Multiple sequence alignment - TraesCS1D01G137700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1D01G137700 | chr1D | 100.000 | 3145 | 0 | 0 | 1 | 3145 | 188003216 | 188000072 | 0.000000e+00 | 5808 |
1 | TraesCS1D01G137700 | chr6B | 90.967 | 2358 | 187 | 12 | 811 | 3145 | 333274296 | 333271942 | 0.000000e+00 | 3151 |
2 | TraesCS1D01G137700 | chr6B | 82.972 | 1568 | 201 | 40 | 1638 | 3145 | 57462259 | 57463820 | 0.000000e+00 | 1356 |
3 | TraesCS1D01G137700 | chr6B | 89.196 | 398 | 34 | 9 | 368 | 756 | 333274714 | 333274317 | 3.650000e-134 | 488 |
4 | TraesCS1D01G137700 | chr4B | 85.007 | 1474 | 184 | 28 | 1702 | 3145 | 187072782 | 187074248 | 0.000000e+00 | 1463 |
5 | TraesCS1D01G137700 | chr4B | 83.109 | 1563 | 204 | 36 | 1638 | 3145 | 664312932 | 664314489 | 0.000000e+00 | 1369 |
6 | TraesCS1D01G137700 | chr4B | 82.357 | 1570 | 209 | 42 | 1638 | 3145 | 542041021 | 542039458 | 0.000000e+00 | 1303 |
7 | TraesCS1D01G137700 | chr4B | 91.695 | 590 | 43 | 5 | 2158 | 2743 | 496567004 | 496566417 | 0.000000e+00 | 813 |
8 | TraesCS1D01G137700 | chr4B | 94.349 | 407 | 23 | 0 | 2739 | 3145 | 496554439 | 496554033 | 2.660000e-175 | 625 |
9 | TraesCS1D01G137700 | chr4B | 91.463 | 246 | 17 | 2 | 368 | 612 | 364033518 | 364033760 | 5.030000e-88 | 335 |
10 | TraesCS1D01G137700 | chr6A | 85.265 | 1432 | 175 | 28 | 1702 | 3103 | 530131796 | 530130371 | 0.000000e+00 | 1443 |
11 | TraesCS1D01G137700 | chr4A | 83.640 | 1467 | 183 | 31 | 1735 | 3145 | 605071956 | 605070491 | 0.000000e+00 | 1327 |
12 | TraesCS1D01G137700 | chr4A | 85.356 | 519 | 36 | 21 | 368 | 869 | 571337582 | 571338077 | 4.680000e-138 | 501 |
13 | TraesCS1D01G137700 | chr4A | 90.400 | 250 | 18 | 4 | 368 | 615 | 468762603 | 468762358 | 1.090000e-84 | 324 |
14 | TraesCS1D01G137700 | chr5A | 83.572 | 1467 | 184 | 33 | 1735 | 3145 | 40353853 | 40352388 | 0.000000e+00 | 1321 |
15 | TraesCS1D01G137700 | chr2D | 83.345 | 1471 | 183 | 39 | 1735 | 3145 | 398630095 | 398628627 | 0.000000e+00 | 1303 |
16 | TraesCS1D01G137700 | chr2D | 97.011 | 368 | 10 | 1 | 1 | 367 | 137330734 | 137331101 | 4.460000e-173 | 617 |
17 | TraesCS1D01G137700 | chr2B | 83.652 | 1413 | 198 | 21 | 1760 | 3145 | 439200736 | 439199330 | 0.000000e+00 | 1299 |
18 | TraesCS1D01G137700 | chr2B | 89.130 | 276 | 21 | 6 | 368 | 641 | 556674133 | 556673865 | 5.030000e-88 | 335 |
19 | TraesCS1D01G137700 | chr5B | 83.242 | 1456 | 188 | 33 | 1735 | 3145 | 134932172 | 134930728 | 0.000000e+00 | 1286 |
20 | TraesCS1D01G137700 | chr1B | 86.037 | 1017 | 93 | 27 | 368 | 1342 | 502239570 | 502238561 | 0.000000e+00 | 1046 |
21 | TraesCS1D01G137700 | chr3D | 85.230 | 914 | 121 | 11 | 2244 | 3145 | 429380226 | 429379315 | 0.000000e+00 | 928 |
22 | TraesCS1D01G137700 | chr7A | 89.236 | 641 | 68 | 1 | 2506 | 3145 | 448075577 | 448074937 | 0.000000e+00 | 800 |
23 | TraesCS1D01G137700 | chr7A | 83.019 | 742 | 99 | 17 | 1735 | 2449 | 448076402 | 448075661 | 0.000000e+00 | 647 |
24 | TraesCS1D01G137700 | chr7A | 97.283 | 368 | 9 | 1 | 1 | 367 | 286734398 | 286734031 | 9.580000e-175 | 623 |
25 | TraesCS1D01G137700 | chr5D | 97.011 | 368 | 10 | 1 | 1 | 367 | 36888275 | 36887908 | 4.460000e-173 | 617 |
26 | TraesCS1D01G137700 | chr5D | 96.739 | 368 | 11 | 1 | 1 | 367 | 270074471 | 270074838 | 2.070000e-171 | 612 |
27 | TraesCS1D01G137700 | chr5D | 96.196 | 368 | 12 | 2 | 1 | 367 | 333954258 | 333953892 | 4.490000e-168 | 601 |
28 | TraesCS1D01G137700 | chr7D | 96.467 | 368 | 12 | 1 | 1 | 367 | 175787454 | 175787087 | 9.650000e-170 | 606 |
29 | TraesCS1D01G137700 | chr7D | 96.467 | 368 | 12 | 1 | 1 | 367 | 299026231 | 299026598 | 9.650000e-170 | 606 |
30 | TraesCS1D01G137700 | chr7D | 91.200 | 250 | 17 | 3 | 368 | 615 | 543586593 | 543586347 | 5.030000e-88 | 335 |
31 | TraesCS1D01G137700 | chr6D | 96.467 | 368 | 11 | 2 | 1 | 367 | 129871871 | 129872237 | 9.650000e-170 | 606 |
32 | TraesCS1D01G137700 | chr4D | 95.924 | 368 | 14 | 1 | 1 | 367 | 331835331 | 331835698 | 2.090000e-166 | 595 |
33 | TraesCS1D01G137700 | chr1A | 92.713 | 247 | 13 | 3 | 368 | 612 | 337701710 | 337701953 | 4.990000e-93 | 351 |
34 | TraesCS1D01G137700 | chrUn | 92.032 | 251 | 14 | 4 | 368 | 615 | 10301110 | 10300863 | 6.460000e-92 | 348 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1D01G137700 | chr1D | 188000072 | 188003216 | 3144 | True | 5808.0 | 5808 | 100.0000 | 1 | 3145 | 1 | chr1D.!!$R1 | 3144 |
1 | TraesCS1D01G137700 | chr6B | 333271942 | 333274714 | 2772 | True | 1819.5 | 3151 | 90.0815 | 368 | 3145 | 2 | chr6B.!!$R1 | 2777 |
2 | TraesCS1D01G137700 | chr6B | 57462259 | 57463820 | 1561 | False | 1356.0 | 1356 | 82.9720 | 1638 | 3145 | 1 | chr6B.!!$F1 | 1507 |
3 | TraesCS1D01G137700 | chr4B | 187072782 | 187074248 | 1466 | False | 1463.0 | 1463 | 85.0070 | 1702 | 3145 | 1 | chr4B.!!$F1 | 1443 |
4 | TraesCS1D01G137700 | chr4B | 664312932 | 664314489 | 1557 | False | 1369.0 | 1369 | 83.1090 | 1638 | 3145 | 1 | chr4B.!!$F3 | 1507 |
5 | TraesCS1D01G137700 | chr4B | 542039458 | 542041021 | 1563 | True | 1303.0 | 1303 | 82.3570 | 1638 | 3145 | 1 | chr4B.!!$R3 | 1507 |
6 | TraesCS1D01G137700 | chr4B | 496566417 | 496567004 | 587 | True | 813.0 | 813 | 91.6950 | 2158 | 2743 | 1 | chr4B.!!$R2 | 585 |
7 | TraesCS1D01G137700 | chr6A | 530130371 | 530131796 | 1425 | True | 1443.0 | 1443 | 85.2650 | 1702 | 3103 | 1 | chr6A.!!$R1 | 1401 |
8 | TraesCS1D01G137700 | chr4A | 605070491 | 605071956 | 1465 | True | 1327.0 | 1327 | 83.6400 | 1735 | 3145 | 1 | chr4A.!!$R2 | 1410 |
9 | TraesCS1D01G137700 | chr5A | 40352388 | 40353853 | 1465 | True | 1321.0 | 1321 | 83.5720 | 1735 | 3145 | 1 | chr5A.!!$R1 | 1410 |
10 | TraesCS1D01G137700 | chr2D | 398628627 | 398630095 | 1468 | True | 1303.0 | 1303 | 83.3450 | 1735 | 3145 | 1 | chr2D.!!$R1 | 1410 |
11 | TraesCS1D01G137700 | chr2B | 439199330 | 439200736 | 1406 | True | 1299.0 | 1299 | 83.6520 | 1760 | 3145 | 1 | chr2B.!!$R1 | 1385 |
12 | TraesCS1D01G137700 | chr5B | 134930728 | 134932172 | 1444 | True | 1286.0 | 1286 | 83.2420 | 1735 | 3145 | 1 | chr5B.!!$R1 | 1410 |
13 | TraesCS1D01G137700 | chr1B | 502238561 | 502239570 | 1009 | True | 1046.0 | 1046 | 86.0370 | 368 | 1342 | 1 | chr1B.!!$R1 | 974 |
14 | TraesCS1D01G137700 | chr3D | 429379315 | 429380226 | 911 | True | 928.0 | 928 | 85.2300 | 2244 | 3145 | 1 | chr3D.!!$R1 | 901 |
15 | TraesCS1D01G137700 | chr7A | 448074937 | 448076402 | 1465 | True | 723.5 | 800 | 86.1275 | 1735 | 3145 | 2 | chr7A.!!$R2 | 1410 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
74 | 75 | 0.031721 | GGGCTACTACGTTCATCCGG | 59.968 | 60.0 | 0.0 | 0.0 | 0.00 | 5.14 | F |
75 | 76 | 0.031721 | GGCTACTACGTTCATCCGGG | 59.968 | 60.0 | 0.0 | 0.0 | 0.00 | 5.73 | F |
1284 | 1350 | 0.039617 | CATTTGCTCCGCCAACGAAA | 60.040 | 50.0 | 0.0 | 0.0 | 43.93 | 3.46 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1012 | 1066 | 0.105778 | GCCTCCTGGATGTCTGCTAC | 59.894 | 60.000 | 0.00 | 0.00 | 34.57 | 3.58 | R |
1999 | 2087 | 1.003580 | TCTCCATGCTCACTTTCCCAC | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 | R |
2471 | 2604 | 1.992667 | GGCAAAAGCTTAATGAACCGC | 59.007 | 47.619 | 14.52 | 2.96 | 0.00 | 5.68 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
57 | 58 | 6.773976 | TGCAGAGTAAATAAAAATGGAGGG | 57.226 | 37.500 | 0.00 | 0.00 | 0.00 | 4.30 |
58 | 59 | 5.127031 | TGCAGAGTAAATAAAAATGGAGGGC | 59.873 | 40.000 | 0.00 | 0.00 | 0.00 | 5.19 |
59 | 60 | 5.360999 | GCAGAGTAAATAAAAATGGAGGGCT | 59.639 | 40.000 | 0.00 | 0.00 | 0.00 | 5.19 |
60 | 61 | 6.546034 | GCAGAGTAAATAAAAATGGAGGGCTA | 59.454 | 38.462 | 0.00 | 0.00 | 0.00 | 3.93 |
61 | 62 | 7.468768 | GCAGAGTAAATAAAAATGGAGGGCTAC | 60.469 | 40.741 | 0.00 | 0.00 | 0.00 | 3.58 |
62 | 63 | 7.775561 | CAGAGTAAATAAAAATGGAGGGCTACT | 59.224 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
63 | 64 | 8.999895 | AGAGTAAATAAAAATGGAGGGCTACTA | 58.000 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
64 | 65 | 8.975663 | AGTAAATAAAAATGGAGGGCTACTAC | 57.024 | 34.615 | 0.00 | 0.00 | 0.00 | 2.73 |
65 | 66 | 6.937436 | AAATAAAAATGGAGGGCTACTACG | 57.063 | 37.500 | 0.00 | 0.00 | 30.06 | 3.51 |
66 | 67 | 3.994931 | AAAAATGGAGGGCTACTACGT | 57.005 | 42.857 | 0.00 | 0.00 | 30.06 | 3.57 |
67 | 68 | 3.994931 | AAAATGGAGGGCTACTACGTT | 57.005 | 42.857 | 0.00 | 0.00 | 41.13 | 3.99 |
68 | 69 | 3.538634 | AAATGGAGGGCTACTACGTTC | 57.461 | 47.619 | 0.00 | 0.00 | 38.34 | 3.95 |
69 | 70 | 2.154567 | ATGGAGGGCTACTACGTTCA | 57.845 | 50.000 | 0.00 | 0.00 | 30.06 | 3.18 |
70 | 71 | 2.154567 | TGGAGGGCTACTACGTTCAT | 57.845 | 50.000 | 0.00 | 0.00 | 30.06 | 2.57 |
71 | 72 | 2.029623 | TGGAGGGCTACTACGTTCATC | 58.970 | 52.381 | 0.00 | 0.00 | 30.06 | 2.92 |
72 | 73 | 1.340568 | GGAGGGCTACTACGTTCATCC | 59.659 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
73 | 74 | 1.001597 | GAGGGCTACTACGTTCATCCG | 60.002 | 57.143 | 0.00 | 0.00 | 0.00 | 4.18 |
74 | 75 | 0.031721 | GGGCTACTACGTTCATCCGG | 59.968 | 60.000 | 0.00 | 0.00 | 0.00 | 5.14 |
75 | 76 | 0.031721 | GGCTACTACGTTCATCCGGG | 59.968 | 60.000 | 0.00 | 0.00 | 0.00 | 5.73 |
76 | 77 | 0.743097 | GCTACTACGTTCATCCGGGT | 59.257 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
77 | 78 | 1.135721 | GCTACTACGTTCATCCGGGTT | 59.864 | 52.381 | 0.00 | 0.00 | 0.00 | 4.11 |
78 | 79 | 2.417787 | GCTACTACGTTCATCCGGGTTT | 60.418 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
79 | 80 | 2.845363 | ACTACGTTCATCCGGGTTTT | 57.155 | 45.000 | 0.00 | 0.00 | 0.00 | 2.43 |
80 | 81 | 3.130280 | ACTACGTTCATCCGGGTTTTT | 57.870 | 42.857 | 0.00 | 0.00 | 0.00 | 1.94 |
81 | 82 | 4.270245 | ACTACGTTCATCCGGGTTTTTA | 57.730 | 40.909 | 0.00 | 0.00 | 0.00 | 1.52 |
82 | 83 | 4.248058 | ACTACGTTCATCCGGGTTTTTAG | 58.752 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
83 | 84 | 3.130280 | ACGTTCATCCGGGTTTTTAGT | 57.870 | 42.857 | 0.00 | 0.00 | 0.00 | 2.24 |
84 | 85 | 3.069289 | ACGTTCATCCGGGTTTTTAGTC | 58.931 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
85 | 86 | 2.417586 | CGTTCATCCGGGTTTTTAGTCC | 59.582 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
86 | 87 | 3.414269 | GTTCATCCGGGTTTTTAGTCCA | 58.586 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
87 | 88 | 3.062122 | TCATCCGGGTTTTTAGTCCAC | 57.938 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
88 | 89 | 2.372504 | TCATCCGGGTTTTTAGTCCACA | 59.627 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
89 | 90 | 2.259266 | TCCGGGTTTTTAGTCCACAC | 57.741 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
90 | 91 | 1.202794 | TCCGGGTTTTTAGTCCACACC | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
91 | 92 | 1.477195 | CCGGGTTTTTAGTCCACACCA | 60.477 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
92 | 93 | 2.510613 | CGGGTTTTTAGTCCACACCAT | 58.489 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
93 | 94 | 2.888414 | CGGGTTTTTAGTCCACACCATT | 59.112 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
94 | 95 | 3.319689 | CGGGTTTTTAGTCCACACCATTT | 59.680 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
95 | 96 | 4.202172 | CGGGTTTTTAGTCCACACCATTTT | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
96 | 97 | 5.676552 | GGGTTTTTAGTCCACACCATTTTT | 58.323 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
125 | 126 | 9.520515 | AATCAAAGTCTGACCACATATTTAGTT | 57.479 | 29.630 | 3.76 | 0.00 | 36.69 | 2.24 |
131 | 132 | 9.765795 | AGTCTGACCACATATTTAGTTAATAGC | 57.234 | 33.333 | 3.76 | 0.00 | 32.40 | 2.97 |
132 | 133 | 8.989980 | GTCTGACCACATATTTAGTTAATAGCC | 58.010 | 37.037 | 0.00 | 0.00 | 32.40 | 3.93 |
133 | 134 | 7.870954 | TCTGACCACATATTTAGTTAATAGCCG | 59.129 | 37.037 | 0.00 | 0.00 | 32.40 | 5.52 |
134 | 135 | 6.932400 | TGACCACATATTTAGTTAATAGCCGG | 59.068 | 38.462 | 0.00 | 0.00 | 32.40 | 6.13 |
135 | 136 | 7.069877 | ACCACATATTTAGTTAATAGCCGGA | 57.930 | 36.000 | 5.05 | 0.00 | 32.40 | 5.14 |
136 | 137 | 6.932960 | ACCACATATTTAGTTAATAGCCGGAC | 59.067 | 38.462 | 5.05 | 0.00 | 32.40 | 4.79 |
137 | 138 | 6.932400 | CCACATATTTAGTTAATAGCCGGACA | 59.068 | 38.462 | 5.05 | 0.00 | 32.40 | 4.02 |
138 | 139 | 7.442969 | CCACATATTTAGTTAATAGCCGGACAA | 59.557 | 37.037 | 5.05 | 0.00 | 32.40 | 3.18 |
139 | 140 | 8.832521 | CACATATTTAGTTAATAGCCGGACAAA | 58.167 | 33.333 | 5.05 | 0.00 | 32.40 | 2.83 |
140 | 141 | 9.569122 | ACATATTTAGTTAATAGCCGGACAAAT | 57.431 | 29.630 | 5.05 | 5.21 | 32.40 | 2.32 |
151 | 152 | 5.576447 | AGCCGGACAAATAAAATTACAGG | 57.424 | 39.130 | 5.05 | 0.00 | 0.00 | 4.00 |
152 | 153 | 4.401202 | AGCCGGACAAATAAAATTACAGGG | 59.599 | 41.667 | 5.05 | 0.00 | 0.00 | 4.45 |
153 | 154 | 4.440940 | GCCGGACAAATAAAATTACAGGGG | 60.441 | 45.833 | 5.05 | 0.00 | 0.00 | 4.79 |
154 | 155 | 4.951094 | CCGGACAAATAAAATTACAGGGGA | 59.049 | 41.667 | 0.00 | 0.00 | 0.00 | 4.81 |
155 | 156 | 5.067283 | CCGGACAAATAAAATTACAGGGGAG | 59.933 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
156 | 157 | 5.449999 | CGGACAAATAAAATTACAGGGGAGC | 60.450 | 44.000 | 0.00 | 0.00 | 0.00 | 4.70 |
157 | 158 | 5.656859 | GGACAAATAAAATTACAGGGGAGCT | 59.343 | 40.000 | 0.00 | 0.00 | 0.00 | 4.09 |
158 | 159 | 6.405842 | GGACAAATAAAATTACAGGGGAGCTG | 60.406 | 42.308 | 0.00 | 0.00 | 0.00 | 4.24 |
159 | 160 | 6.252995 | ACAAATAAAATTACAGGGGAGCTGA | 58.747 | 36.000 | 0.00 | 0.00 | 0.00 | 4.26 |
160 | 161 | 6.723977 | ACAAATAAAATTACAGGGGAGCTGAA | 59.276 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
161 | 162 | 7.093771 | ACAAATAAAATTACAGGGGAGCTGAAG | 60.094 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
162 | 163 | 4.657814 | AAAATTACAGGGGAGCTGAAGA | 57.342 | 40.909 | 0.00 | 0.00 | 0.00 | 2.87 |
163 | 164 | 3.636153 | AATTACAGGGGAGCTGAAGAC | 57.364 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
164 | 165 | 2.024176 | TTACAGGGGAGCTGAAGACA | 57.976 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
165 | 166 | 2.024176 | TACAGGGGAGCTGAAGACAA | 57.976 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
166 | 167 | 1.140312 | ACAGGGGAGCTGAAGACAAA | 58.860 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
167 | 168 | 1.072965 | ACAGGGGAGCTGAAGACAAAG | 59.927 | 52.381 | 0.00 | 0.00 | 0.00 | 2.77 |
168 | 169 | 1.072965 | CAGGGGAGCTGAAGACAAAGT | 59.927 | 52.381 | 0.00 | 0.00 | 0.00 | 2.66 |
169 | 170 | 1.777272 | AGGGGAGCTGAAGACAAAGTT | 59.223 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
170 | 171 | 1.882623 | GGGGAGCTGAAGACAAAGTTG | 59.117 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
171 | 172 | 2.576615 | GGGAGCTGAAGACAAAGTTGT | 58.423 | 47.619 | 0.00 | 0.00 | 45.65 | 3.32 |
172 | 173 | 2.291741 | GGGAGCTGAAGACAAAGTTGTG | 59.708 | 50.000 | 0.42 | 0.00 | 42.43 | 3.33 |
173 | 174 | 3.206150 | GGAGCTGAAGACAAAGTTGTGA | 58.794 | 45.455 | 0.42 | 0.00 | 42.43 | 3.58 |
174 | 175 | 3.249559 | GGAGCTGAAGACAAAGTTGTGAG | 59.750 | 47.826 | 0.42 | 0.00 | 42.43 | 3.51 |
175 | 176 | 4.122776 | GAGCTGAAGACAAAGTTGTGAGA | 58.877 | 43.478 | 0.42 | 0.00 | 42.43 | 3.27 |
176 | 177 | 4.517285 | AGCTGAAGACAAAGTTGTGAGAA | 58.483 | 39.130 | 0.42 | 0.00 | 42.43 | 2.87 |
177 | 178 | 4.574013 | AGCTGAAGACAAAGTTGTGAGAAG | 59.426 | 41.667 | 0.42 | 0.00 | 42.43 | 2.85 |
178 | 179 | 4.260948 | GCTGAAGACAAAGTTGTGAGAAGG | 60.261 | 45.833 | 0.42 | 0.00 | 42.43 | 3.46 |
179 | 180 | 3.627577 | TGAAGACAAAGTTGTGAGAAGGC | 59.372 | 43.478 | 0.42 | 0.00 | 42.43 | 4.35 |
180 | 181 | 3.567478 | AGACAAAGTTGTGAGAAGGCT | 57.433 | 42.857 | 0.42 | 0.00 | 42.43 | 4.58 |
181 | 182 | 3.891049 | AGACAAAGTTGTGAGAAGGCTT | 58.109 | 40.909 | 0.00 | 0.00 | 42.43 | 4.35 |
182 | 183 | 5.036117 | AGACAAAGTTGTGAGAAGGCTTA | 57.964 | 39.130 | 0.00 | 0.00 | 42.43 | 3.09 |
183 | 184 | 5.059833 | AGACAAAGTTGTGAGAAGGCTTAG | 58.940 | 41.667 | 0.00 | 0.00 | 42.43 | 2.18 |
184 | 185 | 4.781934 | ACAAAGTTGTGAGAAGGCTTAGT | 58.218 | 39.130 | 0.00 | 0.00 | 40.49 | 2.24 |
185 | 186 | 5.925509 | ACAAAGTTGTGAGAAGGCTTAGTA | 58.074 | 37.500 | 0.00 | 0.00 | 40.49 | 1.82 |
186 | 187 | 6.354130 | ACAAAGTTGTGAGAAGGCTTAGTAA | 58.646 | 36.000 | 0.00 | 0.00 | 40.49 | 2.24 |
187 | 188 | 6.998673 | ACAAAGTTGTGAGAAGGCTTAGTAAT | 59.001 | 34.615 | 0.00 | 0.00 | 40.49 | 1.89 |
188 | 189 | 7.173390 | ACAAAGTTGTGAGAAGGCTTAGTAATC | 59.827 | 37.037 | 0.00 | 0.00 | 40.49 | 1.75 |
189 | 190 | 6.360370 | AGTTGTGAGAAGGCTTAGTAATCA | 57.640 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
190 | 191 | 6.769512 | AGTTGTGAGAAGGCTTAGTAATCAA | 58.230 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
191 | 192 | 7.398024 | AGTTGTGAGAAGGCTTAGTAATCAAT | 58.602 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
192 | 193 | 8.540388 | AGTTGTGAGAAGGCTTAGTAATCAATA | 58.460 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
193 | 194 | 8.604890 | GTTGTGAGAAGGCTTAGTAATCAATAC | 58.395 | 37.037 | 0.00 | 0.00 | 34.52 | 1.89 |
194 | 195 | 7.847096 | TGTGAGAAGGCTTAGTAATCAATACA | 58.153 | 34.615 | 0.00 | 0.00 | 36.94 | 2.29 |
195 | 196 | 8.318412 | TGTGAGAAGGCTTAGTAATCAATACAA | 58.682 | 33.333 | 0.00 | 0.00 | 36.94 | 2.41 |
196 | 197 | 9.162764 | GTGAGAAGGCTTAGTAATCAATACAAA | 57.837 | 33.333 | 0.00 | 0.00 | 36.94 | 2.83 |
197 | 198 | 9.733556 | TGAGAAGGCTTAGTAATCAATACAAAA | 57.266 | 29.630 | 0.00 | 0.00 | 36.94 | 2.44 |
198 | 199 | 9.989869 | GAGAAGGCTTAGTAATCAATACAAAAC | 57.010 | 33.333 | 0.00 | 0.00 | 36.94 | 2.43 |
199 | 200 | 9.740710 | AGAAGGCTTAGTAATCAATACAAAACT | 57.259 | 29.630 | 0.00 | 0.00 | 36.94 | 2.66 |
215 | 216 | 9.953565 | AATACAAAACTTATGCTCTTAGTACCA | 57.046 | 29.630 | 0.00 | 0.00 | 0.00 | 3.25 |
216 | 217 | 9.953565 | ATACAAAACTTATGCTCTTAGTACCAA | 57.046 | 29.630 | 0.00 | 0.00 | 0.00 | 3.67 |
217 | 218 | 8.095937 | ACAAAACTTATGCTCTTAGTACCAAC | 57.904 | 34.615 | 0.00 | 0.00 | 0.00 | 3.77 |
218 | 219 | 6.963049 | AAACTTATGCTCTTAGTACCAACG | 57.037 | 37.500 | 0.00 | 0.00 | 0.00 | 4.10 |
219 | 220 | 5.656213 | ACTTATGCTCTTAGTACCAACGT | 57.344 | 39.130 | 0.00 | 0.00 | 0.00 | 3.99 |
220 | 221 | 5.648572 | ACTTATGCTCTTAGTACCAACGTC | 58.351 | 41.667 | 0.00 | 0.00 | 0.00 | 4.34 |
221 | 222 | 2.624316 | TGCTCTTAGTACCAACGTCG | 57.376 | 50.000 | 0.00 | 0.00 | 0.00 | 5.12 |
222 | 223 | 2.153645 | TGCTCTTAGTACCAACGTCGA | 58.846 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
223 | 224 | 2.751259 | TGCTCTTAGTACCAACGTCGAT | 59.249 | 45.455 | 0.00 | 0.00 | 0.00 | 3.59 |
224 | 225 | 3.181503 | TGCTCTTAGTACCAACGTCGATC | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
225 | 226 | 3.791455 | GCTCTTAGTACCAACGTCGATCC | 60.791 | 52.174 | 0.00 | 0.00 | 0.00 | 3.36 |
226 | 227 | 3.614092 | TCTTAGTACCAACGTCGATCCT | 58.386 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
227 | 228 | 4.012374 | TCTTAGTACCAACGTCGATCCTT | 58.988 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
228 | 229 | 2.935481 | AGTACCAACGTCGATCCTTC | 57.065 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
229 | 230 | 2.444421 | AGTACCAACGTCGATCCTTCT | 58.556 | 47.619 | 0.00 | 0.00 | 0.00 | 2.85 |
230 | 231 | 2.824341 | AGTACCAACGTCGATCCTTCTT | 59.176 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
231 | 232 | 2.365408 | ACCAACGTCGATCCTTCTTC | 57.635 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
232 | 233 | 1.269166 | CCAACGTCGATCCTTCTTCG | 58.731 | 55.000 | 0.00 | 0.00 | 37.94 | 3.79 |
233 | 234 | 1.135489 | CCAACGTCGATCCTTCTTCGA | 60.135 | 52.381 | 0.00 | 0.00 | 42.87 | 3.71 |
234 | 235 | 2.177977 | CAACGTCGATCCTTCTTCGAG | 58.822 | 52.381 | 0.00 | 0.00 | 45.41 | 4.04 |
235 | 236 | 3.535691 | CGTCGATCCTTCTTCGAGG | 57.464 | 57.895 | 0.00 | 0.00 | 45.41 | 4.63 |
245 | 246 | 4.072131 | TCCTTCTTCGAGGAAACATTTGG | 58.928 | 43.478 | 11.41 | 7.88 | 42.75 | 3.28 |
246 | 247 | 3.821033 | CCTTCTTCGAGGAAACATTTGGT | 59.179 | 43.478 | 11.41 | 0.00 | 39.25 | 3.67 |
247 | 248 | 4.278419 | CCTTCTTCGAGGAAACATTTGGTT | 59.722 | 41.667 | 11.41 | 0.00 | 42.98 | 3.67 |
248 | 249 | 5.432885 | TTCTTCGAGGAAACATTTGGTTC | 57.567 | 39.130 | 7.61 | 0.00 | 39.29 | 3.62 |
249 | 250 | 4.456535 | TCTTCGAGGAAACATTTGGTTCA | 58.543 | 39.130 | 10.31 | 0.00 | 43.30 | 3.18 |
250 | 251 | 5.070001 | TCTTCGAGGAAACATTTGGTTCAT | 58.930 | 37.500 | 10.31 | 2.88 | 43.30 | 2.57 |
251 | 252 | 6.234920 | TCTTCGAGGAAACATTTGGTTCATA | 58.765 | 36.000 | 10.31 | 0.00 | 43.30 | 2.15 |
252 | 253 | 6.371548 | TCTTCGAGGAAACATTTGGTTCATAG | 59.628 | 38.462 | 10.31 | 4.01 | 43.30 | 2.23 |
253 | 254 | 4.394920 | TCGAGGAAACATTTGGTTCATAGC | 59.605 | 41.667 | 10.31 | 0.00 | 43.30 | 2.97 |
254 | 255 | 4.438744 | CGAGGAAACATTTGGTTCATAGCC | 60.439 | 45.833 | 10.31 | 0.00 | 43.30 | 3.93 |
255 | 256 | 4.415596 | AGGAAACATTTGGTTCATAGCCA | 58.584 | 39.130 | 10.31 | 0.00 | 43.30 | 4.75 |
256 | 257 | 4.837860 | AGGAAACATTTGGTTCATAGCCAA | 59.162 | 37.500 | 10.31 | 0.00 | 43.30 | 4.52 |
257 | 258 | 5.484998 | AGGAAACATTTGGTTCATAGCCAAT | 59.515 | 36.000 | 10.31 | 0.00 | 44.44 | 3.16 |
258 | 259 | 5.812127 | GGAAACATTTGGTTCATAGCCAATC | 59.188 | 40.000 | 10.31 | 0.00 | 44.44 | 2.67 |
259 | 260 | 4.637483 | ACATTTGGTTCATAGCCAATCG | 57.363 | 40.909 | 0.00 | 0.00 | 44.44 | 3.34 |
260 | 261 | 4.016444 | ACATTTGGTTCATAGCCAATCGT | 58.984 | 39.130 | 0.00 | 0.00 | 44.44 | 3.73 |
261 | 262 | 4.142403 | ACATTTGGTTCATAGCCAATCGTG | 60.142 | 41.667 | 0.00 | 0.00 | 44.44 | 4.35 |
262 | 263 | 2.779755 | TGGTTCATAGCCAATCGTGT | 57.220 | 45.000 | 0.00 | 0.00 | 32.29 | 4.49 |
263 | 264 | 2.355197 | TGGTTCATAGCCAATCGTGTG | 58.645 | 47.619 | 0.00 | 0.00 | 32.29 | 3.82 |
264 | 265 | 2.027653 | TGGTTCATAGCCAATCGTGTGA | 60.028 | 45.455 | 0.00 | 0.00 | 32.29 | 3.58 |
265 | 266 | 3.206150 | GGTTCATAGCCAATCGTGTGAT | 58.794 | 45.455 | 0.00 | 0.00 | 35.98 | 3.06 |
266 | 267 | 4.141824 | TGGTTCATAGCCAATCGTGTGATA | 60.142 | 41.667 | 0.00 | 0.00 | 33.40 | 2.15 |
267 | 268 | 4.814234 | GGTTCATAGCCAATCGTGTGATAA | 59.186 | 41.667 | 0.00 | 0.00 | 33.40 | 1.75 |
268 | 269 | 5.295787 | GGTTCATAGCCAATCGTGTGATAAA | 59.704 | 40.000 | 0.00 | 0.00 | 33.40 | 1.40 |
269 | 270 | 6.183360 | GGTTCATAGCCAATCGTGTGATAAAA | 60.183 | 38.462 | 0.00 | 0.00 | 33.40 | 1.52 |
270 | 271 | 7.417612 | GTTCATAGCCAATCGTGTGATAAAAT | 58.582 | 34.615 | 0.00 | 0.00 | 33.40 | 1.82 |
271 | 272 | 7.566760 | TCATAGCCAATCGTGTGATAAAATT | 57.433 | 32.000 | 0.00 | 0.00 | 33.40 | 1.82 |
272 | 273 | 7.416817 | TCATAGCCAATCGTGTGATAAAATTG | 58.583 | 34.615 | 0.00 | 0.00 | 33.40 | 2.32 |
273 | 274 | 4.423732 | AGCCAATCGTGTGATAAAATTGC | 58.576 | 39.130 | 0.00 | 0.00 | 33.40 | 3.56 |
274 | 275 | 4.082300 | AGCCAATCGTGTGATAAAATTGCA | 60.082 | 37.500 | 0.00 | 0.00 | 33.40 | 4.08 |
275 | 276 | 4.031652 | GCCAATCGTGTGATAAAATTGCAC | 59.968 | 41.667 | 0.00 | 0.00 | 33.40 | 4.57 |
276 | 277 | 4.562394 | CCAATCGTGTGATAAAATTGCACC | 59.438 | 41.667 | 0.00 | 0.00 | 33.40 | 5.01 |
277 | 278 | 5.159925 | CAATCGTGTGATAAAATTGCACCA | 58.840 | 37.500 | 0.00 | 0.00 | 33.40 | 4.17 |
278 | 279 | 4.837896 | TCGTGTGATAAAATTGCACCAA | 57.162 | 36.364 | 0.00 | 0.00 | 0.00 | 3.67 |
279 | 280 | 4.541779 | TCGTGTGATAAAATTGCACCAAC | 58.458 | 39.130 | 0.00 | 0.00 | 0.00 | 3.77 |
280 | 281 | 3.360463 | CGTGTGATAAAATTGCACCAACG | 59.640 | 43.478 | 0.00 | 0.00 | 0.00 | 4.10 |
281 | 282 | 4.295051 | GTGTGATAAAATTGCACCAACGT | 58.705 | 39.130 | 0.00 | 0.00 | 0.00 | 3.99 |
282 | 283 | 4.148000 | GTGTGATAAAATTGCACCAACGTG | 59.852 | 41.667 | 0.00 | 0.00 | 43.35 | 4.49 |
283 | 284 | 4.036852 | TGTGATAAAATTGCACCAACGTGA | 59.963 | 37.500 | 0.00 | 0.00 | 43.14 | 4.35 |
284 | 285 | 4.979197 | GTGATAAAATTGCACCAACGTGAA | 59.021 | 37.500 | 0.00 | 0.00 | 43.14 | 3.18 |
285 | 286 | 5.460419 | GTGATAAAATTGCACCAACGTGAAA | 59.540 | 36.000 | 0.00 | 0.00 | 41.94 | 2.69 |
286 | 287 | 5.689514 | TGATAAAATTGCACCAACGTGAAAG | 59.310 | 36.000 | 0.00 | 0.00 | 41.00 | 2.62 |
287 | 288 | 3.791973 | AAATTGCACCAACGTGAAAGA | 57.208 | 38.095 | 0.00 | 0.00 | 41.00 | 2.52 |
288 | 289 | 4.320608 | AAATTGCACCAACGTGAAAGAT | 57.679 | 36.364 | 0.00 | 0.00 | 41.00 | 2.40 |
289 | 290 | 2.772568 | TTGCACCAACGTGAAAGATG | 57.227 | 45.000 | 0.00 | 0.00 | 43.14 | 2.90 |
290 | 291 | 1.960417 | TGCACCAACGTGAAAGATGA | 58.040 | 45.000 | 0.00 | 0.00 | 43.14 | 2.92 |
291 | 292 | 1.601903 | TGCACCAACGTGAAAGATGAC | 59.398 | 47.619 | 0.00 | 0.00 | 43.14 | 3.06 |
292 | 293 | 1.873591 | GCACCAACGTGAAAGATGACT | 59.126 | 47.619 | 0.00 | 0.00 | 43.14 | 3.41 |
293 | 294 | 2.349817 | GCACCAACGTGAAAGATGACTG | 60.350 | 50.000 | 0.00 | 0.00 | 43.14 | 3.51 |
294 | 295 | 1.873591 | ACCAACGTGAAAGATGACTGC | 59.126 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
295 | 296 | 1.136252 | CCAACGTGAAAGATGACTGCG | 60.136 | 52.381 | 0.00 | 0.00 | 0.00 | 5.18 |
296 | 297 | 1.526887 | CAACGTGAAAGATGACTGCGT | 59.473 | 47.619 | 0.00 | 0.00 | 0.00 | 5.24 |
297 | 298 | 1.419374 | ACGTGAAAGATGACTGCGTC | 58.581 | 50.000 | 0.00 | 2.32 | 0.00 | 5.19 |
298 | 299 | 1.000163 | ACGTGAAAGATGACTGCGTCT | 60.000 | 47.619 | 9.49 | 0.00 | 42.12 | 4.18 |
299 | 300 | 1.651138 | CGTGAAAGATGACTGCGTCTC | 59.349 | 52.381 | 9.49 | 5.58 | 39.44 | 3.36 |
300 | 301 | 1.996191 | GTGAAAGATGACTGCGTCTCC | 59.004 | 52.381 | 9.49 | 2.88 | 39.44 | 3.71 |
301 | 302 | 1.618343 | TGAAAGATGACTGCGTCTCCA | 59.382 | 47.619 | 9.49 | 0.00 | 39.44 | 3.86 |
302 | 303 | 2.037121 | TGAAAGATGACTGCGTCTCCAA | 59.963 | 45.455 | 9.49 | 0.00 | 39.44 | 3.53 |
303 | 304 | 2.086054 | AAGATGACTGCGTCTCCAAC | 57.914 | 50.000 | 9.49 | 0.00 | 39.44 | 3.77 |
311 | 312 | 3.725819 | CGTCTCCAACGCAACCAA | 58.274 | 55.556 | 0.00 | 0.00 | 45.76 | 3.67 |
312 | 313 | 1.569493 | CGTCTCCAACGCAACCAAG | 59.431 | 57.895 | 0.00 | 0.00 | 45.76 | 3.61 |
313 | 314 | 1.841663 | CGTCTCCAACGCAACCAAGG | 61.842 | 60.000 | 0.00 | 0.00 | 45.76 | 3.61 |
314 | 315 | 0.818040 | GTCTCCAACGCAACCAAGGT | 60.818 | 55.000 | 0.00 | 0.00 | 0.00 | 3.50 |
315 | 316 | 0.817634 | TCTCCAACGCAACCAAGGTG | 60.818 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
316 | 317 | 0.817634 | CTCCAACGCAACCAAGGTGA | 60.818 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
317 | 318 | 0.394488 | TCCAACGCAACCAAGGTGAA | 60.394 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
318 | 319 | 0.248866 | CCAACGCAACCAAGGTGAAC | 60.249 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
319 | 320 | 0.738389 | CAACGCAACCAAGGTGAACT | 59.262 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
320 | 321 | 0.738389 | AACGCAACCAAGGTGAACTG | 59.262 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
321 | 322 | 0.107410 | ACGCAACCAAGGTGAACTGA | 60.107 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
322 | 323 | 1.238439 | CGCAACCAAGGTGAACTGAT | 58.762 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
323 | 324 | 1.069022 | CGCAACCAAGGTGAACTGATG | 60.069 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
324 | 325 | 2.229792 | GCAACCAAGGTGAACTGATGA | 58.770 | 47.619 | 0.00 | 0.00 | 0.00 | 2.92 |
325 | 326 | 2.622942 | GCAACCAAGGTGAACTGATGAA | 59.377 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
326 | 327 | 3.304928 | GCAACCAAGGTGAACTGATGAAG | 60.305 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
327 | 328 | 3.146104 | ACCAAGGTGAACTGATGAAGG | 57.854 | 47.619 | 0.00 | 0.00 | 0.00 | 3.46 |
328 | 329 | 2.711009 | ACCAAGGTGAACTGATGAAGGA | 59.289 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
329 | 330 | 3.331889 | ACCAAGGTGAACTGATGAAGGAT | 59.668 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
330 | 331 | 4.536090 | ACCAAGGTGAACTGATGAAGGATA | 59.464 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
331 | 332 | 5.192522 | ACCAAGGTGAACTGATGAAGGATAT | 59.807 | 40.000 | 0.00 | 0.00 | 0.00 | 1.63 |
332 | 333 | 5.762218 | CCAAGGTGAACTGATGAAGGATATC | 59.238 | 44.000 | 0.00 | 0.00 | 0.00 | 1.63 |
333 | 334 | 6.351711 | CAAGGTGAACTGATGAAGGATATCA | 58.648 | 40.000 | 4.83 | 0.00 | 33.76 | 2.15 |
334 | 335 | 6.760440 | AGGTGAACTGATGAAGGATATCAT | 57.240 | 37.500 | 4.83 | 0.00 | 42.62 | 2.45 |
343 | 344 | 5.919348 | ATGAAGGATATCATCTTGTGGGT | 57.081 | 39.130 | 4.83 | 0.00 | 35.07 | 4.51 |
345 | 346 | 6.823286 | TGAAGGATATCATCTTGTGGGTAA | 57.177 | 37.500 | 4.83 | 0.00 | 0.00 | 2.85 |
346 | 347 | 6.591935 | TGAAGGATATCATCTTGTGGGTAAC | 58.408 | 40.000 | 4.83 | 0.00 | 0.00 | 2.50 |
347 | 348 | 6.157820 | TGAAGGATATCATCTTGTGGGTAACA | 59.842 | 38.462 | 4.83 | 0.00 | 36.85 | 2.41 |
348 | 349 | 6.575244 | AGGATATCATCTTGTGGGTAACAA | 57.425 | 37.500 | 4.83 | 0.00 | 46.66 | 2.83 |
357 | 358 | 1.953686 | TGTGGGTAACAAGCAAAGAGC | 59.046 | 47.619 | 0.00 | 0.00 | 37.41 | 4.09 |
358 | 359 | 1.953686 | GTGGGTAACAAGCAAAGAGCA | 59.046 | 47.619 | 0.00 | 0.00 | 43.34 | 4.26 |
359 | 360 | 1.953686 | TGGGTAACAAGCAAAGAGCAC | 59.046 | 47.619 | 0.00 | 0.00 | 43.34 | 4.40 |
360 | 361 | 2.230660 | GGGTAACAAGCAAAGAGCACT | 58.769 | 47.619 | 0.00 | 0.00 | 43.34 | 4.40 |
361 | 362 | 2.030805 | GGGTAACAAGCAAAGAGCACTG | 60.031 | 50.000 | 0.00 | 0.00 | 43.34 | 3.66 |
362 | 363 | 4.303805 | GGGTAACAAGCAAAGAGCACTGA | 61.304 | 47.826 | 0.00 | 0.00 | 43.34 | 3.41 |
363 | 364 | 5.581867 | GGGTAACAAGCAAAGAGCACTGAT | 61.582 | 45.833 | 0.00 | 0.00 | 43.34 | 2.90 |
364 | 365 | 7.553170 | GGGTAACAAGCAAAGAGCACTGATG | 62.553 | 48.000 | 0.00 | 0.00 | 43.34 | 3.07 |
499 | 501 | 0.826062 | CCAACGGGTAAGACGGGTAT | 59.174 | 55.000 | 0.00 | 0.00 | 35.23 | 2.73 |
518 | 520 | 3.814504 | ATGGGTATGGGAAGGCAATAG | 57.185 | 47.619 | 0.00 | 0.00 | 0.00 | 1.73 |
543 | 545 | 2.642700 | CGCAAACCCTCAAACCCG | 59.357 | 61.111 | 0.00 | 0.00 | 0.00 | 5.28 |
617 | 620 | 2.130272 | AAAACCCTAAGCTAGCAGCC | 57.870 | 50.000 | 18.83 | 0.00 | 43.77 | 4.85 |
675 | 701 | 1.309499 | CCAATTCTAAACCGCGCCCA | 61.309 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
698 | 724 | 1.203300 | CCCCACCCCTTCCAATTCTTT | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
831 | 878 | 1.386525 | CCAGCCGCCGTAGTTACCTA | 61.387 | 60.000 | 0.00 | 0.00 | 0.00 | 3.08 |
843 | 890 | 5.163258 | CCGTAGTTACCTACTCCTTCTCCTA | 60.163 | 48.000 | 0.00 | 0.00 | 41.24 | 2.94 |
914 | 961 | 4.410400 | CACCACCGGGCCTTCCTC | 62.410 | 72.222 | 6.32 | 0.00 | 37.90 | 3.71 |
1081 | 1135 | 4.838152 | CAGGTCCCGTGGATGGCG | 62.838 | 72.222 | 0.00 | 0.00 | 32.73 | 5.69 |
1102 | 1156 | 1.747355 | TCGACGGGAATAGTTCTCACC | 59.253 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
1115 | 1169 | 1.183030 | TCTCACCGGACGACATGGTT | 61.183 | 55.000 | 9.46 | 0.00 | 32.48 | 3.67 |
1134 | 1188 | 3.128589 | GGTTGTCAAAGTGCACTTCTTCA | 59.871 | 43.478 | 31.20 | 24.13 | 34.61 | 3.02 |
1149 | 1209 | 0.250234 | CTTCATCCTCACGCCTCCAA | 59.750 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1206 | 1272 | 2.813908 | CGCGGTGGCTACAAGGTC | 60.814 | 66.667 | 1.52 | 0.00 | 36.88 | 3.85 |
1237 | 1303 | 2.345991 | GCCGTGGCTCCACTACAA | 59.654 | 61.111 | 16.15 | 0.00 | 44.16 | 2.41 |
1280 | 1346 | 2.125952 | GGCATTTGCTCCGCCAAC | 60.126 | 61.111 | 2.12 | 0.00 | 45.52 | 3.77 |
1284 | 1350 | 0.039617 | CATTTGCTCCGCCAACGAAA | 60.040 | 50.000 | 0.00 | 0.00 | 43.93 | 3.46 |
1286 | 1352 | 0.671251 | TTTGCTCCGCCAACGAAAAT | 59.329 | 45.000 | 0.00 | 0.00 | 43.93 | 1.82 |
1311 | 1377 | 7.278875 | TGGCAAAAATTTGGTGAATAGTTCTT | 58.721 | 30.769 | 7.89 | 0.00 | 38.57 | 2.52 |
1342 | 1409 | 9.995003 | TCACAATGGCACTTTCTTATTTTATTT | 57.005 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
1365 | 1432 | 3.853831 | TGCATGAATGTGTTGATGACC | 57.146 | 42.857 | 0.00 | 0.00 | 31.50 | 4.02 |
1372 | 1439 | 5.351458 | TGAATGTGTTGATGACCGATCTAG | 58.649 | 41.667 | 0.00 | 0.00 | 31.55 | 2.43 |
1374 | 1441 | 4.110036 | TGTGTTGATGACCGATCTAGTG | 57.890 | 45.455 | 0.00 | 0.00 | 31.55 | 2.74 |
1379 | 1446 | 7.148641 | GTGTTGATGACCGATCTAGTGATAAT | 58.851 | 38.462 | 0.00 | 0.00 | 32.19 | 1.28 |
1406 | 1473 | 8.996271 | TGTATATGATGCATGAGTTGATTCTTC | 58.004 | 33.333 | 2.46 | 0.00 | 0.00 | 2.87 |
1451 | 1518 | 6.351711 | AGTCAATATTGAGCATGCTCTTGTA | 58.648 | 36.000 | 39.46 | 29.36 | 43.12 | 2.41 |
1455 | 1522 | 9.511272 | TCAATATTGAGCATGCTCTTGTATATT | 57.489 | 29.630 | 39.46 | 32.62 | 43.12 | 1.28 |
1511 | 1581 | 7.908082 | TCTTGTTAAAACGAGCATATAACATGC | 59.092 | 33.333 | 5.37 | 0.95 | 44.85 | 4.06 |
1573 | 1643 | 5.654317 | TTTTGCATAACACATGCTGTTTG | 57.346 | 34.783 | 15.58 | 13.98 | 40.45 | 2.93 |
1586 | 1656 | 3.472652 | TGCTGTTTGTGTAGTTTCCGAT | 58.527 | 40.909 | 0.00 | 0.00 | 0.00 | 4.18 |
1605 | 1675 | 6.851609 | TCCGATTAGATGATTTGTTTTGTGG | 58.148 | 36.000 | 0.00 | 0.00 | 0.00 | 4.17 |
1606 | 1676 | 5.516339 | CCGATTAGATGATTTGTTTTGTGGC | 59.484 | 40.000 | 0.00 | 0.00 | 0.00 | 5.01 |
1609 | 1679 | 7.253850 | CGATTAGATGATTTGTTTTGTGGCATG | 60.254 | 37.037 | 0.00 | 0.00 | 0.00 | 4.06 |
1633 | 1703 | 7.950512 | TGTACAAGTTTCCAATTCATTGATGT | 58.049 | 30.769 | 0.00 | 0.00 | 40.14 | 3.06 |
1742 | 1827 | 7.393234 | ACAATTTATGTTTCCGATGGAGAAGAA | 59.607 | 33.333 | 0.00 | 0.00 | 40.06 | 2.52 |
1752 | 1837 | 3.493873 | CGATGGAGAAGAAGATGATGCCA | 60.494 | 47.826 | 0.00 | 0.00 | 0.00 | 4.92 |
1818 | 1906 | 3.006859 | GGTTTGGTTGGAAATGGAGAAGG | 59.993 | 47.826 | 0.00 | 0.00 | 0.00 | 3.46 |
1888 | 1976 | 0.743688 | CTCACCACAGGATCGAGGAG | 59.256 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1950 | 2038 | 5.163612 | ACTCAAAAGAAGTTGAAGACCAAGC | 60.164 | 40.000 | 0.00 | 0.00 | 37.08 | 4.01 |
2025 | 2113 | 0.743688 | AGTGAGCATGGAGAGCTACG | 59.256 | 55.000 | 0.00 | 0.00 | 43.58 | 3.51 |
2072 | 2160 | 1.541588 | GAGCTTGGGAACATGTTGGTC | 59.458 | 52.381 | 17.58 | 12.16 | 42.32 | 4.02 |
2075 | 2163 | 2.365293 | GCTTGGGAACATGTTGGTCTTT | 59.635 | 45.455 | 17.58 | 0.00 | 42.32 | 2.52 |
2077 | 2165 | 2.226330 | TGGGAACATGTTGGTCTTTCG | 58.774 | 47.619 | 17.58 | 0.00 | 33.75 | 3.46 |
2131 | 2219 | 4.280677 | TGGTTTTAGGAGATTTGTTGCTGG | 59.719 | 41.667 | 0.00 | 0.00 | 0.00 | 4.85 |
2272 | 2401 | 8.735315 | TCTTTTGTTTTGTAGAACTGACATTGA | 58.265 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2471 | 2604 | 3.622612 | TGCATTCTCATGTACATGTTCGG | 59.377 | 43.478 | 30.03 | 19.60 | 39.72 | 4.30 |
2472 | 2605 | 3.546815 | GCATTCTCATGTACATGTTCGGC | 60.547 | 47.826 | 30.03 | 23.49 | 39.72 | 5.54 |
2581 | 2741 | 5.362430 | CAGAAGTTATAGCTGAGAACCTCCT | 59.638 | 44.000 | 0.00 | 0.00 | 28.85 | 3.69 |
2595 | 2755 | 0.679505 | CCTCCTTGAGTCGTTGGTCA | 59.320 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2629 | 2789 | 3.126001 | TGAAAAGCTCTTGACCGTGAT | 57.874 | 42.857 | 0.00 | 0.00 | 0.00 | 3.06 |
2847 | 3010 | 3.682999 | GCCTCACCCAAAAGGATAGAGAC | 60.683 | 52.174 | 0.00 | 0.00 | 39.89 | 3.36 |
2863 | 3026 | 4.000331 | AGAGACATTTGAGGATATGGCG | 58.000 | 45.455 | 0.00 | 0.00 | 34.90 | 5.69 |
2872 | 3035 | 7.387948 | ACATTTGAGGATATGGCGAAGTATAAC | 59.612 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
3019 | 3183 | 5.223382 | CAATATGAGTGGCTACCTAGTTCG | 58.777 | 45.833 | 0.00 | 0.00 | 0.00 | 3.95 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
31 | 32 | 9.082313 | CCCTCCATTTTTATTTACTCTGCATAT | 57.918 | 33.333 | 0.00 | 0.00 | 0.00 | 1.78 |
32 | 33 | 7.014230 | GCCCTCCATTTTTATTTACTCTGCATA | 59.986 | 37.037 | 0.00 | 0.00 | 0.00 | 3.14 |
33 | 34 | 6.183360 | GCCCTCCATTTTTATTTACTCTGCAT | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 3.96 |
34 | 35 | 5.127031 | GCCCTCCATTTTTATTTACTCTGCA | 59.873 | 40.000 | 0.00 | 0.00 | 0.00 | 4.41 |
35 | 36 | 5.360999 | AGCCCTCCATTTTTATTTACTCTGC | 59.639 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
36 | 37 | 7.775561 | AGTAGCCCTCCATTTTTATTTACTCTG | 59.224 | 37.037 | 0.00 | 0.00 | 0.00 | 3.35 |
37 | 38 | 7.873195 | AGTAGCCCTCCATTTTTATTTACTCT | 58.127 | 34.615 | 0.00 | 0.00 | 0.00 | 3.24 |
38 | 39 | 9.053840 | GTAGTAGCCCTCCATTTTTATTTACTC | 57.946 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
39 | 40 | 7.713942 | CGTAGTAGCCCTCCATTTTTATTTACT | 59.286 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
40 | 41 | 7.496920 | ACGTAGTAGCCCTCCATTTTTATTTAC | 59.503 | 37.037 | 0.00 | 0.00 | 41.94 | 2.01 |
41 | 42 | 7.567458 | ACGTAGTAGCCCTCCATTTTTATTTA | 58.433 | 34.615 | 0.00 | 0.00 | 41.94 | 1.40 |
42 | 43 | 6.420638 | ACGTAGTAGCCCTCCATTTTTATTT | 58.579 | 36.000 | 0.00 | 0.00 | 41.94 | 1.40 |
43 | 44 | 5.997843 | ACGTAGTAGCCCTCCATTTTTATT | 58.002 | 37.500 | 0.00 | 0.00 | 41.94 | 1.40 |
44 | 45 | 5.625568 | ACGTAGTAGCCCTCCATTTTTAT | 57.374 | 39.130 | 0.00 | 0.00 | 41.94 | 1.40 |
45 | 46 | 5.046448 | TGAACGTAGTAGCCCTCCATTTTTA | 60.046 | 40.000 | 0.00 | 0.00 | 45.00 | 1.52 |
46 | 47 | 3.994931 | ACGTAGTAGCCCTCCATTTTT | 57.005 | 42.857 | 0.00 | 0.00 | 41.94 | 1.94 |
47 | 48 | 3.262405 | TGAACGTAGTAGCCCTCCATTTT | 59.738 | 43.478 | 0.00 | 0.00 | 45.00 | 1.82 |
48 | 49 | 2.835764 | TGAACGTAGTAGCCCTCCATTT | 59.164 | 45.455 | 0.00 | 0.00 | 45.00 | 2.32 |
49 | 50 | 2.463752 | TGAACGTAGTAGCCCTCCATT | 58.536 | 47.619 | 0.00 | 0.00 | 45.00 | 3.16 |
50 | 51 | 2.154567 | TGAACGTAGTAGCCCTCCAT | 57.845 | 50.000 | 0.00 | 0.00 | 45.00 | 3.41 |
51 | 52 | 2.029623 | GATGAACGTAGTAGCCCTCCA | 58.970 | 52.381 | 0.00 | 0.00 | 45.00 | 3.86 |
52 | 53 | 1.340568 | GGATGAACGTAGTAGCCCTCC | 59.659 | 57.143 | 0.00 | 0.00 | 45.00 | 4.30 |
53 | 54 | 1.001597 | CGGATGAACGTAGTAGCCCTC | 60.002 | 57.143 | 0.00 | 0.00 | 45.00 | 4.30 |
54 | 55 | 1.030457 | CGGATGAACGTAGTAGCCCT | 58.970 | 55.000 | 0.00 | 0.00 | 45.00 | 5.19 |
55 | 56 | 0.031721 | CCGGATGAACGTAGTAGCCC | 59.968 | 60.000 | 0.00 | 0.00 | 45.00 | 5.19 |
56 | 57 | 0.031721 | CCCGGATGAACGTAGTAGCC | 59.968 | 60.000 | 0.73 | 0.00 | 45.00 | 3.93 |
57 | 58 | 0.743097 | ACCCGGATGAACGTAGTAGC | 59.257 | 55.000 | 0.73 | 0.00 | 45.00 | 3.58 |
58 | 59 | 3.515330 | AAACCCGGATGAACGTAGTAG | 57.485 | 47.619 | 0.73 | 0.00 | 45.00 | 2.57 |
59 | 60 | 3.959535 | AAAACCCGGATGAACGTAGTA | 57.040 | 42.857 | 0.73 | 0.00 | 45.00 | 1.82 |
61 | 62 | 4.248058 | ACTAAAAACCCGGATGAACGTAG | 58.752 | 43.478 | 0.73 | 0.00 | 0.00 | 3.51 |
62 | 63 | 4.244862 | GACTAAAAACCCGGATGAACGTA | 58.755 | 43.478 | 0.73 | 0.00 | 0.00 | 3.57 |
63 | 64 | 3.069289 | GACTAAAAACCCGGATGAACGT | 58.931 | 45.455 | 0.73 | 0.00 | 0.00 | 3.99 |
64 | 65 | 2.417586 | GGACTAAAAACCCGGATGAACG | 59.582 | 50.000 | 0.73 | 0.00 | 0.00 | 3.95 |
65 | 66 | 3.189910 | GTGGACTAAAAACCCGGATGAAC | 59.810 | 47.826 | 0.73 | 0.00 | 0.00 | 3.18 |
66 | 67 | 3.181442 | TGTGGACTAAAAACCCGGATGAA | 60.181 | 43.478 | 0.73 | 0.00 | 0.00 | 2.57 |
67 | 68 | 2.372504 | TGTGGACTAAAAACCCGGATGA | 59.627 | 45.455 | 0.73 | 0.00 | 0.00 | 2.92 |
68 | 69 | 2.486592 | GTGTGGACTAAAAACCCGGATG | 59.513 | 50.000 | 0.73 | 0.00 | 0.00 | 3.51 |
69 | 70 | 2.553685 | GGTGTGGACTAAAAACCCGGAT | 60.554 | 50.000 | 0.73 | 0.00 | 0.00 | 4.18 |
70 | 71 | 1.202794 | GGTGTGGACTAAAAACCCGGA | 60.203 | 52.381 | 0.73 | 0.00 | 0.00 | 5.14 |
71 | 72 | 1.241165 | GGTGTGGACTAAAAACCCGG | 58.759 | 55.000 | 0.00 | 0.00 | 0.00 | 5.73 |
72 | 73 | 1.970092 | TGGTGTGGACTAAAAACCCG | 58.030 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
73 | 74 | 4.948341 | AAATGGTGTGGACTAAAAACCC | 57.052 | 40.909 | 0.00 | 0.00 | 0.00 | 4.11 |
99 | 100 | 9.520515 | AACTAAATATGTGGTCAGACTTTGATT | 57.479 | 29.630 | 0.00 | 0.00 | 38.29 | 2.57 |
105 | 106 | 9.765795 | GCTATTAACTAAATATGTGGTCAGACT | 57.234 | 33.333 | 0.00 | 0.00 | 29.63 | 3.24 |
106 | 107 | 8.989980 | GGCTATTAACTAAATATGTGGTCAGAC | 58.010 | 37.037 | 0.00 | 0.00 | 29.63 | 3.51 |
107 | 108 | 7.870954 | CGGCTATTAACTAAATATGTGGTCAGA | 59.129 | 37.037 | 0.00 | 0.00 | 29.63 | 3.27 |
108 | 109 | 7.117812 | CCGGCTATTAACTAAATATGTGGTCAG | 59.882 | 40.741 | 0.00 | 0.00 | 29.63 | 3.51 |
109 | 110 | 6.932400 | CCGGCTATTAACTAAATATGTGGTCA | 59.068 | 38.462 | 0.00 | 0.00 | 29.63 | 4.02 |
110 | 111 | 7.117379 | GTCCGGCTATTAACTAAATATGTGGTC | 59.883 | 40.741 | 0.00 | 0.00 | 29.63 | 4.02 |
111 | 112 | 6.932960 | GTCCGGCTATTAACTAAATATGTGGT | 59.067 | 38.462 | 0.00 | 0.00 | 29.63 | 4.16 |
112 | 113 | 6.932400 | TGTCCGGCTATTAACTAAATATGTGG | 59.068 | 38.462 | 0.00 | 0.00 | 29.63 | 4.17 |
113 | 114 | 7.956420 | TGTCCGGCTATTAACTAAATATGTG | 57.044 | 36.000 | 0.00 | 0.00 | 29.63 | 3.21 |
114 | 115 | 8.967664 | TTTGTCCGGCTATTAACTAAATATGT | 57.032 | 30.769 | 0.00 | 0.00 | 29.63 | 2.29 |
125 | 126 | 8.842280 | CCTGTAATTTTATTTGTCCGGCTATTA | 58.158 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
126 | 127 | 7.201875 | CCCTGTAATTTTATTTGTCCGGCTATT | 60.202 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
127 | 128 | 6.264518 | CCCTGTAATTTTATTTGTCCGGCTAT | 59.735 | 38.462 | 0.00 | 0.00 | 0.00 | 2.97 |
128 | 129 | 5.591067 | CCCTGTAATTTTATTTGTCCGGCTA | 59.409 | 40.000 | 0.00 | 0.00 | 0.00 | 3.93 |
129 | 130 | 4.401202 | CCCTGTAATTTTATTTGTCCGGCT | 59.599 | 41.667 | 0.00 | 0.00 | 0.00 | 5.52 |
130 | 131 | 4.440940 | CCCCTGTAATTTTATTTGTCCGGC | 60.441 | 45.833 | 0.00 | 0.00 | 0.00 | 6.13 |
131 | 132 | 4.951094 | TCCCCTGTAATTTTATTTGTCCGG | 59.049 | 41.667 | 0.00 | 0.00 | 0.00 | 5.14 |
132 | 133 | 5.449999 | GCTCCCCTGTAATTTTATTTGTCCG | 60.450 | 44.000 | 0.00 | 0.00 | 0.00 | 4.79 |
133 | 134 | 5.656859 | AGCTCCCCTGTAATTTTATTTGTCC | 59.343 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
134 | 135 | 6.377146 | TCAGCTCCCCTGTAATTTTATTTGTC | 59.623 | 38.462 | 0.00 | 0.00 | 42.38 | 3.18 |
135 | 136 | 6.252995 | TCAGCTCCCCTGTAATTTTATTTGT | 58.747 | 36.000 | 0.00 | 0.00 | 42.38 | 2.83 |
136 | 137 | 6.773976 | TCAGCTCCCCTGTAATTTTATTTG | 57.226 | 37.500 | 0.00 | 0.00 | 42.38 | 2.32 |
137 | 138 | 7.122799 | GTCTTCAGCTCCCCTGTAATTTTATTT | 59.877 | 37.037 | 0.00 | 0.00 | 42.38 | 1.40 |
138 | 139 | 6.603599 | GTCTTCAGCTCCCCTGTAATTTTATT | 59.396 | 38.462 | 0.00 | 0.00 | 42.38 | 1.40 |
139 | 140 | 6.122964 | GTCTTCAGCTCCCCTGTAATTTTAT | 58.877 | 40.000 | 0.00 | 0.00 | 42.38 | 1.40 |
140 | 141 | 5.013704 | TGTCTTCAGCTCCCCTGTAATTTTA | 59.986 | 40.000 | 0.00 | 0.00 | 42.38 | 1.52 |
141 | 142 | 4.202567 | TGTCTTCAGCTCCCCTGTAATTTT | 60.203 | 41.667 | 0.00 | 0.00 | 42.38 | 1.82 |
142 | 143 | 3.330701 | TGTCTTCAGCTCCCCTGTAATTT | 59.669 | 43.478 | 0.00 | 0.00 | 42.38 | 1.82 |
143 | 144 | 2.912956 | TGTCTTCAGCTCCCCTGTAATT | 59.087 | 45.455 | 0.00 | 0.00 | 42.38 | 1.40 |
144 | 145 | 2.551270 | TGTCTTCAGCTCCCCTGTAAT | 58.449 | 47.619 | 0.00 | 0.00 | 42.38 | 1.89 |
145 | 146 | 2.024176 | TGTCTTCAGCTCCCCTGTAA | 57.976 | 50.000 | 0.00 | 0.00 | 42.38 | 2.41 |
146 | 147 | 2.024176 | TTGTCTTCAGCTCCCCTGTA | 57.976 | 50.000 | 0.00 | 0.00 | 42.38 | 2.74 |
147 | 148 | 1.072965 | CTTTGTCTTCAGCTCCCCTGT | 59.927 | 52.381 | 0.00 | 0.00 | 42.38 | 4.00 |
148 | 149 | 1.072965 | ACTTTGTCTTCAGCTCCCCTG | 59.927 | 52.381 | 0.00 | 0.00 | 43.17 | 4.45 |
149 | 150 | 1.439543 | ACTTTGTCTTCAGCTCCCCT | 58.560 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
150 | 151 | 1.882623 | CAACTTTGTCTTCAGCTCCCC | 59.117 | 52.381 | 0.00 | 0.00 | 0.00 | 4.81 |
151 | 152 | 2.291741 | CACAACTTTGTCTTCAGCTCCC | 59.708 | 50.000 | 0.00 | 0.00 | 39.91 | 4.30 |
152 | 153 | 3.206150 | TCACAACTTTGTCTTCAGCTCC | 58.794 | 45.455 | 0.00 | 0.00 | 39.91 | 4.70 |
153 | 154 | 4.122776 | TCTCACAACTTTGTCTTCAGCTC | 58.877 | 43.478 | 0.00 | 0.00 | 39.91 | 4.09 |
154 | 155 | 4.142609 | TCTCACAACTTTGTCTTCAGCT | 57.857 | 40.909 | 0.00 | 0.00 | 39.91 | 4.24 |
155 | 156 | 4.260948 | CCTTCTCACAACTTTGTCTTCAGC | 60.261 | 45.833 | 0.00 | 0.00 | 39.91 | 4.26 |
156 | 157 | 4.260948 | GCCTTCTCACAACTTTGTCTTCAG | 60.261 | 45.833 | 0.00 | 0.00 | 39.91 | 3.02 |
157 | 158 | 3.627577 | GCCTTCTCACAACTTTGTCTTCA | 59.372 | 43.478 | 0.00 | 0.00 | 39.91 | 3.02 |
158 | 159 | 3.879892 | AGCCTTCTCACAACTTTGTCTTC | 59.120 | 43.478 | 0.00 | 0.00 | 39.91 | 2.87 |
159 | 160 | 3.891049 | AGCCTTCTCACAACTTTGTCTT | 58.109 | 40.909 | 0.00 | 0.00 | 39.91 | 3.01 |
160 | 161 | 3.567478 | AGCCTTCTCACAACTTTGTCT | 57.433 | 42.857 | 0.00 | 0.00 | 39.91 | 3.41 |
161 | 162 | 4.816925 | ACTAAGCCTTCTCACAACTTTGTC | 59.183 | 41.667 | 0.00 | 0.00 | 39.91 | 3.18 |
162 | 163 | 4.781934 | ACTAAGCCTTCTCACAACTTTGT | 58.218 | 39.130 | 0.00 | 0.00 | 43.36 | 2.83 |
163 | 164 | 6.861065 | TTACTAAGCCTTCTCACAACTTTG | 57.139 | 37.500 | 0.00 | 0.00 | 0.00 | 2.77 |
164 | 165 | 7.224297 | TGATTACTAAGCCTTCTCACAACTTT | 58.776 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
165 | 166 | 6.769512 | TGATTACTAAGCCTTCTCACAACTT | 58.230 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
166 | 167 | 6.360370 | TGATTACTAAGCCTTCTCACAACT | 57.640 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
167 | 168 | 7.617041 | ATTGATTACTAAGCCTTCTCACAAC | 57.383 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
168 | 169 | 8.318412 | TGTATTGATTACTAAGCCTTCTCACAA | 58.682 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
169 | 170 | 7.847096 | TGTATTGATTACTAAGCCTTCTCACA | 58.153 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
170 | 171 | 8.718102 | TTGTATTGATTACTAAGCCTTCTCAC | 57.282 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
171 | 172 | 9.733556 | TTTTGTATTGATTACTAAGCCTTCTCA | 57.266 | 29.630 | 0.00 | 0.00 | 29.32 | 3.27 |
172 | 173 | 9.989869 | GTTTTGTATTGATTACTAAGCCTTCTC | 57.010 | 33.333 | 0.00 | 0.00 | 29.32 | 2.87 |
173 | 174 | 9.740710 | AGTTTTGTATTGATTACTAAGCCTTCT | 57.259 | 29.630 | 0.00 | 0.00 | 30.81 | 2.85 |
189 | 190 | 9.953565 | TGGTACTAAGAGCATAAGTTTTGTATT | 57.046 | 29.630 | 0.00 | 0.00 | 0.00 | 1.89 |
190 | 191 | 9.953565 | TTGGTACTAAGAGCATAAGTTTTGTAT | 57.046 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
191 | 192 | 9.211485 | GTTGGTACTAAGAGCATAAGTTTTGTA | 57.789 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
192 | 193 | 7.095355 | CGTTGGTACTAAGAGCATAAGTTTTGT | 60.095 | 37.037 | 0.00 | 0.00 | 0.00 | 2.83 |
193 | 194 | 7.095355 | ACGTTGGTACTAAGAGCATAAGTTTTG | 60.095 | 37.037 | 0.00 | 0.00 | 0.00 | 2.44 |
194 | 195 | 6.932960 | ACGTTGGTACTAAGAGCATAAGTTTT | 59.067 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
195 | 196 | 6.461640 | ACGTTGGTACTAAGAGCATAAGTTT | 58.538 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
196 | 197 | 6.034161 | ACGTTGGTACTAAGAGCATAAGTT | 57.966 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
197 | 198 | 5.648572 | GACGTTGGTACTAAGAGCATAAGT | 58.351 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
198 | 199 | 4.733887 | CGACGTTGGTACTAAGAGCATAAG | 59.266 | 45.833 | 0.00 | 0.00 | 0.00 | 1.73 |
199 | 200 | 4.395854 | TCGACGTTGGTACTAAGAGCATAA | 59.604 | 41.667 | 2.20 | 0.00 | 0.00 | 1.90 |
200 | 201 | 3.940852 | TCGACGTTGGTACTAAGAGCATA | 59.059 | 43.478 | 2.20 | 0.00 | 0.00 | 3.14 |
201 | 202 | 2.751259 | TCGACGTTGGTACTAAGAGCAT | 59.249 | 45.455 | 2.20 | 0.00 | 0.00 | 3.79 |
202 | 203 | 2.153645 | TCGACGTTGGTACTAAGAGCA | 58.846 | 47.619 | 2.20 | 0.00 | 0.00 | 4.26 |
203 | 204 | 2.907910 | TCGACGTTGGTACTAAGAGC | 57.092 | 50.000 | 2.20 | 0.00 | 0.00 | 4.09 |
204 | 205 | 3.626670 | AGGATCGACGTTGGTACTAAGAG | 59.373 | 47.826 | 0.00 | 0.00 | 0.00 | 2.85 |
205 | 206 | 3.614092 | AGGATCGACGTTGGTACTAAGA | 58.386 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
206 | 207 | 4.096081 | AGAAGGATCGACGTTGGTACTAAG | 59.904 | 45.833 | 0.00 | 0.00 | 0.00 | 2.18 |
207 | 208 | 4.012374 | AGAAGGATCGACGTTGGTACTAA | 58.988 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
208 | 209 | 3.614092 | AGAAGGATCGACGTTGGTACTA | 58.386 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
209 | 210 | 2.444421 | AGAAGGATCGACGTTGGTACT | 58.556 | 47.619 | 0.00 | 0.00 | 0.00 | 2.73 |
210 | 211 | 2.935481 | AGAAGGATCGACGTTGGTAC | 57.065 | 50.000 | 2.20 | 0.00 | 0.00 | 3.34 |
211 | 212 | 2.159476 | CGAAGAAGGATCGACGTTGGTA | 60.159 | 50.000 | 2.20 | 0.00 | 42.76 | 3.25 |
212 | 213 | 1.402456 | CGAAGAAGGATCGACGTTGGT | 60.402 | 52.381 | 2.20 | 0.00 | 42.76 | 3.67 |
213 | 214 | 1.135489 | TCGAAGAAGGATCGACGTTGG | 60.135 | 52.381 | 2.20 | 0.00 | 43.76 | 3.77 |
214 | 215 | 2.177977 | CTCGAAGAAGGATCGACGTTG | 58.822 | 52.381 | 0.00 | 0.00 | 43.76 | 4.10 |
215 | 216 | 1.132643 | CCTCGAAGAAGGATCGACGTT | 59.867 | 52.381 | 0.00 | 0.00 | 43.76 | 3.99 |
216 | 217 | 0.733729 | CCTCGAAGAAGGATCGACGT | 59.266 | 55.000 | 0.00 | 0.00 | 43.76 | 4.34 |
217 | 218 | 1.015109 | TCCTCGAAGAAGGATCGACG | 58.985 | 55.000 | 0.00 | 0.00 | 43.76 | 5.12 |
218 | 219 | 3.180613 | GTTTCCTCGAAGAAGGATCGAC | 58.819 | 50.000 | 0.00 | 0.00 | 43.76 | 4.20 |
219 | 220 | 2.823747 | TGTTTCCTCGAAGAAGGATCGA | 59.176 | 45.455 | 0.00 | 0.00 | 46.18 | 3.59 |
220 | 221 | 3.232213 | TGTTTCCTCGAAGAAGGATCG | 57.768 | 47.619 | 0.00 | 0.00 | 41.53 | 3.69 |
221 | 222 | 5.163713 | CCAAATGTTTCCTCGAAGAAGGATC | 60.164 | 44.000 | 0.00 | 0.00 | 34.73 | 3.36 |
222 | 223 | 4.702131 | CCAAATGTTTCCTCGAAGAAGGAT | 59.298 | 41.667 | 0.00 | 0.00 | 34.73 | 3.24 |
223 | 224 | 4.072131 | CCAAATGTTTCCTCGAAGAAGGA | 58.928 | 43.478 | 0.00 | 0.00 | 34.09 | 3.36 |
224 | 225 | 3.821033 | ACCAAATGTTTCCTCGAAGAAGG | 59.179 | 43.478 | 0.00 | 0.00 | 34.09 | 3.46 |
225 | 226 | 5.008613 | TGAACCAAATGTTTCCTCGAAGAAG | 59.991 | 40.000 | 0.00 | 0.00 | 37.29 | 2.85 |
226 | 227 | 4.884744 | TGAACCAAATGTTTCCTCGAAGAA | 59.115 | 37.500 | 0.00 | 0.00 | 37.29 | 2.52 |
227 | 228 | 4.456535 | TGAACCAAATGTTTCCTCGAAGA | 58.543 | 39.130 | 0.00 | 0.00 | 37.29 | 2.87 |
228 | 229 | 4.829064 | TGAACCAAATGTTTCCTCGAAG | 57.171 | 40.909 | 0.00 | 0.00 | 37.29 | 3.79 |
229 | 230 | 5.106317 | GCTATGAACCAAATGTTTCCTCGAA | 60.106 | 40.000 | 0.00 | 0.00 | 37.29 | 3.71 |
230 | 231 | 4.394920 | GCTATGAACCAAATGTTTCCTCGA | 59.605 | 41.667 | 0.00 | 0.00 | 37.29 | 4.04 |
231 | 232 | 4.438744 | GGCTATGAACCAAATGTTTCCTCG | 60.439 | 45.833 | 0.00 | 0.00 | 37.29 | 4.63 |
232 | 233 | 4.462483 | TGGCTATGAACCAAATGTTTCCTC | 59.538 | 41.667 | 0.00 | 0.00 | 37.29 | 3.71 |
233 | 234 | 4.415596 | TGGCTATGAACCAAATGTTTCCT | 58.584 | 39.130 | 0.00 | 0.00 | 37.29 | 3.36 |
234 | 235 | 4.799564 | TGGCTATGAACCAAATGTTTCC | 57.200 | 40.909 | 0.00 | 0.00 | 37.29 | 3.13 |
243 | 244 | 2.027653 | TCACACGATTGGCTATGAACCA | 60.028 | 45.455 | 0.00 | 0.00 | 34.65 | 3.67 |
244 | 245 | 2.627945 | TCACACGATTGGCTATGAACC | 58.372 | 47.619 | 0.00 | 0.00 | 0.00 | 3.62 |
245 | 246 | 5.984233 | TTATCACACGATTGGCTATGAAC | 57.016 | 39.130 | 0.00 | 0.00 | 32.73 | 3.18 |
246 | 247 | 6.993786 | TTTTATCACACGATTGGCTATGAA | 57.006 | 33.333 | 0.00 | 0.00 | 32.73 | 2.57 |
247 | 248 | 7.416817 | CAATTTTATCACACGATTGGCTATGA | 58.583 | 34.615 | 0.00 | 0.00 | 32.73 | 2.15 |
248 | 249 | 6.142798 | GCAATTTTATCACACGATTGGCTATG | 59.857 | 38.462 | 0.00 | 0.00 | 32.73 | 2.23 |
249 | 250 | 6.183360 | TGCAATTTTATCACACGATTGGCTAT | 60.183 | 34.615 | 0.00 | 0.00 | 32.73 | 2.97 |
250 | 251 | 5.124617 | TGCAATTTTATCACACGATTGGCTA | 59.875 | 36.000 | 0.00 | 0.00 | 32.73 | 3.93 |
251 | 252 | 4.082300 | TGCAATTTTATCACACGATTGGCT | 60.082 | 37.500 | 0.00 | 0.00 | 32.73 | 4.75 |
252 | 253 | 4.031652 | GTGCAATTTTATCACACGATTGGC | 59.968 | 41.667 | 0.00 | 0.00 | 32.73 | 4.52 |
253 | 254 | 4.562394 | GGTGCAATTTTATCACACGATTGG | 59.438 | 41.667 | 0.00 | 0.00 | 32.73 | 3.16 |
254 | 255 | 5.159925 | TGGTGCAATTTTATCACACGATTG | 58.840 | 37.500 | 0.00 | 0.00 | 32.73 | 2.67 |
255 | 256 | 5.384063 | TGGTGCAATTTTATCACACGATT | 57.616 | 34.783 | 0.00 | 0.00 | 32.73 | 3.34 |
256 | 257 | 5.160641 | GTTGGTGCAATTTTATCACACGAT | 58.839 | 37.500 | 0.00 | 0.00 | 35.50 | 3.73 |
257 | 258 | 4.541779 | GTTGGTGCAATTTTATCACACGA | 58.458 | 39.130 | 0.00 | 0.00 | 32.69 | 4.35 |
258 | 259 | 3.360463 | CGTTGGTGCAATTTTATCACACG | 59.640 | 43.478 | 0.00 | 0.00 | 32.69 | 4.49 |
259 | 260 | 4.148000 | CACGTTGGTGCAATTTTATCACAC | 59.852 | 41.667 | 0.00 | 0.00 | 37.35 | 3.82 |
260 | 261 | 4.036852 | TCACGTTGGTGCAATTTTATCACA | 59.963 | 37.500 | 0.00 | 0.00 | 44.03 | 3.58 |
261 | 262 | 4.541779 | TCACGTTGGTGCAATTTTATCAC | 58.458 | 39.130 | 0.00 | 0.00 | 44.03 | 3.06 |
262 | 263 | 4.837896 | TCACGTTGGTGCAATTTTATCA | 57.162 | 36.364 | 0.00 | 0.00 | 44.03 | 2.15 |
263 | 264 | 5.918011 | TCTTTCACGTTGGTGCAATTTTATC | 59.082 | 36.000 | 0.00 | 0.00 | 44.03 | 1.75 |
264 | 265 | 5.837437 | TCTTTCACGTTGGTGCAATTTTAT | 58.163 | 33.333 | 0.00 | 0.00 | 44.03 | 1.40 |
265 | 266 | 5.250235 | TCTTTCACGTTGGTGCAATTTTA | 57.750 | 34.783 | 0.00 | 0.00 | 44.03 | 1.52 |
266 | 267 | 4.116747 | TCTTTCACGTTGGTGCAATTTT | 57.883 | 36.364 | 0.00 | 0.00 | 44.03 | 1.82 |
267 | 268 | 3.791973 | TCTTTCACGTTGGTGCAATTT | 57.208 | 38.095 | 0.00 | 0.00 | 44.03 | 1.82 |
268 | 269 | 3.317711 | TCATCTTTCACGTTGGTGCAATT | 59.682 | 39.130 | 0.00 | 0.00 | 44.03 | 2.32 |
269 | 270 | 2.884012 | TCATCTTTCACGTTGGTGCAAT | 59.116 | 40.909 | 0.00 | 0.00 | 44.03 | 3.56 |
270 | 271 | 2.032799 | GTCATCTTTCACGTTGGTGCAA | 59.967 | 45.455 | 0.00 | 0.00 | 44.03 | 4.08 |
271 | 272 | 1.601903 | GTCATCTTTCACGTTGGTGCA | 59.398 | 47.619 | 0.00 | 0.00 | 44.03 | 4.57 |
272 | 273 | 1.873591 | AGTCATCTTTCACGTTGGTGC | 59.126 | 47.619 | 0.00 | 0.00 | 44.03 | 5.01 |
273 | 274 | 2.349817 | GCAGTCATCTTTCACGTTGGTG | 60.350 | 50.000 | 0.00 | 0.00 | 45.78 | 4.17 |
274 | 275 | 1.873591 | GCAGTCATCTTTCACGTTGGT | 59.126 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
275 | 276 | 1.136252 | CGCAGTCATCTTTCACGTTGG | 60.136 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
276 | 277 | 1.526887 | ACGCAGTCATCTTTCACGTTG | 59.473 | 47.619 | 0.00 | 0.00 | 29.74 | 4.10 |
277 | 278 | 1.865865 | ACGCAGTCATCTTTCACGTT | 58.134 | 45.000 | 0.00 | 0.00 | 29.74 | 3.99 |
278 | 279 | 3.588277 | ACGCAGTCATCTTTCACGT | 57.412 | 47.368 | 0.00 | 0.00 | 29.74 | 4.49 |
295 | 296 | 0.818040 | ACCTTGGTTGCGTTGGAGAC | 60.818 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
296 | 297 | 0.817634 | CACCTTGGTTGCGTTGGAGA | 60.818 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
297 | 298 | 0.817634 | TCACCTTGGTTGCGTTGGAG | 60.818 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
298 | 299 | 0.394488 | TTCACCTTGGTTGCGTTGGA | 60.394 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
299 | 300 | 0.248866 | GTTCACCTTGGTTGCGTTGG | 60.249 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
300 | 301 | 0.738389 | AGTTCACCTTGGTTGCGTTG | 59.262 | 50.000 | 0.00 | 0.00 | 0.00 | 4.10 |
301 | 302 | 0.738389 | CAGTTCACCTTGGTTGCGTT | 59.262 | 50.000 | 0.00 | 0.00 | 0.00 | 4.84 |
302 | 303 | 0.107410 | TCAGTTCACCTTGGTTGCGT | 60.107 | 50.000 | 0.00 | 0.00 | 0.00 | 5.24 |
303 | 304 | 1.069022 | CATCAGTTCACCTTGGTTGCG | 60.069 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
304 | 305 | 2.229792 | TCATCAGTTCACCTTGGTTGC | 58.770 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
305 | 306 | 3.254166 | CCTTCATCAGTTCACCTTGGTTG | 59.746 | 47.826 | 0.00 | 0.00 | 0.00 | 3.77 |
306 | 307 | 3.138283 | TCCTTCATCAGTTCACCTTGGTT | 59.862 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
307 | 308 | 2.711009 | TCCTTCATCAGTTCACCTTGGT | 59.289 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
308 | 309 | 3.423539 | TCCTTCATCAGTTCACCTTGG | 57.576 | 47.619 | 0.00 | 0.00 | 0.00 | 3.61 |
309 | 310 | 6.351711 | TGATATCCTTCATCAGTTCACCTTG | 58.648 | 40.000 | 0.00 | 0.00 | 0.00 | 3.61 |
310 | 311 | 6.566079 | TGATATCCTTCATCAGTTCACCTT | 57.434 | 37.500 | 0.00 | 0.00 | 0.00 | 3.50 |
311 | 312 | 6.760440 | ATGATATCCTTCATCAGTTCACCT | 57.240 | 37.500 | 0.00 | 0.00 | 35.93 | 4.00 |
321 | 322 | 5.919348 | ACCCACAAGATGATATCCTTCAT | 57.081 | 39.130 | 0.00 | 0.00 | 39.04 | 2.57 |
322 | 323 | 6.157820 | TGTTACCCACAAGATGATATCCTTCA | 59.842 | 38.462 | 0.00 | 0.00 | 29.87 | 3.02 |
323 | 324 | 6.591935 | TGTTACCCACAAGATGATATCCTTC | 58.408 | 40.000 | 0.00 | 0.00 | 29.87 | 3.46 |
324 | 325 | 6.575244 | TGTTACCCACAAGATGATATCCTT | 57.425 | 37.500 | 0.00 | 0.00 | 29.87 | 3.36 |
325 | 326 | 6.575244 | TTGTTACCCACAAGATGATATCCT | 57.425 | 37.500 | 0.00 | 0.00 | 40.71 | 3.24 |
336 | 337 | 2.360801 | GCTCTTTGCTTGTTACCCACAA | 59.639 | 45.455 | 0.00 | 0.00 | 43.55 | 3.33 |
337 | 338 | 1.953686 | GCTCTTTGCTTGTTACCCACA | 59.046 | 47.619 | 0.00 | 0.00 | 38.95 | 4.17 |
338 | 339 | 1.953686 | TGCTCTTTGCTTGTTACCCAC | 59.046 | 47.619 | 0.00 | 0.00 | 43.37 | 4.61 |
339 | 340 | 1.953686 | GTGCTCTTTGCTTGTTACCCA | 59.046 | 47.619 | 0.00 | 0.00 | 43.37 | 4.51 |
340 | 341 | 2.030805 | CAGTGCTCTTTGCTTGTTACCC | 60.031 | 50.000 | 0.00 | 0.00 | 43.37 | 3.69 |
341 | 342 | 2.878406 | TCAGTGCTCTTTGCTTGTTACC | 59.122 | 45.455 | 0.00 | 0.00 | 43.37 | 2.85 |
342 | 343 | 4.470462 | CATCAGTGCTCTTTGCTTGTTAC | 58.530 | 43.478 | 0.00 | 0.00 | 43.37 | 2.50 |
343 | 344 | 3.503363 | CCATCAGTGCTCTTTGCTTGTTA | 59.497 | 43.478 | 0.00 | 0.00 | 43.37 | 2.41 |
344 | 345 | 2.295349 | CCATCAGTGCTCTTTGCTTGTT | 59.705 | 45.455 | 0.00 | 0.00 | 43.37 | 2.83 |
345 | 346 | 1.884579 | CCATCAGTGCTCTTTGCTTGT | 59.115 | 47.619 | 0.00 | 0.00 | 43.37 | 3.16 |
346 | 347 | 2.156917 | TCCATCAGTGCTCTTTGCTTG | 58.843 | 47.619 | 0.00 | 0.00 | 43.37 | 4.01 |
347 | 348 | 2.574006 | TCCATCAGTGCTCTTTGCTT | 57.426 | 45.000 | 0.00 | 0.00 | 43.37 | 3.91 |
348 | 349 | 2.026542 | TGATCCATCAGTGCTCTTTGCT | 60.027 | 45.455 | 0.00 | 0.00 | 36.04 | 3.91 |
349 | 350 | 2.362736 | TGATCCATCAGTGCTCTTTGC | 58.637 | 47.619 | 0.00 | 0.00 | 35.79 | 3.68 |
350 | 351 | 3.754850 | TGTTGATCCATCAGTGCTCTTTG | 59.245 | 43.478 | 0.00 | 0.00 | 38.19 | 2.77 |
351 | 352 | 4.025040 | TGTTGATCCATCAGTGCTCTTT | 57.975 | 40.909 | 0.00 | 0.00 | 38.19 | 2.52 |
352 | 353 | 3.708403 | TGTTGATCCATCAGTGCTCTT | 57.292 | 42.857 | 0.00 | 0.00 | 38.19 | 2.85 |
353 | 354 | 3.542648 | CATGTTGATCCATCAGTGCTCT | 58.457 | 45.455 | 0.00 | 0.00 | 38.19 | 4.09 |
354 | 355 | 2.617308 | CCATGTTGATCCATCAGTGCTC | 59.383 | 50.000 | 0.00 | 0.00 | 38.19 | 4.26 |
355 | 356 | 2.651455 | CCATGTTGATCCATCAGTGCT | 58.349 | 47.619 | 0.00 | 0.00 | 38.19 | 4.40 |
356 | 357 | 1.066605 | GCCATGTTGATCCATCAGTGC | 59.933 | 52.381 | 0.00 | 0.00 | 38.19 | 4.40 |
357 | 358 | 2.371306 | TGCCATGTTGATCCATCAGTG | 58.629 | 47.619 | 0.00 | 0.00 | 38.19 | 3.66 |
358 | 359 | 2.812836 | TGCCATGTTGATCCATCAGT | 57.187 | 45.000 | 0.00 | 0.00 | 38.19 | 3.41 |
359 | 360 | 3.243737 | CCATTGCCATGTTGATCCATCAG | 60.244 | 47.826 | 0.00 | 0.00 | 38.19 | 2.90 |
360 | 361 | 2.696187 | CCATTGCCATGTTGATCCATCA | 59.304 | 45.455 | 0.00 | 0.00 | 34.44 | 3.07 |
361 | 362 | 2.036733 | CCCATTGCCATGTTGATCCATC | 59.963 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
362 | 363 | 2.043992 | CCCATTGCCATGTTGATCCAT | 58.956 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
363 | 364 | 1.273154 | ACCCATTGCCATGTTGATCCA | 60.273 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
364 | 365 | 1.488390 | ACCCATTGCCATGTTGATCC | 58.512 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
365 | 366 | 2.362077 | GGTACCCATTGCCATGTTGATC | 59.638 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
366 | 367 | 2.387757 | GGTACCCATTGCCATGTTGAT | 58.612 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
492 | 494 | 1.430992 | CTTCCCATACCCATACCCGT | 58.569 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
499 | 501 | 1.144913 | GCTATTGCCTTCCCATACCCA | 59.855 | 52.381 | 0.00 | 0.00 | 0.00 | 4.51 |
518 | 520 | 2.044352 | AGGGTTTGCGGGTATGGC | 60.044 | 61.111 | 0.00 | 0.00 | 0.00 | 4.40 |
543 | 545 | 9.676861 | ACCTACTTGACAGGGTTATTTTTATAC | 57.323 | 33.333 | 0.00 | 0.00 | 37.51 | 1.47 |
617 | 620 | 2.185350 | CGGCTGGTCCAGTGCTAG | 59.815 | 66.667 | 20.24 | 4.11 | 33.43 | 3.42 |
653 | 679 | 1.466866 | GGCGCGGTTTAGAATTGGAAC | 60.467 | 52.381 | 8.83 | 0.00 | 0.00 | 3.62 |
675 | 701 | 1.376249 | AATTGGAAGGGGTGGGGTGT | 61.376 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
683 | 709 | 5.047306 | GGTTTGACTAAAGAATTGGAAGGGG | 60.047 | 44.000 | 0.00 | 0.00 | 0.00 | 4.79 |
698 | 724 | 1.195900 | GCGCACGATTTGGTTTGACTA | 59.804 | 47.619 | 0.30 | 0.00 | 0.00 | 2.59 |
726 | 759 | 2.416260 | GACCGCCTAGGGTTAGCG | 59.584 | 66.667 | 11.72 | 7.14 | 46.96 | 4.26 |
831 | 878 | 3.709141 | GCAAGGAGATTAGGAGAAGGAGT | 59.291 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
843 | 890 | 4.101448 | AGCGGGCGCAAGGAGATT | 62.101 | 61.111 | 10.83 | 0.00 | 44.88 | 2.40 |
867 | 914 | 2.248248 | CTGTGTGTGGTAGAAGGAGGA | 58.752 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
981 | 1028 | 2.746277 | GCGTGTGGATGGGTGGAC | 60.746 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
1012 | 1066 | 0.105778 | GCCTCCTGGATGTCTGCTAC | 59.894 | 60.000 | 0.00 | 0.00 | 34.57 | 3.58 |
1081 | 1135 | 2.479219 | GGTGAGAACTATTCCCGTCGAC | 60.479 | 54.545 | 5.18 | 5.18 | 0.00 | 4.20 |
1115 | 1169 | 3.565482 | GGATGAAGAAGTGCACTTTGACA | 59.435 | 43.478 | 31.58 | 27.19 | 36.11 | 3.58 |
1134 | 1188 | 1.918293 | TGGTTGGAGGCGTGAGGAT | 60.918 | 57.895 | 0.00 | 0.00 | 0.00 | 3.24 |
1188 | 1248 | 3.291101 | GACCTTGTAGCCACCGCGA | 62.291 | 63.158 | 8.23 | 0.00 | 41.18 | 5.87 |
1237 | 1303 | 2.280552 | TAGGAGCAGCCGGACGTTT | 61.281 | 57.895 | 5.05 | 0.00 | 43.43 | 3.60 |
1280 | 1346 | 5.415415 | TCACCAAATTTTTGCCATTTTCG | 57.585 | 34.783 | 0.00 | 0.00 | 36.86 | 3.46 |
1284 | 1350 | 7.938490 | AGAACTATTCACCAAATTTTTGCCATT | 59.062 | 29.630 | 0.00 | 0.00 | 36.86 | 3.16 |
1286 | 1352 | 6.825610 | AGAACTATTCACCAAATTTTTGCCA | 58.174 | 32.000 | 0.00 | 0.00 | 36.86 | 4.92 |
1290 | 1356 | 8.028652 | TGGGAAGAACTATTCACCAAATTTTT | 57.971 | 30.769 | 0.00 | 0.00 | 31.19 | 1.94 |
1324 | 1390 | 9.910511 | CATGCATCAAATAAAATAAGAAAGTGC | 57.089 | 29.630 | 0.00 | 0.00 | 0.00 | 4.40 |
1342 | 1409 | 4.142337 | GGTCATCAACACATTCATGCATCA | 60.142 | 41.667 | 0.00 | 0.00 | 0.00 | 3.07 |
1343 | 1410 | 4.357142 | GGTCATCAACACATTCATGCATC | 58.643 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
1352 | 1419 | 4.402474 | TCACTAGATCGGTCATCAACACAT | 59.598 | 41.667 | 0.00 | 0.00 | 33.29 | 3.21 |
1379 | 1446 | 8.913487 | AGAATCAACTCATGCATCATATACAA | 57.087 | 30.769 | 0.00 | 0.00 | 0.00 | 2.41 |
1458 | 1525 | 9.624697 | TGTTCAATATTGACTAAACAATCAAGC | 57.375 | 29.630 | 17.76 | 0.00 | 40.36 | 4.01 |
1567 | 1637 | 7.330946 | TCATCTAATCGGAAACTACACAAACAG | 59.669 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
1573 | 1643 | 8.197988 | ACAAATCATCTAATCGGAAACTACAC | 57.802 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
1578 | 1648 | 8.638565 | CACAAAACAAATCATCTAATCGGAAAC | 58.361 | 33.333 | 0.00 | 0.00 | 0.00 | 2.78 |
1582 | 1652 | 5.516339 | GCCACAAAACAAATCATCTAATCGG | 59.484 | 40.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1586 | 1656 | 6.757237 | ACATGCCACAAAACAAATCATCTAA | 58.243 | 32.000 | 0.00 | 0.00 | 0.00 | 2.10 |
1605 | 1675 | 6.867816 | TCAATGAATTGGAAACTTGTACATGC | 59.132 | 34.615 | 8.58 | 0.00 | 38.30 | 4.06 |
1606 | 1676 | 8.865978 | CATCAATGAATTGGAAACTTGTACATG | 58.134 | 33.333 | 7.18 | 7.18 | 38.30 | 3.21 |
1609 | 1679 | 8.081633 | TGACATCAATGAATTGGAAACTTGTAC | 58.918 | 33.333 | 3.31 | 0.00 | 38.30 | 2.90 |
1694 | 1764 | 2.579207 | TTCCATCTTCATCGACGGAC | 57.421 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1718 | 1797 | 7.829211 | TCTTCTTCTCCATCGGAAACATAAATT | 59.171 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
1742 | 1827 | 3.715315 | TCTCCATCTCTTTGGCATCATCT | 59.285 | 43.478 | 0.00 | 0.00 | 36.66 | 2.90 |
1752 | 1837 | 6.385766 | AGAAGGTTGAATCTCCATCTCTTT | 57.614 | 37.500 | 0.00 | 0.00 | 27.38 | 2.52 |
1818 | 1906 | 4.428294 | TCCATTCTCCATTGATCCTCAC | 57.572 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
1851 | 1939 | 6.665992 | GGTGAGTATCCTATGACACCAATA | 57.334 | 41.667 | 0.00 | 0.00 | 44.58 | 1.90 |
1864 | 1952 | 2.294791 | CTCGATCCTGTGGTGAGTATCC | 59.705 | 54.545 | 0.00 | 0.00 | 0.00 | 2.59 |
1888 | 1976 | 2.290960 | ACCCCAAGATGCTTAGTTCCAC | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1950 | 2038 | 1.596954 | CCGACTCAAAGTTTTGCCACG | 60.597 | 52.381 | 0.00 | 5.36 | 38.05 | 4.94 |
1999 | 2087 | 1.003580 | TCTCCATGCTCACTTTCCCAC | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
2025 | 2113 | 6.292811 | GCTCTAGCATACTCTTGATCAAAAGC | 60.293 | 42.308 | 8.74 | 3.06 | 41.59 | 3.51 |
2072 | 2160 | 7.495934 | ACCATAGACAAAGGATAATCACGAAAG | 59.504 | 37.037 | 0.00 | 0.00 | 0.00 | 2.62 |
2075 | 2163 | 6.280643 | CACCATAGACAAAGGATAATCACGA | 58.719 | 40.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2077 | 2165 | 6.483640 | GTCCACCATAGACAAAGGATAATCAC | 59.516 | 42.308 | 0.00 | 0.00 | 34.27 | 3.06 |
2131 | 2219 | 4.730657 | CAACTTGAATCATGGCTGAAGTC | 58.269 | 43.478 | 1.24 | 0.00 | 34.37 | 3.01 |
2404 | 2535 | 2.950781 | AGCCTCCAAGACTCATCGATA | 58.049 | 47.619 | 0.00 | 0.00 | 0.00 | 2.92 |
2471 | 2604 | 1.992667 | GGCAAAAGCTTAATGAACCGC | 59.007 | 47.619 | 14.52 | 2.96 | 0.00 | 5.68 |
2472 | 2605 | 3.296322 | TGGCAAAAGCTTAATGAACCG | 57.704 | 42.857 | 14.52 | 0.00 | 0.00 | 4.44 |
2581 | 2741 | 3.201353 | TCCATTTGACCAACGACTCAA | 57.799 | 42.857 | 0.00 | 0.00 | 0.00 | 3.02 |
2595 | 2755 | 8.684520 | CAAGAGCTTTTCATCTAGATTCCATTT | 58.315 | 33.333 | 1.33 | 0.00 | 0.00 | 2.32 |
2629 | 2789 | 5.826586 | ACGTTGACATTGCAATTTCAACTA | 58.173 | 33.333 | 40.62 | 23.51 | 46.31 | 2.24 |
2847 | 3010 | 7.387673 | TGTTATACTTCGCCATATCCTCAAATG | 59.612 | 37.037 | 0.00 | 0.00 | 0.00 | 2.32 |
3091 | 3255 | 2.290323 | GGCAGTCACATAACCAGTTCCT | 60.290 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.