Multiple sequence alignment - TraesCS1D01G141700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G141700 chr1D 100.000 3875 0 0 1 3875 196092295 196096169 0.000000e+00 7156
1 TraesCS1D01G141700 chr1D 94.548 807 38 4 1 805 426912300 426911498 0.000000e+00 1242
2 TraesCS1D01G141700 chr1D 93.432 807 42 8 1 805 33407328 33406531 0.000000e+00 1186
3 TraesCS1D01G141700 chr1D 94.924 394 20 0 3482 3875 19875237 19874844 5.500000e-173 617
4 TraesCS1D01G141700 chr1D 94.402 393 22 0 3483 3875 250741386 250740994 4.280000e-169 604
5 TraesCS1D01G141700 chr1B 97.309 2453 56 4 806 3249 269221416 269218965 0.000000e+00 4156
6 TraesCS1D01G141700 chr1B 87.879 132 6 5 3249 3380 269211099 269210978 3.120000e-31 147
7 TraesCS1D01G141700 chr1A 96.082 2552 74 9 811 3358 245115294 245117823 0.000000e+00 4135
8 TraesCS1D01G141700 chr1A 94.118 102 6 0 3349 3450 245118482 245118583 5.180000e-34 156
9 TraesCS1D01G141700 chr6D 94.337 830 41 6 1 825 340435260 340436088 0.000000e+00 1267
10 TraesCS1D01G141700 chr6D 92.822 808 51 7 2 805 199213850 199214654 0.000000e+00 1164
11 TraesCS1D01G141700 chr2D 94.802 808 36 6 1 805 189281067 189281871 0.000000e+00 1254
12 TraesCS1D01G141700 chr2D 94.250 400 21 1 3476 3875 10825714 10826111 9.200000e-171 610
13 TraesCS1D01G141700 chr3D 94.183 808 41 5 1 805 498403461 498404265 0.000000e+00 1227
14 TraesCS1D01G141700 chr5D 93.513 817 45 8 1 813 407015090 407015902 0.000000e+00 1208
15 TraesCS1D01G141700 chr5D 94.684 395 21 0 3481 3875 94510414 94510808 7.120000e-172 614
16 TraesCS1D01G141700 chr5D 94.416 394 22 0 3482 3875 342525684 342526077 1.190000e-169 606
17 TraesCS1D01G141700 chr4D 93.688 808 46 5 1 805 97494735 97495540 0.000000e+00 1205
18 TraesCS1D01G141700 chr4D 94.430 395 22 0 3481 3875 453054578 453054184 3.310000e-170 608
19 TraesCS1D01G141700 chr4D 94.192 396 23 0 3480 3875 406229367 406229762 4.280000e-169 604
20 TraesCS1D01G141700 chr7D 90.354 819 67 12 1 813 614073152 614073964 0.000000e+00 1064
21 TraesCS1D01G141700 chr7D 94.402 393 22 0 3483 3875 136708146 136707754 4.280000e-169 604
22 TraesCS1D01G141700 chr3A 94.416 394 22 0 3482 3875 42451889 42451496 1.190000e-169 606


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G141700 chr1D 196092295 196096169 3874 False 7156.0 7156 100.000 1 3875 1 chr1D.!!$F1 3874
1 TraesCS1D01G141700 chr1D 426911498 426912300 802 True 1242.0 1242 94.548 1 805 1 chr1D.!!$R4 804
2 TraesCS1D01G141700 chr1D 33406531 33407328 797 True 1186.0 1186 93.432 1 805 1 chr1D.!!$R2 804
3 TraesCS1D01G141700 chr1B 269218965 269221416 2451 True 4156.0 4156 97.309 806 3249 1 chr1B.!!$R2 2443
4 TraesCS1D01G141700 chr1A 245115294 245118583 3289 False 2145.5 4135 95.100 811 3450 2 chr1A.!!$F1 2639
5 TraesCS1D01G141700 chr6D 340435260 340436088 828 False 1267.0 1267 94.337 1 825 1 chr6D.!!$F2 824
6 TraesCS1D01G141700 chr6D 199213850 199214654 804 False 1164.0 1164 92.822 2 805 1 chr6D.!!$F1 803
7 TraesCS1D01G141700 chr2D 189281067 189281871 804 False 1254.0 1254 94.802 1 805 1 chr2D.!!$F2 804
8 TraesCS1D01G141700 chr3D 498403461 498404265 804 False 1227.0 1227 94.183 1 805 1 chr3D.!!$F1 804
9 TraesCS1D01G141700 chr5D 407015090 407015902 812 False 1208.0 1208 93.513 1 813 1 chr5D.!!$F3 812
10 TraesCS1D01G141700 chr4D 97494735 97495540 805 False 1205.0 1205 93.688 1 805 1 chr4D.!!$F1 804
11 TraesCS1D01G141700 chr7D 614073152 614073964 812 False 1064.0 1064 90.354 1 813 1 chr7D.!!$F1 812

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
758 770 0.174617 TGTCGATGCCATACGAAGCA 59.825 50.000 0.00 0.00 44.45 3.91 F
805 822 0.599060 TGTGGCAGTTATCGACGTCA 59.401 50.000 17.16 3.13 0.00 4.35 F
1968 1991 1.067582 CCGCGGAAGGTACCTCATC 59.932 63.158 24.07 10.14 0.00 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1881 1904 0.453793 CGCCAACAACAAACACCTGA 59.546 50.0 0.00 0.0 0.00 3.86 R
2022 2045 1.016130 CCTCACCTAGCGCACACAAG 61.016 60.0 11.47 0.0 0.00 3.16 R
3805 4502 0.032130 GCTAGGCGCTGCACTGTATA 59.968 55.0 7.64 0.0 35.14 1.47 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 8.577048 TTTTACCCCGAATATGTTATTGTTGA 57.423 30.769 0.00 0.00 0.00 3.18
106 107 5.162075 CAACTGTCTAGTGTTAGTAGGTGC 58.838 45.833 0.00 0.00 37.19 5.01
295 303 0.804989 GTGCTACATGGCAACTGTCC 59.195 55.000 0.00 0.00 44.18 4.02
297 305 1.202867 TGCTACATGGCAACTGTCCAA 60.203 47.619 0.00 0.00 39.43 3.53
336 345 7.653311 GCAACTCCTAAAGTTTTCAAATCATGT 59.347 33.333 0.00 0.00 46.26 3.21
497 506 0.824595 ATGGCAACTGCAGTTCAGCA 60.825 50.000 31.28 21.79 46.76 4.41
555 567 2.607892 GGACCATAGCAATCGCGGC 61.608 63.158 6.13 0.89 45.49 6.53
556 568 2.943345 GACCATAGCAATCGCGGCG 61.943 63.158 17.70 17.70 45.49 6.46
557 569 3.716006 CCATAGCAATCGCGGCGG 61.716 66.667 23.46 7.70 45.49 6.13
667 679 4.794439 CGGACGTGCTCATGCGGA 62.794 66.667 5.27 0.00 43.34 5.54
750 762 1.221840 GGGTCTGTGTCGATGCCAT 59.778 57.895 0.00 0.00 0.00 4.40
758 770 0.174617 TGTCGATGCCATACGAAGCA 59.825 50.000 0.00 0.00 44.45 3.91
762 774 4.633769 TGCCATACGAAGCATGCA 57.366 50.000 21.98 0.00 33.08 3.96
805 822 0.599060 TGTGGCAGTTATCGACGTCA 59.401 50.000 17.16 3.13 0.00 4.35
1428 1451 4.785453 GCCCAGGAGGACAAGCCG 62.785 72.222 0.00 0.00 43.43 5.52
1515 1538 1.153842 CCTGCTCATGCGTACGTCA 60.154 57.895 17.90 15.30 43.34 4.35
1711 1734 2.742372 CCCTCGTGGTGGAAAGCG 60.742 66.667 2.33 0.00 0.00 4.68
1881 1904 1.375140 CACCACGACTGCTGCAGAT 60.375 57.895 34.28 18.98 35.18 2.90
1923 1946 1.307355 CCGTCAATGACAGCATGCCA 61.307 55.000 15.66 5.74 42.53 4.92
1935 1958 2.045926 ATGCCAGTGGTCGCTTCC 60.046 61.111 11.74 0.00 0.00 3.46
1968 1991 1.067582 CCGCGGAAGGTACCTCATC 59.932 63.158 24.07 10.14 0.00 2.92
1989 2012 3.402681 ATGGGCGGTGGTGAGAGG 61.403 66.667 0.00 0.00 0.00 3.69
2022 2045 2.215942 ACCACTACATTTGGGGCTTC 57.784 50.000 0.00 0.00 38.59 3.86
2055 2078 0.235926 GTGAGGCGCAGTTCTTGAAC 59.764 55.000 10.83 5.44 0.00 3.18
2580 2603 4.012374 CACTCAATGATAAGGTTGGTGCT 58.988 43.478 0.00 0.00 0.00 4.40
2715 2738 7.701539 AAATAGTGAATGGTATGCTGAAACA 57.298 32.000 0.00 0.00 0.00 2.83
2772 2795 2.084546 GGTTACATGAGGGTTGCAGTC 58.915 52.381 0.00 0.00 0.00 3.51
2824 2847 5.006386 GGAAGTTGGAGACATTCAATGACT 58.994 41.667 3.79 2.66 42.32 3.41
2878 2901 1.889573 GCAGCCGCCTCCTGAATAC 60.890 63.158 0.00 0.00 32.03 1.89
2882 2905 1.686325 GCCGCCTCCTGAATACCTGA 61.686 60.000 0.00 0.00 0.00 3.86
2895 2918 5.989477 TGAATACCTGATTGAGTAAGGTGG 58.011 41.667 3.85 0.00 44.13 4.61
2897 2920 2.915869 ACCTGATTGAGTAAGGTGGGA 58.084 47.619 0.00 0.00 42.78 4.37
3028 3051 7.956508 TGTTTTGTTGTAACACTATTGTTCG 57.043 32.000 1.18 0.00 42.67 3.95
3030 3053 5.736486 TTGTTGTAACACTATTGTTCGCA 57.264 34.783 1.18 1.06 42.67 5.10
3062 3085 6.456501 GCCCAGATTACACTAGTTTATCGAT 58.543 40.000 2.16 2.16 0.00 3.59
3069 3092 7.766219 TTACACTAGTTTATCGATTTCAGCC 57.234 36.000 1.71 0.00 0.00 4.85
3073 3096 2.936498 AGTTTATCGATTTCAGCCACGG 59.064 45.455 1.71 0.00 0.00 4.94
3131 3160 7.938563 TTTTGGTTATGTTACTTGTTGCATC 57.061 32.000 0.00 0.00 0.00 3.91
3166 3195 4.999751 AACTCAGAAATTCGCTGTCTTC 57.000 40.909 7.81 0.00 34.98 2.87
3201 3230 3.318017 CTGTAACCTGAGAAAGTCACGG 58.682 50.000 0.00 0.00 32.53 4.94
3223 3252 7.908601 CACGGCCTTATATTTCTTTTCTTACAC 59.091 37.037 0.00 0.00 0.00 2.90
3252 3281 8.383175 AGATTTGGTTCAGTTTAAGAGTATGGA 58.617 33.333 0.00 0.00 0.00 3.41
3264 3293 2.697751 AGAGTATGGAAGAGCGCTGAAT 59.302 45.455 18.48 0.00 0.00 2.57
3283 3312 7.210873 GCTGAATATTACTACTGCCAGTAACT 58.789 38.462 5.98 0.00 42.28 2.24
3284 3313 7.169982 GCTGAATATTACTACTGCCAGTAACTG 59.830 40.741 5.98 0.00 42.28 3.16
3285 3314 8.301252 TGAATATTACTACTGCCAGTAACTGA 57.699 34.615 5.98 0.00 42.28 3.41
3286 3315 8.755028 TGAATATTACTACTGCCAGTAACTGAA 58.245 33.333 5.98 0.00 42.28 3.02
3287 3316 9.595823 GAATATTACTACTGCCAGTAACTGAAA 57.404 33.333 5.98 0.00 42.28 2.69
3296 3325 4.634004 TGCCAGTAACTGAAATGAATACCG 59.366 41.667 0.00 0.00 32.44 4.02
3335 3364 0.252558 TCCTCTTAGGGGAAGGCGTT 60.253 55.000 0.00 0.00 35.59 4.84
3340 3369 3.109151 TCTTAGGGGAAGGCGTTTATCA 58.891 45.455 0.00 0.00 35.67 2.15
3343 3372 1.486726 AGGGGAAGGCGTTTATCAGAG 59.513 52.381 0.00 0.00 0.00 3.35
3392 4089 1.339291 TCTGATAGGCTGATGACGCAG 59.661 52.381 0.00 0.00 38.91 5.18
3406 4103 3.253230 TGACGCAGATAGTTGTGATGTG 58.747 45.455 0.00 0.00 32.97 3.21
3420 4117 3.808726 TGTGATGTGCCAAATCAAAAAGC 59.191 39.130 0.00 0.00 35.87 3.51
3428 4125 3.182372 GCCAAATCAAAAAGCACTTCGTC 59.818 43.478 0.00 0.00 0.00 4.20
3438 4135 0.708918 GCACTTCGTCTACGCTTGAC 59.291 55.000 0.00 0.00 39.60 3.18
3450 4147 0.025001 CGCTTGACGTAGGATTTGCG 59.975 55.000 0.00 0.00 41.00 4.85
3451 4148 0.373716 GCTTGACGTAGGATTTGCGG 59.626 55.000 0.00 0.00 39.39 5.69
3452 4149 2.004583 CTTGACGTAGGATTTGCGGA 57.995 50.000 0.00 0.00 39.39 5.54
3453 4150 2.343101 CTTGACGTAGGATTTGCGGAA 58.657 47.619 0.00 0.00 39.39 4.30
3454 4151 2.459060 TGACGTAGGATTTGCGGAAA 57.541 45.000 4.04 4.04 39.39 3.13
3455 4152 2.980568 TGACGTAGGATTTGCGGAAAT 58.019 42.857 15.24 15.24 39.39 2.17
3456 4153 3.340034 TGACGTAGGATTTGCGGAAATT 58.660 40.909 16.39 4.13 39.39 1.82
3457 4154 4.505808 TGACGTAGGATTTGCGGAAATTA 58.494 39.130 16.39 3.13 39.39 1.40
3458 4155 4.569162 TGACGTAGGATTTGCGGAAATTAG 59.431 41.667 16.39 8.66 39.39 1.73
3459 4156 4.761975 ACGTAGGATTTGCGGAAATTAGA 58.238 39.130 16.39 2.01 39.39 2.10
3460 4157 5.180271 ACGTAGGATTTGCGGAAATTAGAA 58.820 37.500 16.39 0.51 39.39 2.10
3461 4158 5.064325 ACGTAGGATTTGCGGAAATTAGAAC 59.936 40.000 16.39 11.01 39.39 3.01
3462 4159 5.064198 CGTAGGATTTGCGGAAATTAGAACA 59.936 40.000 16.39 0.00 31.58 3.18
3463 4160 5.975693 AGGATTTGCGGAAATTAGAACAA 57.024 34.783 16.39 0.00 31.58 2.83
3464 4161 6.339587 AGGATTTGCGGAAATTAGAACAAA 57.660 33.333 16.39 0.00 31.58 2.83
3465 4162 6.389906 AGGATTTGCGGAAATTAGAACAAAG 58.610 36.000 16.39 0.00 31.58 2.77
3466 4163 6.208599 AGGATTTGCGGAAATTAGAACAAAGA 59.791 34.615 16.39 0.00 31.58 2.52
3467 4164 7.035612 GGATTTGCGGAAATTAGAACAAAGAT 58.964 34.615 16.39 0.00 31.58 2.40
3468 4165 8.188139 GGATTTGCGGAAATTAGAACAAAGATA 58.812 33.333 16.39 0.00 31.58 1.98
3469 4166 9.736023 GATTTGCGGAAATTAGAACAAAGATAT 57.264 29.630 16.39 0.00 31.58 1.63
3470 4167 9.736023 ATTTGCGGAAATTAGAACAAAGATATC 57.264 29.630 9.31 0.00 31.28 1.63
3471 4168 7.857734 TGCGGAAATTAGAACAAAGATATCA 57.142 32.000 5.32 0.00 0.00 2.15
3472 4169 8.450578 TGCGGAAATTAGAACAAAGATATCAT 57.549 30.769 5.32 0.00 0.00 2.45
3473 4170 8.559536 TGCGGAAATTAGAACAAAGATATCATC 58.440 33.333 5.32 0.00 0.00 2.92
3474 4171 8.559536 GCGGAAATTAGAACAAAGATATCATCA 58.440 33.333 5.32 0.00 0.00 3.07
3482 4179 7.637229 AGAACAAAGATATCATCATTCTTGCG 58.363 34.615 5.32 0.00 30.41 4.85
3483 4180 6.309712 ACAAAGATATCATCATTCTTGCGG 57.690 37.500 5.32 0.00 30.41 5.69
3484 4181 5.152097 CAAAGATATCATCATTCTTGCGGC 58.848 41.667 5.32 0.00 30.41 6.53
3485 4182 4.011966 AGATATCATCATTCTTGCGGCA 57.988 40.909 5.32 0.00 0.00 5.69
3486 4183 4.392047 AGATATCATCATTCTTGCGGCAA 58.608 39.130 15.55 15.55 0.00 4.52
3487 4184 4.823442 AGATATCATCATTCTTGCGGCAAA 59.177 37.500 17.13 2.96 0.00 3.68
3488 4185 3.872511 ATCATCATTCTTGCGGCAAAA 57.127 38.095 17.13 13.48 0.00 2.44
3489 4186 3.872511 TCATCATTCTTGCGGCAAAAT 57.127 38.095 17.13 14.97 0.00 1.82
3490 4187 4.191033 TCATCATTCTTGCGGCAAAATT 57.809 36.364 17.13 0.00 0.00 1.82
3491 4188 3.927758 TCATCATTCTTGCGGCAAAATTG 59.072 39.130 17.13 10.42 0.00 2.32
3492 4189 3.657015 TCATTCTTGCGGCAAAATTGA 57.343 38.095 17.13 12.58 0.00 2.57
3493 4190 3.316283 TCATTCTTGCGGCAAAATTGAC 58.684 40.909 17.13 0.00 0.00 3.18
3494 4191 2.879002 TTCTTGCGGCAAAATTGACA 57.121 40.000 17.13 0.00 35.35 3.58
3495 4192 2.879002 TCTTGCGGCAAAATTGACAA 57.121 40.000 17.13 0.00 35.35 3.18
3496 4193 3.170791 TCTTGCGGCAAAATTGACAAA 57.829 38.095 17.13 0.00 35.35 2.83
3497 4194 3.726607 TCTTGCGGCAAAATTGACAAAT 58.273 36.364 17.13 0.00 35.35 2.32
3498 4195 4.125703 TCTTGCGGCAAAATTGACAAATT 58.874 34.783 17.13 0.00 35.35 1.82
3499 4196 4.574013 TCTTGCGGCAAAATTGACAAATTT 59.426 33.333 17.13 0.00 45.81 1.82
3500 4197 4.206698 TGCGGCAAAATTGACAAATTTG 57.793 36.364 19.89 19.89 43.63 2.32
3501 4198 3.873361 TGCGGCAAAATTGACAAATTTGA 59.127 34.783 25.81 7.94 43.63 2.69
3502 4199 4.210629 GCGGCAAAATTGACAAATTTGAC 58.789 39.130 25.81 23.13 43.63 3.18
3503 4200 4.771360 CGGCAAAATTGACAAATTTGACC 58.229 39.130 25.81 22.88 43.63 4.02
3504 4201 4.511082 CGGCAAAATTGACAAATTTGACCT 59.489 37.500 25.81 2.04 43.63 3.85
3505 4202 5.694006 CGGCAAAATTGACAAATTTGACCTA 59.306 36.000 25.81 12.29 43.63 3.08
3506 4203 6.368516 CGGCAAAATTGACAAATTTGACCTAT 59.631 34.615 25.81 13.80 43.63 2.57
3507 4204 7.520686 GGCAAAATTGACAAATTTGACCTATG 58.479 34.615 25.81 13.77 43.63 2.23
3508 4205 7.361116 GGCAAAATTGACAAATTTGACCTATGG 60.361 37.037 25.81 8.50 43.63 2.74
3509 4206 7.387397 GCAAAATTGACAAATTTGACCTATGGA 59.613 33.333 25.81 0.00 43.63 3.41
3510 4207 9.439500 CAAAATTGACAAATTTGACCTATGGAT 57.561 29.630 24.64 0.00 43.63 3.41
3511 4208 9.439500 AAAATTGACAAATTTGACCTATGGATG 57.561 29.630 24.64 0.00 43.63 3.51
3512 4209 7.959658 ATTGACAAATTTGACCTATGGATGA 57.040 32.000 24.64 0.00 0.00 2.92
3513 4210 7.773489 TTGACAAATTTGACCTATGGATGAA 57.227 32.000 24.64 3.11 0.00 2.57
3514 4211 7.773489 TGACAAATTTGACCTATGGATGAAA 57.227 32.000 24.64 0.00 0.00 2.69
3515 4212 8.365060 TGACAAATTTGACCTATGGATGAAAT 57.635 30.769 24.64 0.00 0.00 2.17
3516 4213 8.469200 TGACAAATTTGACCTATGGATGAAATC 58.531 33.333 24.64 6.30 44.55 2.17
3535 4232 9.745880 ATGAAATCAAATCATAGAATGAACTGC 57.254 29.630 0.00 0.00 43.50 4.40
3536 4233 8.192774 TGAAATCAAATCATAGAATGAACTGCC 58.807 33.333 0.00 0.00 43.50 4.85
3537 4234 6.645790 ATCAAATCATAGAATGAACTGCCC 57.354 37.500 0.00 0.00 43.50 5.36
3538 4235 4.576053 TCAAATCATAGAATGAACTGCCCG 59.424 41.667 0.00 0.00 43.50 6.13
3539 4236 3.845781 ATCATAGAATGAACTGCCCGT 57.154 42.857 0.00 0.00 43.50 5.28
3540 4237 2.905075 TCATAGAATGAACTGCCCGTG 58.095 47.619 0.00 0.00 36.11 4.94
3541 4238 2.499693 TCATAGAATGAACTGCCCGTGA 59.500 45.455 0.00 0.00 36.11 4.35
3542 4239 3.055458 TCATAGAATGAACTGCCCGTGAA 60.055 43.478 0.00 0.00 36.11 3.18
3543 4240 2.270352 AGAATGAACTGCCCGTGAAA 57.730 45.000 0.00 0.00 0.00 2.69
3544 4241 1.880027 AGAATGAACTGCCCGTGAAAC 59.120 47.619 0.00 0.00 0.00 2.78
3545 4242 1.880027 GAATGAACTGCCCGTGAAACT 59.120 47.619 0.00 0.00 31.75 2.66
3546 4243 2.851263 ATGAACTGCCCGTGAAACTA 57.149 45.000 0.00 0.00 31.75 2.24
3547 4244 2.851263 TGAACTGCCCGTGAAACTAT 57.149 45.000 0.00 0.00 31.75 2.12
3548 4245 3.134574 TGAACTGCCCGTGAAACTATT 57.865 42.857 0.00 0.00 31.75 1.73
3549 4246 3.071479 TGAACTGCCCGTGAAACTATTC 58.929 45.455 0.00 0.00 36.04 1.75
3550 4247 2.109425 ACTGCCCGTGAAACTATTCC 57.891 50.000 0.00 0.00 34.49 3.01
3551 4248 1.349688 ACTGCCCGTGAAACTATTCCA 59.650 47.619 0.00 0.00 34.49 3.53
3552 4249 1.737793 CTGCCCGTGAAACTATTCCAC 59.262 52.381 0.00 0.00 34.49 4.02
3553 4250 0.725117 GCCCGTGAAACTATTCCACG 59.275 55.000 0.00 0.00 38.56 4.94
3554 4251 0.725117 CCCGTGAAACTATTCCACGC 59.275 55.000 0.00 0.00 38.05 5.34
3555 4252 0.368907 CCGTGAAACTATTCCACGCG 59.631 55.000 3.53 3.53 38.05 6.01
3556 4253 0.368907 CGTGAAACTATTCCACGCGG 59.631 55.000 12.47 0.00 35.20 6.46
3557 4254 0.096454 GTGAAACTATTCCACGCGGC 59.904 55.000 12.47 0.00 34.49 6.53
3558 4255 0.036765 TGAAACTATTCCACGCGGCT 60.037 50.000 12.47 0.00 34.49 5.52
3559 4256 0.373716 GAAACTATTCCACGCGGCTG 59.626 55.000 12.47 0.00 0.00 4.85
3560 4257 0.036765 AAACTATTCCACGCGGCTGA 60.037 50.000 12.47 0.00 0.00 4.26
3561 4258 0.739813 AACTATTCCACGCGGCTGAC 60.740 55.000 12.47 0.00 0.00 3.51
3562 4259 1.883084 CTATTCCACGCGGCTGACC 60.883 63.158 12.47 0.00 0.00 4.02
3563 4260 2.298158 CTATTCCACGCGGCTGACCT 62.298 60.000 12.47 0.00 0.00 3.85
3564 4261 1.895020 TATTCCACGCGGCTGACCTT 61.895 55.000 12.47 0.00 0.00 3.50
3565 4262 2.748058 ATTCCACGCGGCTGACCTTT 62.748 55.000 12.47 0.00 0.00 3.11
3566 4263 2.951475 TTCCACGCGGCTGACCTTTT 62.951 55.000 12.47 0.00 0.00 2.27
3567 4264 2.551912 CCACGCGGCTGACCTTTTT 61.552 57.895 12.47 0.00 0.00 1.94
3568 4265 1.370414 CACGCGGCTGACCTTTTTG 60.370 57.895 12.47 0.00 0.00 2.44
3569 4266 1.822186 ACGCGGCTGACCTTTTTGT 60.822 52.632 12.47 0.00 0.00 2.83
3570 4267 1.370414 CGCGGCTGACCTTTTTGTG 60.370 57.895 0.00 0.00 0.00 3.33
3571 4268 1.733526 GCGGCTGACCTTTTTGTGT 59.266 52.632 0.00 0.00 0.00 3.72
3572 4269 0.594796 GCGGCTGACCTTTTTGTGTG 60.595 55.000 0.00 0.00 0.00 3.82
3573 4270 1.021202 CGGCTGACCTTTTTGTGTGA 58.979 50.000 0.00 0.00 0.00 3.58
3574 4271 1.268539 CGGCTGACCTTTTTGTGTGAC 60.269 52.381 0.00 0.00 0.00 3.67
3575 4272 1.268539 GGCTGACCTTTTTGTGTGACG 60.269 52.381 0.00 0.00 0.00 4.35
3576 4273 1.859998 GCTGACCTTTTTGTGTGACGC 60.860 52.381 0.00 0.00 0.00 5.19
3577 4274 1.670811 CTGACCTTTTTGTGTGACGCT 59.329 47.619 0.00 0.00 0.00 5.07
3578 4275 1.668751 TGACCTTTTTGTGTGACGCTC 59.331 47.619 0.00 0.00 0.00 5.03
3579 4276 0.655733 ACCTTTTTGTGTGACGCTCG 59.344 50.000 0.00 0.00 0.00 5.03
3580 4277 0.934496 CCTTTTTGTGTGACGCTCGA 59.066 50.000 0.00 0.00 0.00 4.04
3581 4278 1.332904 CCTTTTTGTGTGACGCTCGAC 60.333 52.381 0.00 0.00 0.00 4.20
3582 4279 1.326245 CTTTTTGTGTGACGCTCGACA 59.674 47.619 0.00 0.00 0.00 4.35
3583 4280 0.648441 TTTTGTGTGACGCTCGACAC 59.352 50.000 15.58 15.58 42.40 3.67
3584 4281 1.476235 TTTGTGTGACGCTCGACACG 61.476 55.000 16.82 1.72 44.55 4.49
3585 4282 2.051614 GTGTGACGCTCGACACGA 60.052 61.111 16.82 6.64 42.06 4.35
3586 4283 1.656263 GTGTGACGCTCGACACGAA 60.656 57.895 16.82 1.73 42.06 3.85
3587 4284 1.370051 TGTGACGCTCGACACGAAG 60.370 57.895 16.82 0.00 42.06 3.79
3588 4285 1.082300 GTGACGCTCGACACGAAGA 60.082 57.895 9.87 0.00 34.74 2.87
3589 4286 1.082300 TGACGCTCGACACGAAGAC 60.082 57.895 9.87 0.00 34.74 3.01
3590 4287 2.127345 ACGCTCGACACGAAGACG 60.127 61.111 9.87 0.00 45.75 4.18
3591 4288 3.524759 CGCTCGACACGAAGACGC 61.525 66.667 0.00 0.00 43.96 5.19
3592 4289 3.173240 GCTCGACACGAAGACGCC 61.173 66.667 0.00 0.00 43.96 5.68
3593 4290 2.254350 CTCGACACGAAGACGCCA 59.746 61.111 0.00 0.00 43.96 5.69
3594 4291 2.050714 TCGACACGAAGACGCCAC 60.051 61.111 0.00 0.00 43.96 5.01
3595 4292 2.354188 CGACACGAAGACGCCACA 60.354 61.111 0.00 0.00 43.96 4.17
3596 4293 2.645510 CGACACGAAGACGCCACAC 61.646 63.158 0.00 0.00 43.96 3.82
3597 4294 1.299926 GACACGAAGACGCCACACT 60.300 57.895 0.00 0.00 43.96 3.55
3598 4295 0.039798 GACACGAAGACGCCACACTA 60.040 55.000 0.00 0.00 43.96 2.74
3599 4296 0.318445 ACACGAAGACGCCACACTAC 60.318 55.000 0.00 0.00 43.96 2.73
3600 4297 0.318360 CACGAAGACGCCACACTACA 60.318 55.000 0.00 0.00 43.96 2.74
3601 4298 0.601558 ACGAAGACGCCACACTACAT 59.398 50.000 0.00 0.00 43.96 2.29
3602 4299 1.000506 ACGAAGACGCCACACTACATT 59.999 47.619 0.00 0.00 43.96 2.71
3603 4300 1.390123 CGAAGACGCCACACTACATTG 59.610 52.381 0.00 0.00 0.00 2.82
3604 4301 2.413837 GAAGACGCCACACTACATTGT 58.586 47.619 0.00 0.00 0.00 2.71
3605 4302 1.795768 AGACGCCACACTACATTGTG 58.204 50.000 0.00 0.00 45.57 3.33
3606 4303 0.165944 GACGCCACACTACATTGTGC 59.834 55.000 0.00 0.00 44.79 4.57
3607 4304 0.533978 ACGCCACACTACATTGTGCA 60.534 50.000 0.00 0.00 44.79 4.57
3608 4305 0.590682 CGCCACACTACATTGTGCAA 59.409 50.000 0.00 0.00 44.79 4.08
3609 4306 1.662876 CGCCACACTACATTGTGCAAC 60.663 52.381 0.00 0.00 44.79 4.17
3610 4307 1.662876 GCCACACTACATTGTGCAACG 60.663 52.381 0.00 0.00 44.79 4.10
3611 4308 1.662876 CCACACTACATTGTGCAACGC 60.663 52.381 0.00 0.00 44.79 4.84
3612 4309 0.591170 ACACTACATTGTGCAACGCC 59.409 50.000 0.00 0.00 42.39 5.68
3613 4310 0.874390 CACTACATTGTGCAACGCCT 59.126 50.000 0.00 0.00 42.39 5.52
3614 4311 1.135972 CACTACATTGTGCAACGCCTC 60.136 52.381 0.00 0.00 42.39 4.70
3615 4312 1.155889 CTACATTGTGCAACGCCTCA 58.844 50.000 0.00 0.00 42.39 3.86
3616 4313 0.871722 TACATTGTGCAACGCCTCAC 59.128 50.000 0.00 0.00 42.39 3.51
3617 4314 1.100463 ACATTGTGCAACGCCTCACA 61.100 50.000 0.00 0.86 42.39 3.58
3618 4315 0.386352 CATTGTGCAACGCCTCACAG 60.386 55.000 0.00 0.00 43.15 3.66
3619 4316 0.534877 ATTGTGCAACGCCTCACAGA 60.535 50.000 0.00 0.00 43.15 3.41
3620 4317 0.534877 TTGTGCAACGCCTCACAGAT 60.535 50.000 0.00 0.00 43.15 2.90
3621 4318 0.320050 TGTGCAACGCCTCACAGATA 59.680 50.000 0.00 0.00 42.39 1.98
3622 4319 1.002366 GTGCAACGCCTCACAGATAG 58.998 55.000 0.00 0.00 33.63 2.08
3623 4320 0.108186 TGCAACGCCTCACAGATAGG 60.108 55.000 0.00 0.00 37.17 2.57
3629 4326 3.875838 CCTCACAGATAGGCGCTAC 57.124 57.895 7.64 0.00 0.00 3.58
3630 4327 1.032794 CCTCACAGATAGGCGCTACA 58.967 55.000 7.64 0.00 0.00 2.74
3631 4328 1.269309 CCTCACAGATAGGCGCTACAC 60.269 57.143 7.64 0.00 0.00 2.90
3641 4338 2.278857 CGCTACACGCCTAGCCAG 60.279 66.667 6.41 0.00 36.53 4.85
3642 4339 2.586357 GCTACACGCCTAGCCAGC 60.586 66.667 1.26 0.00 34.16 4.85
3649 4346 2.278661 GCCTAGCCAGCGTCGTAC 60.279 66.667 0.00 0.00 0.00 3.67
3650 4347 2.412112 CCTAGCCAGCGTCGTACC 59.588 66.667 0.00 0.00 0.00 3.34
3651 4348 2.412112 CTAGCCAGCGTCGTACCC 59.588 66.667 0.00 0.00 0.00 3.69
3652 4349 2.361483 TAGCCAGCGTCGTACCCA 60.361 61.111 0.00 0.00 0.00 4.51
3653 4350 1.735376 CTAGCCAGCGTCGTACCCAT 61.735 60.000 0.00 0.00 0.00 4.00
3654 4351 2.011741 TAGCCAGCGTCGTACCCATG 62.012 60.000 0.00 0.00 0.00 3.66
3655 4352 2.577059 CCAGCGTCGTACCCATGT 59.423 61.111 0.00 0.00 0.00 3.21
3656 4353 1.809619 CCAGCGTCGTACCCATGTG 60.810 63.158 0.00 0.00 0.00 3.21
3657 4354 1.214325 CAGCGTCGTACCCATGTGA 59.786 57.895 0.00 0.00 0.00 3.58
3658 4355 0.179111 CAGCGTCGTACCCATGTGAT 60.179 55.000 0.00 0.00 0.00 3.06
3659 4356 0.102481 AGCGTCGTACCCATGTGATC 59.898 55.000 0.00 0.00 0.00 2.92
3660 4357 0.874607 GCGTCGTACCCATGTGATCC 60.875 60.000 0.00 0.00 0.00 3.36
3661 4358 0.594028 CGTCGTACCCATGTGATCCG 60.594 60.000 0.00 0.00 0.00 4.18
3662 4359 0.742505 GTCGTACCCATGTGATCCGA 59.257 55.000 0.00 0.00 0.00 4.55
3663 4360 1.135527 GTCGTACCCATGTGATCCGAA 59.864 52.381 0.00 0.00 0.00 4.30
3664 4361 1.826096 TCGTACCCATGTGATCCGAAA 59.174 47.619 0.00 0.00 0.00 3.46
3665 4362 2.234168 TCGTACCCATGTGATCCGAAAA 59.766 45.455 0.00 0.00 0.00 2.29
3666 4363 3.118555 TCGTACCCATGTGATCCGAAAAT 60.119 43.478 0.00 0.00 0.00 1.82
3667 4364 3.625764 CGTACCCATGTGATCCGAAAATT 59.374 43.478 0.00 0.00 0.00 1.82
3668 4365 4.812091 CGTACCCATGTGATCCGAAAATTA 59.188 41.667 0.00 0.00 0.00 1.40
3669 4366 5.277154 CGTACCCATGTGATCCGAAAATTAC 60.277 44.000 0.00 0.00 0.00 1.89
3670 4367 4.855340 ACCCATGTGATCCGAAAATTACT 58.145 39.130 0.00 0.00 0.00 2.24
3671 4368 5.996644 ACCCATGTGATCCGAAAATTACTA 58.003 37.500 0.00 0.00 0.00 1.82
3672 4369 6.419791 ACCCATGTGATCCGAAAATTACTAA 58.580 36.000 0.00 0.00 0.00 2.24
3673 4370 6.542370 ACCCATGTGATCCGAAAATTACTAAG 59.458 38.462 0.00 0.00 0.00 2.18
3674 4371 6.542370 CCCATGTGATCCGAAAATTACTAAGT 59.458 38.462 0.00 0.00 0.00 2.24
3675 4372 7.254795 CCCATGTGATCCGAAAATTACTAAGTC 60.255 40.741 0.00 0.00 0.00 3.01
3676 4373 7.279981 CCATGTGATCCGAAAATTACTAAGTCA 59.720 37.037 0.00 0.00 0.00 3.41
3677 4374 7.827819 TGTGATCCGAAAATTACTAAGTCAG 57.172 36.000 0.00 0.00 0.00 3.51
3678 4375 7.383687 TGTGATCCGAAAATTACTAAGTCAGT 58.616 34.615 0.00 0.00 41.62 3.41
3679 4376 7.330946 TGTGATCCGAAAATTACTAAGTCAGTG 59.669 37.037 0.00 0.00 38.24 3.66
3680 4377 7.331193 GTGATCCGAAAATTACTAAGTCAGTGT 59.669 37.037 0.00 0.00 38.24 3.55
3681 4378 7.330946 TGATCCGAAAATTACTAAGTCAGTGTG 59.669 37.037 0.00 0.00 38.24 3.82
3682 4379 5.407387 TCCGAAAATTACTAAGTCAGTGTGC 59.593 40.000 0.00 0.00 38.24 4.57
3683 4380 5.178623 CCGAAAATTACTAAGTCAGTGTGCA 59.821 40.000 0.00 0.00 38.24 4.57
3684 4381 6.293190 CCGAAAATTACTAAGTCAGTGTGCAA 60.293 38.462 0.00 0.00 38.24 4.08
3685 4382 6.573725 CGAAAATTACTAAGTCAGTGTGCAAC 59.426 38.462 0.00 0.00 38.24 4.17
3686 4383 5.591643 AATTACTAAGTCAGTGTGCAACG 57.408 39.130 0.00 0.00 42.39 4.10
3694 4391 2.546321 GTGTGCAACGCGTGAGAG 59.454 61.111 14.98 4.51 42.39 3.20
3701 4398 3.362262 ACGCGTGAGAGTTAGGCA 58.638 55.556 12.93 0.00 43.23 4.75
3702 4399 1.080705 ACGCGTGAGAGTTAGGCAC 60.081 57.895 12.93 0.00 43.23 5.01
3703 4400 1.805945 CGCGTGAGAGTTAGGCACC 60.806 63.158 0.00 0.00 0.00 5.01
3704 4401 1.292223 GCGTGAGAGTTAGGCACCA 59.708 57.895 0.00 0.00 0.00 4.17
3705 4402 0.108138 GCGTGAGAGTTAGGCACCAT 60.108 55.000 0.00 0.00 0.00 3.55
3706 4403 1.136305 GCGTGAGAGTTAGGCACCATA 59.864 52.381 0.00 0.00 0.00 2.74
3707 4404 2.224066 GCGTGAGAGTTAGGCACCATAT 60.224 50.000 0.00 0.00 0.00 1.78
3708 4405 3.741388 GCGTGAGAGTTAGGCACCATATT 60.741 47.826 0.00 0.00 0.00 1.28
3709 4406 4.500887 GCGTGAGAGTTAGGCACCATATTA 60.501 45.833 0.00 0.00 0.00 0.98
3710 4407 5.784177 CGTGAGAGTTAGGCACCATATTAT 58.216 41.667 0.00 0.00 0.00 1.28
3711 4408 6.571731 GCGTGAGAGTTAGGCACCATATTATA 60.572 42.308 0.00 0.00 0.00 0.98
3712 4409 6.807230 CGTGAGAGTTAGGCACCATATTATAC 59.193 42.308 0.00 0.00 0.00 1.47
3713 4410 7.523216 CGTGAGAGTTAGGCACCATATTATACA 60.523 40.741 0.00 0.00 0.00 2.29
3714 4411 7.815068 GTGAGAGTTAGGCACCATATTATACAG 59.185 40.741 0.00 0.00 0.00 2.74
3715 4412 7.509318 TGAGAGTTAGGCACCATATTATACAGT 59.491 37.037 0.00 0.00 0.00 3.55
3716 4413 7.671302 AGAGTTAGGCACCATATTATACAGTG 58.329 38.462 0.00 0.00 0.00 3.66
3717 4414 7.290248 AGAGTTAGGCACCATATTATACAGTGT 59.710 37.037 0.00 0.00 0.00 3.55
3718 4415 8.486942 AGTTAGGCACCATATTATACAGTGTA 57.513 34.615 5.24 5.24 0.00 2.90
3719 4416 8.585881 AGTTAGGCACCATATTATACAGTGTAG 58.414 37.037 9.25 0.00 0.00 2.74
3720 4417 5.794894 AGGCACCATATTATACAGTGTAGC 58.205 41.667 9.25 3.25 0.00 3.58
3721 4418 4.625742 GGCACCATATTATACAGTGTAGCG 59.374 45.833 9.25 0.00 0.00 4.26
3722 4419 5.227908 GCACCATATTATACAGTGTAGCGT 58.772 41.667 9.25 0.00 0.00 5.07
3723 4420 5.345202 GCACCATATTATACAGTGTAGCGTC 59.655 44.000 9.25 0.00 0.00 5.19
3724 4421 6.678878 CACCATATTATACAGTGTAGCGTCT 58.321 40.000 9.25 0.00 0.00 4.18
3725 4422 7.574404 GCACCATATTATACAGTGTAGCGTCTA 60.574 40.741 9.25 0.00 0.00 2.59
3726 4423 7.963465 CACCATATTATACAGTGTAGCGTCTAG 59.037 40.741 9.25 0.00 0.00 2.43
3736 4433 4.618513 GCGTCTAGCTTCTAGGCG 57.381 61.111 19.76 19.76 44.54 5.52
3737 4434 1.728672 GCGTCTAGCTTCTAGGCGT 59.271 57.895 23.18 0.00 43.72 5.68
3738 4435 0.100861 GCGTCTAGCTTCTAGGCGTT 59.899 55.000 23.18 0.00 43.72 4.84
3739 4436 1.828832 CGTCTAGCTTCTAGGCGTTG 58.171 55.000 16.86 0.00 37.81 4.10
3740 4437 1.562017 GTCTAGCTTCTAGGCGTTGC 58.438 55.000 0.00 0.00 37.29 4.17
3741 4438 1.135083 GTCTAGCTTCTAGGCGTTGCA 60.135 52.381 0.00 0.00 37.29 4.08
3742 4439 1.135083 TCTAGCTTCTAGGCGTTGCAC 60.135 52.381 0.00 0.00 37.29 4.57
3743 4440 0.895530 TAGCTTCTAGGCGTTGCACT 59.104 50.000 0.00 0.00 37.29 4.40
3744 4441 0.895530 AGCTTCTAGGCGTTGCACTA 59.104 50.000 0.00 0.00 37.29 2.74
3745 4442 1.134965 AGCTTCTAGGCGTTGCACTAG 60.135 52.381 3.29 3.29 38.38 2.57
3746 4443 1.404315 GCTTCTAGGCGTTGCACTAGT 60.404 52.381 8.47 0.00 38.24 2.57
3747 4444 2.263077 CTTCTAGGCGTTGCACTAGTG 58.737 52.381 18.93 18.93 38.24 2.74
3748 4445 0.530744 TCTAGGCGTTGCACTAGTGG 59.469 55.000 23.95 8.63 38.24 4.00
3749 4446 0.246635 CTAGGCGTTGCACTAGTGGT 59.753 55.000 23.95 0.00 33.63 4.16
3750 4447 0.682852 TAGGCGTTGCACTAGTGGTT 59.317 50.000 23.95 3.73 0.00 3.67
3751 4448 0.884704 AGGCGTTGCACTAGTGGTTG 60.885 55.000 23.95 0.00 0.00 3.77
3752 4449 1.082104 GCGTTGCACTAGTGGTTGC 60.082 57.895 23.95 10.41 0.00 4.17
3753 4450 1.507141 GCGTTGCACTAGTGGTTGCT 61.507 55.000 23.95 0.00 0.00 3.91
3754 4451 0.944386 CGTTGCACTAGTGGTTGCTT 59.056 50.000 23.95 0.00 0.00 3.91
3755 4452 1.069906 CGTTGCACTAGTGGTTGCTTC 60.070 52.381 23.95 6.25 0.00 3.86
3756 4453 1.946768 GTTGCACTAGTGGTTGCTTCA 59.053 47.619 23.95 8.83 0.00 3.02
3757 4454 2.554032 GTTGCACTAGTGGTTGCTTCAT 59.446 45.455 23.95 0.00 0.00 2.57
3758 4455 2.862541 TGCACTAGTGGTTGCTTCATT 58.137 42.857 23.95 0.00 0.00 2.57
3759 4456 3.221771 TGCACTAGTGGTTGCTTCATTT 58.778 40.909 23.95 0.00 0.00 2.32
3760 4457 3.636300 TGCACTAGTGGTTGCTTCATTTT 59.364 39.130 23.95 0.00 0.00 1.82
3761 4458 3.983344 GCACTAGTGGTTGCTTCATTTTG 59.017 43.478 23.95 0.00 0.00 2.44
3762 4459 4.499696 GCACTAGTGGTTGCTTCATTTTGT 60.500 41.667 23.95 0.00 0.00 2.83
3763 4460 5.278266 GCACTAGTGGTTGCTTCATTTTGTA 60.278 40.000 23.95 0.00 0.00 2.41
3764 4461 6.373779 CACTAGTGGTTGCTTCATTTTGTAG 58.626 40.000 15.49 0.00 0.00 2.74
3765 4462 6.017109 CACTAGTGGTTGCTTCATTTTGTAGT 60.017 38.462 15.49 0.00 0.00 2.73
3766 4463 5.186996 AGTGGTTGCTTCATTTTGTAGTG 57.813 39.130 0.00 0.00 0.00 2.74
3767 4464 3.735746 GTGGTTGCTTCATTTTGTAGTGC 59.264 43.478 0.00 0.00 0.00 4.40
3768 4465 3.382865 TGGTTGCTTCATTTTGTAGTGCA 59.617 39.130 0.00 0.00 0.00 4.57
3769 4466 4.142071 TGGTTGCTTCATTTTGTAGTGCAA 60.142 37.500 0.00 0.00 36.74 4.08
3771 4468 3.976169 TGCTTCATTTTGTAGTGCAACC 58.024 40.909 0.00 0.00 37.80 3.77
3772 4469 3.382865 TGCTTCATTTTGTAGTGCAACCA 59.617 39.130 0.00 0.00 37.80 3.67
3773 4470 3.735746 GCTTCATTTTGTAGTGCAACCAC 59.264 43.478 0.00 0.00 42.39 4.16
3782 4479 1.576421 GTGCAACCACTAGTGCAGC 59.424 57.895 17.86 18.77 38.93 5.25
3783 4480 1.960763 TGCAACCACTAGTGCAGCG 60.961 57.895 17.86 6.34 31.61 5.18
3784 4481 2.863153 CAACCACTAGTGCAGCGC 59.137 61.111 17.86 0.00 0.00 5.92
3785 4482 2.358737 AACCACTAGTGCAGCGCC 60.359 61.111 17.86 0.00 0.00 6.53
3786 4483 2.883828 AACCACTAGTGCAGCGCCT 61.884 57.895 17.86 0.00 0.00 5.52
3787 4484 2.816958 CCACTAGTGCAGCGCCTG 60.817 66.667 17.86 2.69 34.12 4.85
3788 4485 2.262603 CACTAGTGCAGCGCCTGA 59.737 61.111 10.54 0.00 32.44 3.86
3789 4486 1.808799 CACTAGTGCAGCGCCTGAG 60.809 63.158 10.54 0.34 32.44 3.35
3790 4487 1.979155 ACTAGTGCAGCGCCTGAGA 60.979 57.895 2.29 0.00 32.44 3.27
3791 4488 1.226916 CTAGTGCAGCGCCTGAGAG 60.227 63.158 2.29 0.00 32.44 3.20
3792 4489 3.362399 TAGTGCAGCGCCTGAGAGC 62.362 63.158 2.29 0.00 39.42 4.09
3801 4498 4.277593 CCTGAGAGCTAGGCGCCG 62.278 72.222 23.20 9.22 40.39 6.46
3802 4499 4.940593 CTGAGAGCTAGGCGCCGC 62.941 72.222 23.20 20.04 40.39 6.53
3806 4503 3.900892 GAGCTAGGCGCCGCACTA 61.901 66.667 25.28 10.70 40.39 2.74
3807 4504 3.214250 GAGCTAGGCGCCGCACTAT 62.214 63.158 25.28 8.92 40.39 2.12
3808 4505 1.863662 GAGCTAGGCGCCGCACTATA 61.864 60.000 25.28 9.62 40.39 1.31
3809 4506 1.733399 GCTAGGCGCCGCACTATAC 60.733 63.158 23.20 1.93 0.00 1.47
3810 4507 1.658114 CTAGGCGCCGCACTATACA 59.342 57.895 23.20 0.00 0.00 2.29
3811 4508 0.387367 CTAGGCGCCGCACTATACAG 60.387 60.000 23.20 4.35 0.00 2.74
3812 4509 1.105167 TAGGCGCCGCACTATACAGT 61.105 55.000 23.20 0.33 34.42 3.55
3820 4517 2.301505 CACTATACAGTGCAGCGCC 58.698 57.895 2.29 0.00 45.44 6.53
3821 4518 0.179100 CACTATACAGTGCAGCGCCT 60.179 55.000 2.29 0.00 45.44 5.52
3822 4519 1.067060 CACTATACAGTGCAGCGCCTA 59.933 52.381 2.29 0.00 45.44 3.93
3823 4520 1.338337 ACTATACAGTGCAGCGCCTAG 59.662 52.381 2.29 0.00 32.25 3.02
3824 4521 4.475312 ACTATACAGTGCAGCGCCTAGC 62.475 54.545 2.29 7.01 38.99 3.42
3838 4535 1.407936 CCTAGCTCTTAGGCTCTGCA 58.592 55.000 0.00 0.00 42.50 4.41
3839 4536 1.068434 CCTAGCTCTTAGGCTCTGCAC 59.932 57.143 0.00 0.00 42.50 4.57
3840 4537 1.753649 CTAGCTCTTAGGCTCTGCACA 59.246 52.381 0.00 0.00 42.97 4.57
3841 4538 0.979665 AGCTCTTAGGCTCTGCACAA 59.020 50.000 0.00 0.00 38.24 3.33
3842 4539 1.558756 AGCTCTTAGGCTCTGCACAAT 59.441 47.619 0.00 0.00 38.24 2.71
3843 4540 1.669779 GCTCTTAGGCTCTGCACAATG 59.330 52.381 0.00 0.00 0.00 2.82
3844 4541 2.679059 GCTCTTAGGCTCTGCACAATGA 60.679 50.000 0.00 0.00 0.00 2.57
3845 4542 2.935201 CTCTTAGGCTCTGCACAATGAC 59.065 50.000 0.00 0.00 0.00 3.06
3846 4543 2.568956 TCTTAGGCTCTGCACAATGACT 59.431 45.455 0.00 0.00 0.00 3.41
3847 4544 3.008375 TCTTAGGCTCTGCACAATGACTT 59.992 43.478 0.00 0.00 0.00 3.01
3848 4545 4.222810 TCTTAGGCTCTGCACAATGACTTA 59.777 41.667 0.00 0.00 0.00 2.24
3849 4546 2.983229 AGGCTCTGCACAATGACTTAG 58.017 47.619 0.00 0.00 0.00 2.18
3850 4547 1.399791 GGCTCTGCACAATGACTTAGC 59.600 52.381 0.00 0.00 0.00 3.09
3851 4548 2.079158 GCTCTGCACAATGACTTAGCA 58.921 47.619 0.00 0.00 0.00 3.49
3852 4549 2.485426 GCTCTGCACAATGACTTAGCAA 59.515 45.455 0.00 0.00 34.45 3.91
3853 4550 3.128242 GCTCTGCACAATGACTTAGCAAT 59.872 43.478 0.00 0.00 34.45 3.56
3854 4551 4.380233 GCTCTGCACAATGACTTAGCAATT 60.380 41.667 0.00 0.00 34.45 2.32
3855 4552 5.706916 CTCTGCACAATGACTTAGCAATTT 58.293 37.500 0.00 0.00 34.45 1.82
3856 4553 6.088016 TCTGCACAATGACTTAGCAATTTT 57.912 33.333 0.00 0.00 34.45 1.82
3857 4554 6.514947 TCTGCACAATGACTTAGCAATTTTT 58.485 32.000 0.00 0.00 34.45 1.94
3858 4555 7.656412 TCTGCACAATGACTTAGCAATTTTTA 58.344 30.769 0.00 0.00 34.45 1.52
3859 4556 7.809331 TCTGCACAATGACTTAGCAATTTTTAG 59.191 33.333 0.00 0.00 34.45 1.85
3860 4557 6.867816 TGCACAATGACTTAGCAATTTTTAGG 59.132 34.615 0.00 0.00 31.42 2.69
3861 4558 6.183360 GCACAATGACTTAGCAATTTTTAGGC 60.183 38.462 0.00 0.00 0.00 3.93
3862 4559 6.867816 CACAATGACTTAGCAATTTTTAGGCA 59.132 34.615 0.00 0.00 0.00 4.75
3863 4560 6.868339 ACAATGACTTAGCAATTTTTAGGCAC 59.132 34.615 0.00 0.00 0.00 5.01
3864 4561 6.840780 ATGACTTAGCAATTTTTAGGCACT 57.159 33.333 0.00 0.00 46.37 4.40
3865 4562 6.254281 TGACTTAGCAATTTTTAGGCACTC 57.746 37.500 0.00 0.00 41.75 3.51
3866 4563 6.003950 TGACTTAGCAATTTTTAGGCACTCT 58.996 36.000 0.00 0.00 41.75 3.24
3867 4564 6.072508 TGACTTAGCAATTTTTAGGCACTCTG 60.073 38.462 0.00 0.00 41.75 3.35
3868 4565 5.183904 ACTTAGCAATTTTTAGGCACTCTGG 59.816 40.000 0.00 0.00 41.75 3.86
3869 4566 2.827921 AGCAATTTTTAGGCACTCTGGG 59.172 45.455 0.00 0.00 41.75 4.45
3870 4567 2.094026 GCAATTTTTAGGCACTCTGGGG 60.094 50.000 0.00 0.00 41.75 4.96
3871 4568 3.165071 CAATTTTTAGGCACTCTGGGGT 58.835 45.455 0.00 0.00 41.75 4.95
3872 4569 2.286365 TTTTTAGGCACTCTGGGGTG 57.714 50.000 0.00 0.00 41.75 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 7.485418 AAACAGACGTGTCAACAATAACATA 57.515 32.000 0.00 0.00 35.08 2.29
55 56 1.004292 GCGCTACAAAAACAGACGTGT 60.004 47.619 0.00 0.00 39.19 4.49
106 107 3.197116 ACGGTGGTATCTTTAGGAGTTGG 59.803 47.826 0.00 0.00 0.00 3.77
188 191 1.202687 GCAGCTGCCATGTATCCTACA 60.203 52.381 28.76 0.00 37.89 2.74
204 207 0.036388 TACAAGCACACTAGGGCAGC 60.036 55.000 1.92 1.92 0.00 5.25
236 240 2.027469 ACATGTCCGGGGTAAAAGAGAC 60.027 50.000 0.00 0.00 0.00 3.36
295 303 3.689649 GGAGTTGCCACCTACTAACATTG 59.310 47.826 0.00 0.00 36.34 2.82
297 305 3.182152 AGGAGTTGCCACCTACTAACAT 58.818 45.455 0.00 0.00 40.02 2.71
336 345 4.108501 TGGTCTGGTCTACTACAGTTGA 57.891 45.455 0.00 0.00 36.17 3.18
497 506 2.884639 GTGTAACTCCAGTTGCCATGTT 59.115 45.455 2.01 0.00 39.42 2.71
555 567 2.807895 CAGTAACCACGCGTCCCG 60.808 66.667 9.86 1.63 44.21 5.14
556 568 3.116531 GCAGTAACCACGCGTCCC 61.117 66.667 9.86 0.00 0.00 4.46
557 569 3.116531 GGCAGTAACCACGCGTCC 61.117 66.667 9.86 0.00 0.00 4.79
729 741 2.573869 CATCGACACAGACCCGCT 59.426 61.111 0.00 0.00 0.00 5.52
750 762 2.473816 GTATCTGCTGCATGCTTCGTA 58.526 47.619 20.33 6.07 43.37 3.43
758 770 2.405618 TCTAGGGGTATCTGCTGCAT 57.594 50.000 1.31 0.00 0.00 3.96
762 774 4.161102 GTTGGTATCTAGGGGTATCTGCT 58.839 47.826 0.00 0.00 0.00 4.24
1428 1451 0.250513 AGGAAACAGCCTCCACGATC 59.749 55.000 0.00 0.00 35.20 3.69
1711 1734 2.488820 GGAGTGGTACTCGCCGAC 59.511 66.667 3.17 0.00 45.96 4.79
1881 1904 0.453793 CGCCAACAACAAACACCTGA 59.546 50.000 0.00 0.00 0.00 3.86
1923 1946 2.637383 GGACTCGGAAGCGACCACT 61.637 63.158 0.00 0.00 0.00 4.00
1935 1958 2.517450 GCGGCTGAAATCGGACTCG 61.517 63.158 0.00 0.00 37.82 4.18
1968 1991 1.153369 CTCACCACCGCCCATGTAG 60.153 63.158 0.00 0.00 0.00 2.74
2022 2045 1.016130 CCTCACCTAGCGCACACAAG 61.016 60.000 11.47 0.00 0.00 3.16
2055 2078 2.762535 AGTCCATAACAAGTGTCCGG 57.237 50.000 0.00 0.00 0.00 5.14
2580 2603 3.945346 AGCAATGTACAAATACCGTCCA 58.055 40.909 0.00 0.00 0.00 4.02
2682 2705 7.522725 GCATACCATTCACTATTTTCATCCCAG 60.523 40.741 0.00 0.00 0.00 4.45
2715 2738 1.999648 TGCCATTGTTGAGCTCCTTT 58.000 45.000 12.15 0.00 0.00 3.11
2824 2847 0.249531 TCCTTGCAGTCGCGTGTTAA 60.250 50.000 5.77 0.00 42.97 2.01
2878 2901 3.455910 TCATCCCACCTTACTCAATCAGG 59.544 47.826 0.00 0.00 0.00 3.86
2882 2905 4.366267 AGACTCATCCCACCTTACTCAAT 58.634 43.478 0.00 0.00 0.00 2.57
2895 2918 9.995003 ATCAAGAATAATAACTGAGACTCATCC 57.005 33.333 5.42 0.00 0.00 3.51
3030 3053 1.472480 GTGTAATCTGGGCGCACAAAT 59.528 47.619 16.01 1.71 0.00 2.32
3062 3085 0.106419 AAAGTTCCCCGTGGCTGAAA 60.106 50.000 0.00 0.00 0.00 2.69
3069 3092 2.227194 AGCAAACTAAAGTTCCCCGTG 58.773 47.619 0.00 0.00 37.25 4.94
3073 3096 7.878036 TGTAACATAAGCAAACTAAAGTTCCC 58.122 34.615 0.00 0.00 37.25 3.97
3131 3160 8.467402 AATTTCTGAGTTACAACAGAGATACG 57.533 34.615 12.64 0.00 42.72 3.06
3223 3252 7.736447 ACTCTTAAACTGAACCAAATCTCAG 57.264 36.000 0.00 0.00 43.90 3.35
3252 3281 4.985409 GCAGTAGTAATATTCAGCGCTCTT 59.015 41.667 7.13 0.00 0.00 2.85
3264 3293 8.755028 TCATTTCAGTTACTGGCAGTAGTAATA 58.245 33.333 25.00 9.49 43.00 0.98
3283 3312 3.006940 GCACTGACCGGTATTCATTTCA 58.993 45.455 7.34 0.00 0.00 2.69
3284 3313 3.006940 TGCACTGACCGGTATTCATTTC 58.993 45.455 7.34 0.00 0.00 2.17
3285 3314 2.747446 GTGCACTGACCGGTATTCATTT 59.253 45.455 7.34 0.00 0.00 2.32
3286 3315 2.290008 TGTGCACTGACCGGTATTCATT 60.290 45.455 19.41 0.00 0.00 2.57
3287 3316 1.277842 TGTGCACTGACCGGTATTCAT 59.722 47.619 19.41 0.00 0.00 2.57
3323 3352 1.486726 CTCTGATAAACGCCTTCCCCT 59.513 52.381 0.00 0.00 0.00 4.79
3335 3364 6.978659 CGCAACAAAGGTATCTACTCTGATAA 59.021 38.462 0.00 0.00 31.61 1.75
3340 3369 4.021368 ACACGCAACAAAGGTATCTACTCT 60.021 41.667 0.00 0.00 0.00 3.24
3343 3372 3.424433 GCACACGCAACAAAGGTATCTAC 60.424 47.826 0.00 0.00 38.36 2.59
3392 4089 5.565592 TGATTTGGCACATCACAACTATC 57.434 39.130 12.11 0.00 39.30 2.08
3406 4103 3.123050 ACGAAGTGCTTTTTGATTTGGC 58.877 40.909 0.00 0.00 42.51 4.52
3438 4135 5.064198 TGTTCTAATTTCCGCAAATCCTACG 59.936 40.000 0.00 0.00 30.37 3.51
3456 4153 8.768019 CGCAAGAATGATGATATCTTTGTTCTA 58.232 33.333 3.98 0.00 43.02 2.10
3457 4154 7.255035 CCGCAAGAATGATGATATCTTTGTTCT 60.255 37.037 3.98 8.45 43.02 3.01
3458 4155 6.854892 CCGCAAGAATGATGATATCTTTGTTC 59.145 38.462 3.98 6.56 43.02 3.18
3459 4156 6.732154 CCGCAAGAATGATGATATCTTTGTT 58.268 36.000 3.98 0.00 43.02 2.83
3460 4157 5.278169 GCCGCAAGAATGATGATATCTTTGT 60.278 40.000 3.98 0.00 43.02 2.83
3461 4158 5.152097 GCCGCAAGAATGATGATATCTTTG 58.848 41.667 3.98 0.00 43.02 2.77
3462 4159 4.823442 TGCCGCAAGAATGATGATATCTTT 59.177 37.500 3.98 0.00 43.02 2.52
3463 4160 4.392047 TGCCGCAAGAATGATGATATCTT 58.608 39.130 3.98 0.00 43.02 2.40
3464 4161 4.011966 TGCCGCAAGAATGATGATATCT 57.988 40.909 3.98 0.00 43.02 1.98
3465 4162 4.754372 TTGCCGCAAGAATGATGATATC 57.246 40.909 0.38 0.00 43.02 1.63
3466 4163 5.518848 TTTTGCCGCAAGAATGATGATAT 57.481 34.783 5.83 0.00 43.02 1.63
3467 4164 4.979943 TTTTGCCGCAAGAATGATGATA 57.020 36.364 5.83 0.00 43.02 2.15
3468 4165 3.872511 TTTTGCCGCAAGAATGATGAT 57.127 38.095 5.83 0.00 43.02 2.45
3469 4166 3.872511 ATTTTGCCGCAAGAATGATGA 57.127 38.095 5.83 0.00 43.02 2.92
3470 4167 3.927758 TCAATTTTGCCGCAAGAATGATG 59.072 39.130 9.69 7.76 43.02 3.07
3471 4168 3.928375 GTCAATTTTGCCGCAAGAATGAT 59.072 39.130 15.27 1.39 43.02 2.45
3472 4169 3.243670 TGTCAATTTTGCCGCAAGAATGA 60.244 39.130 9.69 9.69 43.02 2.57
3473 4170 3.058450 TGTCAATTTTGCCGCAAGAATG 58.942 40.909 5.83 5.66 43.02 2.67
3474 4171 3.383620 TGTCAATTTTGCCGCAAGAAT 57.616 38.095 5.83 6.77 43.02 2.40
3475 4172 2.879002 TGTCAATTTTGCCGCAAGAA 57.121 40.000 5.83 4.77 43.02 2.52
3476 4173 2.879002 TTGTCAATTTTGCCGCAAGA 57.121 40.000 5.83 1.87 43.02 3.02
3477 4174 4.471157 AATTTGTCAATTTTGCCGCAAG 57.529 36.364 5.83 0.00 0.00 4.01
3478 4175 4.333649 TCAAATTTGTCAATTTTGCCGCAA 59.666 33.333 20.61 0.38 40.09 4.85
3479 4176 3.873361 TCAAATTTGTCAATTTTGCCGCA 59.127 34.783 20.61 7.56 40.09 5.69
3480 4177 4.210629 GTCAAATTTGTCAATTTTGCCGC 58.789 39.130 20.61 12.95 40.09 6.53
3481 4178 4.511082 AGGTCAAATTTGTCAATTTTGCCG 59.489 37.500 20.61 5.65 40.09 5.69
3482 4179 7.361116 CCATAGGTCAAATTTGTCAATTTTGCC 60.361 37.037 20.61 21.66 40.09 4.52
3483 4180 7.387397 TCCATAGGTCAAATTTGTCAATTTTGC 59.613 33.333 20.61 16.62 40.09 3.68
3484 4181 8.830201 TCCATAGGTCAAATTTGTCAATTTTG 57.170 30.769 17.47 19.85 40.09 2.44
3485 4182 9.439500 CATCCATAGGTCAAATTTGTCAATTTT 57.561 29.630 17.47 0.59 40.09 1.82
3486 4183 8.814931 TCATCCATAGGTCAAATTTGTCAATTT 58.185 29.630 17.47 2.98 42.37 1.82
3487 4184 8.365060 TCATCCATAGGTCAAATTTGTCAATT 57.635 30.769 17.47 5.14 33.72 2.32
3488 4185 7.959658 TCATCCATAGGTCAAATTTGTCAAT 57.040 32.000 17.47 7.25 0.00 2.57
3489 4186 7.773489 TTCATCCATAGGTCAAATTTGTCAA 57.227 32.000 17.47 5.31 0.00 3.18
3490 4187 7.773489 TTTCATCCATAGGTCAAATTTGTCA 57.227 32.000 17.47 0.00 0.00 3.58
3491 4188 8.469200 TGATTTCATCCATAGGTCAAATTTGTC 58.531 33.333 17.47 12.07 0.00 3.18
3492 4189 8.365060 TGATTTCATCCATAGGTCAAATTTGT 57.635 30.769 17.47 1.67 0.00 2.83
3493 4190 9.656040 TTTGATTTCATCCATAGGTCAAATTTG 57.344 29.630 12.15 12.15 31.46 2.32
3496 4193 9.204337 TGATTTGATTTCATCCATAGGTCAAAT 57.796 29.630 9.41 9.41 43.48 2.32
3497 4194 8.592529 TGATTTGATTTCATCCATAGGTCAAA 57.407 30.769 0.00 0.00 38.14 2.69
3498 4195 8.771521 ATGATTTGATTTCATCCATAGGTCAA 57.228 30.769 0.00 0.00 0.00 3.18
3499 4196 9.511272 CTATGATTTGATTTCATCCATAGGTCA 57.489 33.333 0.00 0.00 35.50 4.02
3500 4197 9.730705 TCTATGATTTGATTTCATCCATAGGTC 57.269 33.333 16.02 0.00 35.50 3.85
3509 4206 9.745880 GCAGTTCATTCTATGATTTGATTTCAT 57.254 29.630 0.00 0.00 39.39 2.57
3510 4207 8.192774 GGCAGTTCATTCTATGATTTGATTTCA 58.807 33.333 0.00 0.00 39.39 2.69
3511 4208 7.650903 GGGCAGTTCATTCTATGATTTGATTTC 59.349 37.037 0.00 0.00 39.39 2.17
3512 4209 7.495055 GGGCAGTTCATTCTATGATTTGATTT 58.505 34.615 0.00 0.00 39.39 2.17
3513 4210 6.238842 CGGGCAGTTCATTCTATGATTTGATT 60.239 38.462 0.00 0.00 39.39 2.57
3514 4211 5.240183 CGGGCAGTTCATTCTATGATTTGAT 59.760 40.000 0.00 0.00 39.39 2.57
3515 4212 4.576053 CGGGCAGTTCATTCTATGATTTGA 59.424 41.667 0.00 0.00 39.39 2.69
3516 4213 4.336433 ACGGGCAGTTCATTCTATGATTTG 59.664 41.667 0.00 0.00 39.39 2.32
3517 4214 4.336433 CACGGGCAGTTCATTCTATGATTT 59.664 41.667 0.00 0.00 39.39 2.17
3518 4215 3.879295 CACGGGCAGTTCATTCTATGATT 59.121 43.478 0.00 0.00 39.39 2.57
3519 4216 3.134623 TCACGGGCAGTTCATTCTATGAT 59.865 43.478 0.00 0.00 39.39 2.45
3520 4217 2.499693 TCACGGGCAGTTCATTCTATGA 59.500 45.455 0.00 0.00 37.55 2.15
3521 4218 2.905075 TCACGGGCAGTTCATTCTATG 58.095 47.619 0.00 0.00 0.00 2.23
3522 4219 3.627395 TTCACGGGCAGTTCATTCTAT 57.373 42.857 0.00 0.00 0.00 1.98
3523 4220 3.071479 GTTTCACGGGCAGTTCATTCTA 58.929 45.455 0.00 0.00 0.00 2.10
3524 4221 1.880027 GTTTCACGGGCAGTTCATTCT 59.120 47.619 0.00 0.00 0.00 2.40
3525 4222 1.880027 AGTTTCACGGGCAGTTCATTC 59.120 47.619 0.00 0.00 0.00 2.67
3526 4223 1.981256 AGTTTCACGGGCAGTTCATT 58.019 45.000 0.00 0.00 0.00 2.57
3527 4224 2.851263 TAGTTTCACGGGCAGTTCAT 57.149 45.000 0.00 0.00 0.00 2.57
3528 4225 2.851263 ATAGTTTCACGGGCAGTTCA 57.149 45.000 0.00 0.00 0.00 3.18
3529 4226 2.418976 GGAATAGTTTCACGGGCAGTTC 59.581 50.000 0.00 0.00 33.23 3.01
3530 4227 2.224670 TGGAATAGTTTCACGGGCAGTT 60.225 45.455 0.00 0.00 33.23 3.16
3531 4228 1.349688 TGGAATAGTTTCACGGGCAGT 59.650 47.619 0.00 0.00 33.23 4.40
3532 4229 1.737793 GTGGAATAGTTTCACGGGCAG 59.262 52.381 0.00 0.00 33.23 4.85
3533 4230 1.816074 GTGGAATAGTTTCACGGGCA 58.184 50.000 0.00 0.00 33.23 5.36
3534 4231 0.725117 CGTGGAATAGTTTCACGGGC 59.275 55.000 14.11 0.00 35.07 6.13
3535 4232 0.725117 GCGTGGAATAGTTTCACGGG 59.275 55.000 21.04 0.00 37.11 5.28
3536 4233 0.368907 CGCGTGGAATAGTTTCACGG 59.631 55.000 21.04 10.31 37.11 4.94
3537 4234 0.368907 CCGCGTGGAATAGTTTCACG 59.631 55.000 10.20 16.85 38.37 4.35
3538 4235 0.096454 GCCGCGTGGAATAGTTTCAC 59.904 55.000 21.76 0.00 37.49 3.18
3539 4236 0.036765 AGCCGCGTGGAATAGTTTCA 60.037 50.000 21.76 0.00 37.49 2.69
3540 4237 0.373716 CAGCCGCGTGGAATAGTTTC 59.626 55.000 21.76 0.00 37.49 2.78
3541 4238 0.036765 TCAGCCGCGTGGAATAGTTT 60.037 50.000 21.76 0.00 37.49 2.66
3542 4239 0.739813 GTCAGCCGCGTGGAATAGTT 60.740 55.000 21.76 0.00 37.49 2.24
3543 4240 1.153628 GTCAGCCGCGTGGAATAGT 60.154 57.895 21.76 0.00 37.49 2.12
3544 4241 1.883084 GGTCAGCCGCGTGGAATAG 60.883 63.158 21.76 4.57 37.49 1.73
3545 4242 1.895020 AAGGTCAGCCGCGTGGAATA 61.895 55.000 21.76 0.00 40.50 1.75
3546 4243 2.748058 AAAGGTCAGCCGCGTGGAAT 62.748 55.000 21.76 2.67 40.50 3.01
3547 4244 2.951475 AAAAGGTCAGCCGCGTGGAA 62.951 55.000 21.76 0.00 40.50 3.53
3548 4245 2.951475 AAAAAGGTCAGCCGCGTGGA 62.951 55.000 21.76 0.00 40.50 4.02
3549 4246 2.551912 AAAAAGGTCAGCCGCGTGG 61.552 57.895 11.67 11.67 40.50 4.94
3550 4247 1.370414 CAAAAAGGTCAGCCGCGTG 60.370 57.895 4.92 0.00 40.50 5.34
3551 4248 1.822186 ACAAAAAGGTCAGCCGCGT 60.822 52.632 4.92 0.00 40.50 6.01
3552 4249 1.370414 CACAAAAAGGTCAGCCGCG 60.370 57.895 0.00 0.00 40.50 6.46
3553 4250 0.594796 CACACAAAAAGGTCAGCCGC 60.595 55.000 0.00 0.00 40.50 6.53
3554 4251 1.021202 TCACACAAAAAGGTCAGCCG 58.979 50.000 0.00 0.00 40.50 5.52
3555 4252 1.268539 CGTCACACAAAAAGGTCAGCC 60.269 52.381 0.00 0.00 0.00 4.85
3556 4253 1.859998 GCGTCACACAAAAAGGTCAGC 60.860 52.381 0.00 0.00 0.00 4.26
3557 4254 1.670811 AGCGTCACACAAAAAGGTCAG 59.329 47.619 0.00 0.00 0.00 3.51
3558 4255 1.668751 GAGCGTCACACAAAAAGGTCA 59.331 47.619 0.00 0.00 0.00 4.02
3559 4256 1.332904 CGAGCGTCACACAAAAAGGTC 60.333 52.381 0.00 0.00 0.00 3.85
3560 4257 0.655733 CGAGCGTCACACAAAAAGGT 59.344 50.000 0.00 0.00 0.00 3.50
3561 4258 0.934496 TCGAGCGTCACACAAAAAGG 59.066 50.000 0.00 0.00 0.00 3.11
3562 4259 1.326245 TGTCGAGCGTCACACAAAAAG 59.674 47.619 0.00 0.00 0.00 2.27
3563 4260 1.061421 GTGTCGAGCGTCACACAAAAA 59.939 47.619 13.68 0.00 42.20 1.94
3564 4261 0.648441 GTGTCGAGCGTCACACAAAA 59.352 50.000 13.68 0.00 42.20 2.44
3565 4262 1.476235 CGTGTCGAGCGTCACACAAA 61.476 55.000 17.39 0.00 42.67 2.83
3566 4263 1.942223 CGTGTCGAGCGTCACACAA 60.942 57.895 17.39 0.00 42.67 3.33
3567 4264 2.325666 TTCGTGTCGAGCGTCACACA 62.326 55.000 17.39 3.73 42.67 3.72
3568 4265 1.597700 CTTCGTGTCGAGCGTCACAC 61.598 60.000 17.39 11.44 39.70 3.82
3569 4266 1.370051 CTTCGTGTCGAGCGTCACA 60.370 57.895 17.39 1.38 37.14 3.58
3570 4267 1.082300 TCTTCGTGTCGAGCGTCAC 60.082 57.895 9.59 9.59 37.14 3.67
3571 4268 1.082300 GTCTTCGTGTCGAGCGTCA 60.082 57.895 8.81 0.00 37.14 4.35
3572 4269 2.138601 CGTCTTCGTGTCGAGCGTC 61.139 63.158 8.81 0.00 37.14 5.19
3573 4270 2.127345 CGTCTTCGTGTCGAGCGT 60.127 61.111 8.81 0.00 37.14 5.07
3574 4271 3.524759 GCGTCTTCGTGTCGAGCG 61.525 66.667 3.23 3.23 37.14 5.03
3575 4272 3.173240 GGCGTCTTCGTGTCGAGC 61.173 66.667 0.00 0.00 37.14 5.03
3576 4273 2.081212 GTGGCGTCTTCGTGTCGAG 61.081 63.158 0.00 0.00 37.14 4.04
3577 4274 2.050714 GTGGCGTCTTCGTGTCGA 60.051 61.111 0.00 0.00 39.49 4.20
3578 4275 2.354188 TGTGGCGTCTTCGTGTCG 60.354 61.111 0.00 0.00 39.49 4.35
3579 4276 0.039798 TAGTGTGGCGTCTTCGTGTC 60.040 55.000 0.00 0.00 39.49 3.67
3580 4277 0.318445 GTAGTGTGGCGTCTTCGTGT 60.318 55.000 0.00 0.00 39.49 4.49
3581 4278 0.318360 TGTAGTGTGGCGTCTTCGTG 60.318 55.000 0.00 0.00 39.49 4.35
3582 4279 0.601558 ATGTAGTGTGGCGTCTTCGT 59.398 50.000 0.00 0.00 39.49 3.85
3583 4280 1.390123 CAATGTAGTGTGGCGTCTTCG 59.610 52.381 0.00 0.00 40.37 3.79
3584 4281 2.157668 CACAATGTAGTGTGGCGTCTTC 59.842 50.000 4.66 0.00 44.29 2.87
3585 4282 2.143122 CACAATGTAGTGTGGCGTCTT 58.857 47.619 4.66 0.00 44.29 3.01
3586 4283 1.795768 CACAATGTAGTGTGGCGTCT 58.204 50.000 4.66 0.00 44.29 4.18
3593 4290 0.591170 GGCGTTGCACAATGTAGTGT 59.409 50.000 4.63 0.00 41.52 3.55
3594 4291 0.874390 AGGCGTTGCACAATGTAGTG 59.126 50.000 4.63 0.00 42.37 2.74
3595 4292 1.156736 GAGGCGTTGCACAATGTAGT 58.843 50.000 4.63 0.00 0.00 2.73
3596 4293 1.135972 GTGAGGCGTTGCACAATGTAG 60.136 52.381 4.63 0.00 35.19 2.74
3597 4294 0.871722 GTGAGGCGTTGCACAATGTA 59.128 50.000 4.63 0.00 35.19 2.29
3598 4295 1.100463 TGTGAGGCGTTGCACAATGT 61.100 50.000 4.63 0.00 41.61 2.71
3599 4296 0.386352 CTGTGAGGCGTTGCACAATG 60.386 55.000 0.00 0.00 43.65 2.82
3600 4297 0.534877 TCTGTGAGGCGTTGCACAAT 60.535 50.000 0.00 0.00 43.65 2.71
3601 4298 0.534877 ATCTGTGAGGCGTTGCACAA 60.535 50.000 0.00 0.00 43.65 3.33
3602 4299 0.320050 TATCTGTGAGGCGTTGCACA 59.680 50.000 0.00 0.00 42.25 4.57
3603 4300 1.002366 CTATCTGTGAGGCGTTGCAC 58.998 55.000 0.00 0.00 35.63 4.57
3604 4301 0.108186 CCTATCTGTGAGGCGTTGCA 60.108 55.000 0.00 0.00 0.00 4.08
3605 4302 2.682893 CCTATCTGTGAGGCGTTGC 58.317 57.895 0.00 0.00 0.00 4.17
3611 4308 1.032794 TGTAGCGCCTATCTGTGAGG 58.967 55.000 2.29 0.00 37.12 3.86
3612 4309 1.598183 CGTGTAGCGCCTATCTGTGAG 60.598 57.143 2.29 0.00 0.00 3.51
3613 4310 0.380733 CGTGTAGCGCCTATCTGTGA 59.619 55.000 2.29 0.00 0.00 3.58
3614 4311 2.873367 CGTGTAGCGCCTATCTGTG 58.127 57.895 2.29 0.00 0.00 3.66
3625 4322 2.586357 GCTGGCTAGGCGTGTAGC 60.586 66.667 12.19 11.00 44.14 3.58
3626 4323 2.278857 CGCTGGCTAGGCGTGTAG 60.279 66.667 12.19 4.40 46.37 2.74
3632 4329 2.278661 GTACGACGCTGGCTAGGC 60.279 66.667 9.85 9.85 0.00 3.93
3633 4330 2.412112 GGTACGACGCTGGCTAGG 59.588 66.667 0.00 0.00 0.00 3.02
3634 4331 1.735376 ATGGGTACGACGCTGGCTAG 61.735 60.000 0.00 0.00 31.67 3.42
3635 4332 1.755395 ATGGGTACGACGCTGGCTA 60.755 57.895 0.00 0.00 31.67 3.93
3636 4333 3.075005 ATGGGTACGACGCTGGCT 61.075 61.111 0.00 0.00 31.67 4.75
3637 4334 2.890474 CATGGGTACGACGCTGGC 60.890 66.667 0.00 0.00 31.67 4.85
3638 4335 1.809619 CACATGGGTACGACGCTGG 60.810 63.158 0.00 0.00 31.67 4.85
3639 4336 0.179111 ATCACATGGGTACGACGCTG 60.179 55.000 0.00 0.00 31.67 5.18
3640 4337 0.102481 GATCACATGGGTACGACGCT 59.898 55.000 0.00 0.00 31.67 5.07
3641 4338 0.874607 GGATCACATGGGTACGACGC 60.875 60.000 0.00 0.00 0.00 5.19
3642 4339 0.594028 CGGATCACATGGGTACGACG 60.594 60.000 0.00 0.00 0.00 5.12
3643 4340 0.742505 TCGGATCACATGGGTACGAC 59.257 55.000 7.17 0.00 0.00 4.34
3644 4341 1.476477 TTCGGATCACATGGGTACGA 58.524 50.000 7.17 7.17 0.00 3.43
3645 4342 2.303163 TTTCGGATCACATGGGTACG 57.697 50.000 0.00 0.00 0.00 3.67
3646 4343 5.820947 AGTAATTTTCGGATCACATGGGTAC 59.179 40.000 0.00 0.00 0.00 3.34
3647 4344 5.996644 AGTAATTTTCGGATCACATGGGTA 58.003 37.500 0.00 0.00 0.00 3.69
3648 4345 4.855340 AGTAATTTTCGGATCACATGGGT 58.145 39.130 0.00 0.00 0.00 4.51
3649 4346 6.542370 ACTTAGTAATTTTCGGATCACATGGG 59.458 38.462 0.00 0.00 0.00 4.00
3650 4347 7.279981 TGACTTAGTAATTTTCGGATCACATGG 59.720 37.037 0.00 0.00 0.00 3.66
3651 4348 8.196802 TGACTTAGTAATTTTCGGATCACATG 57.803 34.615 0.00 0.00 0.00 3.21
3652 4349 8.041323 ACTGACTTAGTAATTTTCGGATCACAT 58.959 33.333 0.00 0.00 38.04 3.21
3653 4350 7.330946 CACTGACTTAGTAATTTTCGGATCACA 59.669 37.037 0.00 0.00 37.60 3.58
3654 4351 7.331193 ACACTGACTTAGTAATTTTCGGATCAC 59.669 37.037 0.00 0.00 37.60 3.06
3655 4352 7.330946 CACACTGACTTAGTAATTTTCGGATCA 59.669 37.037 0.00 0.00 37.60 2.92
3656 4353 7.674240 GCACACTGACTTAGTAATTTTCGGATC 60.674 40.741 0.00 0.00 37.60 3.36
3657 4354 6.092259 GCACACTGACTTAGTAATTTTCGGAT 59.908 38.462 0.00 0.00 37.60 4.18
3658 4355 5.407387 GCACACTGACTTAGTAATTTTCGGA 59.593 40.000 0.00 0.00 37.60 4.55
3659 4356 5.178623 TGCACACTGACTTAGTAATTTTCGG 59.821 40.000 0.00 0.00 37.60 4.30
3660 4357 6.223138 TGCACACTGACTTAGTAATTTTCG 57.777 37.500 0.00 0.00 37.60 3.46
3661 4358 6.573725 CGTTGCACACTGACTTAGTAATTTTC 59.426 38.462 0.00 0.00 37.60 2.29
3662 4359 6.427150 CGTTGCACACTGACTTAGTAATTTT 58.573 36.000 0.00 0.00 37.60 1.82
3663 4360 5.560183 GCGTTGCACACTGACTTAGTAATTT 60.560 40.000 0.00 0.00 37.60 1.82
3664 4361 4.084013 GCGTTGCACACTGACTTAGTAATT 60.084 41.667 0.00 0.00 37.60 1.40
3665 4362 3.432252 GCGTTGCACACTGACTTAGTAAT 59.568 43.478 0.00 0.00 37.60 1.89
3666 4363 2.798283 GCGTTGCACACTGACTTAGTAA 59.202 45.455 0.00 0.00 37.60 2.24
3667 4364 2.400399 GCGTTGCACACTGACTTAGTA 58.600 47.619 0.00 0.00 37.60 1.82
3668 4365 1.217882 GCGTTGCACACTGACTTAGT 58.782 50.000 0.00 0.00 41.36 2.24
3669 4366 0.161658 CGCGTTGCACACTGACTTAG 59.838 55.000 0.00 0.00 0.00 2.18
3670 4367 0.528901 ACGCGTTGCACACTGACTTA 60.529 50.000 5.58 0.00 0.00 2.24
3671 4368 1.813753 ACGCGTTGCACACTGACTT 60.814 52.632 5.58 0.00 0.00 3.01
3672 4369 2.202878 ACGCGTTGCACACTGACT 60.203 55.556 5.58 0.00 0.00 3.41
3673 4370 2.053116 CACGCGTTGCACACTGAC 60.053 61.111 10.22 0.00 0.00 3.51
3674 4371 2.202810 TCACGCGTTGCACACTGA 60.203 55.556 10.22 0.00 0.00 3.41
3675 4372 2.150809 CTCTCACGCGTTGCACACTG 62.151 60.000 10.22 0.00 0.00 3.66
3676 4373 1.951130 CTCTCACGCGTTGCACACT 60.951 57.895 10.22 0.00 0.00 3.55
3677 4374 1.762222 AACTCTCACGCGTTGCACAC 61.762 55.000 10.22 0.00 0.00 3.82
3678 4375 0.249114 TAACTCTCACGCGTTGCACA 60.249 50.000 10.22 0.00 0.00 4.57
3679 4376 0.435008 CTAACTCTCACGCGTTGCAC 59.565 55.000 10.22 0.00 0.00 4.57
3680 4377 0.666274 CCTAACTCTCACGCGTTGCA 60.666 55.000 10.22 0.00 0.00 4.08
3681 4378 1.956620 GCCTAACTCTCACGCGTTGC 61.957 60.000 10.22 0.00 0.00 4.17
3682 4379 0.666274 TGCCTAACTCTCACGCGTTG 60.666 55.000 10.22 5.73 0.00 4.10
3683 4380 0.666577 GTGCCTAACTCTCACGCGTT 60.667 55.000 10.22 0.00 0.00 4.84
3684 4381 1.080705 GTGCCTAACTCTCACGCGT 60.081 57.895 5.58 5.58 0.00 6.01
3685 4382 1.805945 GGTGCCTAACTCTCACGCG 60.806 63.158 3.53 3.53 0.00 6.01
3686 4383 0.108138 ATGGTGCCTAACTCTCACGC 60.108 55.000 0.00 0.00 0.00 5.34
3687 4384 3.735237 ATATGGTGCCTAACTCTCACG 57.265 47.619 0.00 0.00 0.00 4.35
3688 4385 7.667557 TGTATAATATGGTGCCTAACTCTCAC 58.332 38.462 0.00 0.00 0.00 3.51
3689 4386 7.509318 ACTGTATAATATGGTGCCTAACTCTCA 59.491 37.037 0.00 0.00 0.00 3.27
3690 4387 7.815068 CACTGTATAATATGGTGCCTAACTCTC 59.185 40.741 0.00 0.00 0.00 3.20
3691 4388 7.290248 ACACTGTATAATATGGTGCCTAACTCT 59.710 37.037 0.00 0.00 0.00 3.24
3692 4389 7.442656 ACACTGTATAATATGGTGCCTAACTC 58.557 38.462 0.00 0.00 0.00 3.01
3693 4390 7.374975 ACACTGTATAATATGGTGCCTAACT 57.625 36.000 0.00 0.00 0.00 2.24
3694 4391 7.331193 GCTACACTGTATAATATGGTGCCTAAC 59.669 40.741 0.00 0.00 0.00 2.34
3695 4392 7.383687 GCTACACTGTATAATATGGTGCCTAA 58.616 38.462 0.00 0.00 0.00 2.69
3696 4393 6.349860 CGCTACACTGTATAATATGGTGCCTA 60.350 42.308 0.00 0.00 0.00 3.93
3697 4394 5.566826 CGCTACACTGTATAATATGGTGCCT 60.567 44.000 0.00 0.00 0.00 4.75
3698 4395 4.625742 CGCTACACTGTATAATATGGTGCC 59.374 45.833 0.00 0.00 0.00 5.01
3699 4396 5.227908 ACGCTACACTGTATAATATGGTGC 58.772 41.667 0.00 0.00 0.00 5.01
3700 4397 6.678878 AGACGCTACACTGTATAATATGGTG 58.321 40.000 0.00 0.00 0.00 4.17
3701 4398 6.896021 AGACGCTACACTGTATAATATGGT 57.104 37.500 0.00 0.00 0.00 3.55
3702 4399 6.967767 GCTAGACGCTACACTGTATAATATGG 59.032 42.308 0.00 0.00 35.14 2.74
3703 4400 7.956508 GCTAGACGCTACACTGTATAATATG 57.043 40.000 0.00 0.00 35.14 1.78
3719 4416 0.100861 AACGCCTAGAAGCTAGACGC 59.899 55.000 9.54 2.37 39.57 5.19
3720 4417 1.828832 CAACGCCTAGAAGCTAGACG 58.171 55.000 8.31 8.31 0.00 4.18
3721 4418 1.135083 TGCAACGCCTAGAAGCTAGAC 60.135 52.381 0.00 0.00 0.00 2.59
3722 4419 1.135083 GTGCAACGCCTAGAAGCTAGA 60.135 52.381 0.00 0.00 0.00 2.43
3723 4420 1.134965 AGTGCAACGCCTAGAAGCTAG 60.135 52.381 0.00 0.00 45.86 3.42
3724 4421 0.895530 AGTGCAACGCCTAGAAGCTA 59.104 50.000 0.00 0.00 45.86 3.32
3725 4422 0.895530 TAGTGCAACGCCTAGAAGCT 59.104 50.000 0.00 0.00 45.86 3.74
3726 4423 1.281899 CTAGTGCAACGCCTAGAAGC 58.718 55.000 3.56 0.00 45.86 3.86
3727 4424 2.263077 CACTAGTGCAACGCCTAGAAG 58.737 52.381 10.54 4.67 45.86 2.85
3728 4425 1.067142 CCACTAGTGCAACGCCTAGAA 60.067 52.381 17.86 0.00 45.86 2.10
3729 4426 0.530744 CCACTAGTGCAACGCCTAGA 59.469 55.000 17.86 0.00 45.86 2.43
3730 4427 0.246635 ACCACTAGTGCAACGCCTAG 59.753 55.000 17.86 7.38 45.86 3.02
3731 4428 0.682852 AACCACTAGTGCAACGCCTA 59.317 50.000 17.86 0.00 45.86 3.93
3732 4429 0.884704 CAACCACTAGTGCAACGCCT 60.885 55.000 17.86 0.00 45.86 5.52
3733 4430 1.574428 CAACCACTAGTGCAACGCC 59.426 57.895 17.86 0.00 45.86 5.68
3734 4431 1.082104 GCAACCACTAGTGCAACGC 60.082 57.895 17.86 12.35 45.86 4.84
3735 4432 0.944386 AAGCAACCACTAGTGCAACG 59.056 50.000 17.86 6.34 45.86 4.10
3736 4433 1.946768 TGAAGCAACCACTAGTGCAAC 59.053 47.619 17.86 6.35 0.00 4.17
3737 4434 2.340210 TGAAGCAACCACTAGTGCAA 57.660 45.000 17.86 0.00 0.00 4.08
3738 4435 2.566833 ATGAAGCAACCACTAGTGCA 57.433 45.000 17.86 8.36 0.00 4.57
3739 4436 3.923017 AAATGAAGCAACCACTAGTGC 57.077 42.857 17.86 6.14 0.00 4.40
3740 4437 5.186996 ACAAAATGAAGCAACCACTAGTG 57.813 39.130 16.34 16.34 0.00 2.74
3741 4438 6.017109 CACTACAAAATGAAGCAACCACTAGT 60.017 38.462 0.00 0.00 0.00 2.57
3742 4439 6.373779 CACTACAAAATGAAGCAACCACTAG 58.626 40.000 0.00 0.00 0.00 2.57
3743 4440 5.278266 GCACTACAAAATGAAGCAACCACTA 60.278 40.000 0.00 0.00 0.00 2.74
3744 4441 4.499696 GCACTACAAAATGAAGCAACCACT 60.500 41.667 0.00 0.00 0.00 4.00
3745 4442 3.735746 GCACTACAAAATGAAGCAACCAC 59.264 43.478 0.00 0.00 0.00 4.16
3746 4443 3.382865 TGCACTACAAAATGAAGCAACCA 59.617 39.130 0.00 0.00 0.00 3.67
3747 4444 3.976169 TGCACTACAAAATGAAGCAACC 58.024 40.909 0.00 0.00 0.00 3.77
3749 4446 4.142071 TGGTTGCACTACAAAATGAAGCAA 60.142 37.500 0.00 0.00 40.82 3.91
3750 4447 3.382865 TGGTTGCACTACAAAATGAAGCA 59.617 39.130 0.00 0.00 40.82 3.91
3751 4448 3.735746 GTGGTTGCACTACAAAATGAAGC 59.264 43.478 0.00 0.00 40.82 3.86
3752 4449 5.186996 AGTGGTTGCACTACAAAATGAAG 57.813 39.130 0.00 0.00 40.82 3.02
3753 4450 5.825679 ACTAGTGGTTGCACTACAAAATGAA 59.174 36.000 0.00 0.00 40.82 2.57
3754 4451 5.238432 CACTAGTGGTTGCACTACAAAATGA 59.762 40.000 15.49 0.00 40.82 2.57
3755 4452 5.451908 CACTAGTGGTTGCACTACAAAATG 58.548 41.667 15.49 0.00 40.82 2.32
3756 4453 4.023193 GCACTAGTGGTTGCACTACAAAAT 60.023 41.667 23.95 0.00 40.82 1.82
3757 4454 3.314080 GCACTAGTGGTTGCACTACAAAA 59.686 43.478 23.95 0.00 40.82 2.44
3758 4455 2.875933 GCACTAGTGGTTGCACTACAAA 59.124 45.455 23.95 0.00 40.82 2.83
3759 4456 2.158885 TGCACTAGTGGTTGCACTACAA 60.159 45.455 23.95 0.00 36.68 2.41
3760 4457 1.414550 TGCACTAGTGGTTGCACTACA 59.585 47.619 23.95 7.41 36.68 2.74
3761 4458 2.069273 CTGCACTAGTGGTTGCACTAC 58.931 52.381 23.95 4.83 36.68 2.73
3762 4459 1.608025 GCTGCACTAGTGGTTGCACTA 60.608 52.381 23.95 0.00 36.68 2.74
3763 4460 0.886490 GCTGCACTAGTGGTTGCACT 60.886 55.000 23.95 0.00 39.08 4.40
3764 4461 1.576421 GCTGCACTAGTGGTTGCAC 59.424 57.895 23.95 6.97 32.03 4.57
3765 4462 1.960763 CGCTGCACTAGTGGTTGCA 60.961 57.895 23.95 14.47 33.19 4.08
3766 4463 2.863153 CGCTGCACTAGTGGTTGC 59.137 61.111 23.95 10.41 33.19 4.17
3767 4464 2.680913 GGCGCTGCACTAGTGGTTG 61.681 63.158 23.95 6.99 37.39 3.77
3768 4465 2.358737 GGCGCTGCACTAGTGGTT 60.359 61.111 23.95 0.00 37.39 3.67
3769 4466 3.314331 AGGCGCTGCACTAGTGGT 61.314 61.111 23.95 0.00 37.39 4.16
3770 4467 2.816958 CAGGCGCTGCACTAGTGG 60.817 66.667 23.95 9.71 37.39 4.00
3771 4468 1.808799 CTCAGGCGCTGCACTAGTG 60.809 63.158 18.93 18.93 39.95 2.74
3772 4469 1.943116 CTCTCAGGCGCTGCACTAGT 61.943 60.000 7.64 0.00 0.00 2.57
3773 4470 1.226916 CTCTCAGGCGCTGCACTAG 60.227 63.158 7.64 0.00 0.00 2.57
3774 4471 2.888111 CTCTCAGGCGCTGCACTA 59.112 61.111 7.64 0.00 0.00 2.74
3775 4472 4.756458 GCTCTCAGGCGCTGCACT 62.756 66.667 7.64 0.00 0.00 4.40
3776 4473 3.362399 TAGCTCTCAGGCGCTGCAC 62.362 63.158 7.64 0.00 37.05 4.57
3777 4474 3.070576 TAGCTCTCAGGCGCTGCA 61.071 61.111 7.64 0.00 37.05 4.41
3778 4475 2.279385 CTAGCTCTCAGGCGCTGC 60.279 66.667 7.64 2.66 37.05 5.25
3779 4476 2.416678 CCTAGCTCTCAGGCGCTG 59.583 66.667 7.64 3.67 37.05 5.18
3792 4489 0.387367 CTGTATAGTGCGGCGCCTAG 60.387 60.000 30.82 15.05 0.00 3.02
3793 4490 1.105167 ACTGTATAGTGCGGCGCCTA 61.105 55.000 30.82 27.23 35.34 3.93
3794 4491 2.417516 CTGTATAGTGCGGCGCCT 59.582 61.111 30.82 26.02 0.00 5.52
3795 4492 2.106332 ACTGTATAGTGCGGCGCC 59.894 61.111 30.82 19.07 35.34 6.53
3796 4493 3.309675 CACTGTATAGTGCGGCGC 58.690 61.111 27.44 27.44 46.93 6.53
3803 4500 1.338337 CTAGGCGCTGCACTGTATAGT 59.662 52.381 7.64 0.00 37.75 2.12
3804 4501 1.932604 GCTAGGCGCTGCACTGTATAG 60.933 57.143 7.64 0.00 35.14 1.31
3805 4502 0.032130 GCTAGGCGCTGCACTGTATA 59.968 55.000 7.64 0.00 35.14 1.47
3806 4503 1.227380 GCTAGGCGCTGCACTGTAT 60.227 57.895 7.64 0.00 35.14 2.29
3807 4504 2.184322 GCTAGGCGCTGCACTGTA 59.816 61.111 7.64 0.00 35.14 2.74
3820 4517 1.753649 TGTGCAGAGCCTAAGAGCTAG 59.246 52.381 0.00 0.00 45.15 3.42
3821 4518 1.852633 TGTGCAGAGCCTAAGAGCTA 58.147 50.000 0.00 0.00 45.15 3.32
3823 4520 1.669779 CATTGTGCAGAGCCTAAGAGC 59.330 52.381 0.00 0.00 0.00 4.09
3824 4521 2.935201 GTCATTGTGCAGAGCCTAAGAG 59.065 50.000 0.00 0.00 0.00 2.85
3825 4522 2.568956 AGTCATTGTGCAGAGCCTAAGA 59.431 45.455 0.00 0.00 0.00 2.10
3826 4523 2.983229 AGTCATTGTGCAGAGCCTAAG 58.017 47.619 0.00 0.00 0.00 2.18
3827 4524 3.423539 AAGTCATTGTGCAGAGCCTAA 57.576 42.857 0.00 0.00 0.00 2.69
3828 4525 3.679917 GCTAAGTCATTGTGCAGAGCCTA 60.680 47.826 0.00 0.00 0.00 3.93
3829 4526 2.938756 GCTAAGTCATTGTGCAGAGCCT 60.939 50.000 0.00 0.00 0.00 4.58
3830 4527 1.399791 GCTAAGTCATTGTGCAGAGCC 59.600 52.381 0.00 0.00 0.00 4.70
3831 4528 2.079158 TGCTAAGTCATTGTGCAGAGC 58.921 47.619 0.00 0.00 0.00 4.09
3832 4529 4.959596 ATTGCTAAGTCATTGTGCAGAG 57.040 40.909 0.00 0.00 33.13 3.35
3833 4530 5.710513 AAATTGCTAAGTCATTGTGCAGA 57.289 34.783 0.00 0.00 33.13 4.26
3834 4531 6.774354 AAAAATTGCTAAGTCATTGTGCAG 57.226 33.333 0.00 0.00 33.13 4.41
3835 4532 6.867816 CCTAAAAATTGCTAAGTCATTGTGCA 59.132 34.615 0.00 0.00 0.00 4.57
3836 4533 6.183360 GCCTAAAAATTGCTAAGTCATTGTGC 60.183 38.462 0.00 0.00 0.00 4.57
3837 4534 6.867816 TGCCTAAAAATTGCTAAGTCATTGTG 59.132 34.615 0.00 0.00 0.00 3.33
3838 4535 6.868339 GTGCCTAAAAATTGCTAAGTCATTGT 59.132 34.615 0.00 0.00 0.00 2.71
3839 4536 7.092716 AGTGCCTAAAAATTGCTAAGTCATTG 58.907 34.615 0.00 0.00 0.00 2.82
3840 4537 7.177392 AGAGTGCCTAAAAATTGCTAAGTCATT 59.823 33.333 0.00 0.00 0.00 2.57
3841 4538 6.660949 AGAGTGCCTAAAAATTGCTAAGTCAT 59.339 34.615 0.00 0.00 0.00 3.06
3842 4539 6.003950 AGAGTGCCTAAAAATTGCTAAGTCA 58.996 36.000 0.00 0.00 0.00 3.41
3843 4540 6.317857 CAGAGTGCCTAAAAATTGCTAAGTC 58.682 40.000 0.00 0.00 0.00 3.01
3844 4541 5.183904 CCAGAGTGCCTAAAAATTGCTAAGT 59.816 40.000 0.00 0.00 0.00 2.24
3845 4542 5.393461 CCCAGAGTGCCTAAAAATTGCTAAG 60.393 44.000 0.00 0.00 0.00 2.18
3846 4543 4.462483 CCCAGAGTGCCTAAAAATTGCTAA 59.538 41.667 0.00 0.00 0.00 3.09
3847 4544 4.016444 CCCAGAGTGCCTAAAAATTGCTA 58.984 43.478 0.00 0.00 0.00 3.49
3848 4545 2.827921 CCCAGAGTGCCTAAAAATTGCT 59.172 45.455 0.00 0.00 0.00 3.91
3849 4546 2.094026 CCCCAGAGTGCCTAAAAATTGC 60.094 50.000 0.00 0.00 0.00 3.56
3850 4547 3.056607 CACCCCAGAGTGCCTAAAAATTG 60.057 47.826 0.00 0.00 0.00 2.32
3851 4548 3.165071 CACCCCAGAGTGCCTAAAAATT 58.835 45.455 0.00 0.00 0.00 1.82
3852 4549 2.807676 CACCCCAGAGTGCCTAAAAAT 58.192 47.619 0.00 0.00 0.00 1.82
3853 4550 2.286365 CACCCCAGAGTGCCTAAAAA 57.714 50.000 0.00 0.00 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.