AutoCloner

Multiple sequence alignment - TraesCS1D01G138400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS1D01G138400	chr1D	100.000	3624	0	0	1	3624	189881248	189884871	0.000000e+00	6693.0
1	TraesCS1D01G138400	chr1D	88.356	146	16	1	36	180	470454454	470454309	1.340000e-39	174.0
2	TraesCS1D01G138400	chr1D	93.137	102	3	1	237	334	470454320	470454219	2.920000e-31	147.0
3	TraesCS1D01G138400	chr1D	87.342	79	7	3	1845	1923	303340604	303340679	1.790000e-13	87.9
4	TraesCS1D01G138400	chr1A	92.782	2743	117	24	920	3624	167804874	167802175	0.000000e+00	3893.0
5	TraesCS1D01G138400	chr1A	100.000	28	0	0	783	810	12764747	12764720	7.000000e-03	52.8
6	TraesCS1D01G138400	chr1B	94.679	1090	49	7	2057	3138	263746251	263747339	0.000000e+00	1683.0
7	TraesCS1D01G138400	chr1B	94.683	884	23	4	828	1693	263745374	263746251	0.000000e+00	1351.0
8	TraesCS1D01G138400	chr1B	95.406	283	11	2	3137	3418	263747404	263747685	1.980000e-122	449.0
9	TraesCS1D01G138400	chr1B	96.327	245	7	2	3382	3624	263747687	263747931	5.640000e-108	401.0
10	TraesCS1D01G138400	chr1B	93.617	94	5	1	321	413	656527941	656528034	4.880000e-29	139.0
11	TraesCS1D01G138400	chr6D	92.593	162	11	1	628	788	350087956	350087795	7.830000e-57	231.0
12	TraesCS1D01G138400	chr6D	89.726	146	14	1	36	180	66263726	66263871	6.180000e-43	185.0
13	TraesCS1D01G138400	chr6D	89.726	146	14	1	36	180	66628725	66628870	6.180000e-43	185.0
14	TraesCS1D01G138400	chr6D	92.157	102	4	1	237	334	66263860	66263961	1.360000e-29	141.0
15	TraesCS1D01G138400	chr6D	92.157	102	4	1	237	334	66628859	66628960	1.360000e-29	141.0
16	TraesCS1D01G138400	chr6D	78.173	197	30	11	412	606	445933742	445933557	2.960000e-21	113.0
17	TraesCS1D01G138400	chr6D	89.610	77	5	1	1849	1922	211444021	211443945	1.070000e-15	95.3
18	TraesCS1D01G138400	chr4A	89.831	177	15	3	614	788	733606521	733606346	1.310000e-54	224.0
19	TraesCS1D01G138400	chr4A	100.000	35	0	0	1	35	265455194	265455160	8.400000e-07	65.8
20	TraesCS1D01G138400	chr4A	100.000	30	0	0	121	150	674519148	674519177	5.060000e-04	56.5
21	TraesCS1D01G138400	chr4D	92.357	157	10	2	634	789	12041786	12041941	4.710000e-54	222.0
22	TraesCS1D01G138400	chr4D	91.333	150	12	1	639	787	12041939	12042088	1.710000e-48	204.0
23	TraesCS1D01G138400	chr5D	88.889	180	19	1	609	787	507320131	507320310	1.690000e-53	220.0
24	TraesCS1D01G138400	chrUn	87.293	181	20	3	609	787	30396872	30396693	1.710000e-48	204.0
25	TraesCS1D01G138400	chrUn	79.532	171	26	9	622	787	393046529	393046695	2.960000e-21	113.0
26	TraesCS1D01G138400	chr2D	89.441	161	16	1	628	787	560282348	560282508	6.140000e-48	202.0
27	TraesCS1D01G138400	chr7A	89.726	146	14	1	36	180	63315176	63315321	6.180000e-43	185.0
28	TraesCS1D01G138400	chr7A	87.342	79	7	3	1839	1917	286530739	286530664	1.790000e-13	87.9
29	TraesCS1D01G138400	chr7B	89.041	146	15	1	36	180	44937341	44937486	2.870000e-41	180.0
30	TraesCS1D01G138400	chr7B	90.196	102	6	1	237	334	44937475	44937576	2.940000e-26	130.0
31	TraesCS1D01G138400	chr7B	93.333	60	4	0	548	607	397221376	397221435	4.980000e-14	89.8
32	TraesCS1D01G138400	chr7B	93.333	60	4	0	548	607	611524604	611524545	4.980000e-14	89.8
33	TraesCS1D01G138400	chr5B	92.126	127	10	0	36	162	391868926	391868800	2.870000e-41	180.0
34	TraesCS1D01G138400	chr5B	92.553	94	6	1	321	413	264913922	264914015	2.270000e-27	134.0
35	TraesCS1D01G138400	chr5B	93.407	91	5	1	324	413	425666486	425666396	2.270000e-27	134.0
36	TraesCS1D01G138400	chr5B	89.744	78	5	3	1845	1922	312594258	312594332	2.980000e-16	97.1
37	TraesCS1D01G138400	chr5B	78.000	150	23	8	453	596	307170893	307170748	6.450000e-13	86.1
38	TraesCS1D01G138400	chr3B	87.671	146	17	1	36	180	568344468	568344323	6.220000e-38	169.0
39	TraesCS1D01G138400	chr3B	92.553	94	6	1	321	413	174465040	174465133	2.270000e-27	134.0
40	TraesCS1D01G138400	chr3B	76.263	198	32	13	412	606	809186235	809186420	1.390000e-14	91.6
41	TraesCS1D01G138400	chr3B	76.571	175	28	10	2562	2735	792709321	792709159	2.320000e-12	84.2
42	TraesCS1D01G138400	chr2B	83.234	167	27	1	622	787	762917381	762917215	6.270000e-33	152.0
43	TraesCS1D01G138400	chr2B	92.553	94	6	1	321	413	727220400	727220493	2.270000e-27	134.0
44	TraesCS1D01G138400	chr7D	78.500	200	24	16	412	606	148232371	148232556	2.960000e-21	113.0
45	TraesCS1D01G138400	chr7D	77.833	203	21	19	412	598	550218637	550218831	1.780000e-18	104.0
46	TraesCS1D01G138400	chr6A	92.405	79	3	1	1849	1924	301951288	301951366	3.830000e-20	110.0
47	TraesCS1D01G138400	chr6B	91.139	79	5	2	1849	1927	255522279	255522203	4.950000e-19	106.0
48	TraesCS1D01G138400	chr6B	88.750	80	8	1	1851	1929	623729616	623729537	2.980000e-16	97.1
49	TraesCS1D01G138400	chr6B	79.389	131	24	3	473	602	707971771	707971643	4.980000e-14	89.8
50	TraesCS1D01G138400	chr6B	91.379	58	5	0	548	605	653314974	653314917	3.000000e-11	80.5
51	TraesCS1D01G138400	chr3A	88.312	77	4	3	1846	1922	333307254	333307325	1.790000e-13	87.9

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS1D01G138400	chr1D	189881248	189884871	3623	False	6693	6693	100.00000	1	3624	1	chr1D.!!$F1	3623
1	TraesCS1D01G138400	chr1A	167802175	167804874	2699	True	3893	3893	92.78200	920	3624	1	chr1A.!!$R2	2704
2	TraesCS1D01G138400	chr1B	263745374	263747931	2557	False	971	1683	95.27375	828	3624	4	chr1B.!!$F2	2796

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	End Stability	Orientation
432	433	0.034380	GTTAGGGTTTGGAGGGAGGC	60.034	60.0	4.70	F
585	586	0.034896	AGCGGGGCAGGATATTTACG	59.965	55.0	3.18	F
634	635	0.102481	CGCGTGGAGGCAGTAACTAT	59.898	55.0	2.12	F

Position	MSA Position	Penalty	Sequence	TM	GC	Hairpin	End Stability	Orientation
2272	2294	0.107654	ACAGACTTTCCTATGCCCGC	60.108	55.000	0.00	6.13	R
2539	2570	4.793731	TCGTTCTCGATCTCAAAGATTTCG	59.206	41.667	41.35	3.46	R
2646	2677	4.701765	ACCAAGAATAGCAGCATAGACAG	58.298	43.478	0.00	3.51	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
18	19	3.762674	GAAAGATCGGGACACCCTC	57.237	57.895	5.27	0.00	42.67	4.30
19	20	0.179108	GAAAGATCGGGACACCCTCG	60.179	60.000	5.27	0.00	42.67	4.63
20	21	2.240162	AAAGATCGGGACACCCTCGC	62.240	60.000	5.27	0.00	42.67	5.03
21	22	4.222847	GATCGGGACACCCTCGCC	62.223	72.222	5.27	0.00	42.67	5.54
31	32	4.896829	CCCTCGCCCTCGCCTCTA	62.897	72.222	0.00	0.00	35.26	2.43
32	33	2.598985	CCTCGCCCTCGCCTCTAT	60.599	66.667	0.00	0.00	35.26	1.98
33	34	2.631580	CCTCGCCCTCGCCTCTATC	61.632	68.421	0.00	0.00	35.26	2.08
34	35	1.899054	CTCGCCCTCGCCTCTATCA	60.899	63.158	0.00	0.00	35.26	2.15
35	36	1.455032	TCGCCCTCGCCTCTATCAA	60.455	57.895	0.00	0.00	35.26	2.57
36	37	1.006805	CGCCCTCGCCTCTATCAAG	60.007	63.158	0.00	0.00	0.00	3.02
37	38	1.456196	CGCCCTCGCCTCTATCAAGA	61.456	60.000	0.00	0.00	0.00	3.02
46	47	1.333177	CTCTATCAAGAGGGACCCGG	58.667	60.000	4.40	0.00	44.82	5.73
47	48	0.931468	TCTATCAAGAGGGACCCGGA	59.069	55.000	0.73	2.17	0.00	5.14
48	49	1.133450	TCTATCAAGAGGGACCCGGAG	60.133	57.143	0.73	0.00	0.00	4.63
61	62	3.032339	CGGAGGTCTAGTAGGCGC	58.968	66.667	0.00	0.00	0.00	6.53
62	63	2.894565	CGGAGGTCTAGTAGGCGCG	61.895	68.421	0.00	0.00	0.00	6.86
63	64	2.553727	GGAGGTCTAGTAGGCGCGG	61.554	68.421	8.83	0.00	0.00	6.46
64	65	1.823041	GAGGTCTAGTAGGCGCGGT	60.823	63.158	8.83	0.00	0.00	5.68
65	66	0.533755	GAGGTCTAGTAGGCGCGGTA	60.534	60.000	8.83	0.00	0.00	4.02
66	67	0.534652	AGGTCTAGTAGGCGCGGTAG	60.535	60.000	8.83	0.00	0.00	3.18
67	68	1.513836	GGTCTAGTAGGCGCGGTAGG	61.514	65.000	8.83	0.00	0.00	3.18
68	69	0.533755	GTCTAGTAGGCGCGGTAGGA	60.534	60.000	8.83	0.00	0.00	2.94
69	70	0.250209	TCTAGTAGGCGCGGTAGGAG	60.250	60.000	8.83	0.00	0.00	3.69
70	71	1.228063	TAGTAGGCGCGGTAGGAGG	60.228	63.158	8.83	0.00	0.00	4.30
71	72	2.687418	TAGTAGGCGCGGTAGGAGGG	62.687	65.000	8.83	0.00	0.00	4.30
72	73	4.133373	TAGGCGCGGTAGGAGGGT	62.133	66.667	8.83	0.00	0.00	4.34
75	76	3.537874	GCGCGGTAGGAGGGTGAT	61.538	66.667	8.83	0.00	0.00	3.06
76	77	2.417516	CGCGGTAGGAGGGTGATG	59.582	66.667	0.00	0.00	0.00	3.07
77	78	2.109181	GCGGTAGGAGGGTGATGC	59.891	66.667	0.00	0.00	0.00	3.91
78	79	2.731571	GCGGTAGGAGGGTGATGCA	61.732	63.158	0.00	0.00	0.00	3.96
79	80	1.443407	CGGTAGGAGGGTGATGCAG	59.557	63.158	0.00	0.00	0.00	4.41
80	81	1.330655	CGGTAGGAGGGTGATGCAGT	61.331	60.000	0.00	0.00	0.00	4.40
81	82	0.179000	GGTAGGAGGGTGATGCAGTG	59.821	60.000	0.00	0.00	0.00	3.66
82	83	0.462759	GTAGGAGGGTGATGCAGTGC	60.463	60.000	8.58	8.58	0.00	4.40
83	84	0.909133	TAGGAGGGTGATGCAGTGCA	60.909	55.000	22.22	22.22	44.86	4.57
84	85	1.748122	GGAGGGTGATGCAGTGCAG	60.748	63.158	24.20	0.00	43.65	4.41
85	86	1.748122	GAGGGTGATGCAGTGCAGG	60.748	63.158	24.20	0.00	43.65	4.85
86	87	2.189191	GAGGGTGATGCAGTGCAGGA	62.189	60.000	24.20	9.39	43.65	3.86
87	88	1.748122	GGGTGATGCAGTGCAGGAG	60.748	63.158	24.20	0.00	43.65	3.69
88	89	1.748122	GGTGATGCAGTGCAGGAGG	60.748	63.158	24.20	0.00	43.65	4.30
89	90	1.748122	GTGATGCAGTGCAGGAGGG	60.748	63.158	24.20	0.00	43.65	4.30
90	91	2.827642	GATGCAGTGCAGGAGGGC	60.828	66.667	24.20	4.70	43.65	5.19
91	92	4.437587	ATGCAGTGCAGGAGGGCC	62.438	66.667	24.20	0.00	43.65	5.80
102	103	4.083862	GAGGGCCCGGACAGTGTC	62.084	72.222	18.44	15.24	0.00	3.67
109	110	2.878429	CGGACAGTGTCGGAGAGG	59.122	66.667	22.65	2.50	36.95	3.69
110	111	1.674651	CGGACAGTGTCGGAGAGGA	60.675	63.158	22.65	0.00	36.95	3.71
111	112	1.884444	GGACAGTGTCGGAGAGGAC	59.116	63.158	16.89	0.00	36.95	3.85
112	113	1.596895	GGACAGTGTCGGAGAGGACC	61.597	65.000	16.89	0.00	36.95	4.46
113	114	0.894184	GACAGTGTCGGAGAGGACCA	60.894	60.000	7.68	0.00	36.95	4.02
114	115	0.469331	ACAGTGTCGGAGAGGACCAA	60.469	55.000	0.00	0.00	36.95	3.67
115	116	0.038159	CAGTGTCGGAGAGGACCAAC	60.038	60.000	0.00	0.00	36.95	3.77
116	117	1.186267	AGTGTCGGAGAGGACCAACC	61.186	60.000	0.00	0.00	36.95	3.77
117	118	2.273179	TGTCGGAGAGGACCAACCG	61.273	63.158	14.84	14.84	45.61	4.44
118	119	2.678934	TCGGAGAGGACCAACCGG	60.679	66.667	18.81	0.00	44.57	5.28
119	120	4.452733	CGGAGAGGACCAACCGGC	62.453	72.222	0.00	0.00	44.74	6.13
120	121	3.319198	GGAGAGGACCAACCGGCA	61.319	66.667	0.00	0.00	44.74	5.69
121	122	2.266055	GAGAGGACCAACCGGCAG	59.734	66.667	0.00	0.00	44.74	4.85
122	123	3.959991	GAGAGGACCAACCGGCAGC	62.960	68.421	0.00	0.00	44.74	5.25
123	124	4.329545	GAGGACCAACCGGCAGCA	62.330	66.667	0.00	0.00	44.74	4.41
124	125	4.643387	AGGACCAACCGGCAGCAC	62.643	66.667	0.00	0.00	44.74	4.40
125	126	4.947147	GGACCAACCGGCAGCACA	62.947	66.667	0.00	0.00	34.57	4.57
126	127	3.357079	GACCAACCGGCAGCACAG	61.357	66.667	0.00	0.00	34.57	3.66
127	128	4.954970	ACCAACCGGCAGCACAGG	62.955	66.667	0.00	0.00	39.94	4.00
158	159	4.776322	TCCATGGCGGCCGTGAAG	62.776	66.667	36.53	23.19	42.73	3.02
161	162	3.781307	ATGGCGGCCGTGAAGCTA	61.781	61.111	28.70	7.66	0.00	3.32
162	163	3.740128	ATGGCGGCCGTGAAGCTAG	62.740	63.158	28.70	0.00	0.00	3.42
165	166	3.771160	CGGCCGTGAAGCTAGGGT	61.771	66.667	19.50	0.00	0.00	4.34
166	167	2.669240	GGCCGTGAAGCTAGGGTT	59.331	61.111	0.00	0.00	0.00	4.11
167	168	1.902556	GGCCGTGAAGCTAGGGTTA	59.097	57.895	0.00	0.00	0.00	2.85
168	169	0.179081	GGCCGTGAAGCTAGGGTTAG	60.179	60.000	0.00	0.00	0.00	2.34
175	176	2.511403	GCTAGGGTTAGCCTGGGC	59.489	66.667	13.86	13.07	45.34	5.36
176	177	3.121406	GCTAGGGTTAGCCTGGGCC	62.121	68.421	13.86	0.00	45.34	5.80
177	178	2.766651	TAGGGTTAGCCTGGGCCG	60.767	66.667	13.86	0.00	43.17	6.13
178	179	3.320411	TAGGGTTAGCCTGGGCCGA	62.320	63.158	13.86	0.00	43.17	5.54
179	180	4.176752	GGGTTAGCCTGGGCCGAG	62.177	72.222	7.99	7.99	43.17	4.63
180	181	4.176752	GGTTAGCCTGGGCCGAGG	62.177	72.222	28.58	28.58	43.17	4.63
181	182	3.081409	GTTAGCCTGGGCCGAGGA	61.081	66.667	35.88	14.70	43.17	3.71
182	183	2.764128	TTAGCCTGGGCCGAGGAG	60.764	66.667	35.88	12.26	43.17	3.69
183	184	3.311511	TTAGCCTGGGCCGAGGAGA	62.312	63.158	35.88	19.84	43.17	3.71
207	208	4.832608	GGACACGGGTCGCATCCC	62.833	72.222	12.53	3.35	45.28	3.85
213	214	4.530857	GGGTCGCATCCCACCTCG	62.531	72.222	8.16	0.00	46.30	4.63
214	215	3.771160	GGTCGCATCCCACCTCGT	61.771	66.667	0.00	0.00	0.00	4.18
215	216	2.509336	GTCGCATCCCACCTCGTG	60.509	66.667	0.00	0.00	0.00	4.35
216	217	4.451150	TCGCATCCCACCTCGTGC	62.451	66.667	0.00	0.00	31.34	5.34
217	218	4.457496	CGCATCCCACCTCGTGCT	62.457	66.667	0.00	0.00	35.52	4.40
218	219	2.512515	GCATCCCACCTCGTGCTC	60.513	66.667	0.00	0.00	34.85	4.26
219	220	2.981302	CATCCCACCTCGTGCTCA	59.019	61.111	0.00	0.00	31.34	4.26
220	221	1.296392	CATCCCACCTCGTGCTCAA	59.704	57.895	0.00	0.00	31.34	3.02
221	222	1.021390	CATCCCACCTCGTGCTCAAC	61.021	60.000	0.00	0.00	31.34	3.18
222	223	1.480212	ATCCCACCTCGTGCTCAACA	61.480	55.000	0.00	0.00	31.34	3.33
223	224	1.227823	CCCACCTCGTGCTCAACAA	60.228	57.895	0.00	0.00	31.34	2.83
224	225	1.507141	CCCACCTCGTGCTCAACAAC	61.507	60.000	0.00	0.00	31.34	3.32
225	226	1.564622	CACCTCGTGCTCAACAACG	59.435	57.895	0.00	0.00	0.00	4.10
226	227	2.244651	ACCTCGTGCTCAACAACGC	61.245	57.895	0.00	0.00	0.00	4.84
227	228	2.168621	CTCGTGCTCAACAACGCG	59.831	61.111	3.53	3.53	40.97	6.01
228	229	3.893914	CTCGTGCTCAACAACGCGC	62.894	63.158	5.73	0.00	39.52	6.86
230	231	3.947841	GTGCTCAACAACGCGCCA	61.948	61.111	5.73	0.00	0.00	5.69
231	232	3.947841	TGCTCAACAACGCGCCAC	61.948	61.111	5.73	0.00	0.00	5.01
232	233	4.683334	GCTCAACAACGCGCCACC	62.683	66.667	5.73	0.00	0.00	4.61
233	234	3.276091	CTCAACAACGCGCCACCA	61.276	61.111	5.73	0.00	0.00	4.17
234	235	2.593148	TCAACAACGCGCCACCAT	60.593	55.556	5.73	0.00	0.00	3.55
235	236	2.428902	CAACAACGCGCCACCATG	60.429	61.111	5.73	0.00	0.00	3.66
236	237	4.341502	AACAACGCGCCACCATGC	62.342	61.111	5.73	0.00	0.00	4.06
255	256	4.803426	CGGGCTCGAGCTCACCAC	62.803	72.222	34.95	18.22	43.04	4.16
256	257	4.803426	GGGCTCGAGCTCACCACG	62.803	72.222	34.46	0.00	42.27	4.94
257	258	4.803426	GGCTCGAGCTCACCACGG	62.803	72.222	34.46	0.00	41.70	4.94
259	260	4.803426	CTCGAGCTCACCACGGCC	62.803	72.222	15.40	0.00	0.00	6.13
285	286	3.712881	GCTCACCAACGCGTCCAC	61.713	66.667	14.44	0.00	0.00	4.02
286	287	2.279851	CTCACCAACGCGTCCACA	60.280	61.111	14.44	0.00	0.00	4.17
287	288	2.586635	TCACCAACGCGTCCACAC	60.587	61.111	14.44	0.00	0.00	3.82
302	303	3.893763	CACGCCCGAGCTCGAGAT	61.894	66.667	36.59	10.84	43.02	2.75
303	304	3.587933	ACGCCCGAGCTCGAGATC	61.588	66.667	36.59	20.60	43.02	2.75
304	305	4.335584	CGCCCGAGCTCGAGATCC	62.336	72.222	36.59	17.39	43.02	3.36
305	306	3.219928	GCCCGAGCTCGAGATCCA	61.220	66.667	36.59	0.00	43.02	3.41
306	307	2.569354	GCCCGAGCTCGAGATCCAT	61.569	63.158	36.59	0.00	43.02	3.41
307	308	1.583986	CCCGAGCTCGAGATCCATC	59.416	63.158	36.59	8.26	43.02	3.51
308	309	1.208870	CCGAGCTCGAGATCCATCG	59.791	63.158	36.59	18.00	44.07	3.84
309	310	1.511318	CCGAGCTCGAGATCCATCGT	61.511	60.000	36.59	0.00	43.20	3.73
310	311	0.385348	CGAGCTCGAGATCCATCGTG	60.385	60.000	32.06	5.88	43.20	4.35
313	314	3.470520	CTCGAGATCCATCGTGCTC	57.529	57.895	6.58	0.00	43.20	4.26
314	315	0.665298	CTCGAGATCCATCGTGCTCA	59.335	55.000	6.58	0.00	43.20	4.26
315	316	0.382158	TCGAGATCCATCGTGCTCAC	59.618	55.000	4.51	0.00	43.20	3.51
316	317	0.596083	CGAGATCCATCGTGCTCACC	60.596	60.000	0.00	0.00	37.91	4.02
317	318	0.461548	GAGATCCATCGTGCTCACCA	59.538	55.000	0.00	0.00	0.00	4.17
318	319	1.069823	GAGATCCATCGTGCTCACCAT	59.930	52.381	0.00	0.00	0.00	3.55
319	320	1.069823	AGATCCATCGTGCTCACCATC	59.930	52.381	0.00	0.00	0.00	3.51
320	321	0.249615	ATCCATCGTGCTCACCATCG	60.250	55.000	0.00	0.00	0.00	3.84
321	322	1.141665	CCATCGTGCTCACCATCGA	59.858	57.895	0.00	0.00	33.72	3.59
322	323	0.873312	CCATCGTGCTCACCATCGAG	60.873	60.000	0.00	0.00	33.08	4.04
348	349	2.685380	CCCCTCGACCCTGAGCTT	60.685	66.667	0.00	0.00	34.56	3.74
349	350	2.581354	CCCTCGACCCTGAGCTTG	59.419	66.667	0.00	0.00	34.56	4.01
350	351	2.581354	CCTCGACCCTGAGCTTGG	59.419	66.667	0.00	0.00	34.56	3.61
351	352	2.286523	CCTCGACCCTGAGCTTGGT	61.287	63.158	3.43	3.43	37.64	3.67
352	353	1.216710	CTCGACCCTGAGCTTGGTC	59.783	63.158	16.83	16.83	46.15	4.02
354	355	3.377656	GACCCTGAGCTTGGTCGA	58.622	61.111	13.26	0.00	41.48	4.20
355	356	1.901085	GACCCTGAGCTTGGTCGAT	59.099	57.895	13.26	0.00	41.48	3.59
356	357	0.179097	GACCCTGAGCTTGGTCGATC	60.179	60.000	13.26	0.00	41.48	3.69
357	358	0.904865	ACCCTGAGCTTGGTCGATCA	60.905	55.000	0.00	0.00	0.00	2.92
358	359	0.179089	CCCTGAGCTTGGTCGATCAG	60.179	60.000	0.00	1.17	44.69	2.90
359	360	3.359194	CTGAGCTTGGTCGATCAGG	57.641	57.895	2.91	2.91	42.19	3.86
360	361	0.809241	CTGAGCTTGGTCGATCAGGC	60.809	60.000	24.01	24.01	42.19	4.85
361	362	1.880340	GAGCTTGGTCGATCAGGCG	60.880	63.158	24.84	7.18	43.31	5.52
362	363	2.892425	GCTTGGTCGATCAGGCGG	60.892	66.667	17.54	1.64	30.43	6.13
363	364	2.579201	CTTGGTCGATCAGGCGGT	59.421	61.111	0.00	0.00	0.00	5.68
364	365	1.519455	CTTGGTCGATCAGGCGGTC	60.519	63.158	0.00	0.00	0.00	4.79
365	366	1.949847	CTTGGTCGATCAGGCGGTCT	61.950	60.000	0.00	0.00	0.00	3.85
366	367	2.105128	GGTCGATCAGGCGGTCTG	59.895	66.667	2.46	2.46	44.68	3.51
379	380	4.803426	GTCTGAGGACCGGCAGCG	62.803	72.222	0.00	0.00	36.53	5.18
407	408	4.065281	CGGCCTCCTCGTCGGTTT	62.065	66.667	0.00	0.00	0.00	3.27
408	409	2.125633	GGCCTCCTCGTCGGTTTC	60.126	66.667	0.00	0.00	0.00	2.78
409	410	2.647158	GGCCTCCTCGTCGGTTTCT	61.647	63.158	0.00	0.00	0.00	2.52
410	411	1.318158	GGCCTCCTCGTCGGTTTCTA	61.318	60.000	0.00	0.00	0.00	2.10
411	412	0.100861	GCCTCCTCGTCGGTTTCTAG	59.899	60.000	0.00	0.00	0.00	2.43
412	413	0.739561	CCTCCTCGTCGGTTTCTAGG	59.260	60.000	0.00	0.00	0.00	3.02
413	414	0.739561	CTCCTCGTCGGTTTCTAGGG	59.260	60.000	0.00	0.00	0.00	3.53
414	415	0.038744	TCCTCGTCGGTTTCTAGGGT	59.961	55.000	0.00	0.00	0.00	4.34
415	416	0.893447	CCTCGTCGGTTTCTAGGGTT	59.107	55.000	0.00	0.00	0.00	4.11
416	417	2.094675	CCTCGTCGGTTTCTAGGGTTA	58.905	52.381	0.00	0.00	0.00	2.85
417	418	2.098770	CCTCGTCGGTTTCTAGGGTTAG	59.901	54.545	0.00	0.00	0.00	2.34
418	419	2.094675	TCGTCGGTTTCTAGGGTTAGG	58.905	52.381	0.00	0.00	0.00	2.69
419	420	1.135721	CGTCGGTTTCTAGGGTTAGGG	59.864	57.143	0.00	0.00	0.00	3.53
420	421	2.182827	GTCGGTTTCTAGGGTTAGGGT	58.817	52.381	0.00	0.00	0.00	4.34
421	422	2.568956	GTCGGTTTCTAGGGTTAGGGTT	59.431	50.000	0.00	0.00	0.00	4.11
422	423	3.008375	GTCGGTTTCTAGGGTTAGGGTTT	59.992	47.826	0.00	0.00	0.00	3.27
423	424	3.008266	TCGGTTTCTAGGGTTAGGGTTTG	59.992	47.826	0.00	0.00	0.00	2.93
424	425	3.693807	GGTTTCTAGGGTTAGGGTTTGG	58.306	50.000	0.00	0.00	0.00	3.28
425	426	3.331591	GGTTTCTAGGGTTAGGGTTTGGA	59.668	47.826	0.00	0.00	0.00	3.53
426	427	4.567116	GGTTTCTAGGGTTAGGGTTTGGAG	60.567	50.000	0.00	0.00	0.00	3.86
427	428	2.841795	TCTAGGGTTAGGGTTTGGAGG	58.158	52.381	0.00	0.00	0.00	4.30
428	429	1.844497	CTAGGGTTAGGGTTTGGAGGG	59.156	57.143	0.00	0.00	0.00	4.30
429	430	0.197661	AGGGTTAGGGTTTGGAGGGA	59.802	55.000	0.00	0.00	0.00	4.20
430	431	0.624254	GGGTTAGGGTTTGGAGGGAG	59.376	60.000	0.00	0.00	0.00	4.30
431	432	0.624254	GGTTAGGGTTTGGAGGGAGG	59.376	60.000	0.00	0.00	0.00	4.30
432	433	0.034380	GTTAGGGTTTGGAGGGAGGC	60.034	60.000	0.00	0.00	0.00	4.70
433	434	0.476808	TTAGGGTTTGGAGGGAGGCA	60.477	55.000	0.00	0.00	0.00	4.75
434	435	0.914417	TAGGGTTTGGAGGGAGGCAG	60.914	60.000	0.00	0.00	0.00	4.85
435	436	2.356667	GGTTTGGAGGGAGGCAGG	59.643	66.667	0.00	0.00	0.00	4.85
436	437	2.356667	GTTTGGAGGGAGGCAGGG	59.643	66.667	0.00	0.00	0.00	4.45
437	438	2.941025	TTTGGAGGGAGGCAGGGG	60.941	66.667	0.00	0.00	0.00	4.79
453	454	4.095400	GGGAGGGAGGCAGGGAGA	62.095	72.222	0.00	0.00	0.00	3.71
454	455	2.445654	GGAGGGAGGCAGGGAGAG	60.446	72.222	0.00	0.00	0.00	3.20
455	456	2.445654	GAGGGAGGCAGGGAGAGG	60.446	72.222	0.00	0.00	0.00	3.69
456	457	2.955246	AGGGAGGCAGGGAGAGGA	60.955	66.667	0.00	0.00	0.00	3.71
457	458	2.041265	GGGAGGCAGGGAGAGGAA	59.959	66.667	0.00	0.00	0.00	3.36
458	459	2.069430	GGGAGGCAGGGAGAGGAAG	61.069	68.421	0.00	0.00	0.00	3.46
459	460	2.069430	GGAGGCAGGGAGAGGAAGG	61.069	68.421	0.00	0.00	0.00	3.46
460	461	2.041928	AGGCAGGGAGAGGAAGGG	59.958	66.667	0.00	0.00	0.00	3.95
461	462	2.041265	GGCAGGGAGAGGAAGGGA	59.959	66.667	0.00	0.00	0.00	4.20
462	463	2.069430	GGCAGGGAGAGGAAGGGAG	61.069	68.421	0.00	0.00	0.00	4.30
463	464	1.002274	GCAGGGAGAGGAAGGGAGA	59.998	63.158	0.00	0.00	0.00	3.71
464	465	1.048160	GCAGGGAGAGGAAGGGAGAG	61.048	65.000	0.00	0.00	0.00	3.20
465	466	0.633921	CAGGGAGAGGAAGGGAGAGA	59.366	60.000	0.00	0.00	0.00	3.10
466	467	0.933700	AGGGAGAGGAAGGGAGAGAG	59.066	60.000	0.00	0.00	0.00	3.20
467	468	0.930726	GGGAGAGGAAGGGAGAGAGA	59.069	60.000	0.00	0.00	0.00	3.10
468	469	1.133482	GGGAGAGGAAGGGAGAGAGAG	60.133	61.905	0.00	0.00	0.00	3.20
469	470	1.133482	GGAGAGGAAGGGAGAGAGAGG	60.133	61.905	0.00	0.00	0.00	3.69
470	471	0.933700	AGAGGAAGGGAGAGAGAGGG	59.066	60.000	0.00	0.00	0.00	4.30
471	472	0.930726	GAGGAAGGGAGAGAGAGGGA	59.069	60.000	0.00	0.00	0.00	4.20
472	473	0.933700	AGGAAGGGAGAGAGAGGGAG	59.066	60.000	0.00	0.00	0.00	4.30
473	474	0.759060	GGAAGGGAGAGAGAGGGAGC	60.759	65.000	0.00	0.00	0.00	4.70
474	475	1.076339	AAGGGAGAGAGAGGGAGCG	60.076	63.158	0.00	0.00	0.00	5.03
475	476	2.520741	GGGAGAGAGAGGGAGCGG	60.521	72.222	0.00	0.00	0.00	5.52
476	477	3.223589	GGAGAGAGAGGGAGCGGC	61.224	72.222	0.00	0.00	0.00	6.53
477	478	3.591835	GAGAGAGAGGGAGCGGCG	61.592	72.222	0.51	0.51	0.00	6.46
494	495	2.202663	GCGAGTGCGAGAGATGCA	60.203	61.111	0.00	0.00	40.82	3.96
495	496	1.591059	GCGAGTGCGAGAGATGCAT	60.591	57.895	0.00	0.00	45.34	3.96
496	497	1.819226	GCGAGTGCGAGAGATGCATG	61.819	60.000	2.46	0.00	45.34	4.06
497	498	1.213733	CGAGTGCGAGAGATGCATGG	61.214	60.000	2.46	0.00	45.34	3.66
498	499	0.879400	GAGTGCGAGAGATGCATGGG	60.879	60.000	2.46	0.00	45.34	4.00
499	500	2.203112	TGCGAGAGATGCATGGGC	60.203	61.111	2.46	0.16	37.44	5.36
500	501	3.344215	GCGAGAGATGCATGGGCG	61.344	66.667	2.46	3.57	45.35	6.13
501	502	2.107750	CGAGAGATGCATGGGCGT	59.892	61.111	2.46	0.00	45.35	5.68
502	503	1.522355	CGAGAGATGCATGGGCGTT	60.522	57.895	2.46	0.00	45.35	4.84
503	504	1.769098	CGAGAGATGCATGGGCGTTG	61.769	60.000	2.46	0.00	45.35	4.10
504	505	1.442526	GAGAGATGCATGGGCGTTGG	61.443	60.000	2.46	0.00	45.35	3.77
505	506	2.440796	AGATGCATGGGCGTTGGG	60.441	61.111	2.46	0.00	45.35	4.12
506	507	2.755469	GATGCATGGGCGTTGGGT	60.755	61.111	2.46	0.00	45.35	4.51
507	508	2.283821	ATGCATGGGCGTTGGGTT	60.284	55.556	0.00	0.00	45.35	4.11
508	509	2.283472	GATGCATGGGCGTTGGGTTC	62.283	60.000	2.46	0.00	45.35	3.62
509	510	2.676471	GCATGGGCGTTGGGTTCT	60.676	61.111	0.00	0.00	0.00	3.01
510	511	2.700773	GCATGGGCGTTGGGTTCTC	61.701	63.158	0.00	0.00	0.00	2.87
511	512	2.046285	CATGGGCGTTGGGTTCTCC	61.046	63.158	0.00	0.00	0.00	3.71
512	513	2.534396	ATGGGCGTTGGGTTCTCCA	61.534	57.895	0.00	0.00	45.43	3.86
525	526	4.087892	CTCCACGGGAGCCACTGG	62.088	72.222	6.97	0.00	43.29	4.00
528	529	3.953775	CACGGGAGCCACTGGGTT	61.954	66.667	0.16	0.00	36.17	4.11
529	530	3.637273	ACGGGAGCCACTGGGTTC	61.637	66.667	0.16	0.00	43.21	3.62
530	531	3.322466	CGGGAGCCACTGGGTTCT	61.322	66.667	5.50	0.00	43.44	3.01
531	532	2.895424	CGGGAGCCACTGGGTTCTT	61.895	63.158	5.50	0.00	43.44	2.52
532	533	1.550130	CGGGAGCCACTGGGTTCTTA	61.550	60.000	5.50	0.00	43.44	2.10
533	534	0.919710	GGGAGCCACTGGGTTCTTAT	59.080	55.000	5.50	0.00	43.44	1.73
534	535	2.124411	GGGAGCCACTGGGTTCTTATA	58.876	52.381	5.50	0.00	43.44	0.98
535	536	2.711547	GGGAGCCACTGGGTTCTTATAT	59.288	50.000	5.50	0.00	43.44	0.86
536	537	3.496870	GGGAGCCACTGGGTTCTTATATG	60.497	52.174	5.50	0.00	43.44	1.78
537	538	3.142174	GAGCCACTGGGTTCTTATATGC	58.858	50.000	0.16	0.00	40.93	3.14
538	539	2.158608	AGCCACTGGGTTCTTATATGCC	60.159	50.000	0.00	0.00	36.17	4.40
539	540	2.158608	GCCACTGGGTTCTTATATGCCT	60.159	50.000	0.00	0.00	36.17	4.75
540	541	3.480470	CCACTGGGTTCTTATATGCCTG	58.520	50.000	0.00	0.00	0.00	4.85
541	542	2.880890	CACTGGGTTCTTATATGCCTGC	59.119	50.000	0.00	0.00	0.00	4.85
542	543	2.146342	CTGGGTTCTTATATGCCTGCG	58.854	52.381	0.00	0.00	0.00	5.18
543	544	0.875059	GGGTTCTTATATGCCTGCGC	59.125	55.000	0.00	0.00	0.00	6.09
544	545	0.512952	GGTTCTTATATGCCTGCGCG	59.487	55.000	0.00	0.00	38.08	6.86
545	546	0.110644	GTTCTTATATGCCTGCGCGC	60.111	55.000	27.26	27.26	38.08	6.86
546	547	0.531753	TTCTTATATGCCTGCGCGCA	60.532	50.000	34.12	34.12	44.35	6.09
547	548	0.531753	TCTTATATGCCTGCGCGCAA	60.532	50.000	35.50	21.57	43.24	4.85
548	549	0.307453	CTTATATGCCTGCGCGCAAA	59.693	50.000	35.50	23.16	43.24	3.68
549	550	0.735471	TTATATGCCTGCGCGCAAAA	59.265	45.000	35.50	22.78	43.24	2.44
550	551	0.950836	TATATGCCTGCGCGCAAAAT	59.049	45.000	35.50	27.33	43.24	1.82
551	552	0.595567	ATATGCCTGCGCGCAAAATG	60.596	50.000	35.50	22.66	43.24	2.32
552	553	1.652167	TATGCCTGCGCGCAAAATGA	61.652	50.000	35.50	17.49	43.24	2.57
553	554	3.174573	GCCTGCGCGCAAAATGAC	61.175	61.111	35.50	12.29	0.00	3.06
554	555	2.871080	CCTGCGCGCAAAATGACG	60.871	61.111	35.50	20.72	0.00	4.35
555	556	2.173141	CTGCGCGCAAAATGACGA	59.827	55.556	35.50	8.69	0.00	4.20
556	557	1.440188	CTGCGCGCAAAATGACGAA	60.440	52.632	35.50	7.85	0.00	3.85
557	558	0.996229	CTGCGCGCAAAATGACGAAA	60.996	50.000	35.50	7.26	0.00	3.46
558	559	0.592500	TGCGCGCAAAATGACGAAAA	60.593	45.000	34.66	2.25	0.00	2.29
559	560	0.707822	GCGCGCAAAATGACGAAAAT	59.292	45.000	29.10	0.00	0.00	1.82
560	561	1.522813	GCGCGCAAAATGACGAAAATG	60.523	47.619	29.10	0.00	0.00	2.32
561	562	1.522813	CGCGCAAAATGACGAAAATGC	60.523	47.619	8.75	0.00	0.00	3.56
562	563	1.201801	GCGCAAAATGACGAAAATGCC	60.202	47.619	0.30	0.00	0.00	4.40
563	564	1.389784	CGCAAAATGACGAAAATGCCC	59.610	47.619	0.00	0.00	0.00	5.36
564	565	2.687370	GCAAAATGACGAAAATGCCCT	58.313	42.857	0.00	0.00	0.00	5.19
565	566	2.667969	GCAAAATGACGAAAATGCCCTC	59.332	45.455	0.00	0.00	0.00	4.30
566	567	3.860378	GCAAAATGACGAAAATGCCCTCA	60.860	43.478	0.00	0.00	0.00	3.86
567	568	3.855689	AAATGACGAAAATGCCCTCAG	57.144	42.857	0.00	0.00	0.00	3.35
568	569	1.098050	ATGACGAAAATGCCCTCAGC	58.902	50.000	0.00	0.00	44.14	4.26
579	580	2.844362	CCTCAGCGGGGCAGGATA	60.844	66.667	0.00	0.00	0.00	2.59
580	581	2.219875	CCTCAGCGGGGCAGGATAT	61.220	63.158	0.00	0.00	0.00	1.63
581	582	1.757306	CTCAGCGGGGCAGGATATT	59.243	57.895	0.00	0.00	0.00	1.28
582	583	0.109342	CTCAGCGGGGCAGGATATTT	59.891	55.000	0.00	0.00	0.00	1.40
583	584	1.347707	CTCAGCGGGGCAGGATATTTA	59.652	52.381	0.00	0.00	0.00	1.40
584	585	1.071699	TCAGCGGGGCAGGATATTTAC	59.928	52.381	0.00	0.00	0.00	2.01
585	586	0.034896	AGCGGGGCAGGATATTTACG	59.965	55.000	0.00	0.00	0.00	3.18
586	587	1.574702	GCGGGGCAGGATATTTACGC	61.575	60.000	0.00	0.00	38.94	4.42
587	588	1.289109	CGGGGCAGGATATTTACGCG	61.289	60.000	3.53	3.53	0.00	6.01
588	589	1.574702	GGGGCAGGATATTTACGCGC	61.575	60.000	5.73	0.00	35.05	6.86
589	590	1.491563	GGCAGGATATTTACGCGCG	59.508	57.895	30.96	30.96	0.00	6.86
590	591	1.491563	GCAGGATATTTACGCGCGG	59.508	57.895	35.22	16.31	0.00	6.46
591	592	1.219522	GCAGGATATTTACGCGCGGT	61.220	55.000	35.22	21.38	0.00	5.68
592	593	0.506932	CAGGATATTTACGCGCGGTG	59.493	55.000	35.22	7.05	0.00	4.94
593	594	0.599204	AGGATATTTACGCGCGGTGG	60.599	55.000	35.22	6.61	0.00	4.61
594	595	1.203313	GATATTTACGCGCGGTGGC	59.797	57.895	35.22	12.37	0.00	5.01
595	596	1.492319	GATATTTACGCGCGGTGGCA	61.492	55.000	35.22	16.34	39.92	4.92
596	597	1.768112	ATATTTACGCGCGGTGGCAC	61.768	55.000	35.22	9.70	39.92	5.01
629	630	4.435436	CAGCGCGTGGAGGCAGTA	62.435	66.667	8.43	0.00	0.00	2.74
630	631	3.691342	AGCGCGTGGAGGCAGTAA	61.691	61.111	8.43	0.00	0.00	2.24
631	632	3.488090	GCGCGTGGAGGCAGTAAC	61.488	66.667	8.43	0.00	0.00	2.50
632	633	2.261671	CGCGTGGAGGCAGTAACT	59.738	61.111	0.00	0.00	0.00	2.24
633	634	1.509463	CGCGTGGAGGCAGTAACTA	59.491	57.895	0.00	0.00	0.00	2.24
634	635	0.102481	CGCGTGGAGGCAGTAACTAT	59.898	55.000	0.00	0.00	0.00	2.12
635	636	1.470979	CGCGTGGAGGCAGTAACTATT	60.471	52.381	0.00	0.00	0.00	1.73
636	637	2.202566	GCGTGGAGGCAGTAACTATTC	58.797	52.381	0.00	0.00	0.00	1.75
637	638	2.418197	GCGTGGAGGCAGTAACTATTCA	60.418	50.000	0.00	0.00	0.00	2.57
638	639	3.741388	GCGTGGAGGCAGTAACTATTCAT	60.741	47.826	0.00	0.00	0.00	2.57
639	640	4.442706	CGTGGAGGCAGTAACTATTCATT	58.557	43.478	0.00	0.00	0.00	2.57
640	641	4.876107	CGTGGAGGCAGTAACTATTCATTT	59.124	41.667	0.00	0.00	0.00	2.32
641	642	5.006746	CGTGGAGGCAGTAACTATTCATTTC	59.993	44.000	0.00	0.00	0.00	2.17
642	643	6.116126	GTGGAGGCAGTAACTATTCATTTCT	58.884	40.000	0.00	0.00	0.00	2.52
643	644	7.272978	GTGGAGGCAGTAACTATTCATTTCTA	58.727	38.462	0.00	0.00	0.00	2.10
644	645	7.934120	GTGGAGGCAGTAACTATTCATTTCTAT	59.066	37.037	0.00	0.00	0.00	1.98
645	646	9.154632	TGGAGGCAGTAACTATTCATTTCTATA	57.845	33.333	0.00	0.00	0.00	1.31
646	647	9.646427	GGAGGCAGTAACTATTCATTTCTATAG	57.354	37.037	0.00	0.00	0.00	1.31
648	649	9.988815	AGGCAGTAACTATTCATTTCTATAGTG	57.011	33.333	0.00	0.00	37.57	2.74
649	650	8.713271	GGCAGTAACTATTCATTTCTATAGTGC	58.287	37.037	0.00	0.00	37.57	4.40
650	651	8.713271	GCAGTAACTATTCATTTCTATAGTGCC	58.287	37.037	0.00	0.00	37.57	5.01
651	652	9.209175	CAGTAACTATTCATTTCTATAGTGCCC	57.791	37.037	0.00	0.00	37.57	5.36
652	653	8.934697	AGTAACTATTCATTTCTATAGTGCCCA	58.065	33.333	0.00	0.00	37.57	5.36
653	654	9.726438	GTAACTATTCATTTCTATAGTGCCCAT	57.274	33.333	0.00	0.00	37.57	4.00
654	655	8.854614	AACTATTCATTTCTATAGTGCCCATC	57.145	34.615	0.00	0.00	37.57	3.51
655	656	7.398024	ACTATTCATTTCTATAGTGCCCATCC	58.602	38.462	0.00	0.00	36.49	3.51
656	657	4.640771	TCATTTCTATAGTGCCCATCCC	57.359	45.455	0.00	0.00	0.00	3.85
657	658	3.980022	TCATTTCTATAGTGCCCATCCCA	59.020	43.478	0.00	0.00	0.00	4.37
658	659	4.042062	TCATTTCTATAGTGCCCATCCCAG	59.958	45.833	0.00	0.00	0.00	4.45
659	660	3.344535	TTCTATAGTGCCCATCCCAGA	57.655	47.619	0.00	0.00	0.00	3.86
660	661	3.567375	TCTATAGTGCCCATCCCAGAT	57.433	47.619	0.00	0.00	0.00	2.90
661	662	3.445008	TCTATAGTGCCCATCCCAGATC	58.555	50.000	0.00	0.00	0.00	2.75
662	663	1.366319	ATAGTGCCCATCCCAGATCC	58.634	55.000	0.00	0.00	0.00	3.36
663	664	1.121407	TAGTGCCCATCCCAGATCCG	61.121	60.000	0.00	0.00	0.00	4.18
664	665	2.040988	TGCCCATCCCAGATCCGA	60.041	61.111	0.00	0.00	0.00	4.55
665	666	2.427753	GCCCATCCCAGATCCGAC	59.572	66.667	0.00	0.00	0.00	4.79
666	667	2.737180	CCCATCCCAGATCCGACG	59.263	66.667	0.00	0.00	0.00	5.12
667	668	2.737180	CCATCCCAGATCCGACGG	59.263	66.667	7.84	7.84	0.00	4.79
668	669	2.029666	CATCCCAGATCCGACGGC	59.970	66.667	9.66	0.00	0.00	5.68
669	670	3.234730	ATCCCAGATCCGACGGCC	61.235	66.667	9.66	3.31	0.00	6.13
670	671	3.758133	ATCCCAGATCCGACGGCCT	62.758	63.158	9.66	5.88	0.00	5.19
671	672	2.367586	ATCCCAGATCCGACGGCCTA	62.368	60.000	9.66	0.00	0.00	3.93
672	673	2.565645	CCCAGATCCGACGGCCTAG	61.566	68.421	9.66	1.86	0.00	3.02
673	674	2.336809	CAGATCCGACGGCCTAGC	59.663	66.667	9.66	0.00	0.00	3.42
674	675	2.196229	AGATCCGACGGCCTAGCT	59.804	61.111	9.66	0.00	0.00	3.32
675	676	1.899534	AGATCCGACGGCCTAGCTC	60.900	63.158	9.66	0.00	0.00	4.09
676	677	1.899534	GATCCGACGGCCTAGCTCT	60.900	63.158	9.66	0.00	0.00	4.09
677	678	1.455959	ATCCGACGGCCTAGCTCTT	60.456	57.895	9.66	0.00	0.00	2.85
678	679	1.457009	ATCCGACGGCCTAGCTCTTC	61.457	60.000	9.66	0.00	0.00	2.87
679	680	2.413765	CGACGGCCTAGCTCTTCC	59.586	66.667	0.00	0.00	0.00	3.46
680	681	2.415608	CGACGGCCTAGCTCTTCCA	61.416	63.158	0.00	0.00	0.00	3.53
681	682	1.142097	GACGGCCTAGCTCTTCCAC	59.858	63.158	0.00	0.00	0.00	4.02
682	683	2.105128	CGGCCTAGCTCTTCCACG	59.895	66.667	0.00	0.00	0.00	4.94
683	684	2.202946	GGCCTAGCTCTTCCACGC	60.203	66.667	0.00	0.00	0.00	5.34
684	685	2.583593	GCCTAGCTCTTCCACGCG	60.584	66.667	3.53	3.53	0.00	6.01
685	686	2.583593	CCTAGCTCTTCCACGCGC	60.584	66.667	5.73	0.00	0.00	6.86
686	687	2.492090	CTAGCTCTTCCACGCGCT	59.508	61.111	5.73	0.00	36.56	5.92
687	688	1.587613	CTAGCTCTTCCACGCGCTC	60.588	63.158	5.73	0.00	34.14	5.03
688	689	2.271607	CTAGCTCTTCCACGCGCTCA	62.272	60.000	5.73	0.00	34.14	4.26
689	690	1.873270	TAGCTCTTCCACGCGCTCAA	61.873	55.000	5.73	0.00	34.14	3.02
690	691	2.103042	GCTCTTCCACGCGCTCAAT	61.103	57.895	5.73	0.00	0.00	2.57
691	692	2.002127	CTCTTCCACGCGCTCAATC	58.998	57.895	5.73	0.00	0.00	2.67
692	693	1.746727	CTCTTCCACGCGCTCAATCG	61.747	60.000	5.73	0.00	0.00	3.34
693	694	2.802667	CTTCCACGCGCTCAATCGG	61.803	63.158	5.73	0.00	0.00	4.18
696	697	4.214383	CACGCGCTCAATCGGCTG	62.214	66.667	5.73	0.00	0.00	4.85
700	701	2.106938	CGCTCAATCGGCTGCCTA	59.893	61.111	17.92	6.17	0.00	3.93
701	702	1.521457	CGCTCAATCGGCTGCCTAA	60.521	57.895	17.92	5.01	0.00	2.69
702	703	1.089481	CGCTCAATCGGCTGCCTAAA	61.089	55.000	17.92	2.22	0.00	1.85
703	704	1.094785	GCTCAATCGGCTGCCTAAAA	58.905	50.000	17.92	0.00	0.00	1.52
704	705	1.202188	GCTCAATCGGCTGCCTAAAAC	60.202	52.381	17.92	0.00	0.00	2.43
705	706	2.359900	CTCAATCGGCTGCCTAAAACT	58.640	47.619	17.92	0.00	0.00	2.66
706	707	2.352960	CTCAATCGGCTGCCTAAAACTC	59.647	50.000	17.92	0.00	0.00	3.01
707	708	2.083774	CAATCGGCTGCCTAAAACTCA	58.916	47.619	17.92	0.00	0.00	3.41
708	709	2.684881	CAATCGGCTGCCTAAAACTCAT	59.315	45.455	17.92	0.00	0.00	2.90
709	710	2.024176	TCGGCTGCCTAAAACTCATC	57.976	50.000	17.92	0.00	0.00	2.92
710	711	1.277842	TCGGCTGCCTAAAACTCATCA	59.722	47.619	17.92	0.00	0.00	3.07
711	712	2.083774	CGGCTGCCTAAAACTCATCAA	58.916	47.619	17.92	0.00	0.00	2.57
712	713	2.096496	CGGCTGCCTAAAACTCATCAAG	59.904	50.000	17.92	0.00	0.00	3.02
713	714	2.159324	GGCTGCCTAAAACTCATCAAGC	60.159	50.000	12.43	0.00	0.00	4.01
714	715	2.489329	GCTGCCTAAAACTCATCAAGCA	59.511	45.455	0.00	0.00	0.00	3.91
715	716	3.057315	GCTGCCTAAAACTCATCAAGCAA	60.057	43.478	0.00	0.00	0.00	3.91
716	717	4.559300	GCTGCCTAAAACTCATCAAGCAAA	60.559	41.667	0.00	0.00	0.00	3.68
717	718	4.870363	TGCCTAAAACTCATCAAGCAAAC	58.130	39.130	0.00	0.00	0.00	2.93
718	719	3.914364	GCCTAAAACTCATCAAGCAAACG	59.086	43.478	0.00	0.00	0.00	3.60
719	720	4.320202	GCCTAAAACTCATCAAGCAAACGA	60.320	41.667	0.00	0.00	0.00	3.85
720	721	5.757886	CCTAAAACTCATCAAGCAAACGAA	58.242	37.500	0.00	0.00	0.00	3.85
721	722	6.381801	CCTAAAACTCATCAAGCAAACGAAT	58.618	36.000	0.00	0.00	0.00	3.34
722	723	6.524586	CCTAAAACTCATCAAGCAAACGAATC	59.475	38.462	0.00	0.00	0.00	2.52
723	724	4.425577	AACTCATCAAGCAAACGAATCC	57.574	40.909	0.00	0.00	0.00	3.01
724	725	2.416547	ACTCATCAAGCAAACGAATCCG	59.583	45.455	0.00	0.00	42.50	4.18
725	726	2.672874	CTCATCAAGCAAACGAATCCGA	59.327	45.455	0.00	0.00	39.50	4.55
726	727	2.415168	TCATCAAGCAAACGAATCCGAC	59.585	45.455	0.00	0.00	39.50	4.79
727	728	0.787787	TCAAGCAAACGAATCCGACG	59.212	50.000	0.00	0.00	39.50	5.12
728	729	0.179225	CAAGCAAACGAATCCGACGG	60.179	55.000	7.84	7.84	39.50	4.79
729	730	1.908066	AAGCAAACGAATCCGACGGC	61.908	55.000	9.66	0.00	39.50	5.68
730	731	2.782615	CAAACGAATCCGACGGCC	59.217	61.111	9.66	0.00	39.50	6.13
731	732	2.435410	AAACGAATCCGACGGCCC	60.435	61.111	9.66	0.00	39.50	5.80
732	733	3.242897	AAACGAATCCGACGGCCCA	62.243	57.895	9.66	0.00	39.50	5.36
733	734	3.945304	AACGAATCCGACGGCCCAC	62.945	63.158	9.66	0.00	39.50	4.61
745	746	4.521062	GCCCACGATCGCTGAGCT	62.521	66.667	16.60	0.00	0.00	4.09
746	747	2.279120	CCCACGATCGCTGAGCTC	60.279	66.667	16.60	6.82	0.00	4.09
747	748	2.780094	CCCACGATCGCTGAGCTCT	61.780	63.158	16.60	0.00	0.00	4.09
748	749	1.588403	CCACGATCGCTGAGCTCTG	60.588	63.158	16.60	15.96	0.00	3.35
749	750	1.431036	CACGATCGCTGAGCTCTGA	59.569	57.895	23.35	14.45	0.00	3.27
750	751	0.591994	CACGATCGCTGAGCTCTGAG	60.592	60.000	23.35	19.82	0.00	3.35
751	752	1.008652	CGATCGCTGAGCTCTGAGG	60.009	63.158	23.35	13.87	0.00	3.86
752	753	1.443322	CGATCGCTGAGCTCTGAGGA	61.443	60.000	23.35	18.16	0.00	3.71
753	754	0.311790	GATCGCTGAGCTCTGAGGAG	59.688	60.000	23.35	9.11	42.18	3.69
754	755	1.108727	ATCGCTGAGCTCTGAGGAGG	61.109	60.000	23.35	7.13	39.80	4.30
755	756	2.500646	GCTGAGCTCTGAGGAGGC	59.499	66.667	23.35	8.40	39.80	4.70
756	757	2.059786	GCTGAGCTCTGAGGAGGCT	61.060	63.158	23.35	0.00	39.80	4.58
757	758	1.616091	GCTGAGCTCTGAGGAGGCTT	61.616	60.000	23.35	0.00	39.80	4.35
758	759	0.176219	CTGAGCTCTGAGGAGGCTTG	59.824	60.000	16.19	0.00	39.80	4.01
759	760	0.543883	TGAGCTCTGAGGAGGCTTGT	60.544	55.000	16.19	0.00	39.80	3.16
760	761	1.272704	TGAGCTCTGAGGAGGCTTGTA	60.273	52.381	16.19	0.00	39.80	2.41
761	762	1.827969	GAGCTCTGAGGAGGCTTGTAA	59.172	52.381	6.43	0.00	39.80	2.41
762	763	2.234908	GAGCTCTGAGGAGGCTTGTAAA	59.765	50.000	6.43	0.00	39.80	2.01
763	764	2.639839	AGCTCTGAGGAGGCTTGTAAAA	59.360	45.455	6.83	0.00	39.80	1.52
764	765	3.073062	AGCTCTGAGGAGGCTTGTAAAAA	59.927	43.478	6.83	0.00	39.80	1.94
765	766	3.189495	GCTCTGAGGAGGCTTGTAAAAAC	59.811	47.826	6.83	0.00	39.80	2.43
766	767	4.389374	CTCTGAGGAGGCTTGTAAAAACA	58.611	43.478	0.00	0.00	36.03	2.83
767	768	4.985538	TCTGAGGAGGCTTGTAAAAACAT	58.014	39.130	0.00	0.00	0.00	2.71
768	769	5.003804	TCTGAGGAGGCTTGTAAAAACATC	58.996	41.667	0.00	0.00	0.00	3.06
769	770	4.079253	TGAGGAGGCTTGTAAAAACATCC	58.921	43.478	0.00	0.00	34.27	3.51
770	771	4.202567	TGAGGAGGCTTGTAAAAACATCCT	60.203	41.667	1.85	1.85	43.37	3.24
771	772	4.740902	AGGAGGCTTGTAAAAACATCCTT	58.259	39.130	0.00	0.00	39.38	3.36
772	773	4.767409	AGGAGGCTTGTAAAAACATCCTTC	59.233	41.667	0.00	0.00	39.38	3.46
773	774	4.767409	GGAGGCTTGTAAAAACATCCTTCT	59.233	41.667	0.00	0.00	32.15	2.85
774	775	5.243954	GGAGGCTTGTAAAAACATCCTTCTT	59.756	40.000	0.00	0.00	32.15	2.52
775	776	6.239317	GGAGGCTTGTAAAAACATCCTTCTTT	60.239	38.462	0.00	0.00	32.15	2.52
776	777	7.124573	AGGCTTGTAAAAACATCCTTCTTTT	57.875	32.000	0.00	0.00	0.00	2.27
777	778	8.245195	AGGCTTGTAAAAACATCCTTCTTTTA	57.755	30.769	0.00	0.00	0.00	1.52
778	779	8.870116	AGGCTTGTAAAAACATCCTTCTTTTAT	58.130	29.630	0.00	0.00	29.82	1.40
779	780	9.489084	GGCTTGTAAAAACATCCTTCTTTTATT	57.511	29.630	0.00	0.00	29.82	1.40
789	790	9.933723	AACATCCTTCTTTTATTTCTGGATTTG	57.066	29.630	0.00	0.00	31.31	2.32
790	791	9.093458	ACATCCTTCTTTTATTTCTGGATTTGT	57.907	29.630	0.00	0.00	31.31	2.83
791	792	9.362539	CATCCTTCTTTTATTTCTGGATTTGTG	57.637	33.333	0.00	0.00	31.31	3.33
792	793	7.895759	TCCTTCTTTTATTTCTGGATTTGTGG	58.104	34.615	0.00	0.00	0.00	4.17
793	794	6.591448	CCTTCTTTTATTTCTGGATTTGTGGC	59.409	38.462	0.00	0.00	0.00	5.01
794	795	6.036577	TCTTTTATTTCTGGATTTGTGGCC	57.963	37.500	0.00	0.00	0.00	5.36
795	796	5.779771	TCTTTTATTTCTGGATTTGTGGCCT	59.220	36.000	3.32	0.00	0.00	5.19
796	797	6.269769	TCTTTTATTTCTGGATTTGTGGCCTT	59.730	34.615	3.32	0.00	0.00	4.35
797	798	3.967332	ATTTCTGGATTTGTGGCCTTG	57.033	42.857	3.32	0.00	0.00	3.61
798	799	2.380064	TTCTGGATTTGTGGCCTTGT	57.620	45.000	3.32	0.00	0.00	3.16
799	800	3.517296	TTCTGGATTTGTGGCCTTGTA	57.483	42.857	3.32	0.00	0.00	2.41
800	801	3.737559	TCTGGATTTGTGGCCTTGTAT	57.262	42.857	3.32	0.00	0.00	2.29
801	802	4.853468	TCTGGATTTGTGGCCTTGTATA	57.147	40.909	3.32	0.00	0.00	1.47
802	803	5.387113	TCTGGATTTGTGGCCTTGTATAT	57.613	39.130	3.32	0.00	0.00	0.86
803	804	6.508030	TCTGGATTTGTGGCCTTGTATATA	57.492	37.500	3.32	0.00	0.00	0.86
804	805	6.905736	TCTGGATTTGTGGCCTTGTATATAA	58.094	36.000	3.32	0.00	0.00	0.98
805	806	7.350382	TCTGGATTTGTGGCCTTGTATATAAA	58.650	34.615	3.32	0.00	0.00	1.40
806	807	7.836685	TCTGGATTTGTGGCCTTGTATATAAAA	59.163	33.333	3.32	0.00	0.00	1.52
807	808	8.367660	TGGATTTGTGGCCTTGTATATAAAAA	57.632	30.769	3.32	0.00	0.00	1.94
808	809	8.986991	TGGATTTGTGGCCTTGTATATAAAAAT	58.013	29.630	3.32	0.00	0.00	1.82
809	810	9.260002	GGATTTGTGGCCTTGTATATAAAAATG	57.740	33.333	3.32	0.00	0.00	2.32
812	813	7.038154	TGTGGCCTTGTATATAAAAATGAGC	57.962	36.000	3.32	0.00	0.00	4.26
813	814	6.040391	TGTGGCCTTGTATATAAAAATGAGCC	59.960	38.462	3.32	8.00	36.06	4.70
814	815	5.240623	TGGCCTTGTATATAAAAATGAGCCG	59.759	40.000	3.32	0.00	38.34	5.52
815	816	5.240844	GGCCTTGTATATAAAAATGAGCCGT	59.759	40.000	0.00	0.00	0.00	5.68
816	817	6.238925	GGCCTTGTATATAAAAATGAGCCGTT	60.239	38.462	0.00	0.00	0.00	4.44
817	818	7.040961	GGCCTTGTATATAAAAATGAGCCGTTA	60.041	37.037	0.00	0.00	0.00	3.18
818	819	8.512138	GCCTTGTATATAAAAATGAGCCGTTAT	58.488	33.333	0.00	0.00	0.00	1.89
821	822	9.562408	TTGTATATAAAAATGAGCCGTTATCCA	57.438	29.630	0.00	0.00	0.00	3.41
822	823	9.562408	TGTATATAAAAATGAGCCGTTATCCAA	57.438	29.630	0.00	0.00	0.00	3.53
825	826	5.461032	AAAAATGAGCCGTTATCCAAACA	57.539	34.783	0.00	0.00	0.00	2.83
826	827	5.461032	AAAATGAGCCGTTATCCAAACAA	57.539	34.783	0.00	0.00	0.00	2.83
889	890	3.912745	AACCCCACGCATCGGTTCC	62.913	63.158	0.00	0.00	34.80	3.62
1018	1019	0.107508	CATGGATTCCACTGCCGACT	60.108	55.000	7.76	0.00	35.80	4.18
1050	1051	1.344191	GCCCTCTCTTCCAGCCTGAT	61.344	60.000	0.00	0.00	0.00	2.90
1054	1055	1.829849	CTCTCTTCCAGCCTGATGACA	59.170	52.381	0.00	0.00	0.00	3.58
1134	1135	1.280133	TCGTCTTCTTCGGAGGAGGTA	59.720	52.381	0.00	0.00	37.28	3.08
1512	1513	1.967066	AGCGATTTCATCTCCCTCGAT	59.033	47.619	0.00	0.00	0.00	3.59
1606	1607	1.196127	CCCCAAGTAAGAAAACGCGAC	59.804	52.381	15.93	0.00	0.00	5.19
1607	1608	2.140717	CCCAAGTAAGAAAACGCGACT	58.859	47.619	15.93	0.00	0.00	4.18
1665	1684	3.190535	TGCAAATAGAAGGAAAGTTCGGC	59.809	43.478	0.00	0.00	0.00	5.54
1713	1732	9.424319	GGAATAGCTCATAGATTTTGATAACGA	57.576	33.333	0.00	0.00	0.00	3.85
1735	1754	2.497138	TGCAGACTCCAAACATGACTG	58.503	47.619	0.00	0.00	0.00	3.51
1770	1789	2.802247	GTTGAACAGAAAAATGGCCAGC	59.198	45.455	13.05	0.00	0.00	4.85
1772	1791	2.036217	TGAACAGAAAAATGGCCAGCAG	59.964	45.455	13.05	0.00	0.00	4.24
1795	1814	1.642728	TGATCATTTGGCAAATGCGC	58.357	45.000	36.43	30.12	46.09	6.09
1844	1864	7.428282	TTCACGAATATGCAAAAGACTTGTA	57.572	32.000	0.00	0.00	0.00	2.41
1887	1907	8.500773	TCAAAATATAAGACGTTTTCTGACACC	58.499	33.333	0.00	0.00	33.46	4.16
1918	1938	7.442656	ACGTCTTATATTTTGATACAGAGGGG	58.557	38.462	0.00	0.00	0.00	4.79
1930	1950	7.316393	TGATACAGAGGGGGTATTTCATTAG	57.684	40.000	0.00	0.00	31.84	1.73
1945	1965	9.708092	GTATTTCATTAGTAGGGAGGTCATTAC	57.292	37.037	0.00	0.00	0.00	1.89
1975	1995	7.677454	ACATACATGTGCTCATACAATATGG	57.323	36.000	9.11	3.28	40.03	2.74
2007	2028	3.840831	CTCAATGGAGCAGAACCGA	57.159	52.632	0.00	0.00	33.67	4.69
2035	2056	7.224753	GGAGTGCAATTGATTAAGAATCTACGA	59.775	37.037	10.34	0.00	38.72	3.43
2036	2057	7.910304	AGTGCAATTGATTAAGAATCTACGAC	58.090	34.615	10.34	0.00	38.72	4.34
2037	2058	7.011482	AGTGCAATTGATTAAGAATCTACGACC	59.989	37.037	10.34	0.00	38.72	4.79
2038	2059	7.011482	GTGCAATTGATTAAGAATCTACGACCT	59.989	37.037	10.34	0.00	38.72	3.85
2039	2060	8.201464	TGCAATTGATTAAGAATCTACGACCTA	58.799	33.333	10.34	0.00	38.72	3.08
2040	2061	9.209175	GCAATTGATTAAGAATCTACGACCTAT	57.791	33.333	10.34	0.00	38.72	2.57
2043	2064	9.698309	ATTGATTAAGAATCTACGACCTATGTG	57.302	33.333	0.00	0.00	38.72	3.21
2044	2065	7.145985	TGATTAAGAATCTACGACCTATGTGC	58.854	38.462	0.00	0.00	38.72	4.57
2045	2066	6.459670	TTAAGAATCTACGACCTATGTGCA	57.540	37.500	0.00	0.00	0.00	4.57
2046	2067	5.537300	AAGAATCTACGACCTATGTGCAT	57.463	39.130	0.00	0.00	0.00	3.96
2047	2068	5.537300	AGAATCTACGACCTATGTGCATT	57.463	39.130	0.00	0.00	0.00	3.56
2048	2069	6.650427	AGAATCTACGACCTATGTGCATTA	57.350	37.500	0.00	0.00	0.00	1.90
2049	2070	7.233389	AGAATCTACGACCTATGTGCATTAT	57.767	36.000	0.00	0.00	0.00	1.28
2050	2071	7.093354	AGAATCTACGACCTATGTGCATTATG	58.907	38.462	0.00	0.00	0.00	1.90
2051	2072	6.590234	ATCTACGACCTATGTGCATTATGA	57.410	37.500	0.00	0.00	0.00	2.15
2052	2073	6.590234	TCTACGACCTATGTGCATTATGAT	57.410	37.500	0.00	0.00	0.00	2.45
2053	2074	6.389906	TCTACGACCTATGTGCATTATGATG	58.610	40.000	0.00	0.00	36.32	3.07
2054	2075	4.960938	ACGACCTATGTGCATTATGATGT	58.039	39.130	0.00	0.00	35.63	3.06
2055	2076	4.751600	ACGACCTATGTGCATTATGATGTG	59.248	41.667	0.00	0.00	35.63	3.21
2056	2077	4.990426	CGACCTATGTGCATTATGATGTGA	59.010	41.667	0.00	0.00	35.63	3.58
2057	2078	5.107337	CGACCTATGTGCATTATGATGTGAC	60.107	44.000	0.00	0.00	35.63	3.67
2058	2079	4.751600	ACCTATGTGCATTATGATGTGACG	59.248	41.667	0.00	0.00	35.63	4.35
2195	2217	7.414436	TGTCCAAAGAGTTTAAGAATTTGACG	58.586	34.615	0.00	0.00	33.69	4.35
2240	2262	7.910584	AGGAAGGAAGCAACATTTAATTGAAT	58.089	30.769	4.42	0.00	0.00	2.57
2241	2263	7.820872	AGGAAGGAAGCAACATTTAATTGAATG	59.179	33.333	18.53	18.53	41.64	2.67
2243	2265	6.408869	AGGAAGCAACATTTAATTGAATGGG	58.591	36.000	22.55	16.22	40.50	4.00
2272	2294	9.408648	GGAATTAAGAGAGATAGATAGAGGGAG	57.591	40.741	0.00	0.00	0.00	4.30
2297	2321	3.055819	GGCATAGGAAAGTCTGTGTCAGA	60.056	47.826	0.00	0.00	38.25	3.27
2338	2362	4.164822	GCACAGTGCAGTGATTTAATGT	57.835	40.909	28.02	0.00	44.26	2.71
2339	2363	4.161333	GCACAGTGCAGTGATTTAATGTC	58.839	43.478	28.02	7.25	44.26	3.06
2397	2428	8.015658	GCAAAATAACTAGTGTGGTTTGTCTAG	58.984	37.037	16.57	0.00	36.80	2.43
2479	2510	3.776969	ACCTGAACATTGAGGATCTGCTA	59.223	43.478	3.96	0.00	34.93	3.49
2539	2570	0.107459	AAAAGCCAGAGGAGATCCGC	60.107	55.000	0.00	0.00	42.08	5.54
2646	2677	3.265791	AGATGACGGTTGATCTTGCTTC	58.734	45.455	0.00	0.00	0.00	3.86
2673	2704	6.261826	GTCTATGCTGCTATTCTTGGTTTCAT	59.738	38.462	0.00	0.00	0.00	2.57
2752	2787	3.375922	TGAGTCGGTGAAAACAGAAAACC	59.624	43.478	0.00	0.00	0.00	3.27
2757	2792	4.830826	GGTGAAAACAGAAAACCGAGAT	57.169	40.909	0.00	0.00	0.00	2.75
2763	2798	1.202758	ACAGAAAACCGAGATGCACCA	60.203	47.619	0.00	0.00	0.00	4.17
2821	2858	1.535028	GTGTGAATTGTGGATGCGTGA	59.465	47.619	0.00	0.00	0.00	4.35
2934	2973	4.024048	CAGTTAAGTTGTTGCTGGATCGTT	60.024	41.667	0.00	0.00	0.00	3.85
2996	3035	3.213206	CCATGCTTGGCCTTATCTACA	57.787	47.619	3.32	0.00	35.85	2.74
3002	3041	4.142182	TGCTTGGCCTTATCTACAAATTGC	60.142	41.667	3.32	0.00	0.00	3.56
3079	3118	5.065731	GTCTGAGCAGAAATTATCACCTTGG	59.934	44.000	1.08	0.00	39.48	3.61
3163	3270	5.333263	GCTGCATGTTTTTGTGTAAATGTCC	60.333	40.000	0.00	0.00	0.00	4.02
3422	3575	7.104939	AGAGATGCATAGAAGATAAATCAGGC	58.895	38.462	0.00	0.00	0.00	4.85
3444	3597	5.591877	GGCACTAACATCTTTCCATTCTGAT	59.408	40.000	0.00	0.00	0.00	2.90

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
14	15	4.896829	TAGAGGCGAGGGCGAGGG	62.897	72.222	0.00	0.00	41.24	4.30
15	16	2.598985	ATAGAGGCGAGGGCGAGG	60.599	66.667	0.00	0.00	41.24	4.63
16	17	1.456196	TTGATAGAGGCGAGGGCGAG	61.456	60.000	0.00	0.00	41.24	5.03
17	18	1.455032	TTGATAGAGGCGAGGGCGA	60.455	57.895	0.00	0.00	41.24	5.54
18	19	1.006805	CTTGATAGAGGCGAGGGCG	60.007	63.158	0.00	0.00	41.24	6.13
19	20	0.316841	CTCTTGATAGAGGCGAGGGC	59.683	60.000	0.00	0.00	43.52	5.19
27	28	1.133450	TCCGGGTCCCTCTTGATAGAG	60.133	57.143	6.29	0.00	46.24	2.43
28	29	0.931468	TCCGGGTCCCTCTTGATAGA	59.069	55.000	6.29	0.00	0.00	1.98
29	30	1.333177	CTCCGGGTCCCTCTTGATAG	58.667	60.000	6.29	0.00	0.00	2.08
30	31	0.105658	CCTCCGGGTCCCTCTTGATA	60.106	60.000	6.29	0.00	0.00	2.15
31	32	1.383248	CCTCCGGGTCCCTCTTGAT	60.383	63.158	6.29	0.00	0.00	2.57
32	33	2.038975	CCTCCGGGTCCCTCTTGA	59.961	66.667	6.29	0.00	0.00	3.02
33	34	2.284699	ACCTCCGGGTCCCTCTTG	60.285	66.667	6.29	0.00	43.38	3.02
42	43	1.897615	CGCCTACTAGACCTCCGGG	60.898	68.421	0.00	0.00	38.88	5.73
43	44	2.553727	GCGCCTACTAGACCTCCGG	61.554	68.421	0.00	0.00	0.00	5.14
44	45	2.894565	CGCGCCTACTAGACCTCCG	61.895	68.421	0.00	0.00	0.00	4.63
45	46	2.553727	CCGCGCCTACTAGACCTCC	61.554	68.421	0.00	0.00	0.00	4.30
46	47	0.533755	TACCGCGCCTACTAGACCTC	60.534	60.000	0.00	0.00	0.00	3.85
47	48	0.534652	CTACCGCGCCTACTAGACCT	60.535	60.000	0.00	0.00	0.00	3.85
48	49	1.513836	CCTACCGCGCCTACTAGACC	61.514	65.000	0.00	0.00	0.00	3.85
49	50	0.533755	TCCTACCGCGCCTACTAGAC	60.534	60.000	0.00	0.00	0.00	2.59
50	51	0.250209	CTCCTACCGCGCCTACTAGA	60.250	60.000	0.00	0.00	0.00	2.43
51	52	1.235948	CCTCCTACCGCGCCTACTAG	61.236	65.000	0.00	0.00	0.00	2.57
52	53	1.228063	CCTCCTACCGCGCCTACTA	60.228	63.158	0.00	0.00	0.00	1.82
53	54	2.518825	CCTCCTACCGCGCCTACT	60.519	66.667	0.00	0.00	0.00	2.57
54	55	3.603671	CCCTCCTACCGCGCCTAC	61.604	72.222	0.00	0.00	0.00	3.18
55	56	4.133373	ACCCTCCTACCGCGCCTA	62.133	66.667	0.00	0.00	0.00	3.93
58	59	3.537874	ATCACCCTCCTACCGCGC	61.538	66.667	0.00	0.00	0.00	6.86
59	60	2.417516	CATCACCCTCCTACCGCG	59.582	66.667	0.00	0.00	0.00	6.46
60	61	2.109181	GCATCACCCTCCTACCGC	59.891	66.667	0.00	0.00	0.00	5.68
61	62	1.330655	ACTGCATCACCCTCCTACCG	61.331	60.000	0.00	0.00	0.00	4.02
62	63	0.179000	CACTGCATCACCCTCCTACC	59.821	60.000	0.00	0.00	0.00	3.18
63	64	0.462759	GCACTGCATCACCCTCCTAC	60.463	60.000	0.00	0.00	0.00	3.18
64	65	0.909133	TGCACTGCATCACCCTCCTA	60.909	55.000	0.00	0.00	31.71	2.94
65	66	2.194388	CTGCACTGCATCACCCTCCT	62.194	60.000	3.64	0.00	38.13	3.69
66	67	1.748122	CTGCACTGCATCACCCTCC	60.748	63.158	3.64	0.00	38.13	4.30
67	68	1.748122	CCTGCACTGCATCACCCTC	60.748	63.158	3.64	0.00	38.13	4.30
68	69	2.194388	CTCCTGCACTGCATCACCCT	62.194	60.000	3.64	0.00	38.13	4.34
69	70	1.748122	CTCCTGCACTGCATCACCC	60.748	63.158	3.64	0.00	38.13	4.61
70	71	1.748122	CCTCCTGCACTGCATCACC	60.748	63.158	3.64	0.00	38.13	4.02
71	72	1.748122	CCCTCCTGCACTGCATCAC	60.748	63.158	3.64	0.00	38.13	3.06
72	73	2.672908	CCCTCCTGCACTGCATCA	59.327	61.111	3.64	0.00	38.13	3.07
73	74	2.827642	GCCCTCCTGCACTGCATC	60.828	66.667	3.64	0.00	38.13	3.91
74	75	4.437587	GGCCCTCCTGCACTGCAT	62.438	66.667	3.64	0.00	38.13	3.96
85	86	4.083862	GACACTGTCCGGGCCCTC	62.084	72.222	22.43	10.88	0.00	4.30
89	90	4.436998	CTCCGACACTGTCCGGGC	62.437	72.222	15.37	0.00	45.36	6.13
90	91	2.675423	TCTCCGACACTGTCCGGG	60.675	66.667	15.37	8.02	45.36	5.73
91	92	2.701780	CCTCTCCGACACTGTCCGG	61.702	68.421	10.80	10.80	46.57	5.14
92	93	1.674651	TCCTCTCCGACACTGTCCG	60.675	63.158	3.50	0.00	0.00	4.79
93	94	1.596895	GGTCCTCTCCGACACTGTCC	61.597	65.000	3.50	0.00	34.24	4.02
94	95	0.894184	TGGTCCTCTCCGACACTGTC	60.894	60.000	0.00	0.00	34.24	3.51
95	96	0.469331	TTGGTCCTCTCCGACACTGT	60.469	55.000	0.00	0.00	34.24	3.55
96	97	0.038159	GTTGGTCCTCTCCGACACTG	60.038	60.000	0.00	0.00	40.56	3.66
97	98	1.186267	GGTTGGTCCTCTCCGACACT	61.186	60.000	5.62	0.00	42.13	3.55
98	99	1.292541	GGTTGGTCCTCTCCGACAC	59.707	63.158	5.62	0.00	42.13	3.67
99	100	2.273179	CGGTTGGTCCTCTCCGACA	61.273	63.158	12.32	0.00	44.86	4.35
100	101	2.572284	CGGTTGGTCCTCTCCGAC	59.428	66.667	12.32	0.00	44.86	4.79
101	102	2.678934	CCGGTTGGTCCTCTCCGA	60.679	66.667	17.10	0.00	44.86	4.55
102	103	4.452733	GCCGGTTGGTCCTCTCCG	62.453	72.222	1.90	11.20	42.22	4.63
103	104	3.316573	CTGCCGGTTGGTCCTCTCC	62.317	68.421	1.90	0.00	37.67	3.71
104	105	2.266055	CTGCCGGTTGGTCCTCTC	59.734	66.667	1.90	0.00	37.67	3.20
105	106	4.021925	GCTGCCGGTTGGTCCTCT	62.022	66.667	1.90	0.00	37.67	3.69
106	107	4.329545	TGCTGCCGGTTGGTCCTC	62.330	66.667	1.90	0.00	37.67	3.71
107	108	4.643387	GTGCTGCCGGTTGGTCCT	62.643	66.667	1.90	0.00	37.67	3.85
108	109	4.947147	TGTGCTGCCGGTTGGTCC	62.947	66.667	1.90	0.00	37.67	4.46
109	110	3.357079	CTGTGCTGCCGGTTGGTC	61.357	66.667	1.90	0.00	37.67	4.02
110	111	4.954970	CCTGTGCTGCCGGTTGGT	62.955	66.667	1.90	0.00	37.67	3.67
141	142	4.776322	CTTCACGGCCGCCATGGA	62.776	66.667	28.58	10.48	42.00	3.41
144	145	3.740128	CTAGCTTCACGGCCGCCAT	62.740	63.158	28.58	1.81	0.00	4.40
145	146	4.451150	CTAGCTTCACGGCCGCCA	62.451	66.667	28.58	9.25	0.00	5.69
148	149	1.952102	TAACCCTAGCTTCACGGCCG	61.952	60.000	26.86	26.86	0.00	6.13
149	150	0.179081	CTAACCCTAGCTTCACGGCC	60.179	60.000	0.00	0.00	0.00	6.13
150	151	0.810426	GCTAACCCTAGCTTCACGGC	60.810	60.000	0.00	0.00	46.12	5.68
151	152	3.364277	GCTAACCCTAGCTTCACGG	57.636	57.895	0.00	0.00	46.12	4.94
159	160	2.808206	CGGCCCAGGCTAACCCTAG	61.808	68.421	8.89	0.00	44.09	3.02
160	161	2.766651	CGGCCCAGGCTAACCCTA	60.767	66.667	8.89	0.00	44.09	3.53
162	163	4.176752	CTCGGCCCAGGCTAACCC	62.177	72.222	8.89	0.00	41.60	4.11
163	164	4.176752	CCTCGGCCCAGGCTAACC	62.177	72.222	2.39	0.00	41.60	2.85
164	165	3.081409	TCCTCGGCCCAGGCTAAC	61.081	66.667	12.35	0.00	41.60	2.34
165	166	2.764128	CTCCTCGGCCCAGGCTAA	60.764	66.667	12.35	0.00	41.60	3.09
166	167	3.751018	TCTCCTCGGCCCAGGCTA	61.751	66.667	12.35	0.00	41.60	3.93
188	189	4.832608	GATGCGACCCGTGTCCCC	62.833	72.222	0.00	0.00	38.32	4.81
189	190	4.832608	GGATGCGACCCGTGTCCC	62.833	72.222	0.00	0.00	38.32	4.46
190	191	4.832608	GGGATGCGACCCGTGTCC	62.833	72.222	2.28	0.00	40.49	4.02
197	198	3.771160	ACGAGGTGGGATGCGACC	61.771	66.667	10.55	10.55	0.00	4.79
198	199	2.509336	CACGAGGTGGGATGCGAC	60.509	66.667	0.00	0.00	0.00	5.19
199	200	4.451150	GCACGAGGTGGGATGCGA	62.451	66.667	0.00	0.00	33.64	5.10
200	201	4.457496	AGCACGAGGTGGGATGCG	62.457	66.667	0.00	0.00	42.98	4.73
201	202	2.512515	GAGCACGAGGTGGGATGC	60.513	66.667	0.00	0.00	38.39	3.91
202	203	1.021390	GTTGAGCACGAGGTGGGATG	61.021	60.000	0.00	0.00	33.64	3.51
203	204	1.296715	GTTGAGCACGAGGTGGGAT	59.703	57.895	0.00	0.00	33.64	3.85
204	205	1.691195	TTGTTGAGCACGAGGTGGGA	61.691	55.000	0.00	0.00	33.64	4.37
205	206	1.227823	TTGTTGAGCACGAGGTGGG	60.228	57.895	0.00	0.00	33.64	4.61
206	207	1.831389	CGTTGTTGAGCACGAGGTGG	61.831	60.000	0.00	0.00	33.64	4.61
207	208	1.564622	CGTTGTTGAGCACGAGGTG	59.435	57.895	0.00	0.00	36.51	4.00
208	209	2.244651	GCGTTGTTGAGCACGAGGT	61.245	57.895	0.00	0.00	0.00	3.85
209	210	2.551270	GCGTTGTTGAGCACGAGG	59.449	61.111	0.00	0.00	0.00	4.63
210	211	2.168621	CGCGTTGTTGAGCACGAG	59.831	61.111	0.00	0.00	0.00	4.18
211	212	3.995669	GCGCGTTGTTGAGCACGA	61.996	61.111	8.43	0.00	34.56	4.35
213	214	3.947841	TGGCGCGTTGTTGAGCAC	61.948	61.111	8.43	0.00	36.28	4.40
214	215	3.947841	GTGGCGCGTTGTTGAGCA	61.948	61.111	8.43	0.00	36.28	4.26
215	216	4.683334	GGTGGCGCGTTGTTGAGC	62.683	66.667	8.43	0.00	0.00	4.26
216	217	2.616330	ATGGTGGCGCGTTGTTGAG	61.616	57.895	8.43	0.00	0.00	3.02
217	218	2.593148	ATGGTGGCGCGTTGTTGA	60.593	55.556	8.43	0.00	0.00	3.18
218	219	2.428902	CATGGTGGCGCGTTGTTG	60.429	61.111	8.43	0.00	0.00	3.33
219	220	4.341502	GCATGGTGGCGCGTTGTT	62.342	61.111	8.43	0.00	0.00	2.83
238	239	4.803426	GTGGTGAGCTCGAGCCCG	62.803	72.222	32.94	0.00	43.38	6.13
239	240	4.803426	CGTGGTGAGCTCGAGCCC	62.803	72.222	32.94	26.10	43.38	5.19
240	241	4.803426	CCGTGGTGAGCTCGAGCC	62.803	72.222	32.94	23.66	43.38	4.70
242	243	4.803426	GGCCGTGGTGAGCTCGAG	62.803	72.222	8.45	8.45	0.00	4.04
268	269	3.712881	GTGGACGCGTTGGTGAGC	61.713	66.667	15.53	0.00	0.00	4.26
269	270	2.279851	TGTGGACGCGTTGGTGAG	60.280	61.111	15.53	0.00	0.00	3.51
270	271	2.586635	GTGTGGACGCGTTGGTGA	60.587	61.111	15.53	0.00	0.00	4.02
271	272	3.995669	CGTGTGGACGCGTTGGTG	61.996	66.667	15.53	0.00	44.02	4.17
285	286	3.815569	GATCTCGAGCTCGGGCGTG	62.816	68.421	33.98	18.85	44.37	5.34
286	287	3.587933	GATCTCGAGCTCGGGCGT	61.588	66.667	33.98	23.07	44.37	5.68
287	288	4.335584	GGATCTCGAGCTCGGGCG	62.336	72.222	33.98	22.20	44.37	6.13
288	289	2.485188	GATGGATCTCGAGCTCGGGC	62.485	65.000	33.98	19.73	40.23	6.13
289	290	1.583986	GATGGATCTCGAGCTCGGG	59.416	63.158	33.98	32.22	42.17	5.14
290	291	1.208870	CGATGGATCTCGAGCTCGG	59.791	63.158	33.98	24.14	41.12	4.63
291	292	0.385348	CACGATGGATCTCGAGCTCG	60.385	60.000	30.03	30.03	41.12	5.03
292	293	0.662970	GCACGATGGATCTCGAGCTC	60.663	60.000	15.97	7.78	46.94	4.09
293	294	1.361993	GCACGATGGATCTCGAGCT	59.638	57.895	15.97	0.00	46.94	4.09
294	295	3.929389	GCACGATGGATCTCGAGC	58.071	61.111	7.81	10.52	45.24	5.03
295	296	0.665298	TGAGCACGATGGATCTCGAG	59.335	55.000	5.93	5.93	41.12	4.04
296	297	0.382158	GTGAGCACGATGGATCTCGA	59.618	55.000	10.96	0.00	41.12	4.04
297	298	0.596083	GGTGAGCACGATGGATCTCG	60.596	60.000	3.04	3.04	44.14	4.04
298	299	0.461548	TGGTGAGCACGATGGATCTC	59.538	55.000	0.00	0.00	0.00	2.75
299	300	1.069823	GATGGTGAGCACGATGGATCT	59.930	52.381	2.80	0.00	29.74	2.75
300	301	1.506493	GATGGTGAGCACGATGGATC	58.494	55.000	2.80	0.00	29.74	3.36
301	302	0.249615	CGATGGTGAGCACGATGGAT	60.250	55.000	2.80	0.00	29.42	3.41
302	303	1.141665	CGATGGTGAGCACGATGGA	59.858	57.895	2.80	0.00	29.42	3.41
303	304	0.873312	CTCGATGGTGAGCACGATGG	60.873	60.000	2.80	2.45	34.41	3.51
304	305	2.586418	CTCGATGGTGAGCACGATG	58.414	57.895	2.80	0.00	34.41	3.84
331	332	2.685380	AAGCTCAGGGTCGAGGGG	60.685	66.667	0.00	0.00	33.36	4.79
332	333	2.581354	CAAGCTCAGGGTCGAGGG	59.419	66.667	0.00	0.00	33.36	4.30
333	334	2.232298	GACCAAGCTCAGGGTCGAGG	62.232	65.000	14.20	0.00	43.67	4.63
334	335	1.216710	GACCAAGCTCAGGGTCGAG	59.783	63.158	14.20	0.00	43.67	4.04
335	336	3.377656	GACCAAGCTCAGGGTCGA	58.622	61.111	14.20	0.00	43.67	4.20
338	339	0.904865	TGATCGACCAAGCTCAGGGT	60.905	55.000	9.70	7.19	40.96	4.34
339	340	0.179089	CTGATCGACCAAGCTCAGGG	60.179	60.000	9.70	4.03	32.49	4.45
340	341	0.179089	CCTGATCGACCAAGCTCAGG	60.179	60.000	14.37	14.37	44.73	3.86
341	342	0.809241	GCCTGATCGACCAAGCTCAG	60.809	60.000	0.00	0.00	35.00	3.35
342	343	1.219124	GCCTGATCGACCAAGCTCA	59.781	57.895	0.00	0.00	0.00	4.26
343	344	1.880340	CGCCTGATCGACCAAGCTC	60.880	63.158	0.00	0.00	0.00	4.09
344	345	2.185350	CGCCTGATCGACCAAGCT	59.815	61.111	0.00	0.00	0.00	3.74
345	346	2.892425	CCGCCTGATCGACCAAGC	60.892	66.667	0.00	0.00	0.00	4.01
346	347	1.519455	GACCGCCTGATCGACCAAG	60.519	63.158	0.00	0.00	0.00	3.61
347	348	1.982395	AGACCGCCTGATCGACCAA	60.982	57.895	0.00	0.00	0.00	3.67
348	349	2.362503	AGACCGCCTGATCGACCA	60.363	61.111	0.00	0.00	0.00	4.02
349	350	2.105128	CAGACCGCCTGATCGACC	59.895	66.667	0.00	0.00	45.78	4.79
350	351	3.197614	TCAGACCGCCTGATCGAC	58.802	61.111	0.00	0.00	46.38	4.20
362	363	4.803426	CGCTGCCGGTCCTCAGAC	62.803	72.222	10.61	2.12	42.73	3.51
390	391	3.984200	GAAACCGACGAGGAGGCCG	62.984	68.421	0.00	0.00	45.00	6.13
391	392	1.318158	TAGAAACCGACGAGGAGGCC	61.318	60.000	0.00	0.00	45.00	5.19
392	393	0.100861	CTAGAAACCGACGAGGAGGC	59.899	60.000	8.56	0.00	45.00	4.70
393	394	0.739561	CCTAGAAACCGACGAGGAGG	59.260	60.000	8.56	1.29	45.00	4.30
394	395	0.739561	CCCTAGAAACCGACGAGGAG	59.260	60.000	8.56	0.00	45.00	3.69
395	396	0.038744	ACCCTAGAAACCGACGAGGA	59.961	55.000	8.56	0.00	45.00	3.71
397	398	2.098770	CCTAACCCTAGAAACCGACGAG	59.901	54.545	0.00	0.00	0.00	4.18
398	399	2.094675	CCTAACCCTAGAAACCGACGA	58.905	52.381	0.00	0.00	0.00	4.20
399	400	1.135721	CCCTAACCCTAGAAACCGACG	59.864	57.143	0.00	0.00	0.00	5.12
400	401	2.182827	ACCCTAACCCTAGAAACCGAC	58.817	52.381	0.00	0.00	0.00	4.79
401	402	2.629017	ACCCTAACCCTAGAAACCGA	57.371	50.000	0.00	0.00	0.00	4.69
402	403	3.340928	CAAACCCTAACCCTAGAAACCG	58.659	50.000	0.00	0.00	0.00	4.44
403	404	3.331591	TCCAAACCCTAACCCTAGAAACC	59.668	47.826	0.00	0.00	0.00	3.27
404	405	4.567116	CCTCCAAACCCTAACCCTAGAAAC	60.567	50.000	0.00	0.00	0.00	2.78
405	406	3.590182	CCTCCAAACCCTAACCCTAGAAA	59.410	47.826	0.00	0.00	0.00	2.52
406	407	3.187112	CCTCCAAACCCTAACCCTAGAA	58.813	50.000	0.00	0.00	0.00	2.10
407	408	2.563596	CCCTCCAAACCCTAACCCTAGA	60.564	54.545	0.00	0.00	0.00	2.43
408	409	1.844497	CCCTCCAAACCCTAACCCTAG	59.156	57.143	0.00	0.00	0.00	3.02
409	410	1.441956	TCCCTCCAAACCCTAACCCTA	59.558	52.381	0.00	0.00	0.00	3.53
410	411	0.197661	TCCCTCCAAACCCTAACCCT	59.802	55.000	0.00	0.00	0.00	4.34
411	412	0.624254	CTCCCTCCAAACCCTAACCC	59.376	60.000	0.00	0.00	0.00	4.11
412	413	0.624254	CCTCCCTCCAAACCCTAACC	59.376	60.000	0.00	0.00	0.00	2.85
413	414	0.034380	GCCTCCCTCCAAACCCTAAC	60.034	60.000	0.00	0.00	0.00	2.34
414	415	0.476808	TGCCTCCCTCCAAACCCTAA	60.477	55.000	0.00	0.00	0.00	2.69
415	416	0.914417	CTGCCTCCCTCCAAACCCTA	60.914	60.000	0.00	0.00	0.00	3.53
416	417	2.121506	TGCCTCCCTCCAAACCCT	60.122	61.111	0.00	0.00	0.00	4.34
417	418	2.356667	CTGCCTCCCTCCAAACCC	59.643	66.667	0.00	0.00	0.00	4.11
418	419	2.356667	CCTGCCTCCCTCCAAACC	59.643	66.667	0.00	0.00	0.00	3.27
419	420	2.356667	CCCTGCCTCCCTCCAAAC	59.643	66.667	0.00	0.00	0.00	2.93
420	421	2.941025	CCCCTGCCTCCCTCCAAA	60.941	66.667	0.00	0.00	0.00	3.28
436	437	4.095400	TCTCCCTGCCTCCCTCCC	62.095	72.222	0.00	0.00	0.00	4.30
437	438	2.445654	CTCTCCCTGCCTCCCTCC	60.446	72.222	0.00	0.00	0.00	4.30
438	439	2.445654	CCTCTCCCTGCCTCCCTC	60.446	72.222	0.00	0.00	0.00	4.30
439	440	2.543978	CTTCCTCTCCCTGCCTCCCT	62.544	65.000	0.00	0.00	0.00	4.20
440	441	2.041265	TTCCTCTCCCTGCCTCCC	59.959	66.667	0.00	0.00	0.00	4.30
441	442	2.069430	CCTTCCTCTCCCTGCCTCC	61.069	68.421	0.00	0.00	0.00	4.30
442	443	2.069430	CCCTTCCTCTCCCTGCCTC	61.069	68.421	0.00	0.00	0.00	4.70
443	444	2.041928	CCCTTCCTCTCCCTGCCT	59.958	66.667	0.00	0.00	0.00	4.75
444	445	2.041265	TCCCTTCCTCTCCCTGCC	59.959	66.667	0.00	0.00	0.00	4.85
445	446	1.002274	TCTCCCTTCCTCTCCCTGC	59.998	63.158	0.00	0.00	0.00	4.85
446	447	0.633921	TCTCTCCCTTCCTCTCCCTG	59.366	60.000	0.00	0.00	0.00	4.45
447	448	0.933700	CTCTCTCCCTTCCTCTCCCT	59.066	60.000	0.00	0.00	0.00	4.20
448	449	0.930726	TCTCTCTCCCTTCCTCTCCC	59.069	60.000	0.00	0.00	0.00	4.30
449	450	1.133482	CCTCTCTCTCCCTTCCTCTCC	60.133	61.905	0.00	0.00	0.00	3.71
450	451	1.133482	CCCTCTCTCTCCCTTCCTCTC	60.133	61.905	0.00	0.00	0.00	3.20
451	452	0.933700	CCCTCTCTCTCCCTTCCTCT	59.066	60.000	0.00	0.00	0.00	3.69
452	453	0.930726	TCCCTCTCTCTCCCTTCCTC	59.069	60.000	0.00	0.00	0.00	3.71
453	454	0.933700	CTCCCTCTCTCTCCCTTCCT	59.066	60.000	0.00	0.00	0.00	3.36
454	455	0.759060	GCTCCCTCTCTCTCCCTTCC	60.759	65.000	0.00	0.00	0.00	3.46
455	456	1.106944	CGCTCCCTCTCTCTCCCTTC	61.107	65.000	0.00	0.00	0.00	3.46
456	457	1.076339	CGCTCCCTCTCTCTCCCTT	60.076	63.158	0.00	0.00	0.00	3.95
457	458	2.600731	CGCTCCCTCTCTCTCCCT	59.399	66.667	0.00	0.00	0.00	4.20
458	459	2.520741	CCGCTCCCTCTCTCTCCC	60.521	72.222	0.00	0.00	0.00	4.30
459	460	3.223589	GCCGCTCCCTCTCTCTCC	61.224	72.222	0.00	0.00	0.00	3.71
460	461	3.591835	CGCCGCTCCCTCTCTCTC	61.592	72.222	0.00	0.00	0.00	3.20
477	478	1.591059	ATGCATCTCTCGCACTCGC	60.591	57.895	0.00	0.00	43.35	5.03
478	479	1.213733	CCATGCATCTCTCGCACTCG	61.214	60.000	0.00	0.00	43.35	4.18
479	480	0.879400	CCCATGCATCTCTCGCACTC	60.879	60.000	0.00	0.00	43.35	3.51
480	481	1.145598	CCCATGCATCTCTCGCACT	59.854	57.895	0.00	0.00	43.35	4.40
481	482	2.541120	GCCCATGCATCTCTCGCAC	61.541	63.158	0.00	0.00	43.35	5.34
482	483	2.203112	GCCCATGCATCTCTCGCA	60.203	61.111	0.00	0.00	44.94	5.10
483	484	3.344215	CGCCCATGCATCTCTCGC	61.344	66.667	0.00	0.00	37.32	5.03
484	485	1.522355	AACGCCCATGCATCTCTCG	60.522	57.895	0.00	0.68	37.32	4.04
485	486	1.442526	CCAACGCCCATGCATCTCTC	61.443	60.000	0.00	0.00	37.32	3.20
486	487	1.452651	CCAACGCCCATGCATCTCT	60.453	57.895	0.00	0.00	37.32	3.10
487	488	2.484062	CCCAACGCCCATGCATCTC	61.484	63.158	0.00	0.00	37.32	2.75
488	489	2.440796	CCCAACGCCCATGCATCT	60.441	61.111	0.00	0.00	37.32	2.90
489	490	2.283472	GAACCCAACGCCCATGCATC	62.283	60.000	0.00	0.00	37.32	3.91
490	491	2.283821	AACCCAACGCCCATGCAT	60.284	55.556	0.00	0.00	37.32	3.96
491	492	2.988684	GAACCCAACGCCCATGCA	60.989	61.111	0.00	0.00	37.32	3.96
492	493	2.676471	AGAACCCAACGCCCATGC	60.676	61.111	0.00	0.00	0.00	4.06
493	494	2.046285	GGAGAACCCAACGCCCATG	61.046	63.158	0.00	0.00	34.14	3.66
494	495	2.355115	GGAGAACCCAACGCCCAT	59.645	61.111	0.00	0.00	34.14	4.00
495	496	3.172106	TGGAGAACCCAACGCCCA	61.172	61.111	0.00	0.00	43.29	5.36
511	512	3.901797	GAACCCAGTGGCTCCCGTG	62.902	68.421	2.61	0.00	33.59	4.94
512	513	3.637273	GAACCCAGTGGCTCCCGT	61.637	66.667	2.61	0.00	33.59	5.28
513	514	1.550130	TAAGAACCCAGTGGCTCCCG	61.550	60.000	2.61	0.00	33.59	5.14
514	515	0.919710	ATAAGAACCCAGTGGCTCCC	59.080	55.000	2.61	0.00	33.59	4.30
515	516	3.744660	CATATAAGAACCCAGTGGCTCC	58.255	50.000	2.61	0.00	33.59	4.70
516	517	3.142174	GCATATAAGAACCCAGTGGCTC	58.858	50.000	2.61	2.25	33.59	4.70
517	518	2.158608	GGCATATAAGAACCCAGTGGCT	60.159	50.000	2.61	0.00	33.59	4.75
518	519	2.158608	AGGCATATAAGAACCCAGTGGC	60.159	50.000	2.61	0.00	33.59	5.01
519	520	3.480470	CAGGCATATAAGAACCCAGTGG	58.520	50.000	0.63	0.63	37.80	4.00
520	521	2.880890	GCAGGCATATAAGAACCCAGTG	59.119	50.000	0.00	0.00	0.00	3.66
521	522	2.485479	CGCAGGCATATAAGAACCCAGT	60.485	50.000	0.00	0.00	0.00	4.00
522	523	2.146342	CGCAGGCATATAAGAACCCAG	58.854	52.381	0.00	0.00	0.00	4.45
523	524	1.813862	GCGCAGGCATATAAGAACCCA	60.814	52.381	0.30	0.00	39.62	4.51
524	525	0.875059	GCGCAGGCATATAAGAACCC	59.125	55.000	0.30	0.00	39.62	4.11
525	526	0.512952	CGCGCAGGCATATAAGAACC	59.487	55.000	8.75	0.00	39.92	3.62
526	527	0.110644	GCGCGCAGGCATATAAGAAC	60.111	55.000	29.10	0.00	39.92	3.01
527	528	0.531753	TGCGCGCAGGCATATAAGAA	60.532	50.000	33.09	1.22	38.17	2.52
528	529	0.531753	TTGCGCGCAGGCATATAAGA	60.532	50.000	34.25	12.70	43.52	2.10
529	530	0.307453	TTTGCGCGCAGGCATATAAG	59.693	50.000	34.25	0.00	43.52	1.73
530	531	0.735471	TTTTGCGCGCAGGCATATAA	59.265	45.000	34.25	20.66	43.52	0.98
531	532	0.950836	ATTTTGCGCGCAGGCATATA	59.049	45.000	34.25	15.24	43.52	0.86
532	533	0.595567	CATTTTGCGCGCAGGCATAT	60.596	50.000	34.25	17.01	43.52	1.78
533	534	1.226632	CATTTTGCGCGCAGGCATA	60.227	52.632	34.25	16.94	43.52	3.14
534	535	2.507547	CATTTTGCGCGCAGGCAT	60.508	55.556	34.25	22.91	43.52	4.40
535	536	3.668312	TCATTTTGCGCGCAGGCA	61.668	55.556	34.25	21.66	42.12	4.75
536	537	3.174573	GTCATTTTGCGCGCAGGC	61.175	61.111	34.25	20.58	0.00	4.85
537	538	2.778551	TTCGTCATTTTGCGCGCAGG	62.779	55.000	34.25	23.31	0.00	4.85
538	539	0.996229	TTTCGTCATTTTGCGCGCAG	60.996	50.000	34.25	22.46	0.00	5.18
539	540	0.592500	TTTTCGTCATTTTGCGCGCA	60.593	45.000	33.09	33.09	0.00	6.09
540	541	0.707822	ATTTTCGTCATTTTGCGCGC	59.292	45.000	27.26	27.26	0.00	6.86
541	542	1.522813	GCATTTTCGTCATTTTGCGCG	60.523	47.619	0.00	0.00	0.00	6.86
542	543	1.201801	GGCATTTTCGTCATTTTGCGC	60.202	47.619	0.00	0.00	0.00	6.09
543	544	1.389784	GGGCATTTTCGTCATTTTGCG	59.610	47.619	0.00	0.00	0.00	4.85
544	545	2.667969	GAGGGCATTTTCGTCATTTTGC	59.332	45.455	0.00	0.00	0.00	3.68
545	546	3.911868	TGAGGGCATTTTCGTCATTTTG	58.088	40.909	0.00	0.00	0.00	2.44
546	547	3.614870	GCTGAGGGCATTTTCGTCATTTT	60.615	43.478	0.00	0.00	41.35	1.82
547	548	2.094545	GCTGAGGGCATTTTCGTCATTT	60.095	45.455	0.00	0.00	41.35	2.32
548	549	1.474077	GCTGAGGGCATTTTCGTCATT	59.526	47.619	0.00	0.00	41.35	2.57
549	550	1.098050	GCTGAGGGCATTTTCGTCAT	58.902	50.000	0.00	0.00	41.35	3.06
550	551	1.298157	CGCTGAGGGCATTTTCGTCA	61.298	55.000	0.00	0.00	41.91	4.35
551	552	1.425428	CGCTGAGGGCATTTTCGTC	59.575	57.895	0.00	0.00	41.91	4.20
552	553	2.040544	CCGCTGAGGGCATTTTCGT	61.041	57.895	0.00	0.00	41.91	3.85
553	554	2.793946	CCGCTGAGGGCATTTTCG	59.206	61.111	0.00	0.00	41.91	3.46
562	563	1.772819	AATATCCTGCCCCGCTGAGG	61.773	60.000	0.00	0.00	40.63	3.86
563	564	0.109342	AAATATCCTGCCCCGCTGAG	59.891	55.000	0.00	0.00	0.00	3.35
564	565	1.071699	GTAAATATCCTGCCCCGCTGA	59.928	52.381	0.00	0.00	0.00	4.26
565	566	1.523758	GTAAATATCCTGCCCCGCTG	58.476	55.000	0.00	0.00	0.00	5.18
566	567	0.034896	CGTAAATATCCTGCCCCGCT	59.965	55.000	0.00	0.00	0.00	5.52
567	568	1.574702	GCGTAAATATCCTGCCCCGC	61.575	60.000	0.00	0.00	0.00	6.13
568	569	1.289109	CGCGTAAATATCCTGCCCCG	61.289	60.000	0.00	0.00	0.00	5.73
569	570	1.574702	GCGCGTAAATATCCTGCCCC	61.575	60.000	8.43	0.00	0.00	5.80
570	571	1.866925	GCGCGTAAATATCCTGCCC	59.133	57.895	8.43	0.00	0.00	5.36
571	572	1.491563	CGCGCGTAAATATCCTGCC	59.508	57.895	24.19	0.00	0.00	4.85
572	573	1.219522	ACCGCGCGTAAATATCCTGC	61.220	55.000	29.95	0.00	0.00	4.85
573	574	0.506932	CACCGCGCGTAAATATCCTG	59.493	55.000	29.95	11.50	0.00	3.86
574	575	0.599204	CCACCGCGCGTAAATATCCT	60.599	55.000	29.95	0.00	0.00	3.24
575	576	1.857364	CCACCGCGCGTAAATATCC	59.143	57.895	29.95	0.00	0.00	2.59
576	577	1.203313	GCCACCGCGCGTAAATATC	59.797	57.895	29.95	6.94	0.00	1.63
577	578	1.521906	TGCCACCGCGCGTAAATAT	60.522	52.632	29.95	3.45	38.08	1.28
578	579	2.125633	TGCCACCGCGCGTAAATA	60.126	55.556	29.95	9.20	38.08	1.40
579	580	3.795342	GTGCCACCGCGCGTAAAT	61.795	61.111	29.95	8.26	38.08	1.40
612	613	3.932580	TTACTGCCTCCACGCGCTG	62.933	63.158	5.73	3.55	0.00	5.18
613	614	3.691342	TTACTGCCTCCACGCGCT	61.691	61.111	5.73	0.00	0.00	5.92
614	615	2.552585	TAGTTACTGCCTCCACGCGC	62.553	60.000	5.73	0.00	0.00	6.86
615	616	0.102481	ATAGTTACTGCCTCCACGCG	59.898	55.000	3.53	3.53	0.00	6.01
616	617	2.202566	GAATAGTTACTGCCTCCACGC	58.797	52.381	0.00	0.00	0.00	5.34
617	618	3.520290	TGAATAGTTACTGCCTCCACG	57.480	47.619	0.00	0.00	0.00	4.94
618	619	6.116126	AGAAATGAATAGTTACTGCCTCCAC	58.884	40.000	0.00	0.00	0.00	4.02
619	620	6.313519	AGAAATGAATAGTTACTGCCTCCA	57.686	37.500	0.00	0.00	0.00	3.86
620	621	9.646427	CTATAGAAATGAATAGTTACTGCCTCC	57.354	37.037	0.00	0.00	0.00	4.30
622	623	9.988815	CACTATAGAAATGAATAGTTACTGCCT	57.011	33.333	6.78	0.00	0.00	4.75
623	624	8.713271	GCACTATAGAAATGAATAGTTACTGCC	58.287	37.037	6.78	0.00	0.00	4.85
624	625	8.713271	GGCACTATAGAAATGAATAGTTACTGC	58.287	37.037	6.78	0.00	0.00	4.40
625	626	9.209175	GGGCACTATAGAAATGAATAGTTACTG	57.791	37.037	6.78	0.00	0.00	2.74
626	627	8.934697	TGGGCACTATAGAAATGAATAGTTACT	58.065	33.333	6.78	0.00	0.00	2.24
627	628	9.726438	ATGGGCACTATAGAAATGAATAGTTAC	57.274	33.333	6.78	0.00	0.00	2.50
628	629	9.944376	GATGGGCACTATAGAAATGAATAGTTA	57.056	33.333	6.78	0.00	0.00	2.24
629	630	7.885399	GGATGGGCACTATAGAAATGAATAGTT	59.115	37.037	6.78	0.00	0.00	2.24
630	631	7.398024	GGATGGGCACTATAGAAATGAATAGT	58.602	38.462	6.78	0.00	0.00	2.12
631	632	6.825721	GGGATGGGCACTATAGAAATGAATAG	59.174	42.308	6.78	0.00	0.00	1.73
632	633	6.274436	TGGGATGGGCACTATAGAAATGAATA	59.726	38.462	6.78	0.00	0.00	1.75
633	634	5.074929	TGGGATGGGCACTATAGAAATGAAT	59.925	40.000	6.78	0.00	0.00	2.57
634	635	4.415179	TGGGATGGGCACTATAGAAATGAA	59.585	41.667	6.78	0.00	0.00	2.57
635	636	3.980022	TGGGATGGGCACTATAGAAATGA	59.020	43.478	6.78	0.00	0.00	2.57
636	637	4.042062	TCTGGGATGGGCACTATAGAAATG	59.958	45.833	6.78	0.00	0.00	2.32
637	638	4.242811	TCTGGGATGGGCACTATAGAAAT	58.757	43.478	6.78	0.00	0.00	2.17
638	639	3.664320	TCTGGGATGGGCACTATAGAAA	58.336	45.455	6.78	0.00	0.00	2.52
639	640	3.344535	TCTGGGATGGGCACTATAGAA	57.655	47.619	6.78	0.00	0.00	2.10
640	641	3.445008	GATCTGGGATGGGCACTATAGA	58.555	50.000	6.78	0.00	0.00	1.98
641	642	2.503356	GGATCTGGGATGGGCACTATAG	59.497	54.545	0.00	0.00	0.00	1.31
642	643	2.551270	GGATCTGGGATGGGCACTATA	58.449	52.381	0.00	0.00	0.00	1.31
643	644	1.366319	GGATCTGGGATGGGCACTAT	58.634	55.000	0.00	0.00	0.00	2.12
644	645	1.121407	CGGATCTGGGATGGGCACTA	61.121	60.000	0.00	0.00	0.00	2.74
645	646	2.446848	CGGATCTGGGATGGGCACT	61.447	63.158	0.00	0.00	0.00	4.40
646	647	2.111878	CGGATCTGGGATGGGCAC	59.888	66.667	0.00	0.00	0.00	5.01
647	648	2.040988	TCGGATCTGGGATGGGCA	60.041	61.111	0.62	0.00	0.00	5.36
648	649	2.427753	GTCGGATCTGGGATGGGC	59.572	66.667	0.62	0.00	0.00	5.36
649	650	2.737180	CGTCGGATCTGGGATGGG	59.263	66.667	0.62	0.00	0.00	4.00
650	651	2.737180	CCGTCGGATCTGGGATGG	59.263	66.667	4.91	4.00	33.33	3.51
651	652	2.029666	GCCGTCGGATCTGGGATG	59.970	66.667	17.49	0.00	0.00	3.51
652	653	2.367586	TAGGCCGTCGGATCTGGGAT	62.368	60.000	17.49	0.00	0.00	3.85
653	654	2.978298	CTAGGCCGTCGGATCTGGGA	62.978	65.000	17.49	0.00	0.00	4.37
654	655	2.520982	TAGGCCGTCGGATCTGGG	60.521	66.667	17.49	0.00	0.00	4.45
655	656	3.043419	CTAGGCCGTCGGATCTGG	58.957	66.667	17.49	9.63	0.00	3.86
656	657	2.136196	GAGCTAGGCCGTCGGATCTG	62.136	65.000	17.49	2.87	0.00	2.90
657	658	1.899534	GAGCTAGGCCGTCGGATCT	60.900	63.158	17.49	13.78	0.00	2.75
658	659	1.457009	AAGAGCTAGGCCGTCGGATC	61.457	60.000	17.49	6.18	0.00	3.36
659	660	1.455959	AAGAGCTAGGCCGTCGGAT	60.456	57.895	17.49	4.92	0.00	4.18
660	661	2.044252	AAGAGCTAGGCCGTCGGA	60.044	61.111	17.49	0.00	0.00	4.55
661	662	2.413765	GAAGAGCTAGGCCGTCGG	59.586	66.667	6.99	6.99	0.00	4.79
662	663	2.413765	GGAAGAGCTAGGCCGTCG	59.586	66.667	0.00	0.00	0.00	5.12
663	664	1.142097	GTGGAAGAGCTAGGCCGTC	59.858	63.158	0.00	0.00	0.00	4.79
664	665	2.711922	CGTGGAAGAGCTAGGCCGT	61.712	63.158	0.00	0.00	0.00	5.68
665	666	2.105128	CGTGGAAGAGCTAGGCCG	59.895	66.667	0.00	0.00	0.00	6.13
666	667	2.202946	GCGTGGAAGAGCTAGGCC	60.203	66.667	0.00	0.00	33.39	5.19
667	668	2.583593	CGCGTGGAAGAGCTAGGC	60.584	66.667	0.00	0.00	35.78	3.93
668	669	2.583593	GCGCGTGGAAGAGCTAGG	60.584	66.667	8.43	0.00	34.09	3.02
669	670	1.587613	GAGCGCGTGGAAGAGCTAG	60.588	63.158	8.43	0.00	46.85	3.42
670	671	1.873270	TTGAGCGCGTGGAAGAGCTA	61.873	55.000	8.43	0.00	46.85	3.32
672	673	2.029904	GATTGAGCGCGTGGAAGAGC	62.030	60.000	8.43	0.00	37.19	4.09
673	674	1.746727	CGATTGAGCGCGTGGAAGAG	61.747	60.000	8.43	0.00	0.00	2.85
674	675	1.805539	CGATTGAGCGCGTGGAAGA	60.806	57.895	8.43	0.00	0.00	2.87
675	676	2.697425	CGATTGAGCGCGTGGAAG	59.303	61.111	8.43	0.00	0.00	3.46
676	677	2.813474	CCGATTGAGCGCGTGGAA	60.813	61.111	8.43	0.00	0.00	3.53
679	680	4.214383	CAGCCGATTGAGCGCGTG	62.214	66.667	8.43	0.00	34.64	5.34
683	684	1.089481	TTTAGGCAGCCGATTGAGCG	61.089	55.000	5.55	0.00	34.64	5.03
684	685	1.094785	TTTTAGGCAGCCGATTGAGC	58.905	50.000	5.55	0.00	0.00	4.26
685	686	2.352960	GAGTTTTAGGCAGCCGATTGAG	59.647	50.000	5.55	0.00	0.00	3.02
686	687	2.290008	TGAGTTTTAGGCAGCCGATTGA	60.290	45.455	5.55	0.00	0.00	2.57
687	688	2.083774	TGAGTTTTAGGCAGCCGATTG	58.916	47.619	5.55	0.00	0.00	2.67
688	689	2.489938	TGAGTTTTAGGCAGCCGATT	57.510	45.000	5.55	0.00	0.00	3.34
689	690	2.092968	TGATGAGTTTTAGGCAGCCGAT	60.093	45.455	5.55	0.00	0.00	4.18
690	691	1.277842	TGATGAGTTTTAGGCAGCCGA	59.722	47.619	5.55	0.00	0.00	5.54
691	692	1.737838	TGATGAGTTTTAGGCAGCCG	58.262	50.000	5.55	0.00	0.00	5.52
692	693	2.159324	GCTTGATGAGTTTTAGGCAGCC	60.159	50.000	1.84	1.84	0.00	4.85
693	694	2.489329	TGCTTGATGAGTTTTAGGCAGC	59.511	45.455	0.00	0.00	0.00	5.25
694	695	4.771590	TTGCTTGATGAGTTTTAGGCAG	57.228	40.909	0.00	0.00	0.00	4.85
695	696	4.556501	CGTTTGCTTGATGAGTTTTAGGCA	60.557	41.667	0.00	0.00	0.00	4.75
696	697	3.914364	CGTTTGCTTGATGAGTTTTAGGC	59.086	43.478	0.00	0.00	0.00	3.93
697	698	5.356882	TCGTTTGCTTGATGAGTTTTAGG	57.643	39.130	0.00	0.00	0.00	2.69
698	699	6.524586	GGATTCGTTTGCTTGATGAGTTTTAG	59.475	38.462	0.00	0.00	0.00	1.85
699	700	6.378582	GGATTCGTTTGCTTGATGAGTTTTA	58.621	36.000	0.00	0.00	0.00	1.52
700	701	5.222631	GGATTCGTTTGCTTGATGAGTTTT	58.777	37.500	0.00	0.00	0.00	2.43
701	702	4.613622	CGGATTCGTTTGCTTGATGAGTTT	60.614	41.667	0.00	0.00	0.00	2.66
702	703	3.120199	CGGATTCGTTTGCTTGATGAGTT	60.120	43.478	0.00	0.00	0.00	3.01
703	704	2.416547	CGGATTCGTTTGCTTGATGAGT	59.583	45.455	0.00	0.00	0.00	3.41
704	705	2.672874	TCGGATTCGTTTGCTTGATGAG	59.327	45.455	0.00	0.00	37.69	2.90
705	706	2.415168	GTCGGATTCGTTTGCTTGATGA	59.585	45.455	0.00	0.00	37.69	2.92
706	707	2.774007	GTCGGATTCGTTTGCTTGATG	58.226	47.619	0.00	0.00	37.69	3.07
707	708	1.393539	CGTCGGATTCGTTTGCTTGAT	59.606	47.619	0.00	0.00	37.69	2.57
708	709	0.787787	CGTCGGATTCGTTTGCTTGA	59.212	50.000	0.00	0.00	37.69	3.02
709	710	0.179225	CCGTCGGATTCGTTTGCTTG	60.179	55.000	4.91	0.00	37.69	4.01
710	711	1.908066	GCCGTCGGATTCGTTTGCTT	61.908	55.000	17.49	0.00	37.69	3.91
711	712	2.388232	GCCGTCGGATTCGTTTGCT	61.388	57.895	17.49	0.00	37.69	3.91
712	713	2.097728	GCCGTCGGATTCGTTTGC	59.902	61.111	17.49	0.00	37.69	3.68
713	714	2.746803	GGGCCGTCGGATTCGTTTG	61.747	63.158	17.49	0.00	37.69	2.93
714	715	2.435410	GGGCCGTCGGATTCGTTT	60.435	61.111	17.49	0.00	37.69	3.60
715	716	3.697747	TGGGCCGTCGGATTCGTT	61.698	61.111	17.49	0.00	37.69	3.85
716	717	4.446413	GTGGGCCGTCGGATTCGT	62.446	66.667	17.49	0.00	37.69	3.85
718	719	3.441011	ATCGTGGGCCGTCGGATTC	62.441	63.158	17.49	3.64	37.94	2.52
719	720	3.441011	GATCGTGGGCCGTCGGATT	62.441	63.158	17.49	6.43	37.94	3.01
720	721	3.912907	GATCGTGGGCCGTCGGAT	61.913	66.667	17.49	9.13	37.94	4.18
728	729	4.521062	AGCTCAGCGATCGTGGGC	62.521	66.667	25.40	25.40	42.18	5.36
729	730	2.279120	GAGCTCAGCGATCGTGGG	60.279	66.667	17.81	14.22	0.00	4.61
730	731	1.588403	CAGAGCTCAGCGATCGTGG	60.588	63.158	17.77	9.35	32.02	4.94
731	732	0.591994	CTCAGAGCTCAGCGATCGTG	60.592	60.000	17.77	13.42	32.02	4.35
732	733	1.723608	CCTCAGAGCTCAGCGATCGT	61.724	60.000	17.77	0.26	32.02	3.73
733	734	1.008652	CCTCAGAGCTCAGCGATCG	60.009	63.158	17.77	11.69	32.02	3.69
734	735	0.311790	CTCCTCAGAGCTCAGCGATC	59.688	60.000	17.77	0.00	32.13	3.69
735	736	1.108727	CCTCCTCAGAGCTCAGCGAT	61.109	60.000	17.77	0.00	38.96	4.58
736	737	1.752310	CCTCCTCAGAGCTCAGCGA	60.752	63.158	17.77	8.37	38.96	4.93
737	738	2.806929	CCTCCTCAGAGCTCAGCG	59.193	66.667	17.77	2.25	38.96	5.18
738	739	1.616091	AAGCCTCCTCAGAGCTCAGC	61.616	60.000	17.77	6.71	38.96	4.26
739	740	0.176219	CAAGCCTCCTCAGAGCTCAG	59.824	60.000	17.77	8.39	38.96	3.35
740	741	0.543883	ACAAGCCTCCTCAGAGCTCA	60.544	55.000	17.77	0.00	38.96	4.26
741	742	1.479709	TACAAGCCTCCTCAGAGCTC	58.520	55.000	5.27	5.27	38.96	4.09
742	743	1.944177	TTACAAGCCTCCTCAGAGCT	58.056	50.000	0.00	0.00	38.96	4.09
743	744	2.770164	TTTACAAGCCTCCTCAGAGC	57.230	50.000	0.00	0.00	38.96	4.09
744	745	4.389374	TGTTTTTACAAGCCTCCTCAGAG	58.611	43.478	0.00	0.00	40.09	3.35
745	746	4.431416	TGTTTTTACAAGCCTCCTCAGA	57.569	40.909	0.00	0.00	0.00	3.27
746	747	4.156739	GGATGTTTTTACAAGCCTCCTCAG	59.843	45.833	0.00	0.00	28.88	3.35
747	748	4.079253	GGATGTTTTTACAAGCCTCCTCA	58.921	43.478	0.00	0.00	28.88	3.86
748	749	4.336280	AGGATGTTTTTACAAGCCTCCTC	58.664	43.478	0.00	0.00	34.47	3.71
749	750	4.388577	AGGATGTTTTTACAAGCCTCCT	57.611	40.909	0.00	0.00	34.65	3.69
750	751	4.767409	AGAAGGATGTTTTTACAAGCCTCC	59.233	41.667	0.00	0.00	30.77	4.30
751	752	5.966742	AGAAGGATGTTTTTACAAGCCTC	57.033	39.130	0.00	0.00	31.16	4.70
752	753	6.731292	AAAGAAGGATGTTTTTACAAGCCT	57.269	33.333	0.00	0.00	32.31	4.58
753	754	9.489084	AATAAAAGAAGGATGTTTTTACAAGCC	57.511	29.630	0.00	0.00	34.28	4.35
763	764	9.933723	CAAATCCAGAAATAAAAGAAGGATGTT	57.066	29.630	0.00	0.00	34.81	2.71
764	765	9.093458	ACAAATCCAGAAATAAAAGAAGGATGT	57.907	29.630	0.00	0.00	34.81	3.06
765	766	9.362539	CACAAATCCAGAAATAAAAGAAGGATG	57.637	33.333	0.00	0.00	34.81	3.51
766	767	8.534496	CCACAAATCCAGAAATAAAAGAAGGAT	58.466	33.333	0.00	0.00	36.02	3.24
767	768	7.525360	GCCACAAATCCAGAAATAAAAGAAGGA	60.525	37.037	0.00	0.00	0.00	3.36
768	769	6.591448	GCCACAAATCCAGAAATAAAAGAAGG	59.409	38.462	0.00	0.00	0.00	3.46
769	770	6.591448	GGCCACAAATCCAGAAATAAAAGAAG	59.409	38.462	0.00	0.00	0.00	2.85
770	771	6.269769	AGGCCACAAATCCAGAAATAAAAGAA	59.730	34.615	5.01	0.00	0.00	2.52
771	772	5.779771	AGGCCACAAATCCAGAAATAAAAGA	59.220	36.000	5.01	0.00	0.00	2.52
772	773	6.041423	AGGCCACAAATCCAGAAATAAAAG	57.959	37.500	5.01	0.00	0.00	2.27
773	774	6.183361	ACAAGGCCACAAATCCAGAAATAAAA	60.183	34.615	5.01	0.00	0.00	1.52
774	775	5.306678	ACAAGGCCACAAATCCAGAAATAAA	59.693	36.000	5.01	0.00	0.00	1.40
775	776	4.837860	ACAAGGCCACAAATCCAGAAATAA	59.162	37.500	5.01	0.00	0.00	1.40
776	777	4.415596	ACAAGGCCACAAATCCAGAAATA	58.584	39.130	5.01	0.00	0.00	1.40
777	778	3.242011	ACAAGGCCACAAATCCAGAAAT	58.758	40.909	5.01	0.00	0.00	2.17
778	779	2.676748	ACAAGGCCACAAATCCAGAAA	58.323	42.857	5.01	0.00	0.00	2.52
779	780	2.380064	ACAAGGCCACAAATCCAGAA	57.620	45.000	5.01	0.00	0.00	3.02
780	781	3.737559	ATACAAGGCCACAAATCCAGA	57.262	42.857	5.01	0.00	0.00	3.86
781	782	7.581213	TTTATATACAAGGCCACAAATCCAG	57.419	36.000	5.01	0.00	0.00	3.86
782	783	7.962995	TTTTATATACAAGGCCACAAATCCA	57.037	32.000	5.01	0.00	0.00	3.41
783	784	9.260002	CATTTTTATATACAAGGCCACAAATCC	57.740	33.333	5.01	0.00	0.00	3.01
786	787	7.978975	GCTCATTTTTATATACAAGGCCACAAA	59.021	33.333	5.01	0.00	0.00	2.83
787	788	7.417342	GGCTCATTTTTATATACAAGGCCACAA	60.417	37.037	5.01	0.00	35.37	3.33
788	789	6.040391	GGCTCATTTTTATATACAAGGCCACA	59.960	38.462	5.01	0.00	35.37	4.17
789	790	6.447162	GGCTCATTTTTATATACAAGGCCAC	58.553	40.000	5.01	0.00	35.37	5.01
790	791	5.240623	CGGCTCATTTTTATATACAAGGCCA	59.759	40.000	5.01	0.00	35.03	5.36
791	792	5.240844	ACGGCTCATTTTTATATACAAGGCC	59.759	40.000	0.00	0.00	0.00	5.19
792	793	6.313744	ACGGCTCATTTTTATATACAAGGC	57.686	37.500	0.00	0.00	0.00	4.35
795	796	9.562408	TGGATAACGGCTCATTTTTATATACAA	57.438	29.630	0.00	0.00	0.00	2.41
796	797	9.562408	TTGGATAACGGCTCATTTTTATATACA	57.438	29.630	0.00	0.00	0.00	2.29
799	800	8.908903	TGTTTGGATAACGGCTCATTTTTATAT	58.091	29.630	0.00	0.00	0.00	0.86
800	801	8.282455	TGTTTGGATAACGGCTCATTTTTATA	57.718	30.769	0.00	0.00	0.00	0.98
801	802	7.164230	TGTTTGGATAACGGCTCATTTTTAT	57.836	32.000	0.00	0.00	0.00	1.40
802	803	6.576662	TGTTTGGATAACGGCTCATTTTTA	57.423	33.333	0.00	0.00	0.00	1.52
803	804	5.461032	TGTTTGGATAACGGCTCATTTTT	57.539	34.783	0.00	0.00	0.00	1.94
804	805	5.227152	GTTGTTTGGATAACGGCTCATTTT	58.773	37.500	0.00	0.00	0.00	1.82
805	806	4.614993	CGTTGTTTGGATAACGGCTCATTT	60.615	41.667	0.00	0.00	43.79	2.32
806	807	3.119990	CGTTGTTTGGATAACGGCTCATT	60.120	43.478	0.00	0.00	43.79	2.57
807	808	2.418628	CGTTGTTTGGATAACGGCTCAT	59.581	45.455	0.00	0.00	43.79	2.90
808	809	1.801771	CGTTGTTTGGATAACGGCTCA	59.198	47.619	0.00	0.00	43.79	4.26
809	810	2.070783	TCGTTGTTTGGATAACGGCTC	58.929	47.619	9.25	0.00	46.34	4.70
810	811	2.172851	TCGTTGTTTGGATAACGGCT	57.827	45.000	9.25	0.00	46.34	5.52
811	812	2.846693	CTTCGTTGTTTGGATAACGGC	58.153	47.619	9.25	0.00	46.34	5.68
812	813	2.413634	GGCTTCGTTGTTTGGATAACGG	60.414	50.000	9.25	0.00	46.34	4.44
814	815	2.413634	CCGGCTTCGTTGTTTGGATAAC	60.414	50.000	0.00	0.00	0.00	1.89
815	816	1.807742	CCGGCTTCGTTGTTTGGATAA	59.192	47.619	0.00	0.00	0.00	1.75
816	817	1.444836	CCGGCTTCGTTGTTTGGATA	58.555	50.000	0.00	0.00	0.00	2.59
817	818	1.862602	GCCGGCTTCGTTGTTTGGAT	61.863	55.000	22.15	0.00	0.00	3.41
818	819	2.548295	GCCGGCTTCGTTGTTTGGA	61.548	57.895	22.15	0.00	0.00	3.53
819	820	2.050442	GCCGGCTTCGTTGTTTGG	60.050	61.111	22.15	0.00	0.00	3.28
820	821	0.934436	CTTGCCGGCTTCGTTGTTTG	60.934	55.000	29.70	1.42	0.00	2.93
821	822	1.358759	CTTGCCGGCTTCGTTGTTT	59.641	52.632	29.70	0.00	0.00	2.83
822	823	3.030652	CTTGCCGGCTTCGTTGTT	58.969	55.556	29.70	0.00	0.00	2.83
823	824	3.660111	GCTTGCCGGCTTCGTTGT	61.660	61.111	29.70	0.00	0.00	3.32
824	825	4.404654	GGCTTGCCGGCTTCGTTG	62.405	66.667	29.70	11.79	34.85	4.10
847	848	0.109365	TCATGGCGCAATTCGTTTGG	60.109	50.000	10.83	0.00	41.07	3.28
889	890	1.372997	CGAACCAGGTGTCCGACTG	60.373	63.158	0.00	0.00	34.54	3.51
1411	1412	1.828660	CGGTAGGGGTGAGCTCGAT	60.829	63.158	9.64	0.00	0.00	3.59
1606	1607	7.456253	GTTGCTATTCACAACACATACTACAG	58.544	38.462	1.95	0.00	45.35	2.74
1607	1608	6.090223	CGTTGCTATTCACAACACATACTACA	59.910	38.462	7.34	0.00	46.14	2.74
1665	1684	1.573829	ATTGTGCGCACAGTTACCGG	61.574	55.000	38.37	0.00	42.94	5.28
1713	1732	3.504906	CAGTCATGTTTGGAGTCTGCAAT	59.495	43.478	7.69	0.00	0.00	3.56
1793	1812	9.950680	AAGAAAAATCATAGTAATACATTGGCG	57.049	29.630	0.00	0.00	0.00	5.69
1909	1929	6.785963	CCTACTAATGAAATACCCCCTCTGTA	59.214	42.308	0.00	0.00	0.00	2.74
1910	1930	5.607171	CCTACTAATGAAATACCCCCTCTGT	59.393	44.000	0.00	0.00	0.00	3.41
1913	1933	5.160386	TCCCTACTAATGAAATACCCCCTC	58.840	45.833	0.00	0.00	0.00	4.30
1918	1938	6.742559	TGACCTCCCTACTAATGAAATACC	57.257	41.667	0.00	0.00	0.00	2.73
1975	1995	1.338973	CATTGAGCACCCATGTATGGC	59.661	52.381	5.35	0.00	46.70	4.40
1994	2015	0.832135	ACTCCTTCGGTTCTGCTCCA	60.832	55.000	0.00	0.00	0.00	3.86
2001	2022	2.151202	TCAATTGCACTCCTTCGGTTC	58.849	47.619	0.00	0.00	0.00	3.62
2007	2028	7.951347	AGATTCTTAATCAATTGCACTCCTT	57.049	32.000	0.00	0.00	40.42	3.36
2035	2056	4.751600	CGTCACATCATAATGCACATAGGT	59.248	41.667	0.00	0.00	36.26	3.08
2036	2057	4.990426	TCGTCACATCATAATGCACATAGG	59.010	41.667	0.00	0.00	36.26	2.57
2037	2058	5.107337	GGTCGTCACATCATAATGCACATAG	60.107	44.000	0.00	0.00	36.26	2.23
2038	2059	4.749598	GGTCGTCACATCATAATGCACATA	59.250	41.667	0.00	0.00	36.26	2.29
2039	2060	3.561310	GGTCGTCACATCATAATGCACAT	59.439	43.478	0.00	0.00	36.26	3.21
2040	2061	2.935849	GGTCGTCACATCATAATGCACA	59.064	45.455	0.00	0.00	36.26	4.57
2041	2062	3.198068	AGGTCGTCACATCATAATGCAC	58.802	45.455	0.00	0.00	36.26	4.57
2042	2063	3.541996	AGGTCGTCACATCATAATGCA	57.458	42.857	0.00	0.00	36.26	3.96
2043	2064	4.991056	ACATAGGTCGTCACATCATAATGC	59.009	41.667	0.00	0.00	36.26	3.56
2044	2065	5.107337	GCACATAGGTCGTCACATCATAATG	60.107	44.000	0.00	0.00	38.93	1.90
2045	2066	4.991056	GCACATAGGTCGTCACATCATAAT	59.009	41.667	0.00	0.00	0.00	1.28
2046	2067	4.142049	TGCACATAGGTCGTCACATCATAA	60.142	41.667	0.00	0.00	0.00	1.90
2047	2068	3.383185	TGCACATAGGTCGTCACATCATA	59.617	43.478	0.00	0.00	0.00	2.15
2048	2069	2.168313	TGCACATAGGTCGTCACATCAT	59.832	45.455	0.00	0.00	0.00	2.45
2049	2070	1.548269	TGCACATAGGTCGTCACATCA	59.452	47.619	0.00	0.00	0.00	3.07
2050	2071	2.293677	TGCACATAGGTCGTCACATC	57.706	50.000	0.00	0.00	0.00	3.06
2051	2072	2.988010	ATGCACATAGGTCGTCACAT	57.012	45.000	0.00	0.00	0.00	3.21
2052	2073	2.760634	AATGCACATAGGTCGTCACA	57.239	45.000	0.00	0.00	0.00	3.58
2053	2074	4.368315	TCATAATGCACATAGGTCGTCAC	58.632	43.478	0.00	0.00	0.00	3.67
2054	2075	4.664150	TCATAATGCACATAGGTCGTCA	57.336	40.909	0.00	0.00	0.00	4.35
2055	2076	4.991056	ACATCATAATGCACATAGGTCGTC	59.009	41.667	0.00	0.00	36.26	4.20
2056	2077	4.751600	CACATCATAATGCACATAGGTCGT	59.248	41.667	0.00	0.00	36.26	4.34
2057	2078	4.990426	TCACATCATAATGCACATAGGTCG	59.010	41.667	0.00	0.00	36.26	4.79
2058	2079	6.226052	TCTCACATCATAATGCACATAGGTC	58.774	40.000	0.00	0.00	36.26	3.85
2115	2136	7.737869	TCTATAATTTGCATCATGGCCAAAAT	58.262	30.769	10.96	7.33	0.00	1.82
2228	2250	9.768662	CTTAATTCCTCCCCATTCAATTAAATG	57.231	33.333	0.00	0.00	36.57	2.32
2240	2262	6.295041	TCTATCTCTCTTAATTCCTCCCCA	57.705	41.667	0.00	0.00	0.00	4.96
2241	2263	8.340757	TCTATCTATCTCTCTTAATTCCTCCCC	58.659	40.741	0.00	0.00	0.00	4.81
2243	2265	9.408648	CCTCTATCTATCTCTCTTAATTCCTCC	57.591	40.741	0.00	0.00	0.00	4.30
2272	2294	0.107654	ACAGACTTTCCTATGCCCGC	60.108	55.000	0.00	0.00	0.00	6.13
2297	2321	7.826252	ACTGTGCACATTAGATCTAACAAATCT	59.174	33.333	22.00	0.00	37.29	2.40
2338	2362	5.923733	ATTAACCACCACACACAAAAAGA	57.076	34.783	0.00	0.00	0.00	2.52
2339	2363	5.872070	ACAATTAACCACCACACACAAAAAG	59.128	36.000	0.00	0.00	0.00	2.27
2539	2570	4.793731	TCGTTCTCGATCTCAAAGATTTCG	59.206	41.667	0.00	0.00	41.35	3.46
2646	2677	4.701765	ACCAAGAATAGCAGCATAGACAG	58.298	43.478	0.00	0.00	0.00	3.51
2673	2704	3.853207	ACTGGAGGTAAGGACTTGTACA	58.147	45.455	0.00	0.00	0.00	2.90
2728	2763	5.449999	GGTTTTCTGTTTTCACCGACTCATT	60.450	40.000	0.00	0.00	0.00	2.57
2821	2858	4.526262	TCAACCATTTCGAAACCATCCATT	59.474	37.500	13.81	0.00	0.00	3.16
2996	3035	2.165437	ACAACACACAGGTTCGCAATTT	59.835	40.909	0.00	0.00	0.00	1.82
3079	3118	8.244113	CAGTTTTCTCCAACTTATCCATAAACC	58.756	37.037	0.00	0.00	34.60	3.27
3163	3270	4.339247	ACAAACATTTCTCAACAGACTGGG	59.661	41.667	7.51	0.00	0.00	4.45
3270	3377	9.084533	ACCAAGTTTCAAATGGCTAAAACTATA	57.915	29.630	0.00	0.00	40.16	1.31
3279	3386	5.869649	AGTTTACCAAGTTTCAAATGGCT	57.130	34.783	0.00	0.00	37.77	4.75
3359	3472	1.003118	TGTCCTTCGCAGGCAATAACT	59.997	47.619	0.00	0.00	40.58	2.24
3363	3476	1.098050	GAATGTCCTTCGCAGGCAAT	58.902	50.000	0.00	0.00	40.58	3.56
3422	3575	9.918630	AAAAATCAGAATGGAAAGATGTTAGTG	57.081	29.630	0.00	0.00	36.16	2.74
3458	3611	7.123997	TGGAATTAGAAAGCTCAATGCCATAAA	59.876	33.333	6.10	0.00	44.23	1.40
3469	3624	5.573337	AGCACAATGGAATTAGAAAGCTC	57.427	39.130	0.00	0.00	32.46	4.09

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.