACTT 59.860 43.478 0.00 0.00 39.24 2.66
3496 4558 4.152647 GGGATGAAAGGGAAGACAACTTT 58.847 43.478 0.00 0.00 36.39 2.66
3497 4559 4.218635 GGGATGAAAGGGAAGACAACTTTC 59.781 45.833 8.89 8.89 46.27 2.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 6.500684 AAGTAGTAATGTTCAACCATGCAG 57.499 37.500 0.00 0.00 0.00 4.41
72 73 4.800993 CACTTCAGCTTACATTACTCCTCG 59.199 45.833 0.00 0.00 0.00 4.63
88 89 5.122869 CCATGTCCACTATGTTTCACTTCAG 59.877 44.000 0.00 0.00 0.00 3.02
114 115 1.123928 ATCTCTCGGCTACCTTTGGG 58.876 55.000 0.00 0.00 38.88 4.12
115 116 1.482593 ACATCTCTCGGCTACCTTTGG 59.517 52.381 0.00 0.00 0.00 3.28
118 124 2.028130 CTGACATCTCTCGGCTACCTT 58.972 52.381 0.00 0.00 0.00 3.50
121 127 0.671251 CCCTGACATCTCTCGGCTAC 59.329 60.000 0.00 0.00 0.00 3.58
123 129 1.760086 CCCCTGACATCTCTCGGCT 60.760 63.158 0.00 0.00 0.00 5.52
126 132 1.407936 ATCACCCCTGACATCTCTCG 58.592 55.000 0.00 0.00 0.00 4.04
146 153 0.040692 CTGTCGTCGTCGGACTCAAA 60.041 55.000 6.57 0.00 41.16 2.69
152 159 0.109458 CCATTTCTGTCGTCGTCGGA 60.109 55.000 1.55 0.00 37.69 4.55
156 163 0.250124 TTGGCCATTTCTGTCGTCGT 60.250 50.000 6.09 0.00 0.00 4.34
163 170 0.107557 GCCCCATTTGGCCATTTCTG 60.108 55.000 6.09 1.47 46.11 3.02
182 189 1.098869 TTCTCGCTAGTGCTCAGGAG 58.901 55.000 0.00 0.00 36.97 3.69
246 261 3.146066 TCTCAAGTTGGAAATGGAACCG 58.854 45.455 2.34 0.00 0.00 4.44
282 297 4.447389 TGAACATATGAATCGCGTACATGG 59.553 41.667 10.38 14.81 0.00 3.66
299 314 7.729124 AAGGGAAGATCAAATGAATGAACAT 57.271 32.000 0.00 0.00 32.06 2.71
317 332 4.425772 TCTGAGTGAGTGGAATAAGGGAA 58.574 43.478 0.00 0.00 0.00 3.97
319 334 5.104776 TGAATCTGAGTGAGTGGAATAAGGG 60.105 44.000 0.00 0.00 0.00 3.95
365 381 7.286546 TCACTAAATTTCTCAACCCATCAAACA 59.713 33.333 0.00 0.00 0.00 2.83
502 518 2.551006 GCACGTGTGTTGCCATGGA 61.551 57.895 18.40 0.00 0.00 3.41
513 529 5.640189 AGTAACTAGTAGAATGCACGTGT 57.360 39.130 18.38 0.00 0.00 4.49
543 710 6.645415 CGGGTTTCTATATGACAATCCTACAC 59.355 42.308 0.00 0.00 0.00 2.90
560 727 5.346181 TGGAAAACATTTTTCGGGTTTCT 57.654 34.783 0.00 0.00 33.91 2.52
568 735 2.731451 GAGCGGCTGGAAAACATTTTTC 59.269 45.455 7.50 3.25 0.00 2.29
794 1142 3.835478 TTTGGTGGAATTGATACCCCA 57.165 42.857 0.00 0.00 33.51 4.96
815 1163 2.364970 GCAGATGTAGGAGCATGAGACT 59.635 50.000 0.00 0.00 0.00 3.24
823 1171 1.602311 CCCATTGCAGATGTAGGAGC 58.398 55.000 7.71 0.00 0.00 4.70
824 1172 1.602311 GCCCATTGCAGATGTAGGAG 58.398 55.000 7.71 0.00 40.77 3.69
904 1436 4.709250 GAGGGTTTGGAGATGGTTCTATC 58.291 47.826 0.00 0.00 30.30 2.08
973 1506 3.357079 CCTGCTTTGCTTCGCGGT 61.357 61.111 6.13 0.00 0.00 5.68
1221 1754 6.515696 CGATCTATACCTGCTTGTTGATCTCA 60.516 42.308 0.00 0.00 0.00 3.27
1294 1832 4.691359 AGTACCCCAGGGACGCGT 62.691 66.667 13.85 13.85 38.96 6.01
1295 1833 3.387947 AAGTACCCCAGGGACGCG 61.388 66.667 7.25 3.53 38.96 6.01
1322 1860 0.248498 ATACCACGACTGCGACATCG 60.248 55.000 0.00 0.00 43.97 3.84
1327 1865 1.019673 GGAGTATACCACGACTGCGA 58.980 55.000 0.00 0.00 41.64 5.10
1331 1869 3.773119 ACAAATGGGAGTATACCACGACT 59.227 43.478 0.00 0.00 41.58 4.18
1339 1877 7.831690 TGCACAAATTCTACAAATGGGAGTATA 59.168 33.333 0.00 0.00 0.00 1.47
1341 1879 6.007076 TGCACAAATTCTACAAATGGGAGTA 58.993 36.000 0.00 0.00 0.00 2.59
1425 2149 2.932614 GCAGATCTACGCATGTCAAACT 59.067 45.455 0.00 0.00 0.00 2.66
1462 2186 3.251729 CGCCATTAAATGCTCTGTATGCT 59.748 43.478 0.00 0.00 0.00 3.79
1473 2197 3.253188 CCCCACACTATCGCCATTAAATG 59.747 47.826 0.00 0.00 0.00 2.32
1522 2246 8.764287 TCAGAGCATATAAAACATGATAACGTG 58.236 33.333 0.00 0.00 38.80 4.49
1582 2314 8.748412 CATTTGGACCCATACTGATAAAGAAAA 58.252 33.333 0.00 0.00 0.00 2.29
1586 2318 6.129179 ACCATTTGGACCCATACTGATAAAG 58.871 40.000 3.01 0.00 38.94 1.85
1587 2319 6.086011 ACCATTTGGACCCATACTGATAAA 57.914 37.500 3.01 0.00 38.94 1.40
1601 2333 3.071023 CCTCGCCTTATCTACCATTTGGA 59.929 47.826 3.01 0.00 38.94 3.53
1602 2334 3.071023 TCCTCGCCTTATCTACCATTTGG 59.929 47.826 0.00 0.00 42.17 3.28
1645 2379 5.228579 TGATGTGTACAACAAACACTGTG 57.771 39.130 6.19 6.19 45.95 3.66
1646 2380 5.356751 ACATGATGTGTACAACAAACACTGT 59.643 36.000 0.00 7.33 45.95 3.55
1843 2592 3.955471 TGTTGGCAGAAATCCTAGGAAG 58.045 45.455 17.30 4.95 0.00 3.46
1844 2593 4.380843 TTGTTGGCAGAAATCCTAGGAA 57.619 40.909 17.30 0.00 0.00 3.36
1845 2594 4.042809 TCTTTGTTGGCAGAAATCCTAGGA 59.957 41.667 15.46 15.46 0.00 2.94
1901 2655 9.377312 ACTTCAGAAAAGAGATAAAGTGATAGC 57.623 33.333 0.00 0.00 0.00 2.97
1905 2659 8.589338 AGCTACTTCAGAAAAGAGATAAAGTGA 58.411 33.333 0.00 0.00 0.00 3.41
1964 2718 7.772757 TCAAAGAAAACAAAGGGCAAAACATAT 59.227 29.630 0.00 0.00 0.00 1.78
2036 2790 6.238484 GCAAAGTGTTCTAGCCTATTACCATG 60.238 42.308 0.00 0.00 0.00 3.66
2037 2791 5.823045 GCAAAGTGTTCTAGCCTATTACCAT 59.177 40.000 0.00 0.00 0.00 3.55
2055 2809 6.810182 GCACTATTGATTTCAAGATGCAAAGT 59.190 34.615 15.67 0.00 39.57 2.66
2056 2810 7.033791 AGCACTATTGATTTCAAGATGCAAAG 58.966 34.615 19.69 0.80 40.93 2.77
2101 2856 5.355071 TGCACAGAAGCATAAGGATAAGTTG 59.645 40.000 0.00 0.00 40.11 3.16
2102 2857 5.500234 TGCACAGAAGCATAAGGATAAGTT 58.500 37.500 0.00 0.00 40.11 2.66
2112 2867 3.673902 TGTAAAGCTGCACAGAAGCATA 58.326 40.909 1.02 0.00 44.68 3.14
2119 2874 8.377681 CAATAAATGAAATGTAAAGCTGCACAG 58.622 33.333 1.02 0.00 0.00 3.66
2123 2878 8.243289 ACACAATAAATGAAATGTAAAGCTGC 57.757 30.769 0.00 0.00 0.00 5.25
2131 2886 9.295825 TCCACTAGAACACAATAAATGAAATGT 57.704 29.630 0.00 0.00 0.00 2.71
2228 3009 2.288763 CCAACCTGGGCAATGTAAACAC 60.289 50.000 0.00 0.00 32.67 3.32
2451 3505 1.191535 CGTAGGGAATGGGAGTGACA 58.808 55.000 0.00 0.00 0.00 3.58
2575 3629 1.132817 AGACCCAACCCAGACTACAGT 60.133 52.381 0.00 0.00 0.00 3.55
2577 3631 2.112279 AAGACCCAACCCAGACTACA 57.888 50.000 0.00 0.00 0.00 2.74
2683 3737 9.021863 GTAACTATATAGTTCAACAGAGCACAC 57.978 37.037 27.40 13.97 44.77 3.82
2863 3925 0.107214 CAATCCCCGAAGCTAAGGCA 60.107 55.000 2.04 0.00 41.70 4.75
2874 3936 1.755179 ACAATGAGAAGCAATCCCCG 58.245 50.000 0.00 0.00 0.00 5.73
2920 3982 1.093159 GCTCCTCTCAGTTGCCAATG 58.907 55.000 0.00 0.00 0.00 2.82
2982 4044 6.599244 TGAAATGAATATGTGAAGTGAGGGAC 59.401 38.462 0.00 0.00 0.00 4.46
2986 4048 8.260270 TCTGTGAAATGAATATGTGAAGTGAG 57.740 34.615 0.00 0.00 0.00 3.51
2987 4049 8.620116 TTCTGTGAAATGAATATGTGAAGTGA 57.380 30.769 0.00 0.00 0.00 3.41
2988 4050 8.509690 ACTTCTGTGAAATGAATATGTGAAGTG 58.490 33.333 0.00 0.00 38.88 3.16
2989 4051 8.627208 ACTTCTGTGAAATGAATATGTGAAGT 57.373 30.769 0.00 0.00 36.58 3.01
2990 4052 7.901889 CGACTTCTGTGAAATGAATATGTGAAG 59.098 37.037 0.00 0.00 34.97 3.02
2991 4053 7.148423 CCGACTTCTGTGAAATGAATATGTGAA 60.148 37.037 0.00 0.00 0.00 3.18
2993 4055 6.481134 CCGACTTCTGTGAAATGAATATGTG 58.519 40.000 0.00 0.00 0.00 3.21
2994 4056 5.065218 GCCGACTTCTGTGAAATGAATATGT 59.935 40.000 0.00 0.00 0.00 2.29
2995 4057 5.065090 TGCCGACTTCTGTGAAATGAATATG 59.935 40.000 0.00 0.00 0.00 1.78
2996 4058 5.185454 TGCCGACTTCTGTGAAATGAATAT 58.815 37.500 0.00 0.00 0.00 1.28
2997 4059 4.574892 TGCCGACTTCTGTGAAATGAATA 58.425 39.130 0.00 0.00 0.00 1.75
2998 4060 3.411446 TGCCGACTTCTGTGAAATGAAT 58.589 40.909 0.00 0.00 0.00 2.57
3000 4062 2.542020 TGCCGACTTCTGTGAAATGA 57.458 45.000 0.00 0.00 0.00 2.57
3003 4065 3.689161 CCAATATGCCGACTTCTGTGAAA 59.311 43.478 0.00 0.00 0.00 2.69
3004 4066 3.055458 TCCAATATGCCGACTTCTGTGAA 60.055 43.478 0.00 0.00 0.00 3.18
3005 4067 2.499693 TCCAATATGCCGACTTCTGTGA 59.500 45.455 0.00 0.00 0.00 3.58
3006 4068 2.905075 TCCAATATGCCGACTTCTGTG 58.095 47.619 0.00 0.00 0.00 3.66
3007 4069 3.055094 AGTTCCAATATGCCGACTTCTGT 60.055 43.478 0.00 0.00 0.00 3.41
3008 4070 3.535561 AGTTCCAATATGCCGACTTCTG 58.464 45.455 0.00 0.00 0.00 3.02
3009 4071 3.914426 AGTTCCAATATGCCGACTTCT 57.086 42.857 0.00 0.00 0.00 2.85
3010 4072 4.192317 AGAAGTTCCAATATGCCGACTTC 58.808 43.478 0.00 11.44 41.84 3.01
3011 4073 4.222124 AGAAGTTCCAATATGCCGACTT 57.778 40.909 0.00 0.00 0.00 3.01
3012 4074 3.914426 AGAAGTTCCAATATGCCGACT 57.086 42.857 0.00 0.00 0.00 4.18
3021 4083 8.809066 TCATCATTTCATGAAAGAAGTTCCAAT 58.191 29.630 24.17 2.71 43.50 3.16
3040 4102 6.069673 TGGTGGGTAGTCAACTAATCATCATT 60.070 38.462 0.00 0.00 0.00 2.57
3048 4110 3.968649 TCAAGTGGTGGGTAGTCAACTAA 59.031 43.478 0.00 0.00 0.00 2.24
3067 4129 2.942804 TGCTGTCACTTGGGAATTCAA 58.057 42.857 7.93 0.00 0.00 2.69
3072 4134 4.440880 CAAAAATTGCTGTCACTTGGGAA 58.559 39.130 0.00 0.00 0.00 3.97
3073 4135 4.057406 CAAAAATTGCTGTCACTTGGGA 57.943 40.909 0.00 0.00 0.00 4.37
3086 4148 5.972018 TGACAACATAAAGCGCAAAAATTG 58.028 33.333 11.47 9.40 0.00 2.32
3087 4149 6.257630 ACTTGACAACATAAAGCGCAAAAATT 59.742 30.769 11.47 0.00 0.00 1.82
3088 4150 5.752955 ACTTGACAACATAAAGCGCAAAAAT 59.247 32.000 11.47 0.00 0.00 1.82
3089 4151 5.105752 ACTTGACAACATAAAGCGCAAAAA 58.894 33.333 11.47 0.00 0.00 1.94
3090 4152 4.677584 ACTTGACAACATAAAGCGCAAAA 58.322 34.783 11.47 0.00 0.00 2.44
3091 4153 4.300189 ACTTGACAACATAAAGCGCAAA 57.700 36.364 11.47 0.00 0.00 3.68
3092 4154 3.980646 ACTTGACAACATAAAGCGCAA 57.019 38.095 11.47 0.00 0.00 4.85
3093 4155 4.062293 AGTACTTGACAACATAAAGCGCA 58.938 39.130 11.47 0.00 0.00 6.09
3094 4156 4.435651 GGAGTACTTGACAACATAAAGCGC 60.436 45.833 0.00 0.00 0.00 5.92
3095 4157 4.092968 GGGAGTACTTGACAACATAAAGCG 59.907 45.833 0.00 0.00 0.00 4.68
3096 4158 5.001232 TGGGAGTACTTGACAACATAAAGC 58.999 41.667 0.00 0.00 0.00 3.51
3097 4159 6.347402 CGTTGGGAGTACTTGACAACATAAAG 60.347 42.308 24.85 12.93 40.92 1.85
3098 4160 5.467399 CGTTGGGAGTACTTGACAACATAAA 59.533 40.000 24.85 1.00 40.92 1.40
3099 4161 4.992319 CGTTGGGAGTACTTGACAACATAA 59.008 41.667 24.85 2.07 40.92 1.90
3100 4162 4.039488 ACGTTGGGAGTACTTGACAACATA 59.961 41.667 24.85 1.79 40.92 2.29
3101 4163 3.181458 ACGTTGGGAGTACTTGACAACAT 60.181 43.478 24.85 15.25 40.92 2.71
3102 4164 2.168936 ACGTTGGGAGTACTTGACAACA 59.831 45.455 24.85 7.93 40.92 3.33
3103 4165 2.830104 ACGTTGGGAGTACTTGACAAC 58.170 47.619 19.77 19.77 38.36 3.32
3104 4166 3.133362 AGAACGTTGGGAGTACTTGACAA 59.867 43.478 5.00 0.15 0.00 3.18
3105 4167 2.696707 AGAACGTTGGGAGTACTTGACA 59.303 45.455 5.00 0.00 0.00 3.58
3106 4168 3.382048 AGAACGTTGGGAGTACTTGAC 57.618 47.619 5.00 0.00 0.00 3.18
3107 4169 4.401022 TCTAGAACGTTGGGAGTACTTGA 58.599 43.478 5.00 0.00 0.00 3.02
3108 4170 4.778534 TCTAGAACGTTGGGAGTACTTG 57.221 45.455 5.00 0.00 0.00 3.16
3109 4171 5.997384 AATCTAGAACGTTGGGAGTACTT 57.003 39.130 5.00 0.00 0.00 2.24
3110 4172 5.997384 AAATCTAGAACGTTGGGAGTACT 57.003 39.130 5.00 0.00 0.00 2.73
3111 4173 6.922407 GGATAAATCTAGAACGTTGGGAGTAC 59.078 42.308 5.00 0.00 0.00 2.73
3112 4174 6.238842 CGGATAAATCTAGAACGTTGGGAGTA 60.239 42.308 5.00 0.00 0.00 2.59
3113 4175 5.451520 CGGATAAATCTAGAACGTTGGGAGT 60.452 44.000 5.00 0.00 0.00 3.85
3114 4176 4.982916 CGGATAAATCTAGAACGTTGGGAG 59.017 45.833 5.00 0.00 0.00 4.30
3115 4177 4.403432 ACGGATAAATCTAGAACGTTGGGA 59.597 41.667 5.00 0.81 0.00 4.37
3116 4178 4.690122 ACGGATAAATCTAGAACGTTGGG 58.310 43.478 5.00 0.00 0.00 4.12
3117 4179 7.368833 AGATACGGATAAATCTAGAACGTTGG 58.631 38.462 5.00 0.00 34.69 3.77
3132 4194 9.788889 TGTCTTAGATTTGTCTAGATACGGATA 57.211 33.333 0.00 0.00 0.00 2.59
3133 4195 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
3134 4196 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
3135 4197 8.622157 TCTTGTCTTAGATTTGTCTAGATACGG 58.378 37.037 0.00 0.00 0.00 4.02
3143 4205 9.495572 CCTAAAGTTCTTGTCTTAGATTTGTCT 57.504 33.333 0.00 0.00 0.00 3.41
3144 4206 9.490379 TCCTAAAGTTCTTGTCTTAGATTTGTC 57.510 33.333 0.00 0.00 0.00 3.18
3145 4207 9.274206 GTCCTAAAGTTCTTGTCTTAGATTTGT 57.726 33.333 0.00 0.00 0.00 2.83
3146 4208 8.436200 CGTCCTAAAGTTCTTGTCTTAGATTTG 58.564 37.037 0.00 0.00 0.00 2.32
3147 4209 7.603024 CCGTCCTAAAGTTCTTGTCTTAGATTT 59.397 37.037 0.00 0.00 0.00 2.17
3148 4210 7.039223 TCCGTCCTAAAGTTCTTGTCTTAGATT 60.039 37.037 0.00 0.00 0.00 2.40
3149 4211 6.436532 TCCGTCCTAAAGTTCTTGTCTTAGAT 59.563 38.462 0.00 0.00 0.00 1.98
3150 4212 5.771666 TCCGTCCTAAAGTTCTTGTCTTAGA 59.228 40.000 0.00 0.00 0.00 2.10
3151 4213 6.022163 TCCGTCCTAAAGTTCTTGTCTTAG 57.978 41.667 0.00 0.00 0.00 2.18
3152 4214 6.409524 TTCCGTCCTAAAGTTCTTGTCTTA 57.590 37.500 0.00 0.00 0.00 2.10
3153 4215 4.950205 TCCGTCCTAAAGTTCTTGTCTT 57.050 40.909 0.00 0.00 0.00 3.01
3154 4216 4.262506 CCTTCCGTCCTAAAGTTCTTGTCT 60.263 45.833 0.00 0.00 0.00 3.41
3155 4217 3.995048 CCTTCCGTCCTAAAGTTCTTGTC 59.005 47.826 0.00 0.00 0.00 3.18
3156 4218 3.644738 TCCTTCCGTCCTAAAGTTCTTGT 59.355 43.478 0.00 0.00 0.00 3.16
3157 4219 4.246458 CTCCTTCCGTCCTAAAGTTCTTG 58.754 47.826 0.00 0.00 0.00 3.02
3158 4220 3.902467 ACTCCTTCCGTCCTAAAGTTCTT 59.098 43.478 0.00 0.00 0.00 2.52
3159 4221 3.508426 ACTCCTTCCGTCCTAAAGTTCT 58.492 45.455 0.00 0.00 0.00 3.01
3160 4222 3.957591 ACTCCTTCCGTCCTAAAGTTC 57.042 47.619 0.00 0.00 0.00 3.01
3161 4223 6.013984 TGAATTACTCCTTCCGTCCTAAAGTT 60.014 38.462 0.00 0.00 0.00 2.66
3162 4224 5.482878 TGAATTACTCCTTCCGTCCTAAAGT 59.517 40.000 0.00 0.00 0.00 2.66
3163 4225 5.974108 TGAATTACTCCTTCCGTCCTAAAG 58.026 41.667 0.00 0.00 0.00 1.85
3164 4226 6.555463 ATGAATTACTCCTTCCGTCCTAAA 57.445 37.500 0.00 0.00 0.00 1.85
3165 4227 6.555463 AATGAATTACTCCTTCCGTCCTAA 57.445 37.500 0.00 0.00 0.00 2.69
3166 4228 6.346096 CAAATGAATTACTCCTTCCGTCCTA 58.654 40.000 0.00 0.00 0.00 2.94
3167 4229 5.186198 CAAATGAATTACTCCTTCCGTCCT 58.814 41.667 0.00 0.00 0.00 3.85
3168 4230 4.201920 GCAAATGAATTACTCCTTCCGTCC 60.202 45.833 0.00 0.00 0.00 4.79
3169 4231 4.636206 AGCAAATGAATTACTCCTTCCGTC 59.364 41.667 0.00 0.00 0.00 4.79
3170 4232 4.589908 AGCAAATGAATTACTCCTTCCGT 58.410 39.130 0.00 0.00 0.00 4.69
3171 4233 5.817816 ACTAGCAAATGAATTACTCCTTCCG 59.182 40.000 0.00 0.00 0.00 4.30
3172 4234 7.121315 ACAACTAGCAAATGAATTACTCCTTCC 59.879 37.037 0.00 0.00 0.00 3.46
3173 4235 7.965107 CACAACTAGCAAATGAATTACTCCTTC 59.035 37.037 0.00 0.00 0.00 3.46
3174 4236 7.575720 GCACAACTAGCAAATGAATTACTCCTT 60.576 37.037 0.00 0.00 0.00 3.36
3175 4237 6.127897 GCACAACTAGCAAATGAATTACTCCT 60.128 38.462 0.00 0.00 0.00 3.69
3176 4238 6.030228 GCACAACTAGCAAATGAATTACTCC 58.970 40.000 0.00 0.00 0.00 3.85
3177 4239 6.846350 AGCACAACTAGCAAATGAATTACTC 58.154 36.000 0.00 0.00 0.00 2.59
3178 4240 6.824305 AGCACAACTAGCAAATGAATTACT 57.176 33.333 0.00 0.00 0.00 2.24
3179 4241 6.308766 CCAAGCACAACTAGCAAATGAATTAC 59.691 38.462 0.00 0.00 0.00 1.89
3180 4242 6.389091 CCAAGCACAACTAGCAAATGAATTA 58.611 36.000 0.00 0.00 0.00 1.40
3181 4243 5.232463 CCAAGCACAACTAGCAAATGAATT 58.768 37.500 0.00 0.00 0.00 2.17
3182 4244 4.813027 CCAAGCACAACTAGCAAATGAAT 58.187 39.130 0.00 0.00 0.00 2.57
3183 4245 3.552684 GCCAAGCACAACTAGCAAATGAA 60.553 43.478 0.00 0.00 0.00 2.57
3184 4246 2.030007 GCCAAGCACAACTAGCAAATGA 60.030 45.455 0.00 0.00 0.00 2.57
3185 4247 2.288334 TGCCAAGCACAACTAGCAAATG 60.288 45.455 0.00 0.00 35.47 2.32
3186 4248 1.962807 TGCCAAGCACAACTAGCAAAT 59.037 42.857 0.00 0.00 35.47 2.32
3187 4249 1.397672 TGCCAAGCACAACTAGCAAA 58.602 45.000 0.00 0.00 35.47 3.68
3188 4250 3.108292 TGCCAAGCACAACTAGCAA 57.892 47.368 0.00 0.00 35.47 3.91
3189 4251 4.896402 TGCCAAGCACAACTAGCA 57.104 50.000 0.00 0.00 35.90 3.49
3198 4260 1.155889 CTACAATGTCGTGCCAAGCA 58.844 50.000 0.00 0.00 35.60 3.91
3199 4261 1.156736 ACTACAATGTCGTGCCAAGC 58.843 50.000 0.00 0.00 0.00 4.01
3200 4262 3.845178 TCTACTACAATGTCGTGCCAAG 58.155 45.455 0.49 0.00 0.00 3.61
3201 4263 3.945981 TCTACTACAATGTCGTGCCAA 57.054 42.857 0.49 0.00 0.00 4.52
3202 4264 3.006003 TGTTCTACTACAATGTCGTGCCA 59.994 43.478 0.49 0.00 0.00 4.92
3203 4265 3.581755 TGTTCTACTACAATGTCGTGCC 58.418 45.455 0.49 0.00 0.00 5.01
3204 4266 5.404366 TCTTTGTTCTACTACAATGTCGTGC 59.596 40.000 0.49 0.00 37.81 5.34
3205 4267 6.089551 CCTCTTTGTTCTACTACAATGTCGTG 59.910 42.308 0.49 0.00 37.81 4.35
3206 4268 6.157211 CCTCTTTGTTCTACTACAATGTCGT 58.843 40.000 0.00 0.00 37.81 4.34
3207 4269 5.577164 CCCTCTTTGTTCTACTACAATGTCG 59.423 44.000 0.00 0.00 37.81 4.35
3208 4270 5.351740 GCCCTCTTTGTTCTACTACAATGTC 59.648 44.000 0.00 0.00 37.81 3.06
3209 4271 5.221843 TGCCCTCTTTGTTCTACTACAATGT 60.222 40.000 0.00 0.00 37.81 2.71
3210 4272 5.245531 TGCCCTCTTTGTTCTACTACAATG 58.754 41.667 0.00 0.00 37.81 2.82
3211 4273 5.499004 TGCCCTCTTTGTTCTACTACAAT 57.501 39.130 0.00 0.00 37.81 2.71
3212 4274 4.967084 TGCCCTCTTTGTTCTACTACAA 57.033 40.909 0.00 0.00 36.30 2.41
3213 4275 4.262894 CCTTGCCCTCTTTGTTCTACTACA 60.263 45.833 0.00 0.00 0.00 2.74
3214 4276 4.254492 CCTTGCCCTCTTTGTTCTACTAC 58.746 47.826 0.00 0.00 0.00 2.73
3215 4277 3.263425 CCCTTGCCCTCTTTGTTCTACTA 59.737 47.826 0.00 0.00 0.00 1.82
3216 4278 2.040412 CCCTTGCCCTCTTTGTTCTACT 59.960 50.000 0.00 0.00 0.00 2.57
3217 4279 2.039879 TCCCTTGCCCTCTTTGTTCTAC 59.960 50.000 0.00 0.00 0.00 2.59
3218 4280 2.039879 GTCCCTTGCCCTCTTTGTTCTA 59.960 50.000 0.00 0.00 0.00 2.10
3219 4281 1.149101 TCCCTTGCCCTCTTTGTTCT 58.851 50.000 0.00 0.00 0.00 3.01
3220 4282 1.248486 GTCCCTTGCCCTCTTTGTTC 58.752 55.000 0.00 0.00 0.00 3.18
3221 4283 0.555769 TGTCCCTTGCCCTCTTTGTT 59.444 50.000 0.00 0.00 0.00 2.83
3222 4284 0.555769 TTGTCCCTTGCCCTCTTTGT 59.444 50.000 0.00 0.00 0.00 2.83
3223 4285 1.547372 CATTGTCCCTTGCCCTCTTTG 59.453 52.381 0.00 0.00 0.00 2.77
3224 4286 1.147817 ACATTGTCCCTTGCCCTCTTT 59.852 47.619 0.00 0.00 0.00 2.52
3225 4287 0.779997 ACATTGTCCCTTGCCCTCTT 59.220 50.000 0.00 0.00 0.00 2.85
3226 4288 0.779997 AACATTGTCCCTTGCCCTCT 59.220 50.000 0.00 0.00 0.00 3.69
3227 4289 0.890683 CAACATTGTCCCTTGCCCTC 59.109 55.000 0.00 0.00 0.00 4.30
3228 4290 0.482446 TCAACATTGTCCCTTGCCCT 59.518 50.000 0.00 0.00 0.00 5.19
3229 4291 0.890683 CTCAACATTGTCCCTTGCCC 59.109 55.000 0.00 0.00 0.00 5.36
3230 4292 1.270550 CACTCAACATTGTCCCTTGCC 59.729 52.381 0.00 0.00 0.00 4.52
3231 4293 1.336240 GCACTCAACATTGTCCCTTGC 60.336 52.381 0.00 0.00 0.00 4.01
3232 4294 1.270550 GGCACTCAACATTGTCCCTTG 59.729 52.381 0.00 0.00 0.00 3.61
3233 4295 1.145738 AGGCACTCAACATTGTCCCTT 59.854 47.619 0.00 0.00 0.00 3.95
3234 4296 0.773644 AGGCACTCAACATTGTCCCT 59.226 50.000 0.00 0.00 0.00 4.20
3235 4297 0.883833 CAGGCACTCAACATTGTCCC 59.116 55.000 0.00 0.00 34.60 4.46
3236 4298 1.896220 TCAGGCACTCAACATTGTCC 58.104 50.000 0.00 0.00 34.60 4.02
3237 4299 3.565482 TCTTTCAGGCACTCAACATTGTC 59.435 43.478 0.00 0.00 34.60 3.18
3238 4300 3.554934 TCTTTCAGGCACTCAACATTGT 58.445 40.909 0.00 0.00 34.60 2.71
3239 4301 4.572985 TTCTTTCAGGCACTCAACATTG 57.427 40.909 0.00 0.00 34.60 2.82
3240 4302 5.279156 GGATTTCTTTCAGGCACTCAACATT 60.279 40.000 0.00 0.00 34.60 2.71
3241 4303 4.219288 GGATTTCTTTCAGGCACTCAACAT 59.781 41.667 0.00 0.00 34.60 2.71
3242 4304 3.569701 GGATTTCTTTCAGGCACTCAACA 59.430 43.478 0.00 0.00 34.60 3.33
3243 4305 3.823304 AGGATTTCTTTCAGGCACTCAAC 59.177 43.478 0.00 0.00 34.60 3.18
3244 4306 4.104383 AGGATTTCTTTCAGGCACTCAA 57.896 40.909 0.00 0.00 34.60 3.02
3245 4307 3.795688 AGGATTTCTTTCAGGCACTCA 57.204 42.857 0.00 0.00 34.60 3.41
3246 4308 3.366781 GCAAGGATTTCTTTCAGGCACTC 60.367 47.826 0.00 0.00 30.59 3.51
3247 4309 2.560105 GCAAGGATTTCTTTCAGGCACT 59.440 45.455 0.00 0.00 33.01 4.40
3248 4310 2.297033 TGCAAGGATTTCTTTCAGGCAC 59.703 45.455 0.00 0.00 32.41 5.01
3249 4311 2.596346 TGCAAGGATTTCTTTCAGGCA 58.404 42.857 0.00 0.00 32.41 4.75
3250 4312 3.194116 TGATGCAAGGATTTCTTTCAGGC 59.806 43.478 0.00 0.00 32.52 4.85
3251 4313 5.593679 ATGATGCAAGGATTTCTTTCAGG 57.406 39.130 0.00 0.00 32.52 3.86
3252 4314 8.195436 ACAATATGATGCAAGGATTTCTTTCAG 58.805 33.333 0.00 0.00 32.52 3.02
3253 4315 7.977293 CACAATATGATGCAAGGATTTCTTTCA 59.023 33.333 0.00 0.00 33.46 2.69
3254 4316 7.042925 GCACAATATGATGCAAGGATTTCTTTC 60.043 37.037 6.58 0.00 41.65 2.62
3255 4317 6.759827 GCACAATATGATGCAAGGATTTCTTT 59.240 34.615 6.58 0.00 41.65 2.52
3256 4318 6.278363 GCACAATATGATGCAAGGATTTCTT 58.722 36.000 6.58 0.00 41.65 2.52
3257 4319 5.221382 GGCACAATATGATGCAAGGATTTCT 60.221 40.000 12.23 0.00 43.93 2.52
3258 4320 4.986659 GGCACAATATGATGCAAGGATTTC 59.013 41.667 12.23 0.00 43.93 2.17
3259 4321 4.652421 AGGCACAATATGATGCAAGGATTT 59.348 37.500 12.23 0.00 43.93 2.17
3260 4322 4.220724 AGGCACAATATGATGCAAGGATT 58.779 39.130 12.23 0.00 43.93 3.01
3261 4323 3.825014 GAGGCACAATATGATGCAAGGAT 59.175 43.478 12.23 0.00 43.93 3.24
3262 4324 3.117776 AGAGGCACAATATGATGCAAGGA 60.118 43.478 12.23 0.00 43.93 3.36
3263 4325 3.220110 AGAGGCACAATATGATGCAAGG 58.780 45.455 12.23 0.00 43.93 3.61
3264 4326 4.337274 TGAAGAGGCACAATATGATGCAAG 59.663 41.667 12.23 0.00 43.93 4.01
3265 4327 4.271661 TGAAGAGGCACAATATGATGCAA 58.728 39.130 12.23 0.00 43.93 4.08
3266 4328 3.881089 CTGAAGAGGCACAATATGATGCA 59.119 43.478 12.23 0.00 43.93 3.96
3267 4329 4.132336 TCTGAAGAGGCACAATATGATGC 58.868 43.478 3.35 3.35 41.29 3.91
3268 4330 6.053650 TCTTCTGAAGAGGCACAATATGATG 58.946 40.000 15.82 0.00 32.71 3.07
3269 4331 6.244552 TCTTCTGAAGAGGCACAATATGAT 57.755 37.500 15.82 0.00 32.71 2.45
3270 4332 5.682234 TCTTCTGAAGAGGCACAATATGA 57.318 39.130 15.82 0.00 32.71 2.15
3271 4333 6.939132 AATCTTCTGAAGAGGCACAATATG 57.061 37.500 23.04 0.00 41.61 1.78
3272 4334 7.714377 CACTAATCTTCTGAAGAGGCACAATAT 59.286 37.037 23.04 2.81 41.61 1.28
3273 4335 7.044181 CACTAATCTTCTGAAGAGGCACAATA 58.956 38.462 23.04 8.34 41.61 1.90
3274 4336 5.879223 CACTAATCTTCTGAAGAGGCACAAT 59.121 40.000 23.04 4.18 41.61 2.71
3275 4337 5.221722 ACACTAATCTTCTGAAGAGGCACAA 60.222 40.000 23.04 1.09 41.61 3.33
3276 4338 4.284490 ACACTAATCTTCTGAAGAGGCACA 59.716 41.667 23.04 7.41 41.61 4.57
3277 4339 4.629200 CACACTAATCTTCTGAAGAGGCAC 59.371 45.833 23.04 0.00 41.61 5.01
3278 4340 4.323028 CCACACTAATCTTCTGAAGAGGCA 60.323 45.833 23.04 11.02 41.61 4.75
3279 4341 4.081420 TCCACACTAATCTTCTGAAGAGGC 60.081 45.833 23.04 0.00 41.61 4.70
3280 4342 5.047021 TGTCCACACTAATCTTCTGAAGAGG 60.047 44.000 23.04 16.77 41.61 3.69
3281 4343 6.030548 TGTCCACACTAATCTTCTGAAGAG 57.969 41.667 23.04 13.40 41.61 2.85
3282 4344 6.042093 ACTTGTCCACACTAATCTTCTGAAGA 59.958 38.462 21.32 21.32 42.69 2.87
3283 4345 6.226787 ACTTGTCCACACTAATCTTCTGAAG 58.773 40.000 11.18 11.18 0.00 3.02
3284 4346 6.174720 ACTTGTCCACACTAATCTTCTGAA 57.825 37.500 0.00 0.00 0.00 3.02
3285 4347 5.808366 ACTTGTCCACACTAATCTTCTGA 57.192 39.130 0.00 0.00 0.00 3.27
3286 4348 7.657761 ACTTAACTTGTCCACACTAATCTTCTG 59.342 37.037 0.00 0.00 0.00 3.02
3287 4349 7.657761 CACTTAACTTGTCCACACTAATCTTCT 59.342 37.037 0.00 0.00 0.00 2.85
3288 4350 7.571428 GCACTTAACTTGTCCACACTAATCTTC 60.571 40.741 0.00 0.00 0.00 2.87
3289 4351 6.204882 GCACTTAACTTGTCCACACTAATCTT 59.795 38.462 0.00 0.00 0.00 2.40
3290 4352 5.701290 GCACTTAACTTGTCCACACTAATCT 59.299 40.000 0.00 0.00 0.00 2.40
3291 4353 5.389516 CGCACTTAACTTGTCCACACTAATC 60.390 44.000 0.00 0.00 0.00 1.75
3292 4354 4.451096 CGCACTTAACTTGTCCACACTAAT 59.549 41.667 0.00 0.00 0.00 1.73
3293 4355 3.805422 CGCACTTAACTTGTCCACACTAA 59.195 43.478 0.00 0.00 0.00 2.24
3294 4356 3.181473 ACGCACTTAACTTGTCCACACTA 60.181 43.478 0.00 0.00 0.00 2.74
3295 4357 2.210116 CGCACTTAACTTGTCCACACT 58.790 47.619 0.00 0.00 0.00 3.55
3296 4358 1.937899 ACGCACTTAACTTGTCCACAC 59.062 47.619 0.00 0.00 0.00 3.82
3297 4359 2.319136 ACGCACTTAACTTGTCCACA 57.681 45.000 0.00 0.00 0.00 4.17
3298 4360 3.685836 AAACGCACTTAACTTGTCCAC 57.314 42.857 0.00 0.00 0.00 4.02
3299 4361 4.705337 AAAAACGCACTTAACTTGTCCA 57.295 36.364 0.00 0.00 0.00 4.02
3317 4379 9.263446 TCTCAACTCTAGTATTAGGGCTAAAAA 57.737 33.333 0.00 0.00 29.85 1.94
3318 4380 8.834004 TCTCAACTCTAGTATTAGGGCTAAAA 57.166 34.615 0.00 0.00 29.85 1.52
3319 4381 8.861086 CATCTCAACTCTAGTATTAGGGCTAAA 58.139 37.037 0.00 0.00 29.85 1.85
3320 4382 8.225416 TCATCTCAACTCTAGTATTAGGGCTAA 58.775 37.037 0.00 0.00 29.85 3.09
3321 4383 7.756614 TCATCTCAACTCTAGTATTAGGGCTA 58.243 38.462 0.00 0.00 29.85 3.93
3322 4384 6.615617 TCATCTCAACTCTAGTATTAGGGCT 58.384 40.000 0.00 0.00 29.85 5.19
3323 4385 6.902771 TCATCTCAACTCTAGTATTAGGGC 57.097 41.667 0.00 0.00 29.85 5.19
3324 4386 8.698973 TCTTCATCTCAACTCTAGTATTAGGG 57.301 38.462 0.00 0.00 33.32 3.53
3331 4393 9.566432 AATTTGTTTCTTCATCTCAACTCTAGT 57.434 29.630 0.00 0.00 0.00 2.57
3334 4396 7.650903 GCAAATTTGTTTCTTCATCTCAACTCT 59.349 33.333 19.03 0.00 0.00 3.24
3335 4397 7.436080 TGCAAATTTGTTTCTTCATCTCAACTC 59.564 33.333 19.03 0.00 0.00 3.01
3336 4398 7.267128 TGCAAATTTGTTTCTTCATCTCAACT 58.733 30.769 19.03 0.00 0.00 3.16
3337 4399 7.467557 TGCAAATTTGTTTCTTCATCTCAAC 57.532 32.000 19.03 0.00 0.00 3.18
3338 4400 6.201425 GCTGCAAATTTGTTTCTTCATCTCAA 59.799 34.615 19.03 0.00 0.00 3.02
3339 4401 5.693104 GCTGCAAATTTGTTTCTTCATCTCA 59.307 36.000 19.03 3.74 0.00 3.27
3340 4402 5.693104 TGCTGCAAATTTGTTTCTTCATCTC 59.307 36.000 19.03 0.00 0.00 2.75
3341 4403 5.603596 TGCTGCAAATTTGTTTCTTCATCT 58.396 33.333 19.03 0.00 0.00 2.90
3342 4404 5.464389 ACTGCTGCAAATTTGTTTCTTCATC 59.536 36.000 19.03 4.47 0.00 2.92
3343 4405 5.362263 ACTGCTGCAAATTTGTTTCTTCAT 58.638 33.333 19.03 0.00 0.00 2.57
3344 4406 4.757594 ACTGCTGCAAATTTGTTTCTTCA 58.242 34.783 19.03 6.86 0.00 3.02
3345 4407 5.723492 AACTGCTGCAAATTTGTTTCTTC 57.277 34.783 19.03 2.48 0.00 2.87
3346 4408 5.642919 TCAAACTGCTGCAAATTTGTTTCTT 59.357 32.000 25.84 4.52 34.40 2.52
3347 4409 5.177326 TCAAACTGCTGCAAATTTGTTTCT 58.823 33.333 25.84 5.07 34.40 2.52
3348 4410 5.467902 TCAAACTGCTGCAAATTTGTTTC 57.532 34.783 25.84 8.91 34.40 2.78
3349 4411 5.876612 TTCAAACTGCTGCAAATTTGTTT 57.123 30.435 25.84 19.02 34.40 2.83
3350 4412 7.733402 ATATTCAAACTGCTGCAAATTTGTT 57.267 28.000 25.84 19.98 34.40 2.83
3351 4413 8.830201 TTATATTCAAACTGCTGCAAATTTGT 57.170 26.923 25.84 16.65 34.40 2.83
3352 4414 9.697250 CATTATATTCAAACTGCTGCAAATTTG 57.303 29.630 23.23 23.23 34.11 2.32
3353 4415 9.656040 TCATTATATTCAAACTGCTGCAAATTT 57.344 25.926 3.02 4.76 0.00 1.82
3354 4416 9.090692 GTCATTATATTCAAACTGCTGCAAATT 57.909 29.630 3.02 0.00 0.00 1.82
3355 4417 7.707893 GGTCATTATATTCAAACTGCTGCAAAT 59.292 33.333 3.02 2.71 0.00 2.32
3356 4418 7.035004 GGTCATTATATTCAAACTGCTGCAAA 58.965 34.615 3.02 0.00 0.00 3.68
3357 4419 6.563422 GGTCATTATATTCAAACTGCTGCAA 58.437 36.000 3.02 0.00 0.00 4.08
3358 4420 5.220835 CGGTCATTATATTCAAACTGCTGCA 60.221 40.000 0.88 0.88 0.00 4.41
3359 4421 5.207768 CGGTCATTATATTCAAACTGCTGC 58.792 41.667 0.00 0.00 0.00 5.25
3360 4422 6.194463 CACGGTCATTATATTCAAACTGCTG 58.806 40.000 0.00 0.00 0.00 4.41
3361 4423 5.296780 CCACGGTCATTATATTCAAACTGCT 59.703 40.000 0.00 0.00 0.00 4.24
3362 4424 5.510671 CCACGGTCATTATATTCAAACTGC 58.489 41.667 0.00 0.00 0.00 4.40
3363 4425 5.065859 TGCCACGGTCATTATATTCAAACTG 59.934 40.000 0.00 0.00 0.00 3.16
3364 4426 5.065988 GTGCCACGGTCATTATATTCAAACT 59.934 40.000 0.00 0.00 0.00 2.66
3365 4427 5.065988 AGTGCCACGGTCATTATATTCAAAC 59.934 40.000 0.00 0.00 0.00 2.93
3366 4428 5.189928 AGTGCCACGGTCATTATATTCAAA 58.810 37.500 0.00 0.00 0.00 2.69
3367 4429 4.776349 AGTGCCACGGTCATTATATTCAA 58.224 39.130 0.00 0.00 0.00 2.69
3368 4430 4.415881 AGTGCCACGGTCATTATATTCA 57.584 40.909 0.00 0.00 0.00 2.57
3369 4431 6.128282 CCAATAGTGCCACGGTCATTATATTC 60.128 42.308 0.00 0.00 0.00 1.75
3370 4432 5.705441 CCAATAGTGCCACGGTCATTATATT 59.295 40.000 0.00 0.00 0.00 1.28
3371 4433 5.012664 TCCAATAGTGCCACGGTCATTATAT 59.987 40.000 0.00 0.00 0.00 0.86
3372 4434 4.345547 TCCAATAGTGCCACGGTCATTATA 59.654 41.667 0.00 0.00 0.00 0.98
3373 4435 3.135712 TCCAATAGTGCCACGGTCATTAT 59.864 43.478 0.00 0.00 0.00 1.28
3374 4436 2.502130 TCCAATAGTGCCACGGTCATTA 59.498 45.455 0.00 0.00 0.00 1.90
3375 4437 1.280710 TCCAATAGTGCCACGGTCATT 59.719 47.619 0.00 0.00 0.00 2.57
3376 4438 0.908910 TCCAATAGTGCCACGGTCAT 59.091 50.000 0.00 0.00 0.00 3.06
3377 4439 0.908910 ATCCAATAGTGCCACGGTCA 59.091 50.000 0.00 0.00 0.00 4.02
3378 4440 2.902705 TATCCAATAGTGCCACGGTC 57.097 50.000 0.00 0.00 0.00 4.79
3379 4441 3.857157 AATATCCAATAGTGCCACGGT 57.143 42.857 0.00 0.00 0.00 4.83
3380 4442 6.173339 AGATAAATATCCAATAGTGCCACGG 58.827 40.000 0.00 0.00 33.17 4.94
3381 4443 8.251026 TCTAGATAAATATCCAATAGTGCCACG 58.749 37.037 0.00 0.00 33.17 4.94
3382 4444 9.372369 GTCTAGATAAATATCCAATAGTGCCAC 57.628 37.037 0.00 0.00 33.17 5.01
3383 4445 9.326489 AGTCTAGATAAATATCCAATAGTGCCA 57.674 33.333 0.00 0.00 33.17 4.92
3398 4460 9.653287 CAACAGTGAATGGTAAGTCTAGATAAA 57.347 33.333 0.00 0.00 0.00 1.40
3399 4461 8.258007 CCAACAGTGAATGGTAAGTCTAGATAA 58.742 37.037 0.00 0.00 31.84 1.75
3400 4462 7.782049 CCAACAGTGAATGGTAAGTCTAGATA 58.218 38.462 0.00 0.00 31.84 1.98
3401 4463 6.644347 CCAACAGTGAATGGTAAGTCTAGAT 58.356 40.000 0.00 0.00 31.84 1.98
3402 4464 6.037786 CCAACAGTGAATGGTAAGTCTAGA 57.962 41.667 0.00 0.00 31.84 2.43
3412 4474 6.316390 GTCCTATCTAAACCAACAGTGAATGG 59.684 42.308 15.28 15.28 42.60 3.16
3413 4475 6.878923 TGTCCTATCTAAACCAACAGTGAATG 59.121 38.462 0.00 0.00 0.00 2.67
3414 4476 6.879458 GTGTCCTATCTAAACCAACAGTGAAT 59.121 38.462 0.00 0.00 0.00 2.57
3415 4477 6.183361 TGTGTCCTATCTAAACCAACAGTGAA 60.183 38.462 0.00 0.00 0.00 3.18
3416 4478 5.305902 TGTGTCCTATCTAAACCAACAGTGA 59.694 40.000 0.00 0.00 0.00 3.41
3417 4479 5.408604 GTGTGTCCTATCTAAACCAACAGTG 59.591 44.000 0.00 0.00 0.00 3.66
3418 4480 5.307196 AGTGTGTCCTATCTAAACCAACAGT 59.693 40.000 0.00 0.00 0.00 3.55
3419 4481 5.639506 CAGTGTGTCCTATCTAAACCAACAG 59.360 44.000 0.00 0.00 0.00 3.16
3420 4482 5.071250 ACAGTGTGTCCTATCTAAACCAACA 59.929 40.000 0.00 0.00 0.00 3.33
3421 4483 5.548406 ACAGTGTGTCCTATCTAAACCAAC 58.452 41.667 0.00 0.00 0.00 3.77
3422 4484 5.818678 ACAGTGTGTCCTATCTAAACCAA 57.181 39.130 0.00 0.00 0.00 3.67
3423 4485 5.818678 AACAGTGTGTCCTATCTAAACCA 57.181 39.130 0.00 0.00 0.00 3.67
3424 4486 5.642491 GGAAACAGTGTGTCCTATCTAAACC 59.358 44.000 23.36 0.00 37.01 3.27
3425 4487 6.228258 TGGAAACAGTGTGTCCTATCTAAAC 58.772 40.000 28.94 4.16 40.45 2.01
3426 4488 6.428083 TGGAAACAGTGTGTCCTATCTAAA 57.572 37.500 28.94 8.04 40.45 1.85
3451 4513 7.236432 TCCCATAATTCTTCAATCCACCAAAAA 59.764 33.333 0.00 0.00 0.00 1.94
3452 4514 6.728164 TCCCATAATTCTTCAATCCACCAAAA 59.272 34.615 0.00 0.00 0.00 2.44
3453 4515 6.259893 TCCCATAATTCTTCAATCCACCAAA 58.740 36.000 0.00 0.00 0.00 3.28
3454 4516 5.836705 TCCCATAATTCTTCAATCCACCAA 58.163 37.500 0.00 0.00 0.00 3.67
3455 4517 5.464588 TCCCATAATTCTTCAATCCACCA 57.535 39.130 0.00 0.00 0.00 4.17
3456 4518 6.070656 TCATCCCATAATTCTTCAATCCACC 58.929 40.000 0.00 0.00 0.00 4.61
3457 4519 7.587037 TTCATCCCATAATTCTTCAATCCAC 57.413 36.000 0.00 0.00 0.00 4.02
3458 4520 7.288389 CCTTTCATCCCATAATTCTTCAATCCA 59.712 37.037 0.00 0.00 0.00 3.41
3459 4521 7.256083 CCCTTTCATCCCATAATTCTTCAATCC 60.256 40.741 0.00 0.00 0.00 3.01
3460 4522 7.506938 TCCCTTTCATCCCATAATTCTTCAATC 59.493 37.037 0.00 0.00 0.00 2.67
3461 4523 7.364627 TCCCTTTCATCCCATAATTCTTCAAT 58.635 34.615 0.00 0.00 0.00 2.57
3462 4524 6.740693 TCCCTTTCATCCCATAATTCTTCAA 58.259 36.000 0.00 0.00 0.00 2.69
3463 4525 6.339999 TCCCTTTCATCCCATAATTCTTCA 57.660 37.500 0.00 0.00 0.00 3.02
3464 4526 7.013750 GTCTTCCCTTTCATCCCATAATTCTTC 59.986 40.741 0.00 0.00 0.00 2.87
3465 4527 6.836007 GTCTTCCCTTTCATCCCATAATTCTT 59.164 38.462 0.00 0.00 0.00 2.52
3466 4528 6.068853 TGTCTTCCCTTTCATCCCATAATTCT 60.069 38.462 0.00 0.00 0.00 2.40
3467 4529 6.129179 TGTCTTCCCTTTCATCCCATAATTC 58.871 40.000 0.00 0.00 0.00 2.17
3468 4530 6.091076 TGTCTTCCCTTTCATCCCATAATT 57.909 37.500 0.00 0.00 0.00 1.40
3469 4531 5.732331 TGTCTTCCCTTTCATCCCATAAT 57.268 39.130 0.00 0.00 0.00 1.28
3470 4532 5.015178 AGTTGTCTTCCCTTTCATCCCATAA 59.985 40.000 0.00 0.00 0.00 1.90
3471 4533 4.540099 AGTTGTCTTCCCTTTCATCCCATA 59.460 41.667 0.00 0.00 0.00 2.74
3472 4534 3.334881 AGTTGTCTTCCCTTTCATCCCAT 59.665 43.478 0.00 0.00 0.00 4.00
3473 4535 2.716424 AGTTGTCTTCCCTTTCATCCCA 59.284 45.455 0.00 0.00 0.00 4.37
3474 4536 3.441500 AGTTGTCTTCCCTTTCATCCC 57.558 47.619 0.00 0.00 0.00 3.85
3475 4537 4.827284 TGAAAGTTGTCTTCCCTTTCATCC 59.173 41.667 9.33 0.00 45.38 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.