Multiple sequence alignment - TraesCS1D01G135700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G135700 chr1D 100.000 2421 0 0 1 2421 178840410 178837990 0.000000e+00 4471.0
1 TraesCS1D01G135700 chr1B 89.565 1725 155 12 482 2197 250982026 250983734 0.000000e+00 2165.0
2 TraesCS1D01G135700 chr1B 95.096 469 20 3 23 489 146198535 146199002 0.000000e+00 736.0
3 TraesCS1D01G135700 chr1B 90.456 241 23 0 2181 2421 250984047 250984287 3.880000e-83 318.0
4 TraesCS1D01G135700 chr1A 88.584 1130 117 7 482 1604 182176909 182175785 0.000000e+00 1362.0
5 TraesCS1D01G135700 chr1A 86.320 826 98 9 1598 2421 182174830 182174018 0.000000e+00 885.0
6 TraesCS1D01G135700 chr5B 95.299 468 20 2 23 488 202234360 202234827 0.000000e+00 741.0
7 TraesCS1D01G135700 chr5B 95.279 466 20 2 23 486 541399458 541398993 0.000000e+00 737.0
8 TraesCS1D01G135700 chr4B 95.484 465 19 2 23 485 297198503 297198039 0.000000e+00 741.0
9 TraesCS1D01G135700 chr4B 95.279 466 20 2 23 486 318001224 318000759 0.000000e+00 737.0
10 TraesCS1D01G135700 chr6D 95.269 465 20 2 23 485 249459081 249458617 0.000000e+00 736.0
11 TraesCS1D01G135700 chr6B 95.269 465 20 2 23 485 224765901 224765437 0.000000e+00 736.0
12 TraesCS1D01G135700 chr5D 95.064 466 21 2 23 486 192076785 192077250 0.000000e+00 732.0
13 TraesCS1D01G135700 chrUn 93.131 495 27 5 23 515 174329507 174329996 0.000000e+00 719.0
14 TraesCS1D01G135700 chr2D 84.337 83 12 1 2030 2111 585344750 585344668 2.000000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G135700 chr1D 178837990 178840410 2420 True 4471.0 4471 100.0000 1 2421 1 chr1D.!!$R1 2420
1 TraesCS1D01G135700 chr1B 250982026 250984287 2261 False 1241.5 2165 90.0105 482 2421 2 chr1B.!!$F2 1939
2 TraesCS1D01G135700 chr1A 182174018 182176909 2891 True 1123.5 1362 87.4520 482 2421 2 chr1A.!!$R1 1939

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
462 463 0.035725 GTAGGGGCTGTGGGTGTAAC 60.036 60.0 0.0 0.0 0.0 2.5 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1996 2968 0.108662 CTAGTCTGGCATGCGTGTCA 60.109 55.0 13.54 13.54 37.69 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.880941 AGCCCTTTCCCTAGTAGTGG 58.119 55.000 0.00 0.00 0.00 4.00
23 24 1.080666 AGCCCTTTCCCTAGTAGTGGT 59.919 52.381 0.00 0.00 0.00 4.16
24 25 1.914108 GCCCTTTCCCTAGTAGTGGTT 59.086 52.381 0.00 0.00 0.00 3.67
25 26 2.307980 GCCCTTTCCCTAGTAGTGGTTT 59.692 50.000 0.00 0.00 0.00 3.27
26 27 3.621709 GCCCTTTCCCTAGTAGTGGTTTC 60.622 52.174 0.00 0.00 0.00 2.78
27 28 3.054582 CCCTTTCCCTAGTAGTGGTTTCC 60.055 52.174 0.00 0.00 0.00 3.13
28 29 3.054582 CCTTTCCCTAGTAGTGGTTTCCC 60.055 52.174 0.00 0.00 0.00 3.97
29 30 2.259014 TCCCTAGTAGTGGTTTCCCC 57.741 55.000 0.00 0.00 0.00 4.81
30 31 1.437945 TCCCTAGTAGTGGTTTCCCCA 59.562 52.381 0.00 0.00 42.51 4.96
38 39 3.635271 TGGTTTCCCCACACATACG 57.365 52.632 0.00 0.00 38.72 3.06
39 40 0.037017 TGGTTTCCCCACACATACGG 59.963 55.000 0.00 0.00 38.72 4.02
40 41 0.325602 GGTTTCCCCACACATACGGA 59.674 55.000 0.00 0.00 0.00 4.69
41 42 1.445871 GTTTCCCCACACATACGGAC 58.554 55.000 0.00 0.00 0.00 4.79
42 43 1.002773 GTTTCCCCACACATACGGACT 59.997 52.381 0.00 0.00 0.00 3.85
43 44 0.899720 TTCCCCACACATACGGACTC 59.100 55.000 0.00 0.00 0.00 3.36
44 45 0.040646 TCCCCACACATACGGACTCT 59.959 55.000 0.00 0.00 0.00 3.24
45 46 1.285667 TCCCCACACATACGGACTCTA 59.714 52.381 0.00 0.00 0.00 2.43
46 47 2.104967 CCCCACACATACGGACTCTAA 58.895 52.381 0.00 0.00 0.00 2.10
47 48 2.498481 CCCCACACATACGGACTCTAAA 59.502 50.000 0.00 0.00 0.00 1.85
48 49 3.055675 CCCCACACATACGGACTCTAAAA 60.056 47.826 0.00 0.00 0.00 1.52
49 50 4.563993 CCCCACACATACGGACTCTAAAAA 60.564 45.833 0.00 0.00 0.00 1.94
50 51 4.390909 CCCACACATACGGACTCTAAAAAC 59.609 45.833 0.00 0.00 0.00 2.43
51 52 4.992319 CCACACATACGGACTCTAAAAACA 59.008 41.667 0.00 0.00 0.00 2.83
52 53 5.120208 CCACACATACGGACTCTAAAAACAG 59.880 44.000 0.00 0.00 0.00 3.16
53 54 4.689345 ACACATACGGACTCTAAAAACAGC 59.311 41.667 0.00 0.00 0.00 4.40
54 55 4.092968 CACATACGGACTCTAAAAACAGCC 59.907 45.833 0.00 0.00 0.00 4.85
55 56 4.020485 ACATACGGACTCTAAAAACAGCCT 60.020 41.667 0.00 0.00 0.00 4.58
56 57 5.186409 ACATACGGACTCTAAAAACAGCCTA 59.814 40.000 0.00 0.00 0.00 3.93
57 58 4.820894 ACGGACTCTAAAAACAGCCTAT 57.179 40.909 0.00 0.00 0.00 2.57
58 59 5.927281 ACGGACTCTAAAAACAGCCTATA 57.073 39.130 0.00 0.00 0.00 1.31
59 60 5.658468 ACGGACTCTAAAAACAGCCTATAC 58.342 41.667 0.00 0.00 0.00 1.47
60 61 5.421374 ACGGACTCTAAAAACAGCCTATACT 59.579 40.000 0.00 0.00 0.00 2.12
61 62 6.070938 ACGGACTCTAAAAACAGCCTATACTT 60.071 38.462 0.00 0.00 0.00 2.24
62 63 7.123247 ACGGACTCTAAAAACAGCCTATACTTA 59.877 37.037 0.00 0.00 0.00 2.24
63 64 8.142551 CGGACTCTAAAAACAGCCTATACTTAT 58.857 37.037 0.00 0.00 0.00 1.73
64 65 9.262358 GGACTCTAAAAACAGCCTATACTTATG 57.738 37.037 0.00 0.00 0.00 1.90
65 66 9.819267 GACTCTAAAAACAGCCTATACTTATGT 57.181 33.333 0.00 0.00 0.00 2.29
72 73 9.826574 AAAACAGCCTATACTTATGTATTTCGA 57.173 29.630 6.59 0.00 39.77 3.71
73 74 9.826574 AAACAGCCTATACTTATGTATTTCGAA 57.173 29.630 6.59 0.00 39.77 3.71
74 75 9.826574 AACAGCCTATACTTATGTATTTCGAAA 57.173 29.630 13.91 13.91 39.77 3.46
75 76 9.998106 ACAGCCTATACTTATGTATTTCGAAAT 57.002 29.630 25.48 25.48 39.77 2.17
84 85 8.349983 ACTTATGTATTTCGAAATTACATGGGC 58.650 33.333 30.65 16.06 33.88 5.36
85 86 5.508200 TGTATTTCGAAATTACATGGGCC 57.492 39.130 27.10 0.00 0.00 5.80
86 87 5.197451 TGTATTTCGAAATTACATGGGCCT 58.803 37.500 27.10 3.21 0.00 5.19
87 88 4.654091 ATTTCGAAATTACATGGGCCTG 57.346 40.909 17.60 3.00 0.00 4.85
88 89 1.388547 TCGAAATTACATGGGCCTGC 58.611 50.000 4.53 0.00 0.00 4.85
89 90 0.385390 CGAAATTACATGGGCCTGCC 59.615 55.000 4.53 0.00 0.00 4.85
101 102 2.381752 GGCCTGCCCAATAATAAGGT 57.618 50.000 0.00 0.00 0.00 3.50
102 103 1.963515 GGCCTGCCCAATAATAAGGTG 59.036 52.381 0.00 0.00 0.00 4.00
103 104 2.424234 GGCCTGCCCAATAATAAGGTGA 60.424 50.000 0.00 0.00 0.00 4.02
104 105 3.295973 GCCTGCCCAATAATAAGGTGAA 58.704 45.455 0.00 0.00 0.00 3.18
105 106 3.319122 GCCTGCCCAATAATAAGGTGAAG 59.681 47.826 0.00 0.00 0.00 3.02
106 107 4.536765 CCTGCCCAATAATAAGGTGAAGT 58.463 43.478 0.00 0.00 0.00 3.01
107 108 5.690865 CCTGCCCAATAATAAGGTGAAGTA 58.309 41.667 0.00 0.00 0.00 2.24
108 109 5.765182 CCTGCCCAATAATAAGGTGAAGTAG 59.235 44.000 0.00 0.00 0.00 2.57
109 110 5.130350 TGCCCAATAATAAGGTGAAGTAGC 58.870 41.667 0.00 0.00 0.00 3.58
110 111 5.130350 GCCCAATAATAAGGTGAAGTAGCA 58.870 41.667 0.00 0.00 0.00 3.49
111 112 5.008712 GCCCAATAATAAGGTGAAGTAGCAC 59.991 44.000 0.00 0.00 38.05 4.40
122 123 4.623002 GTGAAGTAGCACCTAGAATAGCC 58.377 47.826 0.00 0.00 37.37 3.93
123 124 4.342665 GTGAAGTAGCACCTAGAATAGCCT 59.657 45.833 0.00 0.00 37.37 4.58
124 125 4.585162 TGAAGTAGCACCTAGAATAGCCTC 59.415 45.833 0.00 0.00 37.37 4.70
125 126 4.463050 AGTAGCACCTAGAATAGCCTCT 57.537 45.455 0.00 0.00 37.37 3.69
126 127 4.148838 AGTAGCACCTAGAATAGCCTCTG 58.851 47.826 0.00 0.00 37.37 3.35
127 128 2.324541 AGCACCTAGAATAGCCTCTGG 58.675 52.381 0.00 0.00 37.37 3.86
128 129 2.091055 AGCACCTAGAATAGCCTCTGGA 60.091 50.000 0.00 0.00 37.37 3.86
129 130 2.903135 GCACCTAGAATAGCCTCTGGAT 59.097 50.000 0.00 0.00 37.37 3.41
130 131 3.306641 GCACCTAGAATAGCCTCTGGATG 60.307 52.174 0.00 0.00 37.37 3.51
131 132 4.155709 CACCTAGAATAGCCTCTGGATGA 58.844 47.826 0.00 0.00 37.37 2.92
132 133 4.220382 CACCTAGAATAGCCTCTGGATGAG 59.780 50.000 0.00 0.00 37.37 2.90
133 134 4.107149 ACCTAGAATAGCCTCTGGATGAGA 59.893 45.833 0.00 0.00 40.35 3.27
134 135 5.222526 ACCTAGAATAGCCTCTGGATGAGAT 60.223 44.000 0.00 0.00 40.35 2.75
135 136 5.721000 CCTAGAATAGCCTCTGGATGAGATT 59.279 44.000 0.00 0.00 40.35 2.40
136 137 6.213195 CCTAGAATAGCCTCTGGATGAGATTT 59.787 42.308 0.00 0.00 40.35 2.17
137 138 7.398618 CCTAGAATAGCCTCTGGATGAGATTTA 59.601 40.741 0.00 0.00 40.35 1.40
138 139 7.811482 AGAATAGCCTCTGGATGAGATTTAT 57.189 36.000 0.00 0.00 45.39 1.40
139 140 7.622713 AGAATAGCCTCTGGATGAGATTTATG 58.377 38.462 0.00 0.00 45.39 1.90
140 141 7.457218 AGAATAGCCTCTGGATGAGATTTATGA 59.543 37.037 0.00 0.00 45.39 2.15
141 142 5.901413 AGCCTCTGGATGAGATTTATGAA 57.099 39.130 0.00 0.00 45.39 2.57
142 143 5.867330 AGCCTCTGGATGAGATTTATGAAG 58.133 41.667 0.00 0.00 45.39 3.02
143 144 5.369110 AGCCTCTGGATGAGATTTATGAAGT 59.631 40.000 0.00 0.00 45.39 3.01
144 145 5.469421 GCCTCTGGATGAGATTTATGAAGTG 59.531 44.000 0.00 0.00 45.39 3.16
145 146 5.996513 CCTCTGGATGAGATTTATGAAGTGG 59.003 44.000 0.00 0.00 45.39 4.00
146 147 5.371526 TCTGGATGAGATTTATGAAGTGGC 58.628 41.667 0.00 0.00 0.00 5.01
147 148 4.129380 TGGATGAGATTTATGAAGTGGCG 58.871 43.478 0.00 0.00 0.00 5.69
148 149 4.130118 GGATGAGATTTATGAAGTGGCGT 58.870 43.478 0.00 0.00 0.00 5.68
149 150 4.212214 GGATGAGATTTATGAAGTGGCGTC 59.788 45.833 0.00 0.00 0.00 5.19
150 151 4.471904 TGAGATTTATGAAGTGGCGTCT 57.528 40.909 0.00 0.00 0.00 4.18
151 152 4.832248 TGAGATTTATGAAGTGGCGTCTT 58.168 39.130 0.00 0.00 0.00 3.01
152 153 4.631377 TGAGATTTATGAAGTGGCGTCTTG 59.369 41.667 0.00 0.00 0.00 3.02
153 154 4.579869 AGATTTATGAAGTGGCGTCTTGT 58.420 39.130 0.00 0.00 0.00 3.16
154 155 5.730550 AGATTTATGAAGTGGCGTCTTGTA 58.269 37.500 0.00 0.00 0.00 2.41
155 156 6.349300 AGATTTATGAAGTGGCGTCTTGTAT 58.651 36.000 0.00 0.00 0.00 2.29
156 157 7.497595 AGATTTATGAAGTGGCGTCTTGTATA 58.502 34.615 0.00 0.00 0.00 1.47
157 158 8.150945 AGATTTATGAAGTGGCGTCTTGTATAT 58.849 33.333 0.00 0.00 0.00 0.86
158 159 8.677148 ATTTATGAAGTGGCGTCTTGTATATT 57.323 30.769 0.00 0.00 0.00 1.28
159 160 8.500753 TTTATGAAGTGGCGTCTTGTATATTT 57.499 30.769 0.00 0.00 0.00 1.40
160 161 9.602568 TTTATGAAGTGGCGTCTTGTATATTTA 57.397 29.630 0.00 0.00 0.00 1.40
161 162 7.715265 ATGAAGTGGCGTCTTGTATATTTAG 57.285 36.000 0.00 0.00 0.00 1.85
162 163 6.636705 TGAAGTGGCGTCTTGTATATTTAGT 58.363 36.000 0.00 0.00 0.00 2.24
163 164 6.755141 TGAAGTGGCGTCTTGTATATTTAGTC 59.245 38.462 0.00 0.00 0.00 2.59
164 165 5.598769 AGTGGCGTCTTGTATATTTAGTCC 58.401 41.667 0.00 0.00 0.00 3.85
165 166 5.128171 AGTGGCGTCTTGTATATTTAGTCCA 59.872 40.000 0.00 0.00 0.00 4.02
166 167 5.813672 GTGGCGTCTTGTATATTTAGTCCAA 59.186 40.000 0.00 0.00 0.00 3.53
167 168 6.018994 GTGGCGTCTTGTATATTTAGTCCAAG 60.019 42.308 0.00 0.00 35.09 3.61
168 169 5.465724 GGCGTCTTGTATATTTAGTCCAAGG 59.534 44.000 0.00 0.00 34.65 3.61
169 170 5.050295 GCGTCTTGTATATTTAGTCCAAGGC 60.050 44.000 0.00 0.00 35.09 4.35
170 171 6.281405 CGTCTTGTATATTTAGTCCAAGGCT 58.719 40.000 0.00 0.00 36.01 4.58
171 172 6.761714 CGTCTTGTATATTTAGTCCAAGGCTT 59.238 38.462 0.00 0.00 36.01 4.35
172 173 7.042658 CGTCTTGTATATTTAGTCCAAGGCTTC 60.043 40.741 0.00 0.00 36.01 3.86
173 174 7.769044 GTCTTGTATATTTAGTCCAAGGCTTCA 59.231 37.037 0.00 0.00 35.46 3.02
174 175 8.494433 TCTTGTATATTTAGTCCAAGGCTTCAT 58.506 33.333 0.00 0.00 34.65 2.57
175 176 8.450578 TTGTATATTTAGTCCAAGGCTTCATG 57.549 34.615 0.00 0.00 0.00 3.07
176 177 6.486657 TGTATATTTAGTCCAAGGCTTCATGC 59.513 38.462 0.00 0.00 41.94 4.06
177 178 2.877097 TTAGTCCAAGGCTTCATGCA 57.123 45.000 0.00 0.00 45.15 3.96
178 179 2.113860 TAGTCCAAGGCTTCATGCAC 57.886 50.000 0.00 0.00 45.15 4.57
179 180 0.403271 AGTCCAAGGCTTCATGCACT 59.597 50.000 0.00 0.00 45.15 4.40
180 181 0.807496 GTCCAAGGCTTCATGCACTC 59.193 55.000 0.00 0.00 45.15 3.51
181 182 0.401356 TCCAAGGCTTCATGCACTCA 59.599 50.000 0.00 0.00 45.15 3.41
182 183 1.005097 TCCAAGGCTTCATGCACTCAT 59.995 47.619 0.00 0.00 45.15 2.90
183 184 1.822990 CCAAGGCTTCATGCACTCATT 59.177 47.619 0.00 0.00 45.15 2.57
184 185 3.018856 CCAAGGCTTCATGCACTCATTA 58.981 45.455 0.00 0.00 45.15 1.90
185 186 3.635373 CCAAGGCTTCATGCACTCATTAT 59.365 43.478 0.00 0.00 45.15 1.28
186 187 4.499188 CCAAGGCTTCATGCACTCATTATG 60.499 45.833 0.00 0.00 45.15 1.90
187 188 4.160642 AGGCTTCATGCACTCATTATGA 57.839 40.909 0.00 0.00 45.15 2.15
188 189 4.726583 AGGCTTCATGCACTCATTATGAT 58.273 39.130 0.00 0.00 45.15 2.45
189 190 4.519350 AGGCTTCATGCACTCATTATGATG 59.481 41.667 0.00 0.00 45.15 3.07
190 191 4.321008 GGCTTCATGCACTCATTATGATGG 60.321 45.833 0.00 0.00 45.15 3.51
191 192 4.795268 CTTCATGCACTCATTATGATGGC 58.205 43.478 10.12 10.12 33.93 4.40
192 193 4.094830 TCATGCACTCATTATGATGGCT 57.905 40.909 15.65 3.49 33.93 4.75
193 194 4.466827 TCATGCACTCATTATGATGGCTT 58.533 39.130 15.65 9.20 33.93 4.35
194 195 4.517832 TCATGCACTCATTATGATGGCTTC 59.482 41.667 15.65 0.00 33.93 3.86
195 196 3.888583 TGCACTCATTATGATGGCTTCA 58.111 40.909 15.65 5.47 39.12 3.02
196 197 4.271661 TGCACTCATTATGATGGCTTCAA 58.728 39.130 15.65 0.00 38.03 2.69
197 198 4.705991 TGCACTCATTATGATGGCTTCAAA 59.294 37.500 15.65 4.27 38.03 2.69
198 199 5.163591 TGCACTCATTATGATGGCTTCAAAG 60.164 40.000 15.65 3.61 38.03 2.77
199 200 5.163581 GCACTCATTATGATGGCTTCAAAGT 60.164 40.000 7.20 4.15 38.03 2.66
200 201 6.493116 CACTCATTATGATGGCTTCAAAGTC 58.507 40.000 7.20 0.00 38.03 3.01
201 202 5.591877 ACTCATTATGATGGCTTCAAAGTCC 59.408 40.000 7.20 0.00 38.03 3.85
202 203 5.759059 TCATTATGATGGCTTCAAAGTCCT 58.241 37.500 7.20 0.00 38.03 3.85
203 204 5.824624 TCATTATGATGGCTTCAAAGTCCTC 59.175 40.000 7.20 0.00 38.03 3.71
204 205 3.726557 ATGATGGCTTCAAAGTCCTCA 57.273 42.857 7.20 5.07 38.03 3.86
205 206 3.507162 TGATGGCTTCAAAGTCCTCAA 57.493 42.857 0.00 0.00 0.00 3.02
206 207 4.038271 TGATGGCTTCAAAGTCCTCAAT 57.962 40.909 0.00 0.00 0.00 2.57
207 208 4.410099 TGATGGCTTCAAAGTCCTCAATT 58.590 39.130 0.00 0.00 0.00 2.32
208 209 4.460382 TGATGGCTTCAAAGTCCTCAATTC 59.540 41.667 0.00 0.00 0.00 2.17
209 210 3.831323 TGGCTTCAAAGTCCTCAATTCA 58.169 40.909 0.00 0.00 0.00 2.57
210 211 4.410099 TGGCTTCAAAGTCCTCAATTCAT 58.590 39.130 0.00 0.00 0.00 2.57
211 212 4.460382 TGGCTTCAAAGTCCTCAATTCATC 59.540 41.667 0.00 0.00 0.00 2.92
212 213 4.460382 GGCTTCAAAGTCCTCAATTCATCA 59.540 41.667 0.00 0.00 0.00 3.07
213 214 5.397326 GCTTCAAAGTCCTCAATTCATCAC 58.603 41.667 0.00 0.00 0.00 3.06
214 215 5.182760 GCTTCAAAGTCCTCAATTCATCACT 59.817 40.000 0.00 0.00 0.00 3.41
215 216 6.294397 GCTTCAAAGTCCTCAATTCATCACTT 60.294 38.462 0.00 0.00 0.00 3.16
216 217 6.564709 TCAAAGTCCTCAATTCATCACTTG 57.435 37.500 0.00 0.00 0.00 3.16
217 218 6.064060 TCAAAGTCCTCAATTCATCACTTGT 58.936 36.000 0.00 0.00 0.00 3.16
218 219 7.223584 TCAAAGTCCTCAATTCATCACTTGTA 58.776 34.615 0.00 0.00 0.00 2.41
219 220 7.719193 TCAAAGTCCTCAATTCATCACTTGTAA 59.281 33.333 0.00 0.00 0.00 2.41
220 221 7.440523 AAGTCCTCAATTCATCACTTGTAAC 57.559 36.000 0.00 0.00 0.00 2.50
221 222 6.773638 AGTCCTCAATTCATCACTTGTAACT 58.226 36.000 0.00 0.00 0.00 2.24
222 223 6.876257 AGTCCTCAATTCATCACTTGTAACTC 59.124 38.462 0.00 0.00 0.00 3.01
223 224 6.092807 GTCCTCAATTCATCACTTGTAACTCC 59.907 42.308 0.00 0.00 0.00 3.85
224 225 5.063944 CCTCAATTCATCACTTGTAACTCCG 59.936 44.000 0.00 0.00 0.00 4.63
225 226 5.547465 TCAATTCATCACTTGTAACTCCGT 58.453 37.500 0.00 0.00 0.00 4.69
226 227 5.995282 TCAATTCATCACTTGTAACTCCGTT 59.005 36.000 0.00 0.00 0.00 4.44
227 228 6.147164 TCAATTCATCACTTGTAACTCCGTTC 59.853 38.462 0.00 0.00 0.00 3.95
228 229 4.866508 TCATCACTTGTAACTCCGTTCT 57.133 40.909 0.00 0.00 0.00 3.01
229 230 5.209818 TCATCACTTGTAACTCCGTTCTT 57.790 39.130 0.00 0.00 0.00 2.52
230 231 4.988540 TCATCACTTGTAACTCCGTTCTTG 59.011 41.667 0.00 0.00 0.00 3.02
231 232 4.395959 TCACTTGTAACTCCGTTCTTGT 57.604 40.909 0.00 0.00 0.00 3.16
232 233 4.761975 TCACTTGTAACTCCGTTCTTGTT 58.238 39.130 0.00 0.00 0.00 2.83
233 234 4.807304 TCACTTGTAACTCCGTTCTTGTTC 59.193 41.667 0.00 0.00 0.00 3.18
234 235 4.025145 CACTTGTAACTCCGTTCTTGTTCC 60.025 45.833 0.00 0.00 0.00 3.62
235 236 3.116079 TGTAACTCCGTTCTTGTTCCC 57.884 47.619 0.00 0.00 0.00 3.97
236 237 2.224354 TGTAACTCCGTTCTTGTTCCCC 60.224 50.000 0.00 0.00 0.00 4.81
237 238 1.137697 AACTCCGTTCTTGTTCCCCT 58.862 50.000 0.00 0.00 0.00 4.79
238 239 1.137697 ACTCCGTTCTTGTTCCCCTT 58.862 50.000 0.00 0.00 0.00 3.95
239 240 1.202770 ACTCCGTTCTTGTTCCCCTTG 60.203 52.381 0.00 0.00 0.00 3.61
240 241 0.536460 TCCGTTCTTGTTCCCCTTGC 60.536 55.000 0.00 0.00 0.00 4.01
241 242 1.574428 CGTTCTTGTTCCCCTTGCG 59.426 57.895 0.00 0.00 0.00 4.85
242 243 1.285950 GTTCTTGTTCCCCTTGCGC 59.714 57.895 0.00 0.00 0.00 6.09
243 244 1.152860 TTCTTGTTCCCCTTGCGCA 60.153 52.632 5.66 5.66 0.00 6.09
244 245 0.539438 TTCTTGTTCCCCTTGCGCAT 60.539 50.000 12.75 0.00 0.00 4.73
245 246 1.213537 CTTGTTCCCCTTGCGCATG 59.786 57.895 12.75 14.64 0.00 4.06
246 247 2.824071 CTTGTTCCCCTTGCGCATGC 62.824 60.000 12.75 7.91 43.20 4.06
247 248 4.133796 GTTCCCCTTGCGCATGCC 62.134 66.667 12.75 5.63 41.78 4.40
252 253 3.511595 CCTTGCGCATGCCGTCAT 61.512 61.111 12.75 0.00 41.78 3.06
253 254 2.023741 CTTGCGCATGCCGTCATC 59.976 61.111 12.75 0.00 41.78 2.92
254 255 2.436469 TTGCGCATGCCGTCATCT 60.436 55.556 12.75 0.00 41.78 2.90
255 256 2.370824 CTTGCGCATGCCGTCATCTC 62.371 60.000 12.75 0.00 41.78 2.75
256 257 3.643978 GCGCATGCCGTCATCTCC 61.644 66.667 13.15 0.00 39.71 3.71
257 258 2.202919 CGCATGCCGTCATCTCCA 60.203 61.111 13.15 0.00 0.00 3.86
258 259 1.596203 CGCATGCCGTCATCTCCAT 60.596 57.895 13.15 0.00 0.00 3.41
259 260 1.838568 CGCATGCCGTCATCTCCATG 61.839 60.000 13.15 0.00 38.41 3.66
260 261 1.947013 CATGCCGTCATCTCCATGC 59.053 57.895 0.00 0.00 0.00 4.06
261 262 0.534427 CATGCCGTCATCTCCATGCT 60.534 55.000 0.00 0.00 0.00 3.79
262 263 0.182061 ATGCCGTCATCTCCATGCTT 59.818 50.000 0.00 0.00 0.00 3.91
263 264 0.745486 TGCCGTCATCTCCATGCTTG 60.745 55.000 0.00 0.00 0.00 4.01
264 265 1.442526 GCCGTCATCTCCATGCTTGG 61.443 60.000 12.41 12.41 45.15 3.61
265 266 0.107508 CCGTCATCTCCATGCTTGGT 60.108 55.000 17.54 0.00 44.06 3.67
266 267 1.293924 CGTCATCTCCATGCTTGGTC 58.706 55.000 17.54 3.51 44.06 4.02
267 268 1.134580 CGTCATCTCCATGCTTGGTCT 60.135 52.381 17.54 2.14 44.06 3.85
268 269 2.679059 CGTCATCTCCATGCTTGGTCTT 60.679 50.000 17.54 1.98 44.06 3.01
269 270 3.430790 CGTCATCTCCATGCTTGGTCTTA 60.431 47.826 17.54 3.53 44.06 2.10
270 271 3.873952 GTCATCTCCATGCTTGGTCTTAC 59.126 47.826 17.54 7.96 44.06 2.34
271 272 3.776969 TCATCTCCATGCTTGGTCTTACT 59.223 43.478 17.54 0.00 44.06 2.24
272 273 3.895232 TCTCCATGCTTGGTCTTACTC 57.105 47.619 17.54 0.00 44.06 2.59
273 274 2.501723 TCTCCATGCTTGGTCTTACTCC 59.498 50.000 17.54 0.00 44.06 3.85
274 275 2.237143 CTCCATGCTTGGTCTTACTCCA 59.763 50.000 17.54 0.00 44.06 3.86
275 276 2.642311 TCCATGCTTGGTCTTACTCCAA 59.358 45.455 17.54 0.00 44.06 3.53
276 277 3.266772 TCCATGCTTGGTCTTACTCCAAT 59.733 43.478 17.54 0.00 42.89 3.16
277 278 3.379372 CCATGCTTGGTCTTACTCCAATG 59.621 47.826 10.48 0.00 42.89 2.82
278 279 3.788227 TGCTTGGTCTTACTCCAATGT 57.212 42.857 0.00 0.00 42.89 2.71
279 280 4.098914 TGCTTGGTCTTACTCCAATGTT 57.901 40.909 0.00 0.00 42.89 2.71
280 281 4.072131 TGCTTGGTCTTACTCCAATGTTC 58.928 43.478 0.00 0.00 42.89 3.18
281 282 4.072131 GCTTGGTCTTACTCCAATGTTCA 58.928 43.478 0.00 0.00 42.89 3.18
282 283 4.702131 GCTTGGTCTTACTCCAATGTTCAT 59.298 41.667 0.00 0.00 42.89 2.57
283 284 5.163713 GCTTGGTCTTACTCCAATGTTCATC 60.164 44.000 0.00 0.00 42.89 2.92
284 285 4.843728 TGGTCTTACTCCAATGTTCATCC 58.156 43.478 0.00 0.00 31.50 3.51
285 286 4.536090 TGGTCTTACTCCAATGTTCATCCT 59.464 41.667 0.00 0.00 31.50 3.24
286 287 5.014123 TGGTCTTACTCCAATGTTCATCCTT 59.986 40.000 0.00 0.00 31.50 3.36
287 288 5.586643 GGTCTTACTCCAATGTTCATCCTTC 59.413 44.000 0.00 0.00 0.00 3.46
288 289 6.410540 GTCTTACTCCAATGTTCATCCTTCT 58.589 40.000 0.00 0.00 0.00 2.85
289 290 6.536941 GTCTTACTCCAATGTTCATCCTTCTC 59.463 42.308 0.00 0.00 0.00 2.87
290 291 4.227864 ACTCCAATGTTCATCCTTCTCC 57.772 45.455 0.00 0.00 0.00 3.71
291 292 3.588842 ACTCCAATGTTCATCCTTCTCCA 59.411 43.478 0.00 0.00 0.00 3.86
292 293 4.043310 ACTCCAATGTTCATCCTTCTCCAA 59.957 41.667 0.00 0.00 0.00 3.53
293 294 4.592942 TCCAATGTTCATCCTTCTCCAAG 58.407 43.478 0.00 0.00 0.00 3.61
294 295 3.129988 CCAATGTTCATCCTTCTCCAAGC 59.870 47.826 0.00 0.00 0.00 4.01
295 296 4.015084 CAATGTTCATCCTTCTCCAAGCT 58.985 43.478 0.00 0.00 0.00 3.74
296 297 5.188434 CAATGTTCATCCTTCTCCAAGCTA 58.812 41.667 0.00 0.00 0.00 3.32
297 298 4.478206 TGTTCATCCTTCTCCAAGCTAG 57.522 45.455 0.00 0.00 0.00 3.42
298 299 3.198635 TGTTCATCCTTCTCCAAGCTAGG 59.801 47.826 0.00 0.00 0.00 3.02
299 300 1.765314 TCATCCTTCTCCAAGCTAGGC 59.235 52.381 0.00 0.00 0.00 3.93
300 301 1.135960 ATCCTTCTCCAAGCTAGGCC 58.864 55.000 0.00 0.00 0.00 5.19
301 302 0.983378 TCCTTCTCCAAGCTAGGCCC 60.983 60.000 0.00 0.00 0.00 5.80
302 303 0.985490 CCTTCTCCAAGCTAGGCCCT 60.985 60.000 0.00 0.00 0.00 5.19
303 304 0.915364 CTTCTCCAAGCTAGGCCCTT 59.085 55.000 0.00 0.00 0.00 3.95
304 305 0.912486 TTCTCCAAGCTAGGCCCTTC 59.088 55.000 0.00 0.00 0.00 3.46
305 306 0.252696 TCTCCAAGCTAGGCCCTTCA 60.253 55.000 0.00 0.00 0.00 3.02
306 307 0.842635 CTCCAAGCTAGGCCCTTCAT 59.157 55.000 0.00 0.00 0.00 2.57
307 308 1.213926 CTCCAAGCTAGGCCCTTCATT 59.786 52.381 0.00 0.00 0.00 2.57
308 309 1.640670 TCCAAGCTAGGCCCTTCATTT 59.359 47.619 0.00 0.00 0.00 2.32
309 310 1.753073 CCAAGCTAGGCCCTTCATTTG 59.247 52.381 0.00 0.00 0.00 2.32
310 311 2.450476 CAAGCTAGGCCCTTCATTTGT 58.550 47.619 0.00 0.00 0.00 2.83
311 312 3.620488 CAAGCTAGGCCCTTCATTTGTA 58.380 45.455 0.00 0.00 0.00 2.41
312 313 4.016444 CAAGCTAGGCCCTTCATTTGTAA 58.984 43.478 0.00 0.00 0.00 2.41
313 314 3.891049 AGCTAGGCCCTTCATTTGTAAG 58.109 45.455 0.00 0.00 0.00 2.34
314 315 2.359214 GCTAGGCCCTTCATTTGTAAGC 59.641 50.000 0.00 0.00 0.00 3.09
315 316 2.603075 AGGCCCTTCATTTGTAAGCA 57.397 45.000 0.00 0.00 0.00 3.91
316 317 2.888212 AGGCCCTTCATTTGTAAGCAA 58.112 42.857 0.00 0.00 0.00 3.91
318 319 3.645687 AGGCCCTTCATTTGTAAGCAAAA 59.354 39.130 0.00 0.00 46.23 2.44
319 320 3.745975 GGCCCTTCATTTGTAAGCAAAAC 59.254 43.478 0.00 0.00 46.23 2.43
320 321 4.376146 GCCCTTCATTTGTAAGCAAAACA 58.624 39.130 0.00 0.00 46.23 2.83
321 322 4.813697 GCCCTTCATTTGTAAGCAAAACAA 59.186 37.500 0.00 0.00 46.23 2.83
331 332 8.948631 TTTGTAAGCAAAACAAATGTATCCAA 57.051 26.923 7.05 0.00 40.83 3.53
332 333 9.553064 TTTGTAAGCAAAACAAATGTATCCAAT 57.447 25.926 7.05 0.00 40.83 3.16
333 334 9.553064 TTGTAAGCAAAACAAATGTATCCAATT 57.447 25.926 0.00 0.00 34.04 2.32
334 335 9.553064 TGTAAGCAAAACAAATGTATCCAATTT 57.447 25.926 0.00 0.00 0.00 1.82
335 336 9.810231 GTAAGCAAAACAAATGTATCCAATTTG 57.190 29.630 7.21 7.21 40.14 2.32
336 337 7.437793 AGCAAAACAAATGTATCCAATTTGG 57.562 32.000 9.28 9.28 39.01 3.28
337 338 6.072563 AGCAAAACAAATGTATCCAATTTGGC 60.073 34.615 10.76 6.74 39.01 4.52
338 339 6.293845 GCAAAACAAATGTATCCAATTTGGCA 60.294 34.615 10.76 3.74 39.01 4.92
339 340 7.299586 CAAAACAAATGTATCCAATTTGGCAG 58.700 34.615 10.76 0.00 39.01 4.85
340 341 4.506758 ACAAATGTATCCAATTTGGCAGC 58.493 39.130 10.76 3.69 39.01 5.25
341 342 4.020396 ACAAATGTATCCAATTTGGCAGCA 60.020 37.500 10.76 8.90 39.01 4.41
342 343 5.120399 CAAATGTATCCAATTTGGCAGCAT 58.880 37.500 10.76 10.62 37.47 3.79
343 344 4.595762 ATGTATCCAATTTGGCAGCATC 57.404 40.909 10.76 0.00 37.47 3.91
344 345 3.363627 TGTATCCAATTTGGCAGCATCA 58.636 40.909 10.76 1.92 37.47 3.07
345 346 3.962063 TGTATCCAATTTGGCAGCATCAT 59.038 39.130 10.76 0.08 37.47 2.45
346 347 5.139001 TGTATCCAATTTGGCAGCATCATA 58.861 37.500 10.76 0.00 37.47 2.15
347 348 5.776208 TGTATCCAATTTGGCAGCATCATAT 59.224 36.000 10.76 0.00 37.47 1.78
348 349 5.818678 ATCCAATTTGGCAGCATCATATT 57.181 34.783 10.76 0.00 37.47 1.28
349 350 5.204409 TCCAATTTGGCAGCATCATATTC 57.796 39.130 10.76 0.00 37.47 1.75
350 351 4.897076 TCCAATTTGGCAGCATCATATTCT 59.103 37.500 10.76 0.00 37.47 2.40
351 352 5.010314 TCCAATTTGGCAGCATCATATTCTC 59.990 40.000 10.76 0.00 37.47 2.87
352 353 5.221362 CCAATTTGGCAGCATCATATTCTCA 60.221 40.000 1.71 0.00 0.00 3.27
353 354 6.455647 CAATTTGGCAGCATCATATTCTCAT 58.544 36.000 0.00 0.00 0.00 2.90
354 355 5.447624 TTTGGCAGCATCATATTCTCATG 57.552 39.130 0.00 0.00 0.00 3.07
355 356 4.360951 TGGCAGCATCATATTCTCATGA 57.639 40.909 0.00 0.00 39.20 3.07
356 357 4.721132 TGGCAGCATCATATTCTCATGAA 58.279 39.130 0.00 0.00 38.39 2.57
357 358 4.517832 TGGCAGCATCATATTCTCATGAAC 59.482 41.667 0.00 0.00 38.39 3.18
358 359 4.517832 GGCAGCATCATATTCTCATGAACA 59.482 41.667 0.00 0.00 38.39 3.18
359 360 5.183331 GGCAGCATCATATTCTCATGAACAT 59.817 40.000 0.00 0.00 38.39 2.71
360 361 6.294564 GGCAGCATCATATTCTCATGAACATT 60.295 38.462 0.00 0.00 38.39 2.71
361 362 7.094506 GGCAGCATCATATTCTCATGAACATTA 60.095 37.037 0.00 0.00 38.39 1.90
362 363 7.963465 GCAGCATCATATTCTCATGAACATTAG 59.037 37.037 0.00 0.00 38.39 1.73
363 364 9.216117 CAGCATCATATTCTCATGAACATTAGA 57.784 33.333 0.00 0.00 38.39 2.10
364 365 9.788889 AGCATCATATTCTCATGAACATTAGAA 57.211 29.630 11.93 11.93 38.39 2.10
373 374 9.904198 TTCTCATGAACATTAGAATCATTACCA 57.096 29.630 0.00 0.00 31.65 3.25
374 375 9.904198 TCTCATGAACATTAGAATCATTACCAA 57.096 29.630 0.00 0.00 31.65 3.67
376 377 9.904198 TCATGAACATTAGAATCATTACCAAGA 57.096 29.630 0.00 0.00 31.65 3.02
380 381 9.490663 GAACATTAGAATCATTACCAAGAAACG 57.509 33.333 0.00 0.00 0.00 3.60
381 382 8.786826 ACATTAGAATCATTACCAAGAAACGA 57.213 30.769 0.00 0.00 0.00 3.85
382 383 9.226606 ACATTAGAATCATTACCAAGAAACGAA 57.773 29.630 0.00 0.00 0.00 3.85
404 405 8.403236 ACGAAAGTACCTGATAATTTAATTGGC 58.597 33.333 0.00 0.00 46.88 4.52
405 406 7.586300 CGAAAGTACCTGATAATTTAATTGGCG 59.414 37.037 0.00 0.00 31.35 5.69
406 407 7.875327 AAGTACCTGATAATTTAATTGGCGT 57.125 32.000 0.00 0.00 0.00 5.68
407 408 7.259290 AGTACCTGATAATTTAATTGGCGTG 57.741 36.000 0.00 0.00 0.00 5.34
408 409 4.932146 ACCTGATAATTTAATTGGCGTGC 58.068 39.130 0.00 0.00 0.00 5.34
409 410 3.974401 CCTGATAATTTAATTGGCGTGCG 59.026 43.478 0.00 0.00 0.00 5.34
410 411 3.367607 TGATAATTTAATTGGCGTGCGC 58.632 40.909 8.17 8.17 41.06 6.09
411 412 1.816370 TAATTTAATTGGCGTGCGCG 58.184 45.000 16.86 16.86 43.06 6.86
412 413 0.169230 AATTTAATTGGCGTGCGCGA 59.831 45.000 26.19 2.13 43.06 5.87
413 414 0.248054 ATTTAATTGGCGTGCGCGAG 60.248 50.000 26.19 0.19 43.06 5.03
426 427 2.208074 CGCGAGCTCGAGTAATTGG 58.792 57.895 38.74 12.46 43.02 3.16
427 428 0.525668 CGCGAGCTCGAGTAATTGGT 60.526 55.000 38.74 0.00 43.02 3.67
428 429 1.201343 GCGAGCTCGAGTAATTGGTC 58.799 55.000 38.74 13.56 43.02 4.02
429 430 1.841450 CGAGCTCGAGTAATTGGTCC 58.159 55.000 32.06 0.00 43.02 4.46
430 431 1.134367 CGAGCTCGAGTAATTGGTCCA 59.866 52.381 32.06 0.00 43.02 4.02
431 432 2.796383 CGAGCTCGAGTAATTGGTCCAG 60.796 54.545 32.06 0.00 43.02 3.86
432 433 2.166664 GAGCTCGAGTAATTGGTCCAGT 59.833 50.000 15.13 0.00 0.00 4.00
433 434 3.362706 AGCTCGAGTAATTGGTCCAGTA 58.637 45.455 15.13 0.00 0.00 2.74
434 435 3.961408 AGCTCGAGTAATTGGTCCAGTAT 59.039 43.478 15.13 0.00 0.00 2.12
435 436 5.138276 AGCTCGAGTAATTGGTCCAGTATA 58.862 41.667 15.13 0.00 0.00 1.47
436 437 5.775701 AGCTCGAGTAATTGGTCCAGTATAT 59.224 40.000 15.13 0.00 0.00 0.86
437 438 5.864474 GCTCGAGTAATTGGTCCAGTATATG 59.136 44.000 15.13 0.00 0.00 1.78
438 439 6.516860 GCTCGAGTAATTGGTCCAGTATATGT 60.517 42.308 15.13 0.00 0.00 2.29
439 440 7.356089 TCGAGTAATTGGTCCAGTATATGTT 57.644 36.000 0.00 0.00 0.00 2.71
440 441 8.467963 TCGAGTAATTGGTCCAGTATATGTTA 57.532 34.615 0.00 0.00 0.00 2.41
441 442 8.355169 TCGAGTAATTGGTCCAGTATATGTTAC 58.645 37.037 0.00 0.00 0.00 2.50
442 443 8.139350 CGAGTAATTGGTCCAGTATATGTTACA 58.861 37.037 0.00 0.00 0.00 2.41
443 444 9.477484 GAGTAATTGGTCCAGTATATGTTACAG 57.523 37.037 0.00 0.00 0.00 2.74
444 445 8.989131 AGTAATTGGTCCAGTATATGTTACAGT 58.011 33.333 0.00 0.00 0.00 3.55
447 448 6.971726 TGGTCCAGTATATGTTACAGTAGG 57.028 41.667 0.00 0.00 0.00 3.18
448 449 5.836898 TGGTCCAGTATATGTTACAGTAGGG 59.163 44.000 0.00 0.00 0.00 3.53
449 450 5.245526 GGTCCAGTATATGTTACAGTAGGGG 59.754 48.000 0.00 0.00 0.00 4.79
450 451 4.836736 TCCAGTATATGTTACAGTAGGGGC 59.163 45.833 0.00 0.00 0.00 5.80
451 452 4.838986 CCAGTATATGTTACAGTAGGGGCT 59.161 45.833 0.00 0.00 0.00 5.19
452 453 5.279506 CCAGTATATGTTACAGTAGGGGCTG 60.280 48.000 0.00 0.00 41.92 4.85
457 458 2.207189 ACAGTAGGGGCTGTGGGT 59.793 61.111 0.00 0.00 46.72 4.51
458 459 2.224159 ACAGTAGGGGCTGTGGGTG 61.224 63.158 0.00 0.00 46.72 4.61
459 460 2.207189 AGTAGGGGCTGTGGGTGT 59.793 61.111 0.00 0.00 0.00 4.16
460 461 0.907704 CAGTAGGGGCTGTGGGTGTA 60.908 60.000 0.00 0.00 0.00 2.90
461 462 0.178885 AGTAGGGGCTGTGGGTGTAA 60.179 55.000 0.00 0.00 0.00 2.41
462 463 0.035725 GTAGGGGCTGTGGGTGTAAC 60.036 60.000 0.00 0.00 0.00 2.50
463 464 0.474079 TAGGGGCTGTGGGTGTAACA 60.474 55.000 0.00 0.00 39.98 2.41
464 465 1.151908 GGGGCTGTGGGTGTAACAA 59.848 57.895 0.00 0.00 39.98 2.83
465 466 0.251608 GGGGCTGTGGGTGTAACAAT 60.252 55.000 0.00 0.00 39.98 2.71
466 467 0.887933 GGGCTGTGGGTGTAACAATG 59.112 55.000 0.00 0.00 39.98 2.82
467 468 0.887933 GGCTGTGGGTGTAACAATGG 59.112 55.000 0.00 0.00 39.98 3.16
468 469 1.616159 GCTGTGGGTGTAACAATGGT 58.384 50.000 0.00 0.00 39.98 3.55
469 470 2.553466 GGCTGTGGGTGTAACAATGGTA 60.553 50.000 0.00 0.00 39.98 3.25
470 471 3.352648 GCTGTGGGTGTAACAATGGTAT 58.647 45.455 0.00 0.00 39.98 2.73
471 472 3.761752 GCTGTGGGTGTAACAATGGTATT 59.238 43.478 0.00 0.00 39.98 1.89
472 473 4.380444 GCTGTGGGTGTAACAATGGTATTG 60.380 45.833 0.28 0.28 39.98 1.90
473 474 4.986783 TGTGGGTGTAACAATGGTATTGA 58.013 39.130 8.41 0.00 39.98 2.57
474 475 5.575157 TGTGGGTGTAACAATGGTATTGAT 58.425 37.500 8.41 0.00 39.98 2.57
475 476 5.417266 TGTGGGTGTAACAATGGTATTGATG 59.583 40.000 8.41 0.00 39.98 3.07
476 477 5.417580 GTGGGTGTAACAATGGTATTGATGT 59.582 40.000 8.41 0.00 39.98 3.06
477 478 5.650266 TGGGTGTAACAATGGTATTGATGTC 59.350 40.000 8.41 0.00 39.98 3.06
478 479 5.067283 GGGTGTAACAATGGTATTGATGTCC 59.933 44.000 8.41 4.55 39.98 4.02
479 480 5.885912 GGTGTAACAATGGTATTGATGTCCT 59.114 40.000 8.41 0.00 39.98 3.85
480 481 6.377146 GGTGTAACAATGGTATTGATGTCCTT 59.623 38.462 8.41 0.00 39.98 3.36
484 485 9.337396 GTAACAATGGTATTGATGTCCTTATCA 57.663 33.333 8.41 0.00 35.38 2.15
500 501 5.041287 CCTTATCACGAATTCAACTCGCTA 58.959 41.667 6.22 0.00 39.97 4.26
516 517 2.159184 TCGCTAGCTCTGTTCATCTTGG 60.159 50.000 13.93 0.00 0.00 3.61
537 538 3.585289 GGAGAGGAGGAAAGAAAGAAGGT 59.415 47.826 0.00 0.00 0.00 3.50
554 555 3.914426 AGGTGAAGATTACAAGCCGAT 57.086 42.857 0.00 0.00 0.00 4.18
575 576 0.111639 ACCCAGCCGTGTACCAATTT 59.888 50.000 0.00 0.00 0.00 1.82
591 592 5.381757 ACCAATTTGCTACCTTACACAGAA 58.618 37.500 0.00 0.00 0.00 3.02
594 595 7.147811 ACCAATTTGCTACCTTACACAGAAAAA 60.148 33.333 0.00 0.00 0.00 1.94
595 596 7.872483 CCAATTTGCTACCTTACACAGAAAAAT 59.128 33.333 0.00 0.00 0.00 1.82
632 633 1.956170 CTCACACACACCACTCGCC 60.956 63.158 0.00 0.00 0.00 5.54
633 634 3.337889 CACACACACCACTCGCCG 61.338 66.667 0.00 0.00 0.00 6.46
634 635 3.533105 ACACACACCACTCGCCGA 61.533 61.111 0.00 0.00 0.00 5.54
636 637 2.910479 ACACACCACTCGCCGAGA 60.910 61.111 22.80 0.00 33.32 4.04
692 693 2.516460 CAGCTGGCCATGCTCTCC 60.516 66.667 22.12 0.37 38.92 3.71
704 705 1.123861 TGCTCTCCAGAAGGCAGTGT 61.124 55.000 0.00 0.00 33.74 3.55
757 759 5.009110 TGAGATTTTGTAATGCCGTTGAACA 59.991 36.000 0.00 0.00 0.00 3.18
762 764 8.594881 ATTTTGTAATGCCGTTGAACATTTTA 57.405 26.923 0.00 0.00 37.63 1.52
764 766 8.420374 TTTGTAATGCCGTTGAACATTTTAAA 57.580 26.923 0.00 0.00 37.63 1.52
765 767 8.420374 TTGTAATGCCGTTGAACATTTTAAAA 57.580 26.923 2.51 2.51 37.63 1.52
788 790 7.510675 AAGAAATAGAAGTCCCTATTCCACA 57.489 36.000 0.00 0.00 38.12 4.17
793 795 9.547279 AAATAGAAGTCCCTATTCCACAAAAAT 57.453 29.630 0.00 0.00 38.12 1.82
810 812 9.100554 CCACAAAAATATATGTGTTCATGCATT 57.899 29.630 0.00 0.00 44.21 3.56
871 878 1.606025 ACCATTTGGCACGCATGGA 60.606 52.632 20.99 0.00 41.53 3.41
875 882 0.683828 ATTTGGCACGCATGGATCCA 60.684 50.000 18.88 18.88 0.00 3.41
938 945 5.527582 CCAGGAAACTTTAGTAATCCCATCG 59.472 44.000 9.72 0.00 40.21 3.84
941 948 6.822170 AGGAAACTTTAGTAATCCCATCGAAC 59.178 38.462 9.72 0.00 37.44 3.95
942 949 6.822170 GGAAACTTTAGTAATCCCATCGAACT 59.178 38.462 0.00 0.00 31.59 3.01
943 950 7.336176 GGAAACTTTAGTAATCCCATCGAACTT 59.664 37.037 0.00 0.00 31.59 2.66
944 951 7.611213 AACTTTAGTAATCCCATCGAACTTG 57.389 36.000 0.00 0.00 0.00 3.16
975 982 1.128188 GGTGGAGACCTGGAGTTGGT 61.128 60.000 0.00 0.00 39.47 3.67
976 983 1.640917 GTGGAGACCTGGAGTTGGTA 58.359 55.000 0.00 0.00 38.03 3.25
979 986 1.640917 GAGACCTGGAGTTGGTACCA 58.359 55.000 11.60 11.60 38.03 3.25
1065 1072 2.563427 GCGTTTGAGAAGCAGCCC 59.437 61.111 0.00 0.00 0.00 5.19
1095 1102 0.546507 TATGGGAGCAGGTGACACCA 60.547 55.000 26.30 4.21 41.95 4.17
1128 1135 0.976641 TCTCGGTGGTGCTCTCAATT 59.023 50.000 0.00 0.00 0.00 2.32
1134 1141 2.887152 GGTGGTGCTCTCAATTGTCTTT 59.113 45.455 5.13 0.00 0.00 2.52
1149 1156 2.565391 TGTCTTTGGCTTCGTGATCCTA 59.435 45.455 0.00 0.00 0.00 2.94
1213 1220 1.181741 AGTCAGCGTCCTCAGCTTCA 61.182 55.000 0.00 0.00 44.06 3.02
1230 1237 3.883489 GCTTCACCTTACTCAAGTGGTTT 59.117 43.478 0.00 0.00 0.00 3.27
1237 1244 2.717639 ACTCAAGTGGTTTGTCAGCT 57.282 45.000 0.00 0.00 38.01 4.24
1269 1276 2.586792 GGCCTCTCAACATCGCCT 59.413 61.111 0.00 0.00 36.65 5.52
1346 1353 2.158769 TGGCCATCACTGGTAAGCATAG 60.159 50.000 0.00 0.00 45.10 2.23
1348 1355 3.433598 GGCCATCACTGGTAAGCATAGAA 60.434 47.826 0.00 0.00 45.10 2.10
1359 1366 8.860088 ACTGGTAAGCATAGAAAACTTCAATTT 58.140 29.630 0.00 0.00 0.00 1.82
1410 1417 5.337410 CCTGTCATTCTCAAGATCAGAGTGT 60.337 44.000 13.01 3.38 34.73 3.55
1450 1458 2.094130 GGTTTCTTCTAGACCCGACCAG 60.094 54.545 0.00 0.00 0.00 4.00
1454 1462 2.025226 TCTTCTAGACCCGACCAGTGAT 60.025 50.000 0.00 0.00 0.00 3.06
1466 1474 3.306088 CGACCAGTGATTGTTGTCCTAGT 60.306 47.826 0.00 0.00 0.00 2.57
1487 1495 7.813627 CCTAGTTGTTGTCTCTAGTTTTCCTAC 59.186 40.741 0.00 0.00 32.01 3.18
1489 1497 6.040166 AGTTGTTGTCTCTAGTTTTCCTACGA 59.960 38.462 0.00 0.00 0.00 3.43
1516 1524 8.009974 AGTACGTCTTTTCTGATTTGAATTTCG 58.990 33.333 0.00 0.00 0.00 3.46
1524 1533 9.515020 TTTTCTGATTTGAATTTCGTATATGGC 57.485 29.630 0.00 0.00 0.00 4.40
1554 1563 3.556843 GGCAAGGCACCAATGTAAAACAT 60.557 43.478 0.00 0.00 41.31 2.71
1574 1583 4.771577 ACATTGCCATGTATTCTTTGTCCA 59.228 37.500 0.69 0.00 42.24 4.02
1612 2582 4.041691 ACCTTGCACAATAACCTCACTACT 59.958 41.667 0.00 0.00 0.00 2.57
1613 2583 4.393062 CCTTGCACAATAACCTCACTACTG 59.607 45.833 0.00 0.00 0.00 2.74
1614 2584 4.882842 TGCACAATAACCTCACTACTGA 57.117 40.909 0.00 0.00 0.00 3.41
1616 2586 4.039852 TGCACAATAACCTCACTACTGACA 59.960 41.667 0.00 0.00 0.00 3.58
1617 2587 4.389077 GCACAATAACCTCACTACTGACAC 59.611 45.833 0.00 0.00 0.00 3.67
1618 2588 4.621460 CACAATAACCTCACTACTGACACG 59.379 45.833 0.00 0.00 0.00 4.49
1732 2704 6.214205 ACATCAATTTAAGCTGCAAAAACG 57.786 33.333 1.02 0.00 0.00 3.60
1843 2815 8.678593 TTAAACCCCCAAATTTTATTCAACAC 57.321 30.769 0.00 0.00 0.00 3.32
1958 2930 3.584848 AGCACCAACCAAATAGAGAGTCT 59.415 43.478 0.00 0.00 0.00 3.24
1977 2949 2.328099 GGGAAAGCACACGAGGCAG 61.328 63.158 0.00 0.00 0.00 4.85
1996 2968 3.211865 CAGACATGCCAGCATAGTTGAT 58.788 45.455 4.52 0.00 34.91 2.57
2005 2977 2.610833 CAGCATAGTTGATGACACGCAT 59.389 45.455 0.00 0.00 41.87 4.73
2048 3020 3.977244 CACGCAGGCCAACAACCC 61.977 66.667 5.01 0.00 0.00 4.11
2088 3060 5.894393 TGATCTACTAAGACTAAGCTTGGCT 59.106 40.000 9.86 3.66 35.69 4.75
2102 3074 2.322161 CTTGGCTGTCAGAATTTTGCG 58.678 47.619 3.32 0.00 0.00 4.85
2120 3092 0.685097 CGGAGAAAGGGAGACAACCA 59.315 55.000 0.00 0.00 0.00 3.67
2127 3099 0.178990 AGGGAGACAACCAAAGCACC 60.179 55.000 0.00 0.00 0.00 5.01
2143 3115 1.666888 GCACCAACTTTCGCAATCAGG 60.667 52.381 0.00 0.00 0.00 3.86
2149 3121 3.340814 ACTTTCGCAATCAGGACATCT 57.659 42.857 0.00 0.00 0.00 2.90
2178 3150 3.448660 TCATGATCCACGACTTCAGTCAT 59.551 43.478 7.71 0.00 44.99 3.06
2183 3155 3.571571 TCCACGACTTCAGTCATTAACG 58.428 45.455 7.71 0.00 44.99 3.18
2185 3157 3.739300 CCACGACTTCAGTCATTAACGTT 59.261 43.478 5.88 5.88 44.99 3.99
2224 3525 7.343691 ACAAACACATTTTAAACATGCAATCG 58.656 30.769 0.00 0.00 0.00 3.34
2238 3539 1.985684 GCAATCGGCAAGTTTGTTAGC 59.014 47.619 0.00 0.00 43.97 3.09
2242 3543 3.347958 TCGGCAAGTTTGTTAGCAAAG 57.652 42.857 4.84 0.00 44.27 2.77
2261 3562 8.000780 AGCAAAGATATCTTCAATGGTAAACC 57.999 34.615 18.19 0.68 34.61 3.27
2275 3576 2.299867 GGTAAACCTGTTCCTGGTCGTA 59.700 50.000 0.00 0.00 34.63 3.43
2290 3591 1.479323 GTCGTACATAGGGACCAGCAA 59.521 52.381 0.00 0.00 0.00 3.91
2292 3593 2.568062 TCGTACATAGGGACCAGCAAAA 59.432 45.455 0.00 0.00 0.00 2.44
2317 3619 2.956333 AGCAAACCCCAACTAGAACAAC 59.044 45.455 0.00 0.00 0.00 3.32
2404 3706 1.913419 GACACCCCCAACCAAGATCTA 59.087 52.381 0.00 0.00 0.00 1.98
2409 3711 2.310538 CCCCAACCAAGATCTAATGCC 58.689 52.381 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.171442 ACCACTACTAGGGAAAGGGCTATA 59.829 45.833 0.00 0.00 0.00 1.31
1 2 3.051264 ACCACTACTAGGGAAAGGGCTAT 60.051 47.826 0.00 0.00 0.00 2.97
2 3 2.316982 ACCACTACTAGGGAAAGGGCTA 59.683 50.000 0.00 0.00 0.00 3.93
3 4 1.080666 ACCACTACTAGGGAAAGGGCT 59.919 52.381 0.00 0.00 0.00 5.19
4 5 1.581223 ACCACTACTAGGGAAAGGGC 58.419 55.000 0.00 0.00 0.00 5.19
5 6 3.054582 GGAAACCACTACTAGGGAAAGGG 60.055 52.174 0.00 0.00 0.00 3.95
6 7 4.217836 GGAAACCACTACTAGGGAAAGG 57.782 50.000 0.00 0.00 0.00 3.11
22 23 1.002773 AGTCCGTATGTGTGGGGAAAC 59.997 52.381 0.00 0.00 0.00 2.78
23 24 1.276989 GAGTCCGTATGTGTGGGGAAA 59.723 52.381 0.00 0.00 0.00 3.13
24 25 0.899720 GAGTCCGTATGTGTGGGGAA 59.100 55.000 0.00 0.00 0.00 3.97
25 26 0.040646 AGAGTCCGTATGTGTGGGGA 59.959 55.000 0.00 0.00 0.00 4.81
26 27 1.771565 TAGAGTCCGTATGTGTGGGG 58.228 55.000 0.00 0.00 0.00 4.96
27 28 3.880047 TTTAGAGTCCGTATGTGTGGG 57.120 47.619 0.00 0.00 0.00 4.61
28 29 4.992319 TGTTTTTAGAGTCCGTATGTGTGG 59.008 41.667 0.00 0.00 0.00 4.17
29 30 5.389516 GCTGTTTTTAGAGTCCGTATGTGTG 60.390 44.000 0.00 0.00 0.00 3.82
30 31 4.689345 GCTGTTTTTAGAGTCCGTATGTGT 59.311 41.667 0.00 0.00 0.00 3.72
31 32 4.092968 GGCTGTTTTTAGAGTCCGTATGTG 59.907 45.833 0.00 0.00 0.00 3.21
32 33 4.020485 AGGCTGTTTTTAGAGTCCGTATGT 60.020 41.667 0.00 0.00 0.00 2.29
33 34 4.504858 AGGCTGTTTTTAGAGTCCGTATG 58.495 43.478 0.00 0.00 0.00 2.39
34 35 4.820894 AGGCTGTTTTTAGAGTCCGTAT 57.179 40.909 0.00 0.00 0.00 3.06
35 36 5.927281 ATAGGCTGTTTTTAGAGTCCGTA 57.073 39.130 0.00 0.00 0.00 4.02
36 37 4.820894 ATAGGCTGTTTTTAGAGTCCGT 57.179 40.909 0.00 0.00 0.00 4.69
37 38 5.903810 AGTATAGGCTGTTTTTAGAGTCCG 58.096 41.667 0.00 0.00 0.00 4.79
38 39 9.262358 CATAAGTATAGGCTGTTTTTAGAGTCC 57.738 37.037 0.00 0.00 0.00 3.85
39 40 9.819267 ACATAAGTATAGGCTGTTTTTAGAGTC 57.181 33.333 0.00 0.00 0.00 3.36
46 47 9.826574 TCGAAATACATAAGTATAGGCTGTTTT 57.173 29.630 0.00 0.00 40.00 2.43
47 48 9.826574 TTCGAAATACATAAGTATAGGCTGTTT 57.173 29.630 0.00 0.00 40.00 2.83
48 49 9.826574 TTTCGAAATACATAAGTATAGGCTGTT 57.173 29.630 6.47 0.00 40.00 3.16
49 50 9.998106 ATTTCGAAATACATAAGTATAGGCTGT 57.002 29.630 21.55 0.00 40.00 4.40
58 59 8.349983 GCCCATGTAATTTCGAAATACATAAGT 58.650 33.333 27.01 15.29 31.06 2.24
59 60 7.807907 GGCCCATGTAATTTCGAAATACATAAG 59.192 37.037 27.01 23.43 31.06 1.73
60 61 7.504238 AGGCCCATGTAATTTCGAAATACATAA 59.496 33.333 27.01 14.83 31.06 1.90
61 62 7.001674 AGGCCCATGTAATTTCGAAATACATA 58.998 34.615 27.01 17.85 31.06 2.29
62 63 5.833131 AGGCCCATGTAATTTCGAAATACAT 59.167 36.000 22.99 24.02 32.23 2.29
63 64 5.067153 CAGGCCCATGTAATTTCGAAATACA 59.933 40.000 22.99 23.12 0.00 2.29
64 65 5.519722 CAGGCCCATGTAATTTCGAAATAC 58.480 41.667 22.99 19.19 0.00 1.89
65 66 4.037446 GCAGGCCCATGTAATTTCGAAATA 59.963 41.667 22.99 8.95 0.00 1.40
66 67 3.181476 GCAGGCCCATGTAATTTCGAAAT 60.181 43.478 17.60 17.60 0.00 2.17
67 68 2.165437 GCAGGCCCATGTAATTTCGAAA 59.835 45.455 13.91 13.91 0.00 3.46
68 69 1.748493 GCAGGCCCATGTAATTTCGAA 59.252 47.619 0.00 0.00 0.00 3.71
69 70 1.388547 GCAGGCCCATGTAATTTCGA 58.611 50.000 0.00 0.00 0.00 3.71
70 71 0.385390 GGCAGGCCCATGTAATTTCG 59.615 55.000 0.00 0.00 0.00 3.46
82 83 1.963515 CACCTTATTATTGGGCAGGCC 59.036 52.381 5.91 5.91 0.00 5.19
83 84 2.944129 TCACCTTATTATTGGGCAGGC 58.056 47.619 0.00 0.00 0.00 4.85
84 85 4.536765 ACTTCACCTTATTATTGGGCAGG 58.463 43.478 0.00 0.00 0.00 4.85
85 86 5.239525 GCTACTTCACCTTATTATTGGGCAG 59.760 44.000 0.00 0.00 0.00 4.85
86 87 5.130350 GCTACTTCACCTTATTATTGGGCA 58.870 41.667 0.00 0.00 0.00 5.36
87 88 5.008712 GTGCTACTTCACCTTATTATTGGGC 59.991 44.000 0.00 0.00 0.00 5.36
88 89 6.619801 GTGCTACTTCACCTTATTATTGGG 57.380 41.667 0.00 0.00 0.00 4.12
100 101 4.342665 AGGCTATTCTAGGTGCTACTTCAC 59.657 45.833 0.00 0.00 36.28 3.18
101 102 4.547671 AGGCTATTCTAGGTGCTACTTCA 58.452 43.478 0.00 0.00 0.00 3.02
102 103 4.830600 AGAGGCTATTCTAGGTGCTACTTC 59.169 45.833 0.00 0.00 0.00 3.01
103 104 4.586841 CAGAGGCTATTCTAGGTGCTACTT 59.413 45.833 0.00 0.00 0.00 2.24
104 105 4.148838 CAGAGGCTATTCTAGGTGCTACT 58.851 47.826 0.00 0.00 0.00 2.57
105 106 3.257127 CCAGAGGCTATTCTAGGTGCTAC 59.743 52.174 0.00 0.00 0.00 3.58
106 107 3.140332 TCCAGAGGCTATTCTAGGTGCTA 59.860 47.826 0.00 0.00 0.00 3.49
107 108 2.091055 TCCAGAGGCTATTCTAGGTGCT 60.091 50.000 0.00 0.00 0.00 4.40
108 109 2.320781 TCCAGAGGCTATTCTAGGTGC 58.679 52.381 0.00 0.00 0.00 5.01
109 110 4.155709 TCATCCAGAGGCTATTCTAGGTG 58.844 47.826 0.00 0.00 0.00 4.00
110 111 4.107149 TCTCATCCAGAGGCTATTCTAGGT 59.893 45.833 0.00 0.00 44.81 3.08
111 112 4.671831 TCTCATCCAGAGGCTATTCTAGG 58.328 47.826 0.00 0.00 44.81 3.02
112 113 6.855763 AATCTCATCCAGAGGCTATTCTAG 57.144 41.667 0.00 0.00 44.81 2.43
113 114 8.756927 CATAAATCTCATCCAGAGGCTATTCTA 58.243 37.037 0.00 0.00 44.81 2.10
114 115 7.457218 TCATAAATCTCATCCAGAGGCTATTCT 59.543 37.037 0.00 0.00 44.81 2.40
115 116 7.619050 TCATAAATCTCATCCAGAGGCTATTC 58.381 38.462 0.00 0.00 44.81 1.75
116 117 7.565190 TCATAAATCTCATCCAGAGGCTATT 57.435 36.000 0.00 0.00 44.81 1.73
117 118 7.237263 ACTTCATAAATCTCATCCAGAGGCTAT 59.763 37.037 0.00 0.00 44.81 2.97
118 119 6.556495 ACTTCATAAATCTCATCCAGAGGCTA 59.444 38.462 0.00 0.00 44.81 3.93
119 120 5.369110 ACTTCATAAATCTCATCCAGAGGCT 59.631 40.000 0.00 0.00 44.81 4.58
120 121 5.469421 CACTTCATAAATCTCATCCAGAGGC 59.531 44.000 0.00 0.00 44.81 4.70
121 122 5.996513 CCACTTCATAAATCTCATCCAGAGG 59.003 44.000 0.00 0.00 44.81 3.69
122 123 5.469421 GCCACTTCATAAATCTCATCCAGAG 59.531 44.000 0.00 0.00 46.14 3.35
123 124 5.371526 GCCACTTCATAAATCTCATCCAGA 58.628 41.667 0.00 0.00 34.78 3.86
124 125 4.212847 CGCCACTTCATAAATCTCATCCAG 59.787 45.833 0.00 0.00 0.00 3.86
125 126 4.129380 CGCCACTTCATAAATCTCATCCA 58.871 43.478 0.00 0.00 0.00 3.41
126 127 4.130118 ACGCCACTTCATAAATCTCATCC 58.870 43.478 0.00 0.00 0.00 3.51
127 128 5.053145 AGACGCCACTTCATAAATCTCATC 58.947 41.667 0.00 0.00 0.00 2.92
128 129 5.028549 AGACGCCACTTCATAAATCTCAT 57.971 39.130 0.00 0.00 0.00 2.90
129 130 4.471904 AGACGCCACTTCATAAATCTCA 57.528 40.909 0.00 0.00 0.00 3.27
130 131 4.631813 ACAAGACGCCACTTCATAAATCTC 59.368 41.667 0.00 0.00 0.00 2.75
131 132 4.579869 ACAAGACGCCACTTCATAAATCT 58.420 39.130 0.00 0.00 0.00 2.40
132 133 4.946784 ACAAGACGCCACTTCATAAATC 57.053 40.909 0.00 0.00 0.00 2.17
133 134 8.677148 AATATACAAGACGCCACTTCATAAAT 57.323 30.769 0.00 0.00 0.00 1.40
134 135 8.500753 AAATATACAAGACGCCACTTCATAAA 57.499 30.769 0.00 0.00 0.00 1.40
135 136 9.256477 CTAAATATACAAGACGCCACTTCATAA 57.744 33.333 0.00 0.00 0.00 1.90
136 137 8.418662 ACTAAATATACAAGACGCCACTTCATA 58.581 33.333 0.00 0.00 0.00 2.15
137 138 7.272978 ACTAAATATACAAGACGCCACTTCAT 58.727 34.615 0.00 0.00 0.00 2.57
138 139 6.636705 ACTAAATATACAAGACGCCACTTCA 58.363 36.000 0.00 0.00 0.00 3.02
139 140 6.200475 GGACTAAATATACAAGACGCCACTTC 59.800 42.308 0.00 0.00 0.00 3.01
140 141 6.047231 GGACTAAATATACAAGACGCCACTT 58.953 40.000 0.00 0.00 0.00 3.16
141 142 5.128171 TGGACTAAATATACAAGACGCCACT 59.872 40.000 0.00 0.00 0.00 4.00
142 143 5.353938 TGGACTAAATATACAAGACGCCAC 58.646 41.667 0.00 0.00 0.00 5.01
143 144 5.601583 TGGACTAAATATACAAGACGCCA 57.398 39.130 0.00 0.00 0.00 5.69
144 145 5.465724 CCTTGGACTAAATATACAAGACGCC 59.534 44.000 0.00 0.00 40.60 5.68
145 146 5.050295 GCCTTGGACTAAATATACAAGACGC 60.050 44.000 0.00 0.00 40.60 5.19
146 147 6.281405 AGCCTTGGACTAAATATACAAGACG 58.719 40.000 0.00 0.00 40.60 4.18
147 148 7.769044 TGAAGCCTTGGACTAAATATACAAGAC 59.231 37.037 0.00 0.00 40.60 3.01
148 149 7.857456 TGAAGCCTTGGACTAAATATACAAGA 58.143 34.615 0.00 0.00 40.60 3.02
149 150 8.562892 CATGAAGCCTTGGACTAAATATACAAG 58.437 37.037 0.00 0.00 38.52 3.16
150 151 7.013274 GCATGAAGCCTTGGACTAAATATACAA 59.987 37.037 0.00 0.00 37.23 2.41
151 152 6.486657 GCATGAAGCCTTGGACTAAATATACA 59.513 38.462 0.00 0.00 37.23 2.29
152 153 6.486657 TGCATGAAGCCTTGGACTAAATATAC 59.513 38.462 0.00 0.00 44.83 1.47
153 154 6.486657 GTGCATGAAGCCTTGGACTAAATATA 59.513 38.462 0.00 0.00 44.83 0.86
154 155 5.300286 GTGCATGAAGCCTTGGACTAAATAT 59.700 40.000 0.00 0.00 44.83 1.28
155 156 4.640201 GTGCATGAAGCCTTGGACTAAATA 59.360 41.667 0.00 0.00 44.83 1.40
156 157 3.445096 GTGCATGAAGCCTTGGACTAAAT 59.555 43.478 0.00 0.00 44.83 1.40
157 158 2.819608 GTGCATGAAGCCTTGGACTAAA 59.180 45.455 0.00 0.00 44.83 1.85
158 159 2.040278 AGTGCATGAAGCCTTGGACTAA 59.960 45.455 0.00 0.00 43.65 2.24
159 160 1.630369 AGTGCATGAAGCCTTGGACTA 59.370 47.619 0.00 0.00 43.65 2.59
160 161 0.403271 AGTGCATGAAGCCTTGGACT 59.597 50.000 0.00 0.00 44.83 3.85
161 162 0.807496 GAGTGCATGAAGCCTTGGAC 59.193 55.000 0.00 0.00 44.83 4.02
162 163 0.401356 TGAGTGCATGAAGCCTTGGA 59.599 50.000 0.00 0.00 44.83 3.53
163 164 1.471119 ATGAGTGCATGAAGCCTTGG 58.529 50.000 0.00 0.00 44.83 3.61
164 165 4.337274 TCATAATGAGTGCATGAAGCCTTG 59.663 41.667 0.00 0.00 44.83 3.61
165 166 4.529897 TCATAATGAGTGCATGAAGCCTT 58.470 39.130 0.00 0.00 44.83 4.35
166 167 4.160642 TCATAATGAGTGCATGAAGCCT 57.839 40.909 0.00 0.00 44.83 4.58
167 168 4.321008 CCATCATAATGAGTGCATGAAGCC 60.321 45.833 0.00 0.00 37.49 4.35
168 169 4.795268 CCATCATAATGAGTGCATGAAGC 58.205 43.478 0.00 0.00 38.32 3.86
169 170 4.519350 AGCCATCATAATGAGTGCATGAAG 59.481 41.667 0.00 0.00 34.61 3.02
170 171 4.466827 AGCCATCATAATGAGTGCATGAA 58.533 39.130 0.00 0.00 34.61 2.57
171 172 4.094830 AGCCATCATAATGAGTGCATGA 57.905 40.909 0.00 0.00 34.61 3.07
172 173 4.277423 TGAAGCCATCATAATGAGTGCATG 59.723 41.667 0.00 0.00 34.61 4.06
173 174 4.466827 TGAAGCCATCATAATGAGTGCAT 58.533 39.130 0.00 0.00 34.61 3.96
174 175 3.888583 TGAAGCCATCATAATGAGTGCA 58.111 40.909 0.00 0.00 34.61 4.57
175 176 4.906065 TTGAAGCCATCATAATGAGTGC 57.094 40.909 0.00 0.00 38.03 4.40
176 177 6.446781 ACTTTGAAGCCATCATAATGAGTG 57.553 37.500 0.00 0.00 38.03 3.51
177 178 5.591877 GGACTTTGAAGCCATCATAATGAGT 59.408 40.000 0.00 0.00 38.03 3.41
178 179 5.826737 AGGACTTTGAAGCCATCATAATGAG 59.173 40.000 6.87 0.00 38.03 2.90
179 180 5.759059 AGGACTTTGAAGCCATCATAATGA 58.241 37.500 6.87 0.00 38.03 2.57
180 181 5.591472 TGAGGACTTTGAAGCCATCATAATG 59.409 40.000 6.87 0.00 38.03 1.90
181 182 5.759059 TGAGGACTTTGAAGCCATCATAAT 58.241 37.500 6.87 0.00 38.03 1.28
182 183 5.178096 TGAGGACTTTGAAGCCATCATAA 57.822 39.130 6.87 0.00 38.03 1.90
183 184 4.842531 TGAGGACTTTGAAGCCATCATA 57.157 40.909 6.87 0.00 38.03 2.15
184 185 3.726557 TGAGGACTTTGAAGCCATCAT 57.273 42.857 6.87 0.00 38.03 2.45
185 186 3.507162 TTGAGGACTTTGAAGCCATCA 57.493 42.857 6.87 0.00 35.85 3.07
186 187 4.460382 TGAATTGAGGACTTTGAAGCCATC 59.540 41.667 6.87 0.00 0.00 3.51
187 188 4.410099 TGAATTGAGGACTTTGAAGCCAT 58.590 39.130 6.87 0.00 0.00 4.40
188 189 3.831323 TGAATTGAGGACTTTGAAGCCA 58.169 40.909 6.87 0.00 0.00 4.75
189 190 4.460382 TGATGAATTGAGGACTTTGAAGCC 59.540 41.667 0.00 0.00 0.00 4.35
190 191 5.182760 AGTGATGAATTGAGGACTTTGAAGC 59.817 40.000 0.00 0.00 0.00 3.86
191 192 6.814506 AGTGATGAATTGAGGACTTTGAAG 57.185 37.500 0.00 0.00 0.00 3.02
192 193 6.547141 ACAAGTGATGAATTGAGGACTTTGAA 59.453 34.615 0.00 0.00 0.00 2.69
193 194 6.064060 ACAAGTGATGAATTGAGGACTTTGA 58.936 36.000 0.00 0.00 0.00 2.69
194 195 6.323203 ACAAGTGATGAATTGAGGACTTTG 57.677 37.500 0.00 0.00 0.00 2.77
195 196 7.721399 AGTTACAAGTGATGAATTGAGGACTTT 59.279 33.333 0.00 0.00 0.00 2.66
196 197 7.227156 AGTTACAAGTGATGAATTGAGGACTT 58.773 34.615 0.00 0.00 0.00 3.01
197 198 6.773638 AGTTACAAGTGATGAATTGAGGACT 58.226 36.000 0.00 0.00 0.00 3.85
198 199 6.092807 GGAGTTACAAGTGATGAATTGAGGAC 59.907 42.308 0.00 0.00 0.00 3.85
199 200 6.173339 GGAGTTACAAGTGATGAATTGAGGA 58.827 40.000 0.00 0.00 0.00 3.71
200 201 5.063944 CGGAGTTACAAGTGATGAATTGAGG 59.936 44.000 0.00 0.00 0.00 3.86
201 202 5.639506 ACGGAGTTACAAGTGATGAATTGAG 59.360 40.000 0.00 0.00 37.78 3.02
202 203 5.547465 ACGGAGTTACAAGTGATGAATTGA 58.453 37.500 0.00 0.00 37.78 2.57
203 204 5.862924 ACGGAGTTACAAGTGATGAATTG 57.137 39.130 0.00 0.00 37.78 2.32
220 221 1.523758 CAAGGGGAACAAGAACGGAG 58.476 55.000 0.00 0.00 0.00 4.63
221 222 0.536460 GCAAGGGGAACAAGAACGGA 60.536 55.000 0.00 0.00 0.00 4.69
222 223 1.852067 CGCAAGGGGAACAAGAACGG 61.852 60.000 0.00 0.00 0.00 4.44
223 224 1.574428 CGCAAGGGGAACAAGAACG 59.426 57.895 0.00 0.00 0.00 3.95
224 225 1.285950 GCGCAAGGGGAACAAGAAC 59.714 57.895 0.30 0.00 38.28 3.01
225 226 0.539438 ATGCGCAAGGGGAACAAGAA 60.539 50.000 17.11 0.00 38.28 2.52
226 227 1.074775 ATGCGCAAGGGGAACAAGA 59.925 52.632 17.11 0.00 38.28 3.02
227 228 1.213537 CATGCGCAAGGGGAACAAG 59.786 57.895 17.11 0.00 38.28 3.16
228 229 2.929903 GCATGCGCAAGGGGAACAA 61.930 57.895 17.11 0.00 38.36 2.83
229 230 3.372730 GCATGCGCAAGGGGAACA 61.373 61.111 17.11 0.00 38.36 3.18
230 231 4.133796 GGCATGCGCAAGGGGAAC 62.134 66.667 17.11 0.00 41.24 3.62
235 236 3.459378 GATGACGGCATGCGCAAGG 62.459 63.158 17.11 11.64 41.24 3.61
236 237 2.023741 GATGACGGCATGCGCAAG 59.976 61.111 17.11 12.48 41.24 4.01
237 238 2.436469 AGATGACGGCATGCGCAA 60.436 55.556 17.11 0.00 41.24 4.85
238 239 2.891936 GAGATGACGGCATGCGCA 60.892 61.111 14.96 14.96 41.24 6.09
239 240 3.643978 GGAGATGACGGCATGCGC 61.644 66.667 9.52 0.00 34.11 6.09
240 241 1.596203 ATGGAGATGACGGCATGCG 60.596 57.895 9.52 9.76 34.11 4.73
241 242 1.947013 CATGGAGATGACGGCATGC 59.053 57.895 9.52 9.90 34.11 4.06
242 243 0.534427 AGCATGGAGATGACGGCATG 60.534 55.000 9.52 0.00 34.11 4.06
243 244 0.182061 AAGCATGGAGATGACGGCAT 59.818 50.000 1.48 1.48 37.47 4.40
244 245 0.745486 CAAGCATGGAGATGACGGCA 60.745 55.000 0.00 0.00 0.00 5.69
245 246 2.020131 CAAGCATGGAGATGACGGC 58.980 57.895 0.00 0.00 0.00 5.68
262 263 4.536090 AGGATGAACATTGGAGTAAGACCA 59.464 41.667 0.00 0.00 35.47 4.02
263 264 5.104259 AGGATGAACATTGGAGTAAGACC 57.896 43.478 0.00 0.00 0.00 3.85
264 265 6.410540 AGAAGGATGAACATTGGAGTAAGAC 58.589 40.000 0.00 0.00 0.00 3.01
265 266 6.352222 GGAGAAGGATGAACATTGGAGTAAGA 60.352 42.308 0.00 0.00 0.00 2.10
266 267 5.819901 GGAGAAGGATGAACATTGGAGTAAG 59.180 44.000 0.00 0.00 0.00 2.34
267 268 5.250543 TGGAGAAGGATGAACATTGGAGTAA 59.749 40.000 0.00 0.00 0.00 2.24
268 269 4.782691 TGGAGAAGGATGAACATTGGAGTA 59.217 41.667 0.00 0.00 0.00 2.59
269 270 3.588842 TGGAGAAGGATGAACATTGGAGT 59.411 43.478 0.00 0.00 0.00 3.85
270 271 4.226427 TGGAGAAGGATGAACATTGGAG 57.774 45.455 0.00 0.00 0.00 3.86
271 272 4.592942 CTTGGAGAAGGATGAACATTGGA 58.407 43.478 0.00 0.00 0.00 3.53
272 273 3.129988 GCTTGGAGAAGGATGAACATTGG 59.870 47.826 0.00 0.00 0.00 3.16
273 274 4.015084 AGCTTGGAGAAGGATGAACATTG 58.985 43.478 0.00 0.00 0.00 2.82
274 275 4.313020 AGCTTGGAGAAGGATGAACATT 57.687 40.909 0.00 0.00 0.00 2.71
275 276 4.141528 CCTAGCTTGGAGAAGGATGAACAT 60.142 45.833 8.73 0.00 0.00 2.71
276 277 3.198635 CCTAGCTTGGAGAAGGATGAACA 59.801 47.826 8.73 0.00 0.00 3.18
277 278 3.802866 CCTAGCTTGGAGAAGGATGAAC 58.197 50.000 8.73 0.00 0.00 3.18
278 279 2.171448 GCCTAGCTTGGAGAAGGATGAA 59.829 50.000 19.07 0.00 0.00 2.57
279 280 1.765314 GCCTAGCTTGGAGAAGGATGA 59.235 52.381 19.07 0.00 0.00 2.92
280 281 1.202746 GGCCTAGCTTGGAGAAGGATG 60.203 57.143 19.07 0.00 0.00 3.51
281 282 1.135960 GGCCTAGCTTGGAGAAGGAT 58.864 55.000 19.07 0.00 0.00 3.24
282 283 0.983378 GGGCCTAGCTTGGAGAAGGA 60.983 60.000 19.07 0.00 0.00 3.36
283 284 0.985490 AGGGCCTAGCTTGGAGAAGG 60.985 60.000 19.07 5.95 0.00 3.46
284 285 0.915364 AAGGGCCTAGCTTGGAGAAG 59.085 55.000 19.07 0.00 0.00 2.85
285 286 0.912486 GAAGGGCCTAGCTTGGAGAA 59.088 55.000 19.07 0.00 0.00 2.87
286 287 0.252696 TGAAGGGCCTAGCTTGGAGA 60.253 55.000 19.07 0.00 0.00 3.71
287 288 0.842635 ATGAAGGGCCTAGCTTGGAG 59.157 55.000 19.07 0.00 0.00 3.86
288 289 1.298953 AATGAAGGGCCTAGCTTGGA 58.701 50.000 19.07 0.00 0.00 3.53
289 290 1.753073 CAAATGAAGGGCCTAGCTTGG 59.247 52.381 6.41 10.15 0.00 3.61
290 291 2.450476 ACAAATGAAGGGCCTAGCTTG 58.550 47.619 6.41 11.03 0.00 4.01
291 292 2.907458 ACAAATGAAGGGCCTAGCTT 57.093 45.000 6.41 0.00 0.00 3.74
292 293 3.891049 CTTACAAATGAAGGGCCTAGCT 58.109 45.455 6.41 0.00 0.00 3.32
293 294 2.359214 GCTTACAAATGAAGGGCCTAGC 59.641 50.000 6.41 4.69 0.00 3.42
294 295 3.620488 TGCTTACAAATGAAGGGCCTAG 58.380 45.455 6.41 0.00 0.00 3.02
295 296 3.730215 TGCTTACAAATGAAGGGCCTA 57.270 42.857 6.41 0.00 0.00 3.93
296 297 2.603075 TGCTTACAAATGAAGGGCCT 57.397 45.000 0.00 0.00 0.00 5.19
297 298 3.676291 TTTGCTTACAAATGAAGGGCC 57.324 42.857 0.00 0.00 40.84 5.80
298 299 4.376146 TGTTTTGCTTACAAATGAAGGGC 58.624 39.130 0.00 0.00 44.96 5.19
299 300 6.917217 TTTGTTTTGCTTACAAATGAAGGG 57.083 33.333 7.27 0.00 44.96 3.95
324 325 4.595762 ATGATGCTGCCAAATTGGATAC 57.404 40.909 17.47 3.94 40.96 2.24
325 326 6.722590 AGAATATGATGCTGCCAAATTGGATA 59.277 34.615 17.47 3.06 40.96 2.59
326 327 5.542635 AGAATATGATGCTGCCAAATTGGAT 59.457 36.000 17.47 0.00 40.96 3.41
327 328 4.897076 AGAATATGATGCTGCCAAATTGGA 59.103 37.500 17.47 0.00 40.96 3.53
328 329 5.209818 AGAATATGATGCTGCCAAATTGG 57.790 39.130 7.84 7.84 41.55 3.16
329 330 5.838529 TGAGAATATGATGCTGCCAAATTG 58.161 37.500 0.00 0.00 0.00 2.32
330 331 6.266786 TCATGAGAATATGATGCTGCCAAATT 59.733 34.615 0.00 0.00 32.39 1.82
331 332 5.773176 TCATGAGAATATGATGCTGCCAAAT 59.227 36.000 0.00 0.00 32.39 2.32
332 333 5.134661 TCATGAGAATATGATGCTGCCAAA 58.865 37.500 0.00 0.00 32.39 3.28
333 334 4.721132 TCATGAGAATATGATGCTGCCAA 58.279 39.130 0.00 0.00 32.39 4.52
334 335 4.360951 TCATGAGAATATGATGCTGCCA 57.639 40.909 0.00 0.00 32.39 4.92
335 336 4.517832 TGTTCATGAGAATATGATGCTGCC 59.482 41.667 0.00 0.00 36.97 4.85
336 337 5.684550 TGTTCATGAGAATATGATGCTGC 57.315 39.130 0.00 0.00 36.97 5.25
337 338 9.216117 TCTAATGTTCATGAGAATATGATGCTG 57.784 33.333 0.00 0.00 35.97 4.41
338 339 9.788889 TTCTAATGTTCATGAGAATATGATGCT 57.211 29.630 8.14 0.00 35.97 3.79
347 348 9.904198 TGGTAATGATTCTAATGTTCATGAGAA 57.096 29.630 13.11 13.11 30.76 2.87
348 349 9.904198 TTGGTAATGATTCTAATGTTCATGAGA 57.096 29.630 0.00 0.00 30.76 3.27
350 351 9.904198 TCTTGGTAATGATTCTAATGTTCATGA 57.096 29.630 0.00 0.00 30.76 3.07
354 355 9.490663 CGTTTCTTGGTAATGATTCTAATGTTC 57.509 33.333 0.00 0.00 0.00 3.18
355 356 9.226606 TCGTTTCTTGGTAATGATTCTAATGTT 57.773 29.630 0.00 0.00 0.00 2.71
356 357 8.786826 TCGTTTCTTGGTAATGATTCTAATGT 57.213 30.769 0.00 0.00 0.00 2.71
359 360 9.280174 ACTTTCGTTTCTTGGTAATGATTCTAA 57.720 29.630 0.00 0.00 0.00 2.10
360 361 8.842358 ACTTTCGTTTCTTGGTAATGATTCTA 57.158 30.769 0.00 0.00 0.00 2.10
361 362 7.745620 ACTTTCGTTTCTTGGTAATGATTCT 57.254 32.000 0.00 0.00 0.00 2.40
362 363 7.961283 GGTACTTTCGTTTCTTGGTAATGATTC 59.039 37.037 0.00 0.00 0.00 2.52
363 364 7.664318 AGGTACTTTCGTTTCTTGGTAATGATT 59.336 33.333 0.00 0.00 27.25 2.57
364 365 7.119262 CAGGTACTTTCGTTTCTTGGTAATGAT 59.881 37.037 0.00 0.00 34.60 2.45
365 366 6.425721 CAGGTACTTTCGTTTCTTGGTAATGA 59.574 38.462 0.00 0.00 34.60 2.57
366 367 6.425721 TCAGGTACTTTCGTTTCTTGGTAATG 59.574 38.462 0.00 0.00 34.60 1.90
367 368 6.527423 TCAGGTACTTTCGTTTCTTGGTAAT 58.473 36.000 0.00 0.00 34.60 1.89
368 369 5.916318 TCAGGTACTTTCGTTTCTTGGTAA 58.084 37.500 0.00 0.00 34.60 2.85
369 370 5.534207 TCAGGTACTTTCGTTTCTTGGTA 57.466 39.130 0.00 0.00 34.60 3.25
370 371 4.411256 TCAGGTACTTTCGTTTCTTGGT 57.589 40.909 0.00 0.00 34.60 3.67
371 372 7.611213 ATTATCAGGTACTTTCGTTTCTTGG 57.389 36.000 0.00 0.00 34.60 3.61
378 379 8.403236 GCCAATTAAATTATCAGGTACTTTCGT 58.597 33.333 0.00 0.00 34.60 3.85
379 380 7.586300 CGCCAATTAAATTATCAGGTACTTTCG 59.414 37.037 0.00 0.00 34.60 3.46
380 381 8.403236 ACGCCAATTAAATTATCAGGTACTTTC 58.597 33.333 0.00 0.00 34.60 2.62
381 382 8.188139 CACGCCAATTAAATTATCAGGTACTTT 58.812 33.333 0.00 0.00 34.60 2.66
382 383 7.681065 GCACGCCAATTAAATTATCAGGTACTT 60.681 37.037 0.00 0.00 34.60 2.24
383 384 6.238648 GCACGCCAATTAAATTATCAGGTACT 60.239 38.462 0.00 0.00 43.88 2.73
384 385 5.912955 GCACGCCAATTAAATTATCAGGTAC 59.087 40.000 0.00 0.00 0.00 3.34
385 386 5.277586 CGCACGCCAATTAAATTATCAGGTA 60.278 40.000 0.00 0.00 0.00 3.08
386 387 4.497340 CGCACGCCAATTAAATTATCAGGT 60.497 41.667 0.00 0.00 0.00 4.00
387 388 3.974401 CGCACGCCAATTAAATTATCAGG 59.026 43.478 0.00 0.00 0.00 3.86
388 389 3.421888 GCGCACGCCAATTAAATTATCAG 59.578 43.478 0.30 0.00 34.56 2.90
389 390 3.367607 GCGCACGCCAATTAAATTATCA 58.632 40.909 0.30 0.00 34.56 2.15
390 391 2.400408 CGCGCACGCCAATTAAATTATC 59.600 45.455 8.75 0.00 37.98 1.75
391 392 2.032302 TCGCGCACGCCAATTAAATTAT 59.968 40.909 8.75 0.00 39.84 1.28
392 393 1.397343 TCGCGCACGCCAATTAAATTA 59.603 42.857 8.75 0.00 39.84 1.40
393 394 0.169230 TCGCGCACGCCAATTAAATT 59.831 45.000 8.75 0.00 39.84 1.82
394 395 0.248054 CTCGCGCACGCCAATTAAAT 60.248 50.000 8.75 0.00 39.84 1.40
395 396 1.133664 CTCGCGCACGCCAATTAAA 59.866 52.632 8.75 0.00 39.84 1.52
396 397 2.781957 CTCGCGCACGCCAATTAA 59.218 55.556 8.75 0.00 39.84 1.40
397 398 3.860125 GCTCGCGCACGCCAATTA 61.860 61.111 8.75 0.00 39.84 1.40
405 406 1.140407 AATTACTCGAGCTCGCGCAC 61.140 55.000 30.97 0.00 39.10 5.34
406 407 1.138883 AATTACTCGAGCTCGCGCA 59.861 52.632 30.97 13.68 39.10 6.09
407 408 1.555538 CAATTACTCGAGCTCGCGC 59.444 57.895 30.97 0.00 39.60 6.86
408 409 0.525668 ACCAATTACTCGAGCTCGCG 60.526 55.000 30.97 27.23 39.60 5.87
409 410 1.201343 GACCAATTACTCGAGCTCGC 58.799 55.000 30.97 9.23 39.60 5.03
410 411 1.134367 TGGACCAATTACTCGAGCTCG 59.866 52.381 30.03 30.03 41.45 5.03
411 412 2.166664 ACTGGACCAATTACTCGAGCTC 59.833 50.000 13.61 2.73 0.00 4.09
412 413 2.180276 ACTGGACCAATTACTCGAGCT 58.820 47.619 13.61 2.35 0.00 4.09
413 414 2.674796 ACTGGACCAATTACTCGAGC 57.325 50.000 13.61 0.00 0.00 5.03
414 415 6.982852 ACATATACTGGACCAATTACTCGAG 58.017 40.000 11.84 11.84 0.00 4.04
415 416 6.971726 ACATATACTGGACCAATTACTCGA 57.028 37.500 0.00 0.00 0.00 4.04
416 417 8.139350 TGTAACATATACTGGACCAATTACTCG 58.861 37.037 0.00 0.00 0.00 4.18
417 418 9.477484 CTGTAACATATACTGGACCAATTACTC 57.523 37.037 0.00 0.00 0.00 2.59
418 419 8.989131 ACTGTAACATATACTGGACCAATTACT 58.011 33.333 0.00 0.00 0.00 2.24
421 422 8.429641 CCTACTGTAACATATACTGGACCAATT 58.570 37.037 0.00 0.00 0.00 2.32
422 423 7.016268 CCCTACTGTAACATATACTGGACCAAT 59.984 40.741 0.00 0.00 0.00 3.16
423 424 6.325545 CCCTACTGTAACATATACTGGACCAA 59.674 42.308 0.00 0.00 0.00 3.67
424 425 5.836898 CCCTACTGTAACATATACTGGACCA 59.163 44.000 0.00 0.00 0.00 4.02
425 426 5.245526 CCCCTACTGTAACATATACTGGACC 59.754 48.000 0.00 0.00 0.00 4.46
426 427 5.279356 GCCCCTACTGTAACATATACTGGAC 60.279 48.000 0.00 0.00 0.00 4.02
427 428 4.836736 GCCCCTACTGTAACATATACTGGA 59.163 45.833 0.00 0.00 0.00 3.86
428 429 4.838986 AGCCCCTACTGTAACATATACTGG 59.161 45.833 0.00 0.00 0.00 4.00
429 430 5.784177 CAGCCCCTACTGTAACATATACTG 58.216 45.833 0.00 0.00 32.78 2.74
441 442 0.907704 TACACCCACAGCCCCTACTG 60.908 60.000 0.00 0.00 43.59 2.74
442 443 0.178885 TTACACCCACAGCCCCTACT 60.179 55.000 0.00 0.00 0.00 2.57
443 444 0.035725 GTTACACCCACAGCCCCTAC 60.036 60.000 0.00 0.00 0.00 3.18
444 445 0.474079 TGTTACACCCACAGCCCCTA 60.474 55.000 0.00 0.00 0.00 3.53
445 446 1.357272 TTGTTACACCCACAGCCCCT 61.357 55.000 0.00 0.00 0.00 4.79
446 447 0.251608 ATTGTTACACCCACAGCCCC 60.252 55.000 0.00 0.00 0.00 5.80
447 448 0.887933 CATTGTTACACCCACAGCCC 59.112 55.000 0.00 0.00 0.00 5.19
448 449 0.887933 CCATTGTTACACCCACAGCC 59.112 55.000 0.00 0.00 0.00 4.85
449 450 1.616159 ACCATTGTTACACCCACAGC 58.384 50.000 0.00 0.00 0.00 4.40
450 451 5.007034 TCAATACCATTGTTACACCCACAG 58.993 41.667 0.00 0.00 0.00 3.66
451 452 4.986783 TCAATACCATTGTTACACCCACA 58.013 39.130 0.00 0.00 0.00 4.17
452 453 5.417580 ACATCAATACCATTGTTACACCCAC 59.582 40.000 0.00 0.00 0.00 4.61
453 454 5.575157 ACATCAATACCATTGTTACACCCA 58.425 37.500 0.00 0.00 0.00 4.51
454 455 5.067283 GGACATCAATACCATTGTTACACCC 59.933 44.000 0.00 0.00 0.00 4.61
455 456 5.885912 AGGACATCAATACCATTGTTACACC 59.114 40.000 0.00 0.00 0.00 4.16
456 457 7.391148 AAGGACATCAATACCATTGTTACAC 57.609 36.000 0.00 0.00 0.00 2.90
457 458 9.337396 GATAAGGACATCAATACCATTGTTACA 57.663 33.333 0.00 0.00 0.00 2.41
458 459 9.337396 TGATAAGGACATCAATACCATTGTTAC 57.663 33.333 0.00 0.00 32.01 2.50
459 460 9.337396 GTGATAAGGACATCAATACCATTGTTA 57.663 33.333 0.00 0.00 36.71 2.41
460 461 7.012327 CGTGATAAGGACATCAATACCATTGTT 59.988 37.037 0.00 0.00 36.71 2.83
461 462 6.483307 CGTGATAAGGACATCAATACCATTGT 59.517 38.462 0.00 0.00 36.71 2.71
462 463 6.705825 TCGTGATAAGGACATCAATACCATTG 59.294 38.462 0.00 0.00 36.71 2.82
463 464 6.826668 TCGTGATAAGGACATCAATACCATT 58.173 36.000 0.00 0.00 36.71 3.16
464 465 6.419484 TCGTGATAAGGACATCAATACCAT 57.581 37.500 0.00 0.00 36.71 3.55
465 466 5.862678 TCGTGATAAGGACATCAATACCA 57.137 39.130 0.00 0.00 36.71 3.25
466 467 7.441157 TGAATTCGTGATAAGGACATCAATACC 59.559 37.037 0.04 0.00 36.71 2.73
467 468 8.365399 TGAATTCGTGATAAGGACATCAATAC 57.635 34.615 0.04 0.00 36.71 1.89
468 469 8.826710 GTTGAATTCGTGATAAGGACATCAATA 58.173 33.333 0.04 0.00 36.71 1.90
469 470 7.554118 AGTTGAATTCGTGATAAGGACATCAAT 59.446 33.333 0.04 0.00 36.71 2.57
470 471 6.878923 AGTTGAATTCGTGATAAGGACATCAA 59.121 34.615 0.04 0.00 36.71 2.57
471 472 6.406370 AGTTGAATTCGTGATAAGGACATCA 58.594 36.000 0.04 0.00 32.50 3.07
472 473 6.291849 CGAGTTGAATTCGTGATAAGGACATC 60.292 42.308 1.70 0.00 33.57 3.06
473 474 5.520288 CGAGTTGAATTCGTGATAAGGACAT 59.480 40.000 1.70 0.00 33.57 3.06
474 475 4.862574 CGAGTTGAATTCGTGATAAGGACA 59.137 41.667 1.70 0.00 33.57 4.02
475 476 4.259850 GCGAGTTGAATTCGTGATAAGGAC 60.260 45.833 11.60 0.00 40.08 3.85
476 477 3.863424 GCGAGTTGAATTCGTGATAAGGA 59.137 43.478 11.60 0.00 40.08 3.36
477 478 3.865745 AGCGAGTTGAATTCGTGATAAGG 59.134 43.478 11.60 0.00 40.08 2.69
478 479 5.331905 GCTAGCGAGTTGAATTCGTGATAAG 60.332 44.000 11.60 4.13 40.08 1.73
479 480 4.503007 GCTAGCGAGTTGAATTCGTGATAA 59.497 41.667 11.60 0.00 40.08 1.75
480 481 4.042398 GCTAGCGAGTTGAATTCGTGATA 58.958 43.478 11.60 2.69 40.08 2.15
484 485 2.164624 AGAGCTAGCGAGTTGAATTCGT 59.835 45.455 9.55 1.95 40.08 3.85
500 501 2.500910 CCTCTCCAAGATGAACAGAGCT 59.499 50.000 0.00 0.00 30.96 4.09
516 517 4.284746 TCACCTTCTTTCTTTCCTCCTCTC 59.715 45.833 0.00 0.00 0.00 3.20
537 538 3.531538 GGTCATCGGCTTGTAATCTTCA 58.468 45.455 0.00 0.00 0.00 3.02
554 555 1.485294 ATTGGTACACGGCTGGGTCA 61.485 55.000 2.03 0.00 39.29 4.02
575 576 5.178623 CGACATTTTTCTGTGTAAGGTAGCA 59.821 40.000 0.00 0.00 0.00 3.49
591 592 8.426489 TGAGGGTTATATAACTAGCGACATTTT 58.574 33.333 21.86 0.00 36.47 1.82
594 595 6.492429 TGTGAGGGTTATATAACTAGCGACAT 59.508 38.462 21.86 5.14 36.47 3.06
595 596 5.829391 TGTGAGGGTTATATAACTAGCGACA 59.171 40.000 21.86 15.57 36.47 4.35
632 633 2.159639 CCATCGACCAGATACGATCTCG 60.160 54.545 0.00 0.00 45.36 4.04
633 634 2.414824 GCCATCGACCAGATACGATCTC 60.415 54.545 0.00 0.00 45.36 2.75
634 635 1.542030 GCCATCGACCAGATACGATCT 59.458 52.381 0.00 0.00 45.36 2.75
692 693 2.996621 GTTAGCACTACACTGCCTTCTG 59.003 50.000 0.00 0.00 37.96 3.02
704 705 5.205821 TCTACCTAGCCAATGTTAGCACTA 58.794 41.667 0.00 0.00 0.00 2.74
762 764 8.390921 TGTGGAATAGGGACTTCTATTTCTTTT 58.609 33.333 0.00 0.00 39.31 2.27
764 766 7.510675 TGTGGAATAGGGACTTCTATTTCTT 57.489 36.000 0.00 0.00 39.31 2.52
765 767 7.510675 TTGTGGAATAGGGACTTCTATTTCT 57.489 36.000 0.00 0.00 39.31 2.52
781 783 9.316730 GCATGAACACATATATTTTTGTGGAAT 57.683 29.630 10.47 0.76 45.88 3.01
810 812 2.825532 GCCTGGGTTGAGCAAAAATAGA 59.174 45.455 0.00 0.00 0.00 1.98
871 878 3.450904 TGGGTAGCTAGTTCTGTTGGAT 58.549 45.455 0.00 0.00 0.00 3.41
875 882 4.347000 TGTTCTTGGGTAGCTAGTTCTGTT 59.653 41.667 0.00 0.00 0.00 3.16
928 935 2.821546 CGAGCAAGTTCGATGGGATTA 58.178 47.619 0.00 0.00 43.03 1.75
938 945 2.783064 CGAGCGAGCGAGCAAGTTC 61.783 63.158 9.01 0.00 40.15 3.01
941 948 4.785512 ACCGAGCGAGCGAGCAAG 62.786 66.667 9.01 2.50 40.15 4.01
979 986 1.814394 TGCGAGTCACCAACTACGTAT 59.186 47.619 0.00 0.00 38.74 3.06
1065 1072 3.093835 TCCCATAACCCGGGCAGG 61.094 66.667 24.08 17.22 44.11 4.85
1095 1102 2.885861 GAGACGATCACTGCCCGT 59.114 61.111 0.00 0.00 39.41 5.28
1128 1135 1.347707 AGGATCACGAAGCCAAAGACA 59.652 47.619 0.00 0.00 0.00 3.41
1149 1156 1.405526 CCGGTCGACATGTGGATCTTT 60.406 52.381 18.91 0.00 0.00 2.52
1213 1220 4.451900 CTGACAAACCACTTGAGTAAGGT 58.548 43.478 0.00 0.00 38.50 3.50
1230 1237 1.300620 CGTCCGAACCAAGCTGACA 60.301 57.895 0.00 0.00 0.00 3.58
1258 1265 1.866237 GCGTGAAAGGCGATGTTGA 59.134 52.632 0.00 0.00 38.26 3.18
1269 1276 1.959226 GTTCTCCTGGCGCGTGAAA 60.959 57.895 8.43 0.00 0.00 2.69
1346 1353 8.278408 GCAATGGAAGAAGAAATTGAAGTTTTC 58.722 33.333 0.00 0.00 32.86 2.29
1348 1355 7.440255 CAGCAATGGAAGAAGAAATTGAAGTTT 59.560 33.333 0.00 0.00 32.86 2.66
1359 1366 5.563592 TCAAATCTCAGCAATGGAAGAAGA 58.436 37.500 0.00 0.00 0.00 2.87
1368 1375 4.607239 ACAGGGAATCAAATCTCAGCAAT 58.393 39.130 0.00 0.00 0.00 3.56
1450 1458 5.527582 AGACAACAACTAGGACAACAATCAC 59.472 40.000 0.00 0.00 0.00 3.06
1454 1462 5.353394 AGAGACAACAACTAGGACAACAA 57.647 39.130 0.00 0.00 0.00 2.83
1466 1474 6.395426 TCGTAGGAAAACTAGAGACAACAA 57.605 37.500 0.00 0.00 30.77 2.83
1487 1495 6.448053 TCAAATCAGAAAAGACGTACTTCG 57.552 37.500 0.00 0.00 46.00 3.79
1489 1497 9.665264 GAAATTCAAATCAGAAAAGACGTACTT 57.335 29.630 0.00 0.00 40.98 2.24
1516 1524 2.264794 CCTCGCGGGGCCATATAC 59.735 66.667 14.66 0.00 0.00 1.47
1554 1563 4.771577 ACATGGACAAAGAATACATGGCAA 59.228 37.500 0.00 0.00 42.28 4.52
1561 1570 7.425606 AGACAAACAACATGGACAAAGAATAC 58.574 34.615 0.00 0.00 0.00 1.89
1574 1583 3.446873 TGCAAGGTTGAGACAAACAACAT 59.553 39.130 0.00 0.00 46.16 2.71
1672 2644 9.634021 GAGAATCTAAGAAATGACCCCTAATTT 57.366 33.333 0.00 0.00 0.00 1.82
1707 2679 6.570789 CGTTTTTGCAGCTTAAATTGATGTTG 59.429 34.615 0.00 0.00 0.00 3.33
1711 2683 6.215845 AGACGTTTTTGCAGCTTAAATTGAT 58.784 32.000 0.00 0.00 0.00 2.57
1892 2864 5.921408 CGTACTCTCTATGGTGGCTTTATTC 59.079 44.000 0.00 0.00 0.00 1.75
1958 2930 2.281484 GCCTCGTGTGCTTTCCCA 60.281 61.111 0.00 0.00 0.00 4.37
1977 2949 3.003068 GTCATCAACTATGCTGGCATGTC 59.997 47.826 17.09 0.00 37.82 3.06
1994 2966 0.742281 AGTCTGGCATGCGTGTCATC 60.742 55.000 14.71 10.39 39.63 2.92
1996 2968 0.108662 CTAGTCTGGCATGCGTGTCA 60.109 55.000 13.54 13.54 37.69 3.58
2005 2977 2.491675 TCTTCTCGTCTAGTCTGGCA 57.508 50.000 0.00 0.00 0.00 4.92
2088 3060 3.253188 CCTTTCTCCGCAAAATTCTGACA 59.747 43.478 0.00 0.00 0.00 3.58
2102 3074 2.951229 TTGGTTGTCTCCCTTTCTCC 57.049 50.000 0.00 0.00 0.00 3.71
2120 3092 2.100584 TGATTGCGAAAGTTGGTGCTTT 59.899 40.909 0.00 0.00 40.94 3.51
2127 3099 3.438087 AGATGTCCTGATTGCGAAAGTTG 59.562 43.478 0.00 0.00 0.00 3.16
2143 3115 3.262660 TGGATCATGATGCCCTAGATGTC 59.737 47.826 22.72 0.61 0.00 3.06
2149 3121 1.344438 GTCGTGGATCATGATGCCCTA 59.656 52.381 22.72 2.26 31.77 3.53
2178 3150 3.678072 GTCTATGCAGCAGTGAACGTTAA 59.322 43.478 0.00 0.00 0.00 2.01
2183 3155 3.250762 TGTTTGTCTATGCAGCAGTGAAC 59.749 43.478 0.00 1.05 0.00 3.18
2185 3157 2.807967 GTGTTTGTCTATGCAGCAGTGA 59.192 45.455 0.00 0.00 0.00 3.41
2224 3525 6.856895 AGATATCTTTGCTAACAAACTTGCC 58.143 36.000 0.00 0.00 40.84 4.52
2238 3539 8.960591 ACAGGTTTACCATTGAAGATATCTTTG 58.039 33.333 18.88 12.95 38.89 2.77
2242 3543 7.775561 AGGAACAGGTTTACCATTGAAGATATC 59.224 37.037 1.13 0.00 38.89 1.63
2261 3562 2.100916 CCCTATGTACGACCAGGAACAG 59.899 54.545 0.00 0.00 0.00 3.16
2275 3576 2.158385 TGGTTTTTGCTGGTCCCTATGT 60.158 45.455 0.00 0.00 0.00 2.29
2290 3591 1.578897 AGTTGGGGTTTGCTGGTTTT 58.421 45.000 0.00 0.00 0.00 2.43
2292 3593 1.497286 TCTAGTTGGGGTTTGCTGGTT 59.503 47.619 0.00 0.00 0.00 3.67
2317 3619 3.652274 CCTTGTGGGCATTAACAAACAG 58.348 45.455 0.00 0.00 35.95 3.16
2340 3642 1.302431 TTGCGCCTGCTTTCTGCTA 60.302 52.632 4.18 0.00 43.34 3.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.