Multiple sequence alignment - TraesCS1D01G134600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G134600 chr1D 100.000 4212 0 0 1 4212 174114956 174110745 0.000000e+00 7779.0
1 TraesCS1D01G134600 chr1A 96.186 2963 92 12 655 3604 213256042 213253088 0.000000e+00 4826.0
2 TraesCS1D01G134600 chr1A 85.890 489 42 8 128 615 533219392 533218930 2.930000e-136 496.0
3 TraesCS1D01G134600 chr1A 93.431 274 17 1 3940 4212 213252780 213252507 5.070000e-109 405.0
4 TraesCS1D01G134600 chr1A 92.053 151 9 3 3597 3745 375094958 375095107 4.270000e-50 209.0
5 TraesCS1D01G134600 chr1A 94.949 99 3 1 3788 3884 213252884 213252786 2.030000e-33 154.0
6 TraesCS1D01G134600 chr1B 96.386 1854 57 5 613 2460 262064577 262066426 0.000000e+00 3044.0
7 TraesCS1D01G134600 chr1B 92.975 1153 29 12 2459 3604 262066484 262067591 0.000000e+00 1633.0
8 TraesCS1D01G134600 chr1B 94.538 238 13 0 3975 4212 262067872 262068109 6.650000e-98 368.0
9 TraesCS1D01G134600 chr1B 95.812 191 7 1 3742 3932 262067588 262067777 1.470000e-79 307.0
10 TraesCS1D01G134600 chr1B 93.085 188 12 1 429 615 642057387 642057574 1.490000e-69 274.0
11 TraesCS1D01G134600 chr1B 92.593 162 9 3 3589 3749 7701837 7701996 3.280000e-56 230.0
12 TraesCS1D01G134600 chr1B 85.185 189 14 7 115 303 642057184 642057358 9.300000e-42 182.0
13 TraesCS1D01G134600 chr4A 85.276 489 45 13 128 615 220629434 220629896 2.950000e-131 479.0
14 TraesCS1D01G134600 chr4A 97.122 139 2 2 1 139 8554888 8554752 2.530000e-57 233.0
15 TraesCS1D01G134600 chr4A 79.923 259 42 6 2972 3224 694762067 694761813 9.300000e-42 182.0
16 TraesCS1D01G134600 chr7B 91.775 231 18 1 386 615 616995222 616994992 1.890000e-83 320.0
17 TraesCS1D01G134600 chr7B 90.604 149 11 3 3597 3745 484890490 484890345 1.190000e-45 195.0
18 TraesCS1D01G134600 chr7B 86.842 152 17 3 468 617 602112425 602112275 2.600000e-37 167.0
19 TraesCS1D01G134600 chr5D 91.379 232 19 1 385 615 462434242 462434011 2.440000e-82 316.0
20 TraesCS1D01G134600 chr5D 96.454 141 3 2 1 140 485148083 485148222 9.110000e-57 231.0
21 TraesCS1D01G134600 chr5D 80.579 242 18 15 128 353 462434422 462434194 4.360000e-35 159.0
22 TraesCS1D01G134600 chr3B 97.810 137 2 1 1 137 502053989 502054124 7.040000e-58 235.0
23 TraesCS1D01G134600 chr3B 87.919 149 17 1 468 615 635748150 635748002 1.560000e-39 174.0
24 TraesCS1D01G134600 chr7D 96.503 143 2 3 1 143 28742239 28742378 2.530000e-57 233.0
25 TraesCS1D01G134600 chr7D 95.833 144 4 2 1 143 98002796 98002938 9.110000e-57 231.0
26 TraesCS1D01G134600 chr6D 95.862 145 5 1 3601 3744 469393453 469393597 2.530000e-57 233.0
27 TraesCS1D01G134600 chr6D 96.479 142 1 4 1 141 326321213 326321351 9.110000e-57 231.0
28 TraesCS1D01G134600 chr6D 96.454 141 3 2 1 141 419918305 419918167 9.110000e-57 231.0
29 TraesCS1D01G134600 chr2A 95.804 143 4 2 1 143 451983275 451983415 3.280000e-56 230.0
30 TraesCS1D01G134600 chr2A 94.558 147 8 0 3601 3747 759537799 759537653 1.180000e-55 228.0
31 TraesCS1D01G134600 chr2A 88.000 125 15 0 361 485 663492423 663492299 9.440000e-32 148.0
32 TraesCS1D01G134600 chr4D 95.238 147 2 5 1 145 107598863 107598720 1.180000e-55 228.0
33 TraesCS1D01G134600 chr2B 93.750 144 8 1 3599 3742 410944223 410944365 9.170000e-52 215.0
34 TraesCS1D01G134600 chr2B 91.946 149 11 1 3597 3745 557395182 557395329 1.530000e-49 207.0
35 TraesCS1D01G134600 chr2B 90.604 149 13 1 468 615 506111401 506111549 3.320000e-46 196.0
36 TraesCS1D01G134600 chr6B 86.441 177 11 6 128 303 55719190 55719354 9.300000e-42 182.0
37 TraesCS1D01G134600 chr6B 86.577 149 19 1 468 615 157631355 157631207 3.370000e-36 163.0
38 TraesCS1D01G134600 chr6B 100.000 31 0 0 305 335 55719412 55719442 1.640000e-04 58.4
39 TraesCS1D01G134600 chrUn 88.591 149 15 2 3595 3742 302944556 302944703 3.350000e-41 180.0
40 TraesCS1D01G134600 chrUn 89.928 139 14 0 3604 3742 322239593 322239455 3.350000e-41 180.0
41 TraesCS1D01G134600 chr7A 86.275 153 19 2 468 619 556656198 556656047 9.370000e-37 165.0
42 TraesCS1D01G134600 chr6A 89.394 66 7 0 299 364 25222197 25222132 2.700000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G134600 chr1D 174110745 174114956 4211 True 7779 7779 100.000000 1 4212 1 chr1D.!!$R1 4211
1 TraesCS1D01G134600 chr1A 213252507 213256042 3535 True 1795 4826 94.855333 655 4212 3 chr1A.!!$R2 3557
2 TraesCS1D01G134600 chr1B 262064577 262068109 3532 False 1338 3044 94.927750 613 4212 4 chr1B.!!$F2 3599

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
368 369 0.029035 GCAGCAAATCGGCAGAGATG 59.971 55.0 0.00 0.00 35.87 2.90 F
469 470 0.099968 CAGCGCAATCAGATGGTTGG 59.900 55.0 11.47 0.03 0.00 3.77 F
542 543 0.251341 ATGACTCAAGGCCAACCCAC 60.251 55.0 5.01 0.00 36.11 4.61 F
565 566 0.527565 GCACATTGGCCTCGACATTT 59.472 50.0 3.32 0.00 0.00 2.32 F
2300 2318 0.740868 CATGGCTCTGTACCGTGTGG 60.741 60.0 0.00 0.00 39.04 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1897 1907 0.251341 ATCCATGCCCGCCTTATTCC 60.251 55.000 0.00 0.00 0.00 3.01 R
2378 2396 1.102154 CACACAAACCAGGTTGAGCA 58.898 50.000 5.30 0.00 32.59 4.26 R
2432 2451 4.792804 GCTCCTCACAGCCAGCCC 62.793 72.222 0.00 0.00 32.76 5.19 R
2635 2713 4.487948 AGACACGCATTGGATCAAAAATG 58.512 39.130 9.49 9.49 36.95 2.32 R
3709 3794 0.040499 AGTCCCTCCACTCCAGACTC 59.960 60.000 0.00 0.00 32.42 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.062323 GTAGAGTTGTATCGGTGGTCG 57.938 52.381 0.00 0.00 40.90 4.79
43 44 7.792032 TCGATAGAACTTGAGGGAATATTTGT 58.208 34.615 0.00 0.00 46.15 2.83
44 45 8.265055 TCGATAGAACTTGAGGGAATATTTGTT 58.735 33.333 0.00 0.00 46.15 2.83
45 46 8.552034 CGATAGAACTTGAGGGAATATTTGTTC 58.448 37.037 0.00 0.00 39.76 3.18
46 47 9.620259 GATAGAACTTGAGGGAATATTTGTTCT 57.380 33.333 0.00 0.00 43.21 3.01
48 49 8.794335 AGAACTTGAGGGAATATTTGTTCTAC 57.206 34.615 0.00 0.00 40.35 2.59
49 50 7.829706 AGAACTTGAGGGAATATTTGTTCTACC 59.170 37.037 0.00 0.00 40.35 3.18
50 51 7.272144 ACTTGAGGGAATATTTGTTCTACCT 57.728 36.000 0.00 0.00 0.00 3.08
51 52 7.699878 ACTTGAGGGAATATTTGTTCTACCTT 58.300 34.615 0.00 0.00 0.00 3.50
52 53 8.170730 ACTTGAGGGAATATTTGTTCTACCTTT 58.829 33.333 0.00 0.00 0.00 3.11
53 54 9.681062 CTTGAGGGAATATTTGTTCTACCTTTA 57.319 33.333 0.00 0.00 0.00 1.85
54 55 9.681062 TTGAGGGAATATTTGTTCTACCTTTAG 57.319 33.333 0.00 0.00 0.00 1.85
55 56 7.773690 TGAGGGAATATTTGTTCTACCTTTAGC 59.226 37.037 0.00 0.00 0.00 3.09
56 57 7.873195 AGGGAATATTTGTTCTACCTTTAGCT 58.127 34.615 0.00 0.00 0.00 3.32
57 58 8.336987 AGGGAATATTTGTTCTACCTTTAGCTT 58.663 33.333 0.00 0.00 0.00 3.74
58 59 8.622157 GGGAATATTTGTTCTACCTTTAGCTTC 58.378 37.037 0.00 0.00 0.00 3.86
59 60 9.397280 GGAATATTTGTTCTACCTTTAGCTTCT 57.603 33.333 0.00 0.00 0.00 2.85
61 62 6.969828 ATTTGTTCTACCTTTAGCTTCTCG 57.030 37.500 0.00 0.00 0.00 4.04
62 63 5.464030 TTGTTCTACCTTTAGCTTCTCGT 57.536 39.130 0.00 0.00 0.00 4.18
63 64 5.464030 TGTTCTACCTTTAGCTTCTCGTT 57.536 39.130 0.00 0.00 0.00 3.85
64 65 5.227908 TGTTCTACCTTTAGCTTCTCGTTG 58.772 41.667 0.00 0.00 0.00 4.10
65 66 4.451629 TCTACCTTTAGCTTCTCGTTGG 57.548 45.455 0.00 0.00 0.00 3.77
66 67 2.474410 ACCTTTAGCTTCTCGTTGGG 57.526 50.000 0.00 0.00 0.00 4.12
67 68 1.697982 ACCTTTAGCTTCTCGTTGGGT 59.302 47.619 0.00 0.00 0.00 4.51
68 69 2.105993 ACCTTTAGCTTCTCGTTGGGTT 59.894 45.455 0.00 0.00 0.00 4.11
69 70 2.742589 CCTTTAGCTTCTCGTTGGGTTC 59.257 50.000 0.00 0.00 0.00 3.62
70 71 2.074547 TTAGCTTCTCGTTGGGTTCG 57.925 50.000 0.00 0.00 0.00 3.95
71 72 1.250328 TAGCTTCTCGTTGGGTTCGA 58.750 50.000 0.00 0.00 35.96 3.71
72 73 0.319641 AGCTTCTCGTTGGGTTCGAC 60.320 55.000 0.00 0.00 33.71 4.20
73 74 0.599204 GCTTCTCGTTGGGTTCGACA 60.599 55.000 0.00 0.00 33.71 4.35
74 75 1.137513 CTTCTCGTTGGGTTCGACAC 58.862 55.000 0.00 0.00 33.71 3.67
75 76 0.748450 TTCTCGTTGGGTTCGACACT 59.252 50.000 0.00 0.00 33.71 3.55
76 77 0.313043 TCTCGTTGGGTTCGACACTC 59.687 55.000 0.00 0.00 33.71 3.51
77 78 0.314302 CTCGTTGGGTTCGACACTCT 59.686 55.000 0.00 0.00 33.71 3.24
78 79 0.748450 TCGTTGGGTTCGACACTCTT 59.252 50.000 0.00 0.00 32.30 2.85
79 80 1.955778 TCGTTGGGTTCGACACTCTTA 59.044 47.619 0.00 0.00 32.30 2.10
80 81 2.056577 CGTTGGGTTCGACACTCTTAC 58.943 52.381 0.00 0.00 0.00 2.34
81 82 2.288030 CGTTGGGTTCGACACTCTTACT 60.288 50.000 0.00 0.00 0.00 2.24
82 83 3.725490 GTTGGGTTCGACACTCTTACTT 58.275 45.455 0.00 0.00 0.00 2.24
83 84 4.557296 CGTTGGGTTCGACACTCTTACTTA 60.557 45.833 0.00 0.00 0.00 2.24
84 85 5.476614 GTTGGGTTCGACACTCTTACTTAT 58.523 41.667 0.00 0.00 0.00 1.73
85 86 5.320549 TGGGTTCGACACTCTTACTTATC 57.679 43.478 0.00 0.00 0.00 1.75
86 87 4.142534 TGGGTTCGACACTCTTACTTATCG 60.143 45.833 0.00 0.00 0.00 2.92
87 88 4.095483 GGGTTCGACACTCTTACTTATCGA 59.905 45.833 0.00 0.00 36.85 3.59
88 89 5.392380 GGGTTCGACACTCTTACTTATCGAA 60.392 44.000 2.99 2.99 43.90 3.71
89 90 6.088824 GGTTCGACACTCTTACTTATCGAAA 58.911 40.000 8.30 0.00 46.48 3.46
90 91 6.250951 GGTTCGACACTCTTACTTATCGAAAG 59.749 42.308 8.30 0.00 46.48 2.62
91 92 7.020010 GTTCGACACTCTTACTTATCGAAAGA 58.980 38.462 8.30 5.57 46.48 2.52
92 93 7.216693 GTTCGACACTCTTACTTATCGAAAGAG 59.783 40.741 18.06 18.06 46.48 2.85
93 94 5.966503 CGACACTCTTACTTATCGAAAGAGG 59.033 44.000 21.76 15.05 46.82 3.69
94 95 5.652518 ACACTCTTACTTATCGAAAGAGGC 58.347 41.667 21.76 0.00 46.82 4.70
95 96 5.419471 ACACTCTTACTTATCGAAAGAGGCT 59.581 40.000 21.76 8.45 46.82 4.58
96 97 6.602406 ACACTCTTACTTATCGAAAGAGGCTA 59.398 38.462 21.76 0.00 46.82 3.93
97 98 6.913673 CACTCTTACTTATCGAAAGAGGCTAC 59.086 42.308 21.76 0.00 46.82 3.58
98 99 6.602406 ACTCTTACTTATCGAAAGAGGCTACA 59.398 38.462 21.76 0.00 46.82 2.74
99 100 7.122353 ACTCTTACTTATCGAAAGAGGCTACAA 59.878 37.037 21.76 3.83 46.82 2.41
106 107 4.442706 TCGAAAGAGGCTACAATTGATCC 58.557 43.478 13.59 9.59 34.84 3.36
107 108 3.561725 CGAAAGAGGCTACAATTGATCCC 59.438 47.826 13.59 8.53 0.00 3.85
108 109 3.584733 AAGAGGCTACAATTGATCCCC 57.415 47.619 13.59 6.75 0.00 4.81
109 110 2.781667 AGAGGCTACAATTGATCCCCT 58.218 47.619 13.59 11.39 0.00 4.79
110 111 3.941629 AGAGGCTACAATTGATCCCCTA 58.058 45.455 13.59 0.00 0.00 3.53
111 112 4.307259 AGAGGCTACAATTGATCCCCTAA 58.693 43.478 13.59 0.00 0.00 2.69
112 113 4.916424 AGAGGCTACAATTGATCCCCTAAT 59.084 41.667 13.59 2.37 0.00 1.73
113 114 6.091555 AGAGGCTACAATTGATCCCCTAATA 58.908 40.000 13.59 0.00 0.00 0.98
114 115 6.013293 AGAGGCTACAATTGATCCCCTAATAC 60.013 42.308 13.59 1.06 0.00 1.89
115 116 5.852250 AGGCTACAATTGATCCCCTAATACT 59.148 40.000 13.59 0.00 0.00 2.12
116 117 6.332901 AGGCTACAATTGATCCCCTAATACTT 59.667 38.462 13.59 0.00 0.00 2.24
117 118 6.431234 GGCTACAATTGATCCCCTAATACTTG 59.569 42.308 13.59 0.00 0.00 3.16
118 119 6.998673 GCTACAATTGATCCCCTAATACTTGT 59.001 38.462 13.59 0.00 0.00 3.16
119 120 7.041098 GCTACAATTGATCCCCTAATACTTGTG 60.041 40.741 13.59 0.00 0.00 3.33
120 121 6.129179 ACAATTGATCCCCTAATACTTGTGG 58.871 40.000 13.59 0.00 0.00 4.17
121 122 4.788925 TTGATCCCCTAATACTTGTGGG 57.211 45.455 0.00 0.00 39.37 4.61
122 123 3.743132 TGATCCCCTAATACTTGTGGGT 58.257 45.455 0.00 0.00 38.03 4.51
123 124 4.116113 TGATCCCCTAATACTTGTGGGTT 58.884 43.478 0.00 0.00 38.03 4.11
124 125 5.290335 TGATCCCCTAATACTTGTGGGTTA 58.710 41.667 0.00 0.00 38.03 2.85
125 126 5.914716 TGATCCCCTAATACTTGTGGGTTAT 59.085 40.000 0.00 0.00 38.03 1.89
126 127 5.899631 TCCCCTAATACTTGTGGGTTATC 57.100 43.478 0.00 0.00 38.03 1.75
127 128 5.290335 TCCCCTAATACTTGTGGGTTATCA 58.710 41.667 0.00 0.00 38.03 2.15
128 129 5.368523 TCCCCTAATACTTGTGGGTTATCAG 59.631 44.000 0.00 0.00 38.03 2.90
129 130 5.063880 CCCTAATACTTGTGGGTTATCAGC 58.936 45.833 0.00 0.00 35.13 4.26
130 131 5.163195 CCCTAATACTTGTGGGTTATCAGCT 60.163 44.000 0.00 0.00 35.13 4.24
131 132 6.042781 CCCTAATACTTGTGGGTTATCAGCTA 59.957 42.308 0.00 0.00 35.13 3.32
132 133 6.929606 CCTAATACTTGTGGGTTATCAGCTAC 59.070 42.308 0.00 0.00 32.69 3.58
133 134 3.629142 ACTTGTGGGTTATCAGCTACC 57.371 47.619 0.00 0.00 31.07 3.18
134 135 2.910319 ACTTGTGGGTTATCAGCTACCA 59.090 45.455 5.76 0.00 36.10 3.25
138 139 2.261729 TGGGTTATCAGCTACCACACA 58.738 47.619 5.76 0.00 36.10 3.72
139 140 2.843730 TGGGTTATCAGCTACCACACAT 59.156 45.455 5.76 0.00 36.10 3.21
140 141 3.118408 TGGGTTATCAGCTACCACACATC 60.118 47.826 5.76 0.00 36.10 3.06
141 142 3.118408 GGGTTATCAGCTACCACACATCA 60.118 47.826 5.76 0.00 36.10 3.07
142 143 3.871594 GGTTATCAGCTACCACACATCAC 59.128 47.826 0.00 0.00 34.48 3.06
143 144 4.383118 GGTTATCAGCTACCACACATCACT 60.383 45.833 0.00 0.00 34.48 3.41
144 145 2.749280 TCAGCTACCACACATCACTG 57.251 50.000 0.00 0.00 0.00 3.66
145 146 2.247358 TCAGCTACCACACATCACTGA 58.753 47.619 0.00 0.00 0.00 3.41
146 147 2.029020 TCAGCTACCACACATCACTGAC 60.029 50.000 0.00 0.00 0.00 3.51
147 148 1.276421 AGCTACCACACATCACTGACC 59.724 52.381 0.00 0.00 0.00 4.02
148 149 1.001974 GCTACCACACATCACTGACCA 59.998 52.381 0.00 0.00 0.00 4.02
149 150 2.549992 GCTACCACACATCACTGACCAA 60.550 50.000 0.00 0.00 0.00 3.67
150 151 2.260844 ACCACACATCACTGACCAAG 57.739 50.000 0.00 0.00 0.00 3.61
151 152 1.768275 ACCACACATCACTGACCAAGA 59.232 47.619 0.00 0.00 0.00 3.02
152 153 2.172505 ACCACACATCACTGACCAAGAA 59.827 45.455 0.00 0.00 0.00 2.52
153 154 3.213506 CCACACATCACTGACCAAGAAA 58.786 45.455 0.00 0.00 0.00 2.52
154 155 3.251729 CCACACATCACTGACCAAGAAAG 59.748 47.826 0.00 0.00 0.00 2.62
155 156 4.129380 CACACATCACTGACCAAGAAAGA 58.871 43.478 0.00 0.00 0.00 2.52
156 157 4.576053 CACACATCACTGACCAAGAAAGAA 59.424 41.667 0.00 0.00 0.00 2.52
157 158 5.066375 CACACATCACTGACCAAGAAAGAAA 59.934 40.000 0.00 0.00 0.00 2.52
158 159 5.066505 ACACATCACTGACCAAGAAAGAAAC 59.933 40.000 0.00 0.00 0.00 2.78
159 160 4.580580 ACATCACTGACCAAGAAAGAAACC 59.419 41.667 0.00 0.00 0.00 3.27
160 161 4.229304 TCACTGACCAAGAAAGAAACCA 57.771 40.909 0.00 0.00 0.00 3.67
161 162 4.199310 TCACTGACCAAGAAAGAAACCAG 58.801 43.478 0.00 0.00 0.00 4.00
162 163 3.316308 CACTGACCAAGAAAGAAACCAGG 59.684 47.826 0.00 0.00 0.00 4.45
163 164 3.202151 ACTGACCAAGAAAGAAACCAGGA 59.798 43.478 0.00 0.00 0.00 3.86
164 165 4.141158 ACTGACCAAGAAAGAAACCAGGAT 60.141 41.667 0.00 0.00 0.00 3.24
165 166 4.803452 TGACCAAGAAAGAAACCAGGATT 58.197 39.130 0.00 0.00 0.00 3.01
166 167 4.584325 TGACCAAGAAAGAAACCAGGATTG 59.416 41.667 0.00 0.00 0.00 2.67
175 176 2.125147 CCAGGATTGGCGCTTCGA 60.125 61.111 7.64 0.00 37.73 3.71
176 177 2.176273 CCAGGATTGGCGCTTCGAG 61.176 63.158 7.64 0.00 37.73 4.04
177 178 2.512515 AGGATTGGCGCTTCGAGC 60.513 61.111 7.64 0.00 38.02 5.03
178 179 2.512515 GGATTGGCGCTTCGAGCT 60.513 61.111 7.64 0.00 39.60 4.09
179 180 2.705826 GATTGGCGCTTCGAGCTG 59.294 61.111 7.64 0.00 39.60 4.24
180 181 1.811266 GATTGGCGCTTCGAGCTGA 60.811 57.895 7.64 0.00 39.60 4.26
181 182 1.361668 GATTGGCGCTTCGAGCTGAA 61.362 55.000 7.64 0.00 39.60 3.02
182 183 1.639298 ATTGGCGCTTCGAGCTGAAC 61.639 55.000 7.64 0.00 39.60 3.18
183 184 3.843240 GGCGCTTCGAGCTGAACG 61.843 66.667 7.64 4.08 39.60 3.95
184 185 3.843240 GCGCTTCGAGCTGAACGG 61.843 66.667 0.00 0.00 39.60 4.44
185 186 3.181967 CGCTTCGAGCTGAACGGG 61.182 66.667 0.00 0.00 39.60 5.28
186 187 2.261671 GCTTCGAGCTGAACGGGA 59.738 61.111 0.00 0.00 38.45 5.14
187 188 1.153549 GCTTCGAGCTGAACGGGAT 60.154 57.895 0.00 0.00 38.45 3.85
188 189 1.148759 GCTTCGAGCTGAACGGGATC 61.149 60.000 0.00 0.00 38.45 3.36
189 190 0.457851 CTTCGAGCTGAACGGGATCT 59.542 55.000 0.00 0.00 31.87 2.75
190 191 1.676529 CTTCGAGCTGAACGGGATCTA 59.323 52.381 0.00 0.00 31.87 1.98
191 192 1.022735 TCGAGCTGAACGGGATCTAC 58.977 55.000 0.00 0.00 0.00 2.59
192 193 0.317103 CGAGCTGAACGGGATCTACG 60.317 60.000 0.00 8.44 37.36 3.51
193 194 0.595310 GAGCTGAACGGGATCTACGC 60.595 60.000 9.66 0.00 34.00 4.42
194 195 1.038130 AGCTGAACGGGATCTACGCT 61.038 55.000 9.66 0.00 34.00 5.07
195 196 0.872021 GCTGAACGGGATCTACGCTG 60.872 60.000 9.66 0.00 34.00 5.18
196 197 0.249073 CTGAACGGGATCTACGCTGG 60.249 60.000 9.66 0.00 34.00 4.85
197 198 1.067582 GAACGGGATCTACGCTGGG 59.932 63.158 9.66 0.00 34.00 4.45
198 199 1.380785 AACGGGATCTACGCTGGGA 60.381 57.895 9.66 0.00 34.00 4.37
199 200 0.974010 AACGGGATCTACGCTGGGAA 60.974 55.000 9.66 0.00 34.00 3.97
200 201 1.364171 CGGGATCTACGCTGGGAAG 59.636 63.158 0.00 0.00 0.00 3.46
201 202 1.749033 GGGATCTACGCTGGGAAGG 59.251 63.158 0.00 0.00 0.00 3.46
202 203 1.749033 GGATCTACGCTGGGAAGGG 59.251 63.158 0.00 0.00 0.00 3.95
203 204 1.749033 GATCTACGCTGGGAAGGGG 59.251 63.158 0.00 0.00 0.00 4.79
204 205 0.759436 GATCTACGCTGGGAAGGGGA 60.759 60.000 0.00 0.00 0.00 4.81
205 206 0.760945 ATCTACGCTGGGAAGGGGAG 60.761 60.000 0.00 0.00 34.38 4.30
206 207 2.365105 TACGCTGGGAAGGGGAGG 60.365 66.667 0.00 0.00 0.00 4.30
207 208 2.873557 CTACGCTGGGAAGGGGAGGA 62.874 65.000 0.00 0.00 0.00 3.71
208 209 2.465010 TACGCTGGGAAGGGGAGGAA 62.465 60.000 0.00 0.00 0.00 3.36
209 210 3.002371 GCTGGGAAGGGGAGGAAG 58.998 66.667 0.00 0.00 0.00 3.46
210 211 3.002371 CTGGGAAGGGGAGGAAGC 58.998 66.667 0.00 0.00 0.00 3.86
211 212 2.614013 TGGGAAGGGGAGGAAGCC 60.614 66.667 0.00 0.00 0.00 4.35
212 213 2.614013 GGGAAGGGGAGGAAGCCA 60.614 66.667 0.00 0.00 0.00 4.75
213 214 2.684499 GGGAAGGGGAGGAAGCCAG 61.684 68.421 0.00 0.00 0.00 4.85
214 215 2.273776 GAAGGGGAGGAAGCCAGC 59.726 66.667 0.00 0.00 0.00 4.85
215 216 2.204213 AAGGGGAGGAAGCCAGCT 60.204 61.111 0.00 0.00 0.00 4.24
216 217 0.983378 GAAGGGGAGGAAGCCAGCTA 60.983 60.000 0.00 0.00 0.00 3.32
217 218 0.985490 AAGGGGAGGAAGCCAGCTAG 60.985 60.000 0.00 0.00 0.00 3.42
218 219 1.383248 GGGGAGGAAGCCAGCTAGA 60.383 63.158 0.00 0.00 0.00 2.43
219 220 1.406860 GGGGAGGAAGCCAGCTAGAG 61.407 65.000 0.00 0.00 0.00 2.43
220 221 0.689412 GGGAGGAAGCCAGCTAGAGT 60.689 60.000 0.00 0.00 0.00 3.24
221 222 0.750249 GGAGGAAGCCAGCTAGAGTC 59.250 60.000 0.00 0.00 0.00 3.36
222 223 1.687996 GGAGGAAGCCAGCTAGAGTCT 60.688 57.143 0.00 0.00 0.00 3.24
223 224 1.681264 GAGGAAGCCAGCTAGAGTCTC 59.319 57.143 0.00 0.00 0.00 3.36
224 225 1.006519 AGGAAGCCAGCTAGAGTCTCA 59.993 52.381 0.00 0.00 0.00 3.27
225 226 1.136110 GGAAGCCAGCTAGAGTCTCAC 59.864 57.143 0.00 0.00 0.00 3.51
226 227 1.136110 GAAGCCAGCTAGAGTCTCACC 59.864 57.143 0.00 0.00 0.00 4.02
227 228 0.334676 AGCCAGCTAGAGTCTCACCT 59.665 55.000 0.00 0.00 0.00 4.00
228 229 0.459489 GCCAGCTAGAGTCTCACCTG 59.541 60.000 0.00 1.82 0.00 4.00
229 230 0.459489 CCAGCTAGAGTCTCACCTGC 59.541 60.000 0.00 0.90 0.00 4.85
230 231 1.180907 CAGCTAGAGTCTCACCTGCA 58.819 55.000 0.00 0.00 0.00 4.41
231 232 1.547820 CAGCTAGAGTCTCACCTGCAA 59.452 52.381 0.00 0.00 0.00 4.08
232 233 1.548269 AGCTAGAGTCTCACCTGCAAC 59.452 52.381 0.00 0.00 0.00 4.17
233 234 1.404851 GCTAGAGTCTCACCTGCAACC 60.405 57.143 0.00 0.00 0.00 3.77
234 235 0.888619 TAGAGTCTCACCTGCAACCG 59.111 55.000 0.00 0.00 0.00 4.44
235 236 1.374758 GAGTCTCACCTGCAACCGG 60.375 63.158 0.00 0.00 0.00 5.28
236 237 1.816863 GAGTCTCACCTGCAACCGGA 61.817 60.000 9.46 0.00 0.00 5.14
237 238 1.070786 GTCTCACCTGCAACCGGAA 59.929 57.895 9.46 0.00 0.00 4.30
238 239 0.321653 GTCTCACCTGCAACCGGAAT 60.322 55.000 9.46 0.00 0.00 3.01
239 240 0.321564 TCTCACCTGCAACCGGAATG 60.322 55.000 9.46 8.22 0.00 2.67
240 241 1.303236 TCACCTGCAACCGGAATGG 60.303 57.895 9.46 5.27 46.41 3.16
241 242 2.676471 ACCTGCAACCGGAATGGC 60.676 61.111 9.46 6.44 43.94 4.40
242 243 2.676121 CCTGCAACCGGAATGGCA 60.676 61.111 9.46 11.20 43.94 4.92
243 244 2.274645 CCTGCAACCGGAATGGCAA 61.275 57.895 9.46 0.00 43.94 4.52
244 245 1.213537 CTGCAACCGGAATGGCAAG 59.786 57.895 9.46 2.89 43.94 4.01
245 246 2.216750 CTGCAACCGGAATGGCAAGG 62.217 60.000 9.46 0.00 43.94 3.61
246 247 3.005540 GCAACCGGAATGGCAAGGG 62.006 63.158 9.46 0.00 43.94 3.95
247 248 2.679996 AACCGGAATGGCAAGGGC 60.680 61.111 9.46 0.00 43.94 5.19
249 250 4.794648 CCGGAATGGCAAGGGCGA 62.795 66.667 0.00 0.00 42.47 5.54
250 251 3.508840 CGGAATGGCAAGGGCGAC 61.509 66.667 0.00 0.00 42.47 5.19
251 252 2.361104 GGAATGGCAAGGGCGACA 60.361 61.111 0.00 0.00 42.47 4.35
252 253 2.409870 GGAATGGCAAGGGCGACAG 61.410 63.158 0.00 0.00 42.47 3.51
253 254 3.056313 GAATGGCAAGGGCGACAGC 62.056 63.158 0.00 0.00 42.47 4.40
257 258 4.090057 GCAAGGGCGACAGCGAAC 62.090 66.667 0.00 0.00 46.35 3.95
258 259 3.777925 CAAGGGCGACAGCGAACG 61.778 66.667 0.00 0.00 46.35 3.95
281 282 4.742201 GCAGGTCGGCAAGCTCGA 62.742 66.667 0.00 0.00 31.91 4.04
300 301 2.105528 GGCGGCCGAGATAACGAA 59.894 61.111 33.48 0.00 35.09 3.85
301 302 2.235699 GGCGGCCGAGATAACGAAC 61.236 63.158 33.48 6.40 35.09 3.95
302 303 2.574222 GCGGCCGAGATAACGAACG 61.574 63.158 33.48 0.00 36.18 3.95
303 304 2.574222 CGGCCGAGATAACGAACGC 61.574 63.158 24.07 0.00 35.09 4.84
304 305 2.235699 GGCCGAGATAACGAACGCC 61.236 63.158 0.00 0.00 33.05 5.68
305 306 2.574222 GCCGAGATAACGAACGCCG 61.574 63.158 0.00 0.00 45.44 6.46
306 307 1.942712 CCGAGATAACGAACGCCGG 60.943 63.158 0.00 0.00 43.93 6.13
307 308 2.574222 CGAGATAACGAACGCCGGC 61.574 63.158 19.07 19.07 43.93 6.13
308 309 2.574222 GAGATAACGAACGCCGGCG 61.574 63.158 44.88 44.88 43.93 6.46
326 327 2.987547 GCAGCAGGCCAGCAAAGA 60.988 61.111 23.38 0.00 36.85 2.52
327 328 2.348888 GCAGCAGGCCAGCAAAGAT 61.349 57.895 23.38 0.00 36.85 2.40
328 329 1.511305 CAGCAGGCCAGCAAAGATG 59.489 57.895 23.38 7.43 36.85 2.90
329 330 1.681327 AGCAGGCCAGCAAAGATGG 60.681 57.895 23.38 0.00 42.66 3.51
330 331 1.980772 GCAGGCCAGCAAAGATGGT 60.981 57.895 16.36 0.00 41.69 3.55
331 332 1.941999 GCAGGCCAGCAAAGATGGTC 61.942 60.000 16.36 0.00 44.82 4.02
332 333 3.190878 GGCCAGCAAAGATGGTCG 58.809 61.111 0.00 0.00 41.69 4.79
333 334 2.409870 GGCCAGCAAAGATGGTCGG 61.410 63.158 0.00 0.00 41.69 4.79
334 335 2.409870 GCCAGCAAAGATGGTCGGG 61.410 63.158 3.04 0.00 41.69 5.14
335 336 1.750399 CCAGCAAAGATGGTCGGGG 60.750 63.158 0.00 0.00 34.00 5.73
336 337 1.750399 CAGCAAAGATGGTCGGGGG 60.750 63.158 0.00 0.00 34.35 5.40
337 338 3.140814 GCAAAGATGGTCGGGGGC 61.141 66.667 0.00 0.00 0.00 5.80
338 339 2.354729 CAAAGATGGTCGGGGGCA 59.645 61.111 0.00 0.00 0.00 5.36
339 340 1.750399 CAAAGATGGTCGGGGGCAG 60.750 63.158 0.00 0.00 0.00 4.85
340 341 3.645268 AAAGATGGTCGGGGGCAGC 62.645 63.158 0.00 0.00 0.00 5.25
357 358 3.055719 CCGACGGTGGCAGCAAAT 61.056 61.111 17.80 0.75 0.00 2.32
358 359 2.480555 CGACGGTGGCAGCAAATC 59.519 61.111 17.80 9.70 0.00 2.17
359 360 2.480555 GACGGTGGCAGCAAATCG 59.519 61.111 17.80 2.12 0.00 3.34
360 361 3.039202 GACGGTGGCAGCAAATCGG 62.039 63.158 17.80 1.35 0.00 4.18
361 362 4.481112 CGGTGGCAGCAAATCGGC 62.481 66.667 17.80 0.00 35.03 5.54
362 363 3.372730 GGTGGCAGCAAATCGGCA 61.373 61.111 12.58 0.00 37.64 5.69
363 364 2.180017 GTGGCAGCAAATCGGCAG 59.820 61.111 0.00 0.00 38.50 4.85
364 365 2.033911 TGGCAGCAAATCGGCAGA 59.966 55.556 0.00 0.00 37.64 4.26
365 366 2.042259 TGGCAGCAAATCGGCAGAG 61.042 57.895 0.00 0.00 37.64 3.35
366 367 1.746615 GGCAGCAAATCGGCAGAGA 60.747 57.895 0.00 0.00 37.64 3.10
367 368 1.099879 GGCAGCAAATCGGCAGAGAT 61.100 55.000 0.00 0.00 37.64 2.75
368 369 0.029035 GCAGCAAATCGGCAGAGATG 59.971 55.000 0.00 0.00 35.87 2.90
369 370 0.661552 CAGCAAATCGGCAGAGATGG 59.338 55.000 0.00 0.00 35.83 3.51
370 371 1.099879 AGCAAATCGGCAGAGATGGC 61.100 55.000 0.00 0.00 35.83 4.40
405 406 4.803426 GGCAGCAGACCGACGGAG 62.803 72.222 23.38 11.04 0.00 4.63
406 407 3.749064 GCAGCAGACCGACGGAGA 61.749 66.667 23.38 0.00 0.00 3.71
407 408 3.069980 GCAGCAGACCGACGGAGAT 62.070 63.158 23.38 5.75 0.00 2.75
408 409 1.226802 CAGCAGACCGACGGAGATG 60.227 63.158 23.38 16.15 0.00 2.90
409 410 2.105128 GCAGACCGACGGAGATGG 59.895 66.667 23.38 6.17 0.00 3.51
410 411 2.711922 GCAGACCGACGGAGATGGT 61.712 63.158 23.38 0.00 40.73 3.55
411 412 1.890894 CAGACCGACGGAGATGGTT 59.109 57.895 23.38 0.00 38.49 3.67
412 413 0.458543 CAGACCGACGGAGATGGTTG 60.459 60.000 23.38 3.97 38.49 3.77
413 414 1.153628 GACCGACGGAGATGGTTGG 60.154 63.158 23.38 0.00 43.41 3.77
414 415 2.186903 CCGACGGAGATGGTTGGG 59.813 66.667 8.64 0.00 35.63 4.12
415 416 2.186903 CGACGGAGATGGTTGGGG 59.813 66.667 0.00 0.00 0.00 4.96
416 417 2.590092 GACGGAGATGGTTGGGGG 59.410 66.667 0.00 0.00 0.00 5.40
417 418 3.699134 GACGGAGATGGTTGGGGGC 62.699 68.421 0.00 0.00 0.00 5.80
418 419 3.727258 CGGAGATGGTTGGGGGCA 61.727 66.667 0.00 0.00 0.00 5.36
419 420 2.276740 GGAGATGGTTGGGGGCAG 59.723 66.667 0.00 0.00 0.00 4.85
420 421 2.440980 GAGATGGTTGGGGGCAGC 60.441 66.667 0.00 0.00 0.00 5.25
421 422 4.066139 AGATGGTTGGGGGCAGCC 62.066 66.667 1.26 1.26 0.00 4.85
422 423 4.380945 GATGGTTGGGGGCAGCCA 62.381 66.667 15.19 0.00 39.71 4.75
423 424 4.387343 ATGGTTGGGGGCAGCCAG 62.387 66.667 15.19 0.00 38.80 4.85
438 439 4.093952 CAGCGGCGGCAAACAGAG 62.094 66.667 19.21 0.00 43.41 3.35
439 440 4.314440 AGCGGCGGCAAACAGAGA 62.314 61.111 19.21 0.00 43.41 3.10
440 441 3.127533 GCGGCGGCAAACAGAGAT 61.128 61.111 9.78 0.00 39.62 2.75
441 442 3.093278 CGGCGGCAAACAGAGATC 58.907 61.111 10.53 0.00 0.00 2.75
442 443 2.802667 CGGCGGCAAACAGAGATCG 61.803 63.158 10.53 0.00 0.00 3.69
443 444 1.741770 GGCGGCAAACAGAGATCGT 60.742 57.895 3.07 0.00 0.00 3.73
444 445 1.696832 GGCGGCAAACAGAGATCGTC 61.697 60.000 3.07 0.00 0.00 4.20
445 446 1.991430 CGGCAAACAGAGATCGTCG 59.009 57.895 0.00 0.00 0.00 5.12
446 447 1.413767 CGGCAAACAGAGATCGTCGG 61.414 60.000 0.00 0.00 0.00 4.79
447 448 1.084370 GGCAAACAGAGATCGTCGGG 61.084 60.000 0.00 0.00 0.00 5.14
448 449 0.108804 GCAAACAGAGATCGTCGGGA 60.109 55.000 0.00 0.00 0.00 5.14
449 450 1.914634 CAAACAGAGATCGTCGGGAG 58.085 55.000 0.00 0.00 0.00 4.30
450 451 0.173708 AAACAGAGATCGTCGGGAGC 59.826 55.000 0.00 0.00 0.00 4.70
451 452 0.965866 AACAGAGATCGTCGGGAGCA 60.966 55.000 0.00 0.00 32.03 4.26
452 453 1.358402 CAGAGATCGTCGGGAGCAG 59.642 63.158 0.00 0.00 32.03 4.24
453 454 2.026879 GAGATCGTCGGGAGCAGC 59.973 66.667 0.00 0.00 32.03 5.25
454 455 3.815569 GAGATCGTCGGGAGCAGCG 62.816 68.421 0.00 0.00 32.03 5.18
459 460 3.567797 GTCGGGAGCAGCGCAATC 61.568 66.667 11.47 3.78 0.00 2.67
460 461 4.081185 TCGGGAGCAGCGCAATCA 62.081 61.111 11.47 0.00 0.00 2.57
461 462 3.570638 CGGGAGCAGCGCAATCAG 61.571 66.667 11.47 0.00 0.00 2.90
462 463 2.124983 GGGAGCAGCGCAATCAGA 60.125 61.111 11.47 0.00 0.00 3.27
463 464 1.525535 GGGAGCAGCGCAATCAGAT 60.526 57.895 11.47 0.00 0.00 2.90
464 465 1.647629 GGAGCAGCGCAATCAGATG 59.352 57.895 11.47 0.00 0.00 2.90
465 466 1.647629 GAGCAGCGCAATCAGATGG 59.352 57.895 11.47 0.00 0.00 3.51
466 467 1.077930 AGCAGCGCAATCAGATGGT 60.078 52.632 11.47 0.00 0.00 3.55
467 468 0.679002 AGCAGCGCAATCAGATGGTT 60.679 50.000 11.47 0.00 31.29 3.67
468 469 0.524816 GCAGCGCAATCAGATGGTTG 60.525 55.000 11.47 1.33 0.00 3.77
469 470 0.099968 CAGCGCAATCAGATGGTTGG 59.900 55.000 11.47 0.03 0.00 3.77
470 471 1.033746 AGCGCAATCAGATGGTTGGG 61.034 55.000 11.47 16.18 40.14 4.12
471 472 1.315257 GCGCAATCAGATGGTTGGGT 61.315 55.000 19.99 0.00 39.57 4.51
472 473 1.176527 CGCAATCAGATGGTTGGGTT 58.823 50.000 13.17 0.00 34.66 4.11
473 474 1.135315 CGCAATCAGATGGTTGGGTTG 60.135 52.381 13.17 0.00 34.66 3.77
474 475 2.170166 GCAATCAGATGGTTGGGTTGA 58.830 47.619 7.87 0.00 0.00 3.18
475 476 2.094545 GCAATCAGATGGTTGGGTTGAC 60.095 50.000 7.87 0.00 0.00 3.18
476 477 2.493278 CAATCAGATGGTTGGGTTGACC 59.507 50.000 0.00 0.00 40.81 4.02
486 487 4.948257 GGTTGACCCGTATGACCC 57.052 61.111 0.00 0.00 0.00 4.46
487 488 1.984817 GGTTGACCCGTATGACCCA 59.015 57.895 0.00 0.00 0.00 4.51
488 489 0.544697 GGTTGACCCGTATGACCCAT 59.455 55.000 0.00 0.00 0.00 4.00
489 490 1.474498 GGTTGACCCGTATGACCCATC 60.474 57.143 0.00 0.00 0.00 3.51
490 491 0.462375 TTGACCCGTATGACCCATCG 59.538 55.000 0.00 0.00 0.00 3.84
491 492 1.366366 GACCCGTATGACCCATCGG 59.634 63.158 0.00 0.00 42.22 4.18
520 521 3.991051 CCGACTGCACTGACCCGT 61.991 66.667 0.00 0.00 0.00 5.28
521 522 2.029073 CGACTGCACTGACCCGTT 59.971 61.111 0.00 0.00 0.00 4.44
522 523 1.594293 CGACTGCACTGACCCGTTT 60.594 57.895 0.00 0.00 0.00 3.60
523 524 0.319211 CGACTGCACTGACCCGTTTA 60.319 55.000 0.00 0.00 0.00 2.01
524 525 1.671850 CGACTGCACTGACCCGTTTAT 60.672 52.381 0.00 0.00 0.00 1.40
525 526 1.732259 GACTGCACTGACCCGTTTATG 59.268 52.381 0.00 0.00 0.00 1.90
526 527 1.346395 ACTGCACTGACCCGTTTATGA 59.654 47.619 0.00 0.00 0.00 2.15
527 528 1.732259 CTGCACTGACCCGTTTATGAC 59.268 52.381 0.00 0.00 0.00 3.06
528 529 1.346395 TGCACTGACCCGTTTATGACT 59.654 47.619 0.00 0.00 0.00 3.41
529 530 2.000447 GCACTGACCCGTTTATGACTC 59.000 52.381 0.00 0.00 0.00 3.36
530 531 2.611971 GCACTGACCCGTTTATGACTCA 60.612 50.000 0.00 0.00 0.00 3.41
531 532 3.659786 CACTGACCCGTTTATGACTCAA 58.340 45.455 0.00 0.00 0.00 3.02
532 533 3.679980 CACTGACCCGTTTATGACTCAAG 59.320 47.826 0.00 0.00 0.00 3.02
533 534 3.262420 CTGACCCGTTTATGACTCAAGG 58.738 50.000 0.00 0.00 0.00 3.61
534 535 2.007608 GACCCGTTTATGACTCAAGGC 58.992 52.381 0.00 0.00 0.00 4.35
535 536 1.339727 ACCCGTTTATGACTCAAGGCC 60.340 52.381 0.00 0.00 0.00 5.19
536 537 1.339631 CCCGTTTATGACTCAAGGCCA 60.340 52.381 5.01 0.00 0.00 5.36
537 538 2.432444 CCGTTTATGACTCAAGGCCAA 58.568 47.619 5.01 0.00 0.00 4.52
538 539 2.161609 CCGTTTATGACTCAAGGCCAAC 59.838 50.000 5.01 0.00 0.00 3.77
539 540 2.161609 CGTTTATGACTCAAGGCCAACC 59.838 50.000 5.01 0.00 0.00 3.77
540 541 2.492088 GTTTATGACTCAAGGCCAACCC 59.508 50.000 5.01 0.00 36.11 4.11
541 542 1.367346 TATGACTCAAGGCCAACCCA 58.633 50.000 5.01 0.00 36.11 4.51
542 543 0.251341 ATGACTCAAGGCCAACCCAC 60.251 55.000 5.01 0.00 36.11 4.61
543 544 1.603739 GACTCAAGGCCAACCCACC 60.604 63.158 5.01 0.00 36.11 4.61
544 545 2.069165 GACTCAAGGCCAACCCACCT 62.069 60.000 5.01 0.00 38.14 4.00
545 546 1.604593 CTCAAGGCCAACCCACCTG 60.605 63.158 5.01 0.00 36.07 4.00
546 547 2.601367 CAAGGCCAACCCACCTGG 60.601 66.667 5.01 0.00 36.07 4.45
551 552 2.118076 CCAACCCACCTGGCACAT 59.882 61.111 0.00 0.00 38.20 3.21
552 553 1.533753 CCAACCCACCTGGCACATT 60.534 57.895 0.00 0.00 38.20 2.71
553 554 1.667151 CAACCCACCTGGCACATTG 59.333 57.895 0.00 0.00 38.20 2.82
554 555 1.533753 AACCCACCTGGCACATTGG 60.534 57.895 0.00 0.00 40.10 3.16
555 556 3.384532 CCCACCTGGCACATTGGC 61.385 66.667 0.00 0.00 39.35 4.52
563 564 3.909662 GCACATTGGCCTCGACAT 58.090 55.556 3.32 0.00 0.00 3.06
564 565 2.183409 GCACATTGGCCTCGACATT 58.817 52.632 3.32 0.00 0.00 2.71
565 566 0.527565 GCACATTGGCCTCGACATTT 59.472 50.000 3.32 0.00 0.00 2.32
566 567 1.067635 GCACATTGGCCTCGACATTTT 60.068 47.619 3.32 0.00 0.00 1.82
567 568 2.598589 CACATTGGCCTCGACATTTTG 58.401 47.619 3.32 0.00 0.00 2.44
568 569 1.545582 ACATTGGCCTCGACATTTTGG 59.454 47.619 3.32 0.00 0.00 3.28
569 570 1.135024 CATTGGCCTCGACATTTTGGG 60.135 52.381 3.32 0.00 0.00 4.12
570 571 1.531739 TTGGCCTCGACATTTTGGGC 61.532 55.000 3.32 5.82 44.16 5.36
571 572 2.885113 GCCTCGACATTTTGGGCC 59.115 61.111 0.00 0.00 37.12 5.80
572 573 3.051392 GCCTCGACATTTTGGGCCG 62.051 63.158 0.00 0.00 37.12 6.13
573 574 2.406616 CCTCGACATTTTGGGCCGG 61.407 63.158 0.00 0.00 0.00 6.13
574 575 2.360600 TCGACATTTTGGGCCGGG 60.361 61.111 2.18 0.00 0.00 5.73
575 576 2.675075 CGACATTTTGGGCCGGGT 60.675 61.111 2.18 0.00 0.00 5.28
576 577 2.696759 CGACATTTTGGGCCGGGTC 61.697 63.158 2.18 0.00 0.00 4.46
577 578 1.605165 GACATTTTGGGCCGGGTCA 60.605 57.895 2.18 0.00 0.00 4.02
578 579 1.595093 GACATTTTGGGCCGGGTCAG 61.595 60.000 2.18 0.00 0.00 3.51
579 580 1.606313 CATTTTGGGCCGGGTCAGT 60.606 57.895 2.18 0.00 0.00 3.41
580 581 1.606313 ATTTTGGGCCGGGTCAGTG 60.606 57.895 2.18 0.00 0.00 3.66
581 582 2.075355 ATTTTGGGCCGGGTCAGTGA 62.075 55.000 2.18 0.00 0.00 3.41
582 583 2.969300 TTTTGGGCCGGGTCAGTGAC 62.969 60.000 15.24 15.24 0.00 3.67
610 611 4.815108 GACCCGGCCCATTCCCAC 62.815 72.222 0.00 0.00 0.00 4.61
614 615 2.354729 CGGCCCATTCCCACTTGA 59.645 61.111 0.00 0.00 0.00 3.02
624 625 2.465860 TCCCACTTGACATACAACCG 57.534 50.000 0.00 0.00 34.56 4.44
651 652 7.473828 TGGTGAACCTTCCACTAGTAGTAGTG 61.474 46.154 25.08 25.08 44.73 2.74
696 697 2.096019 GCTTCCTCTTCTTTGTCGCTTG 60.096 50.000 0.00 0.00 0.00 4.01
712 713 0.885879 CTTGCTGAGCTGGCATTTGA 59.114 50.000 5.83 0.00 39.54 2.69
733 734 1.873270 ATCCGCACTCGCACACTACA 61.873 55.000 0.00 0.00 38.40 2.74
797 798 4.033709 CCTAGGAGAATTCCAAGGTCTCA 58.966 47.826 1.05 0.00 46.64 3.27
828 834 4.142315 CCAAGATCGCATTCCTGATTTTGT 60.142 41.667 5.22 0.00 35.85 2.83
1059 1065 4.619227 CTGCCGACCACCACCGTT 62.619 66.667 0.00 0.00 0.00 4.44
1627 1633 5.743398 CGTTATTATGCACTGGAAAATGGTG 59.257 40.000 0.00 0.00 0.00 4.17
1818 1828 6.852345 GCATTGTGAGCAACTTTTTATTTTGG 59.148 34.615 0.00 0.00 37.44 3.28
1865 1875 1.576356 GAATCCGGAGACATCAGCAC 58.424 55.000 11.34 0.00 0.00 4.40
1887 1897 1.469940 CGCTGTCTCCGCAATAAGTCT 60.470 52.381 0.00 0.00 0.00 3.24
1897 1907 2.012673 GCAATAAGTCTGGCAGGTCAG 58.987 52.381 15.73 0.00 36.17 3.51
1942 1960 4.539509 TTTATGTGTGTGTGTCGGTTTC 57.460 40.909 0.00 0.00 0.00 2.78
2116 2134 2.478894 GACGCCTTGAGAAATTTCACGA 59.521 45.455 19.99 12.45 0.00 4.35
2202 2220 5.751990 GGTGATGTTAAAGATCGTTCGGTAT 59.248 40.000 0.00 0.00 0.00 2.73
2300 2318 0.740868 CATGGCTCTGTACCGTGTGG 60.741 60.000 0.00 0.00 39.04 4.17
2432 2451 2.161012 ACGAGCTGTCAAATCTGCAATG 59.839 45.455 0.00 0.00 35.31 2.82
2635 2713 3.782889 AAAGTTCAAACTGACTGCACC 57.217 42.857 0.00 0.00 39.66 5.01
2685 2763 4.219070 TGAGAGGTGATGGCAAAAATCAAG 59.781 41.667 0.00 0.00 35.87 3.02
3026 3111 0.958382 GCACCACGGGATGCTGTTTA 60.958 55.000 0.00 0.00 38.84 2.01
3205 3290 1.448540 CGTCAAGAAGCTCGGCCAT 60.449 57.895 2.24 0.00 0.00 4.40
3234 3319 1.219124 GAGCCAGCAGATGAACCGA 59.781 57.895 0.00 0.00 0.00 4.69
3245 3330 2.372172 AGATGAACCGACCTTTCAACCT 59.628 45.455 0.00 0.00 36.57 3.50
3413 3498 7.706179 AGGTTTCTTTGTACATTTGTTGACATG 59.294 33.333 0.00 0.00 0.00 3.21
3436 3521 3.367992 TGATGTGTGTTGTCCATTTGC 57.632 42.857 0.00 0.00 0.00 3.68
3450 3535 2.278854 CATTTGCAAAATAAGCCCCCG 58.721 47.619 17.19 0.00 0.00 5.73
3460 3545 2.758852 TAAGCCCCCGTCTGGAACCT 62.759 60.000 0.00 0.00 37.49 3.50
3473 3558 4.640647 GTCTGGAACCTGTGAGTTTTTCTT 59.359 41.667 0.00 0.00 0.00 2.52
3510 3595 9.013229 AGCAATGAACTGTTTGATGTAAAGATA 57.987 29.630 0.00 0.00 0.00 1.98
3569 3654 2.694628 TCTGCCAAAAGATTTGCTGTGT 59.305 40.909 0.00 0.00 30.99 3.72
3570 3655 2.798283 CTGCCAAAAGATTTGCTGTGTG 59.202 45.455 0.00 0.00 0.00 3.82
3578 3663 0.235665 ATTTGCTGTGTGAAGCGTCG 59.764 50.000 0.00 0.00 46.65 5.12
3601 3686 6.535865 TCGTGCTACTTTGTTTTCTGAACTTA 59.464 34.615 0.00 0.00 0.00 2.24
3602 3687 7.064847 TCGTGCTACTTTGTTTTCTGAACTTAA 59.935 33.333 0.00 0.00 0.00 1.85
3603 3688 7.373441 CGTGCTACTTTGTTTTCTGAACTTAAG 59.627 37.037 0.00 0.00 0.00 1.85
3604 3689 7.644157 GTGCTACTTTGTTTTCTGAACTTAAGG 59.356 37.037 7.53 0.00 0.00 2.69
3605 3690 7.139392 GCTACTTTGTTTTCTGAACTTAAGGG 58.861 38.462 7.53 0.00 0.00 3.95
3606 3691 5.902681 ACTTTGTTTTCTGAACTTAAGGGC 58.097 37.500 7.53 0.00 0.00 5.19
3607 3692 4.929819 TTGTTTTCTGAACTTAAGGGCC 57.070 40.909 7.53 0.00 0.00 5.80
3608 3693 4.178956 TGTTTTCTGAACTTAAGGGCCT 57.821 40.909 0.00 0.00 0.00 5.19
3609 3694 3.888930 TGTTTTCTGAACTTAAGGGCCTG 59.111 43.478 6.92 0.00 0.00 4.85
3610 3695 3.876309 TTTCTGAACTTAAGGGCCTGT 57.124 42.857 6.92 0.00 0.00 4.00
3611 3696 3.876309 TTCTGAACTTAAGGGCCTGTT 57.124 42.857 6.92 7.22 0.00 3.16
3612 3697 3.418684 TCTGAACTTAAGGGCCTGTTC 57.581 47.619 22.05 22.05 39.18 3.18
3613 3698 2.076863 CTGAACTTAAGGGCCTGTTCG 58.923 52.381 22.79 16.28 40.93 3.95
3614 3699 1.271163 TGAACTTAAGGGCCTGTTCGG 60.271 52.381 22.79 9.70 40.93 4.30
3615 3700 0.769247 AACTTAAGGGCCTGTTCGGT 59.231 50.000 6.92 0.00 34.25 4.69
3616 3701 0.769247 ACTTAAGGGCCTGTTCGGTT 59.231 50.000 6.92 0.00 34.25 4.44
3617 3702 1.980036 ACTTAAGGGCCTGTTCGGTTA 59.020 47.619 6.92 0.00 34.25 2.85
3618 3703 2.574824 ACTTAAGGGCCTGTTCGGTTAT 59.425 45.455 6.92 0.00 34.25 1.89
3619 3704 2.994186 TAAGGGCCTGTTCGGTTATC 57.006 50.000 6.92 0.00 34.25 1.75
3620 3705 0.255033 AAGGGCCTGTTCGGTTATCC 59.745 55.000 6.92 0.00 34.25 2.59
3621 3706 0.912487 AGGGCCTGTTCGGTTATCCA 60.912 55.000 4.50 0.00 34.25 3.41
3622 3707 0.746923 GGGCCTGTTCGGTTATCCAC 60.747 60.000 0.84 0.00 34.25 4.02
3623 3708 0.252197 GGCCTGTTCGGTTATCCACT 59.748 55.000 0.00 0.00 34.25 4.00
3624 3709 1.369625 GCCTGTTCGGTTATCCACTG 58.630 55.000 0.00 0.00 34.25 3.66
3625 3710 2.012051 GCCTGTTCGGTTATCCACTGG 61.012 57.143 0.00 0.00 34.29 4.00
3626 3711 1.369625 CTGTTCGGTTATCCACTGGC 58.630 55.000 0.00 0.00 31.75 4.85
3627 3712 0.981183 TGTTCGGTTATCCACTGGCT 59.019 50.000 0.00 0.00 31.75 4.75
3628 3713 1.066430 TGTTCGGTTATCCACTGGCTC 60.066 52.381 0.00 0.00 31.75 4.70
3629 3714 0.539986 TTCGGTTATCCACTGGCTCC 59.460 55.000 0.00 0.00 31.75 4.70
3630 3715 1.227263 CGGTTATCCACTGGCTCCG 60.227 63.158 0.00 0.00 0.00 4.63
3631 3716 1.905512 GGTTATCCACTGGCTCCGT 59.094 57.895 0.00 0.00 0.00 4.69
3632 3717 0.462047 GGTTATCCACTGGCTCCGTG 60.462 60.000 0.00 4.63 0.00 4.94
3633 3718 0.535335 GTTATCCACTGGCTCCGTGA 59.465 55.000 10.80 1.46 34.35 4.35
3634 3719 1.066430 GTTATCCACTGGCTCCGTGAA 60.066 52.381 10.80 0.00 34.35 3.18
3635 3720 1.271856 TATCCACTGGCTCCGTGAAA 58.728 50.000 10.80 2.40 34.35 2.69
3636 3721 0.620556 ATCCACTGGCTCCGTGAAAT 59.379 50.000 10.80 4.04 34.35 2.17
3637 3722 0.400213 TCCACTGGCTCCGTGAAATT 59.600 50.000 10.80 0.00 34.35 1.82
3638 3723 1.626321 TCCACTGGCTCCGTGAAATTA 59.374 47.619 10.80 0.00 34.35 1.40
3639 3724 1.737793 CCACTGGCTCCGTGAAATTAC 59.262 52.381 10.80 0.00 34.35 1.89
3640 3725 2.422597 CACTGGCTCCGTGAAATTACA 58.577 47.619 5.40 0.00 34.35 2.41
3641 3726 2.416547 CACTGGCTCCGTGAAATTACAG 59.583 50.000 5.40 0.00 34.35 2.74
3642 3727 2.009774 CTGGCTCCGTGAAATTACAGG 58.990 52.381 0.00 0.00 0.00 4.00
3643 3728 1.339631 TGGCTCCGTGAAATTACAGGG 60.340 52.381 0.00 0.00 44.18 4.45
3648 3733 4.137116 TCCGTGAAATTACAGGGATCTG 57.863 45.455 0.00 0.00 45.68 2.90
3649 3734 2.614057 CCGTGAAATTACAGGGATCTGC 59.386 50.000 0.00 0.00 45.20 4.26
3650 3735 2.285220 CGTGAAATTACAGGGATCTGCG 59.715 50.000 0.00 0.00 44.59 5.18
3651 3736 2.614057 GTGAAATTACAGGGATCTGCGG 59.386 50.000 0.00 0.00 44.59 5.69
3652 3737 2.503765 TGAAATTACAGGGATCTGCGGA 59.496 45.455 0.00 0.00 44.59 5.54
3653 3738 2.918712 AATTACAGGGATCTGCGGAG 57.081 50.000 0.00 0.00 44.59 4.63
3668 3753 0.099436 CGGAGCACCTATTTTGCAGC 59.901 55.000 0.00 0.00 42.83 5.25
3669 3754 1.467920 GGAGCACCTATTTTGCAGCT 58.532 50.000 0.00 0.00 42.83 4.24
3670 3755 1.403323 GGAGCACCTATTTTGCAGCTC 59.597 52.381 10.85 10.85 45.65 4.09
3671 3756 1.403323 GAGCACCTATTTTGCAGCTCC 59.597 52.381 8.67 0.00 42.83 4.70
3672 3757 0.099436 GCACCTATTTTGCAGCTCCG 59.901 55.000 0.00 0.00 39.93 4.63
3673 3758 0.099436 CACCTATTTTGCAGCTCCGC 59.901 55.000 0.00 0.00 0.00 5.54
3674 3759 0.035056 ACCTATTTTGCAGCTCCGCT 60.035 50.000 0.00 0.00 40.77 5.52
3675 3760 1.209504 ACCTATTTTGCAGCTCCGCTA 59.790 47.619 0.00 0.00 36.40 4.26
3676 3761 2.288666 CCTATTTTGCAGCTCCGCTAA 58.711 47.619 0.00 0.00 36.40 3.09
3677 3762 2.880890 CCTATTTTGCAGCTCCGCTAAT 59.119 45.455 0.00 1.15 36.40 1.73
3678 3763 3.316308 CCTATTTTGCAGCTCCGCTAATT 59.684 43.478 0.00 0.00 36.40 1.40
3679 3764 3.874392 ATTTTGCAGCTCCGCTAATTT 57.126 38.095 0.00 0.00 36.40 1.82
3680 3765 4.981806 ATTTTGCAGCTCCGCTAATTTA 57.018 36.364 0.00 0.00 36.40 1.40
3681 3766 4.355543 TTTTGCAGCTCCGCTAATTTAG 57.644 40.909 0.00 0.00 36.40 1.85
3718 3803 4.544689 CGCGAGCGGAGTCTGGAG 62.545 72.222 9.90 0.00 35.56 3.86
3719 3804 3.444805 GCGAGCGGAGTCTGGAGT 61.445 66.667 0.05 0.00 0.00 3.85
3720 3805 2.487428 CGAGCGGAGTCTGGAGTG 59.513 66.667 0.05 0.00 0.00 3.51
3721 3806 2.888863 GAGCGGAGTCTGGAGTGG 59.111 66.667 0.05 0.00 0.00 4.00
3722 3807 1.679305 GAGCGGAGTCTGGAGTGGA 60.679 63.158 0.05 0.00 0.00 4.02
3723 3808 1.662438 GAGCGGAGTCTGGAGTGGAG 61.662 65.000 0.05 0.00 0.00 3.86
3724 3809 2.716017 GCGGAGTCTGGAGTGGAGG 61.716 68.421 0.05 0.00 0.00 4.30
3725 3810 2.055042 CGGAGTCTGGAGTGGAGGG 61.055 68.421 0.00 0.00 0.00 4.30
3726 3811 1.388531 GGAGTCTGGAGTGGAGGGA 59.611 63.158 0.00 0.00 0.00 4.20
3727 3812 0.973496 GGAGTCTGGAGTGGAGGGAC 60.973 65.000 0.00 0.00 0.00 4.46
3739 3824 4.115270 AGGGACTCCGAACACTCC 57.885 61.111 0.00 0.00 38.33 3.85
3740 3825 1.609794 AGGGACTCCGAACACTCCC 60.610 63.158 0.00 0.00 42.66 4.30
3741 3826 1.609794 GGGACTCCGAACACTCCCT 60.610 63.158 0.00 0.00 39.59 4.20
3782 3867 6.528014 TGTTTTTCGTATGAAGAGCGTTTA 57.472 33.333 0.00 0.00 35.06 2.01
3834 4080 8.737168 TTTCCATTGAATACTTACATCTCTGG 57.263 34.615 0.00 0.00 0.00 3.86
3932 4180 8.810041 ACTGTTATAGAGGGGGTATTTTATACG 58.190 37.037 0.00 0.00 0.00 3.06
3933 4181 8.954834 TGTTATAGAGGGGGTATTTTATACGA 57.045 34.615 0.00 0.00 0.00 3.43
3934 4182 9.028284 TGTTATAGAGGGGGTATTTTATACGAG 57.972 37.037 0.00 0.00 0.00 4.18
3936 4184 9.605951 TTATAGAGGGGGTATTTTATACGAGTT 57.394 33.333 0.00 0.00 0.00 3.01
3938 4186 6.141790 AGAGGGGGTATTTTATACGAGTTCT 58.858 40.000 0.00 0.00 0.00 3.01
3967 4215 6.252599 ACACATCATGGTCTACAATGGTAT 57.747 37.500 0.00 0.00 0.00 2.73
4006 4306 1.227383 GGATCGCCATCCCCTGTTT 59.773 57.895 0.00 0.00 42.91 2.83
4021 4321 5.654650 TCCCCTGTTTCATTAAACGCAATAT 59.345 36.000 0.00 0.00 46.63 1.28
4036 4336 2.932614 GCAATATGTCTCAGACAACGCT 59.067 45.455 12.63 0.00 45.96 5.07
4040 4340 0.317854 TGTCTCAGACAACGCTGACG 60.318 55.000 4.55 0.00 39.78 4.35
4043 4343 1.330779 CTCAGACAACGCTGACGACG 61.331 60.000 0.00 0.00 43.93 5.12
4106 4407 5.118729 TCCAGGGAAGTTCAGTTTTAACA 57.881 39.130 5.01 0.00 0.00 2.41
4157 4458 0.455633 CGCAGGCAAGCTGAAATGAC 60.456 55.000 0.00 0.00 0.00 3.06
4162 4463 3.693085 CAGGCAAGCTGAAATGACTACAT 59.307 43.478 0.00 0.00 31.64 2.29
4202 4503 0.978146 ACCACTGGATCGAGGGAAGG 60.978 60.000 8.81 7.30 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.679837 TCGACCACCGATACAACTCTAC 59.320 50.000 0.00 0.00 43.23 2.59
2 3 1.830279 TCGACCACCGATACAACTCT 58.170 50.000 0.00 0.00 43.23 3.24
12 13 2.479730 CCTCAAGTTCTATCGACCACCG 60.480 54.545 0.00 0.00 40.25 4.94
13 14 2.159085 CCCTCAAGTTCTATCGACCACC 60.159 54.545 0.00 0.00 0.00 4.61
14 15 2.758979 TCCCTCAAGTTCTATCGACCAC 59.241 50.000 0.00 0.00 0.00 4.16
15 16 3.095912 TCCCTCAAGTTCTATCGACCA 57.904 47.619 0.00 0.00 0.00 4.02
16 17 4.674281 ATTCCCTCAAGTTCTATCGACC 57.326 45.455 0.00 0.00 0.00 4.79
17 18 7.711339 ACAAATATTCCCTCAAGTTCTATCGAC 59.289 37.037 0.00 0.00 0.00 4.20
18 19 7.792032 ACAAATATTCCCTCAAGTTCTATCGA 58.208 34.615 0.00 0.00 0.00 3.59
19 20 8.438676 AACAAATATTCCCTCAAGTTCTATCG 57.561 34.615 0.00 0.00 0.00 2.92
20 21 9.620259 AGAACAAATATTCCCTCAAGTTCTATC 57.380 33.333 0.00 0.00 41.64 2.08
22 23 9.886132 GTAGAACAAATATTCCCTCAAGTTCTA 57.114 33.333 0.00 0.00 42.83 2.10
23 24 7.829706 GGTAGAACAAATATTCCCTCAAGTTCT 59.170 37.037 0.00 0.00 44.45 3.01
24 25 7.829706 AGGTAGAACAAATATTCCCTCAAGTTC 59.170 37.037 0.00 0.00 35.58 3.01
25 26 7.699878 AGGTAGAACAAATATTCCCTCAAGTT 58.300 34.615 0.00 0.00 0.00 2.66
26 27 7.272144 AGGTAGAACAAATATTCCCTCAAGT 57.728 36.000 0.00 0.00 0.00 3.16
27 28 8.581253 AAAGGTAGAACAAATATTCCCTCAAG 57.419 34.615 0.00 0.00 0.00 3.02
28 29 9.681062 CTAAAGGTAGAACAAATATTCCCTCAA 57.319 33.333 0.00 0.00 0.00 3.02
29 30 7.773690 GCTAAAGGTAGAACAAATATTCCCTCA 59.226 37.037 0.00 0.00 0.00 3.86
30 31 7.993758 AGCTAAAGGTAGAACAAATATTCCCTC 59.006 37.037 0.00 0.00 0.00 4.30
31 32 7.873195 AGCTAAAGGTAGAACAAATATTCCCT 58.127 34.615 0.00 0.00 0.00 4.20
32 33 8.521170 AAGCTAAAGGTAGAACAAATATTCCC 57.479 34.615 0.00 0.00 0.00 3.97
33 34 9.397280 AGAAGCTAAAGGTAGAACAAATATTCC 57.603 33.333 0.00 0.00 0.00 3.01
35 36 9.099454 CGAGAAGCTAAAGGTAGAACAAATATT 57.901 33.333 0.00 0.00 0.00 1.28
36 37 8.258708 ACGAGAAGCTAAAGGTAGAACAAATAT 58.741 33.333 0.00 0.00 0.00 1.28
37 38 7.609056 ACGAGAAGCTAAAGGTAGAACAAATA 58.391 34.615 0.00 0.00 0.00 1.40
38 39 6.465084 ACGAGAAGCTAAAGGTAGAACAAAT 58.535 36.000 0.00 0.00 0.00 2.32
39 40 5.850614 ACGAGAAGCTAAAGGTAGAACAAA 58.149 37.500 0.00 0.00 0.00 2.83
40 41 5.464030 ACGAGAAGCTAAAGGTAGAACAA 57.536 39.130 0.00 0.00 0.00 2.83
41 42 5.227908 CAACGAGAAGCTAAAGGTAGAACA 58.772 41.667 0.00 0.00 0.00 3.18
42 43 4.626172 CCAACGAGAAGCTAAAGGTAGAAC 59.374 45.833 0.00 0.00 0.00 3.01
43 44 4.322499 CCCAACGAGAAGCTAAAGGTAGAA 60.322 45.833 0.00 0.00 0.00 2.10
44 45 3.194968 CCCAACGAGAAGCTAAAGGTAGA 59.805 47.826 0.00 0.00 0.00 2.59
45 46 3.056035 ACCCAACGAGAAGCTAAAGGTAG 60.056 47.826 0.00 0.00 0.00 3.18
46 47 2.901839 ACCCAACGAGAAGCTAAAGGTA 59.098 45.455 0.00 0.00 0.00 3.08
47 48 1.697982 ACCCAACGAGAAGCTAAAGGT 59.302 47.619 0.00 0.00 0.00 3.50
48 49 2.474410 ACCCAACGAGAAGCTAAAGG 57.526 50.000 0.00 0.00 0.00 3.11
49 50 2.412089 CGAACCCAACGAGAAGCTAAAG 59.588 50.000 0.00 0.00 0.00 1.85
50 51 2.036217 TCGAACCCAACGAGAAGCTAAA 59.964 45.455 0.00 0.00 34.85 1.85
51 52 1.614903 TCGAACCCAACGAGAAGCTAA 59.385 47.619 0.00 0.00 34.85 3.09
52 53 1.068055 GTCGAACCCAACGAGAAGCTA 60.068 52.381 0.00 0.00 40.37 3.32
53 54 0.319641 GTCGAACCCAACGAGAAGCT 60.320 55.000 0.00 0.00 40.37 3.74
54 55 0.599204 TGTCGAACCCAACGAGAAGC 60.599 55.000 0.00 0.00 40.37 3.86
55 56 1.137513 GTGTCGAACCCAACGAGAAG 58.862 55.000 0.00 0.00 40.37 2.85
56 57 0.748450 AGTGTCGAACCCAACGAGAA 59.252 50.000 0.00 0.00 40.37 2.87
57 58 0.313043 GAGTGTCGAACCCAACGAGA 59.687 55.000 0.00 0.00 40.37 4.04
58 59 0.314302 AGAGTGTCGAACCCAACGAG 59.686 55.000 0.00 0.00 40.37 4.18
59 60 0.748450 AAGAGTGTCGAACCCAACGA 59.252 50.000 0.00 0.00 37.43 3.85
60 61 2.056577 GTAAGAGTGTCGAACCCAACG 58.943 52.381 0.00 0.00 0.00 4.10
61 62 3.382048 AGTAAGAGTGTCGAACCCAAC 57.618 47.619 0.00 0.00 0.00 3.77
62 63 5.620654 CGATAAGTAAGAGTGTCGAACCCAA 60.621 44.000 0.00 0.00 0.00 4.12
63 64 4.142534 CGATAAGTAAGAGTGTCGAACCCA 60.143 45.833 0.00 0.00 0.00 4.51
64 65 4.095483 TCGATAAGTAAGAGTGTCGAACCC 59.905 45.833 0.00 0.00 35.48 4.11
65 66 5.227238 TCGATAAGTAAGAGTGTCGAACC 57.773 43.478 0.00 0.00 35.48 3.62
66 67 7.020010 TCTTTCGATAAGTAAGAGTGTCGAAC 58.980 38.462 7.42 0.00 44.53 3.95
67 68 7.137490 TCTTTCGATAAGTAAGAGTGTCGAA 57.863 36.000 4.17 4.17 43.60 3.71
68 69 6.183360 CCTCTTTCGATAAGTAAGAGTGTCGA 60.183 42.308 18.03 0.00 46.54 4.20
69 70 5.966503 CCTCTTTCGATAAGTAAGAGTGTCG 59.033 44.000 18.03 4.16 46.54 4.35
70 71 5.744819 GCCTCTTTCGATAAGTAAGAGTGTC 59.255 44.000 18.03 7.30 46.54 3.67
71 72 5.419471 AGCCTCTTTCGATAAGTAAGAGTGT 59.581 40.000 18.03 6.31 46.54 3.55
72 73 5.897050 AGCCTCTTTCGATAAGTAAGAGTG 58.103 41.667 18.03 12.41 46.54 3.51
73 74 6.602406 TGTAGCCTCTTTCGATAAGTAAGAGT 59.398 38.462 18.03 7.32 46.54 3.24
75 76 7.400599 TTGTAGCCTCTTTCGATAAGTAAGA 57.599 36.000 0.00 0.00 35.42 2.10
76 77 8.543774 CAATTGTAGCCTCTTTCGATAAGTAAG 58.456 37.037 0.00 0.00 0.00 2.34
77 78 8.255206 TCAATTGTAGCCTCTTTCGATAAGTAA 58.745 33.333 5.13 0.00 0.00 2.24
78 79 7.778083 TCAATTGTAGCCTCTTTCGATAAGTA 58.222 34.615 5.13 0.00 0.00 2.24
79 80 6.640518 TCAATTGTAGCCTCTTTCGATAAGT 58.359 36.000 5.13 0.00 0.00 2.24
80 81 7.095439 GGATCAATTGTAGCCTCTTTCGATAAG 60.095 40.741 5.13 0.00 0.00 1.73
81 82 6.706270 GGATCAATTGTAGCCTCTTTCGATAA 59.294 38.462 5.13 0.00 0.00 1.75
82 83 6.223852 GGATCAATTGTAGCCTCTTTCGATA 58.776 40.000 5.13 0.00 0.00 2.92
83 84 5.059833 GGATCAATTGTAGCCTCTTTCGAT 58.940 41.667 5.13 0.00 0.00 3.59
84 85 4.442706 GGATCAATTGTAGCCTCTTTCGA 58.557 43.478 5.13 0.00 0.00 3.71
85 86 3.561725 GGGATCAATTGTAGCCTCTTTCG 59.438 47.826 5.13 0.00 0.00 3.46
86 87 3.885901 GGGGATCAATTGTAGCCTCTTTC 59.114 47.826 5.13 0.00 0.00 2.62
87 88 3.529319 AGGGGATCAATTGTAGCCTCTTT 59.471 43.478 5.13 0.00 0.00 2.52
88 89 3.126453 AGGGGATCAATTGTAGCCTCTT 58.874 45.455 5.13 0.00 0.00 2.85
89 90 2.781667 AGGGGATCAATTGTAGCCTCT 58.218 47.619 5.13 7.01 0.00 3.69
90 91 4.706842 TTAGGGGATCAATTGTAGCCTC 57.293 45.455 5.13 4.74 0.00 4.70
91 92 5.852250 AGTATTAGGGGATCAATTGTAGCCT 59.148 40.000 5.13 0.00 0.00 4.58
92 93 6.128138 AGTATTAGGGGATCAATTGTAGCC 57.872 41.667 5.13 4.61 0.00 3.93
93 94 6.998673 ACAAGTATTAGGGGATCAATTGTAGC 59.001 38.462 5.13 0.00 0.00 3.58
94 95 7.445402 CCACAAGTATTAGGGGATCAATTGTAG 59.555 40.741 5.13 0.00 0.00 2.74
95 96 7.287061 CCACAAGTATTAGGGGATCAATTGTA 58.713 38.462 5.13 0.00 0.00 2.41
96 97 6.129179 CCACAAGTATTAGGGGATCAATTGT 58.871 40.000 5.13 0.00 0.00 2.71
97 98 5.536161 CCCACAAGTATTAGGGGATCAATTG 59.464 44.000 0.00 0.00 41.72 2.32
98 99 5.195756 ACCCACAAGTATTAGGGGATCAATT 59.804 40.000 1.34 0.00 44.43 2.32
99 100 4.731929 ACCCACAAGTATTAGGGGATCAAT 59.268 41.667 1.34 0.00 44.43 2.57
100 101 4.116113 ACCCACAAGTATTAGGGGATCAA 58.884 43.478 1.34 0.00 44.43 2.57
101 102 3.743132 ACCCACAAGTATTAGGGGATCA 58.257 45.455 1.34 0.00 44.43 2.92
102 103 4.790718 AACCCACAAGTATTAGGGGATC 57.209 45.455 1.34 0.00 44.43 3.36
103 104 5.914716 TGATAACCCACAAGTATTAGGGGAT 59.085 40.000 1.34 0.00 44.43 3.85
104 105 5.290335 TGATAACCCACAAGTATTAGGGGA 58.710 41.667 1.34 0.00 44.43 4.81
105 106 5.621193 CTGATAACCCACAAGTATTAGGGG 58.379 45.833 0.00 0.00 44.43 4.79
106 107 5.063880 GCTGATAACCCACAAGTATTAGGG 58.936 45.833 0.00 0.00 45.32 3.53
107 108 5.930135 AGCTGATAACCCACAAGTATTAGG 58.070 41.667 0.00 0.00 0.00 2.69
108 109 6.929606 GGTAGCTGATAACCCACAAGTATTAG 59.070 42.308 0.00 0.00 0.00 1.73
109 110 6.384595 TGGTAGCTGATAACCCACAAGTATTA 59.615 38.462 0.00 0.00 34.69 0.98
110 111 5.190925 TGGTAGCTGATAACCCACAAGTATT 59.809 40.000 0.00 0.00 34.69 1.89
111 112 4.719773 TGGTAGCTGATAACCCACAAGTAT 59.280 41.667 0.00 0.00 34.69 2.12
112 113 4.081309 GTGGTAGCTGATAACCCACAAGTA 60.081 45.833 7.58 0.00 43.96 2.24
113 114 2.910319 TGGTAGCTGATAACCCACAAGT 59.090 45.455 0.00 0.00 34.69 3.16
114 115 3.270877 GTGGTAGCTGATAACCCACAAG 58.729 50.000 7.58 0.00 43.96 3.16
115 116 3.343941 GTGGTAGCTGATAACCCACAA 57.656 47.619 7.58 0.00 43.96 3.33
117 118 2.027561 TGTGTGGTAGCTGATAACCCAC 60.028 50.000 13.73 13.73 44.61 4.61
118 119 2.261729 TGTGTGGTAGCTGATAACCCA 58.738 47.619 0.00 0.00 34.69 4.51
119 120 3.118408 TGATGTGTGGTAGCTGATAACCC 60.118 47.826 0.00 0.00 34.69 4.11
120 121 3.871594 GTGATGTGTGGTAGCTGATAACC 59.128 47.826 0.00 0.00 36.24 2.85
121 122 4.568359 CAGTGATGTGTGGTAGCTGATAAC 59.432 45.833 0.00 0.00 0.00 1.89
122 123 4.466015 TCAGTGATGTGTGGTAGCTGATAA 59.534 41.667 0.00 0.00 0.00 1.75
123 124 4.023291 TCAGTGATGTGTGGTAGCTGATA 58.977 43.478 0.00 0.00 0.00 2.15
124 125 2.833943 TCAGTGATGTGTGGTAGCTGAT 59.166 45.455 0.00 0.00 0.00 2.90
125 126 2.029020 GTCAGTGATGTGTGGTAGCTGA 60.029 50.000 0.00 0.00 0.00 4.26
126 127 2.341257 GTCAGTGATGTGTGGTAGCTG 58.659 52.381 0.00 0.00 0.00 4.24
127 128 1.276421 GGTCAGTGATGTGTGGTAGCT 59.724 52.381 0.00 0.00 0.00 3.32
128 129 1.001974 TGGTCAGTGATGTGTGGTAGC 59.998 52.381 0.00 0.00 0.00 3.58
129 130 3.006859 TCTTGGTCAGTGATGTGTGGTAG 59.993 47.826 0.00 0.00 0.00 3.18
130 131 2.969262 TCTTGGTCAGTGATGTGTGGTA 59.031 45.455 0.00 0.00 0.00 3.25
131 132 1.768275 TCTTGGTCAGTGATGTGTGGT 59.232 47.619 0.00 0.00 0.00 4.16
132 133 2.549064 TCTTGGTCAGTGATGTGTGG 57.451 50.000 0.00 0.00 0.00 4.17
133 134 4.129380 TCTTTCTTGGTCAGTGATGTGTG 58.871 43.478 0.00 0.00 0.00 3.82
134 135 4.422073 TCTTTCTTGGTCAGTGATGTGT 57.578 40.909 0.00 0.00 0.00 3.72
135 136 5.506317 GGTTTCTTTCTTGGTCAGTGATGTG 60.506 44.000 0.00 0.00 0.00 3.21
136 137 4.580580 GGTTTCTTTCTTGGTCAGTGATGT 59.419 41.667 0.00 0.00 0.00 3.06
137 138 4.580167 TGGTTTCTTTCTTGGTCAGTGATG 59.420 41.667 0.00 0.00 0.00 3.07
138 139 4.792068 TGGTTTCTTTCTTGGTCAGTGAT 58.208 39.130 0.00 0.00 0.00 3.06
139 140 4.199310 CTGGTTTCTTTCTTGGTCAGTGA 58.801 43.478 0.00 0.00 0.00 3.41
140 141 3.316308 CCTGGTTTCTTTCTTGGTCAGTG 59.684 47.826 0.00 0.00 0.00 3.66
141 142 3.202151 TCCTGGTTTCTTTCTTGGTCAGT 59.798 43.478 0.00 0.00 0.00 3.41
142 143 3.820557 TCCTGGTTTCTTTCTTGGTCAG 58.179 45.455 0.00 0.00 0.00 3.51
143 144 3.943671 TCCTGGTTTCTTTCTTGGTCA 57.056 42.857 0.00 0.00 0.00 4.02
144 145 4.021981 CCAATCCTGGTTTCTTTCTTGGTC 60.022 45.833 0.00 0.00 38.00 4.02
145 146 3.897505 CCAATCCTGGTTTCTTTCTTGGT 59.102 43.478 0.00 0.00 38.00 3.67
146 147 3.306294 GCCAATCCTGGTTTCTTTCTTGG 60.306 47.826 0.00 0.00 45.53 3.61
147 148 3.612479 CGCCAATCCTGGTTTCTTTCTTG 60.612 47.826 0.00 0.00 45.53 3.02
148 149 2.558359 CGCCAATCCTGGTTTCTTTCTT 59.442 45.455 0.00 0.00 45.53 2.52
149 150 2.162681 CGCCAATCCTGGTTTCTTTCT 58.837 47.619 0.00 0.00 45.53 2.52
150 151 1.402852 GCGCCAATCCTGGTTTCTTTC 60.403 52.381 0.00 0.00 45.53 2.62
151 152 0.603065 GCGCCAATCCTGGTTTCTTT 59.397 50.000 0.00 0.00 45.53 2.52
152 153 0.251341 AGCGCCAATCCTGGTTTCTT 60.251 50.000 2.29 0.00 45.53 2.52
153 154 0.251341 AAGCGCCAATCCTGGTTTCT 60.251 50.000 2.29 0.00 45.53 2.52
154 155 0.171231 GAAGCGCCAATCCTGGTTTC 59.829 55.000 2.29 0.00 45.53 2.78
155 156 1.586154 CGAAGCGCCAATCCTGGTTT 61.586 55.000 2.29 0.00 45.53 3.27
156 157 2.040544 CGAAGCGCCAATCCTGGTT 61.041 57.895 2.29 0.00 45.53 3.67
157 158 2.436646 CGAAGCGCCAATCCTGGT 60.437 61.111 2.29 0.00 45.53 4.00
158 159 2.125147 TCGAAGCGCCAATCCTGG 60.125 61.111 2.29 0.00 46.65 4.45
159 160 2.817423 GCTCGAAGCGCCAATCCTG 61.817 63.158 2.29 0.00 28.33 3.86
160 161 2.512515 GCTCGAAGCGCCAATCCT 60.513 61.111 2.29 0.00 28.33 3.24
169 170 1.148759 GATCCCGTTCAGCTCGAAGC 61.149 60.000 0.00 0.00 42.84 3.86
170 171 0.457851 AGATCCCGTTCAGCTCGAAG 59.542 55.000 0.00 0.00 33.09 3.79
171 172 1.404391 GTAGATCCCGTTCAGCTCGAA 59.596 52.381 0.00 0.00 0.00 3.71
172 173 1.022735 GTAGATCCCGTTCAGCTCGA 58.977 55.000 0.00 0.00 0.00 4.04
173 174 0.317103 CGTAGATCCCGTTCAGCTCG 60.317 60.000 0.00 0.00 0.00 5.03
174 175 0.595310 GCGTAGATCCCGTTCAGCTC 60.595 60.000 4.55 0.00 0.00 4.09
175 176 1.038130 AGCGTAGATCCCGTTCAGCT 61.038 55.000 4.55 0.00 0.00 4.24
176 177 0.872021 CAGCGTAGATCCCGTTCAGC 60.872 60.000 4.55 0.00 0.00 4.26
177 178 0.249073 CCAGCGTAGATCCCGTTCAG 60.249 60.000 4.55 0.00 0.00 3.02
178 179 1.672854 CCCAGCGTAGATCCCGTTCA 61.673 60.000 4.55 0.00 0.00 3.18
179 180 1.067582 CCCAGCGTAGATCCCGTTC 59.932 63.158 4.55 0.00 0.00 3.95
180 181 0.974010 TTCCCAGCGTAGATCCCGTT 60.974 55.000 4.55 0.00 0.00 4.44
181 182 1.380785 TTCCCAGCGTAGATCCCGT 60.381 57.895 4.55 0.00 0.00 5.28
182 183 1.364171 CTTCCCAGCGTAGATCCCG 59.636 63.158 0.00 0.00 0.00 5.14
183 184 1.749033 CCTTCCCAGCGTAGATCCC 59.251 63.158 0.00 0.00 0.00 3.85
184 185 1.749033 CCCTTCCCAGCGTAGATCC 59.251 63.158 0.00 0.00 0.00 3.36
185 186 0.759436 TCCCCTTCCCAGCGTAGATC 60.759 60.000 0.00 0.00 0.00 2.75
186 187 0.760945 CTCCCCTTCCCAGCGTAGAT 60.761 60.000 0.00 0.00 0.00 1.98
187 188 1.381327 CTCCCCTTCCCAGCGTAGA 60.381 63.158 0.00 0.00 0.00 2.59
188 189 2.435693 CCTCCCCTTCCCAGCGTAG 61.436 68.421 0.00 0.00 0.00 3.51
189 190 2.365105 CCTCCCCTTCCCAGCGTA 60.365 66.667 0.00 0.00 0.00 4.42
190 191 3.864983 TTCCTCCCCTTCCCAGCGT 62.865 63.158 0.00 0.00 0.00 5.07
191 192 3.009115 TTCCTCCCCTTCCCAGCG 61.009 66.667 0.00 0.00 0.00 5.18
192 193 3.002371 CTTCCTCCCCTTCCCAGC 58.998 66.667 0.00 0.00 0.00 4.85
193 194 2.684499 GGCTTCCTCCCCTTCCCAG 61.684 68.421 0.00 0.00 0.00 4.45
194 195 2.614013 GGCTTCCTCCCCTTCCCA 60.614 66.667 0.00 0.00 0.00 4.37
195 196 2.614013 TGGCTTCCTCCCCTTCCC 60.614 66.667 0.00 0.00 0.00 3.97
196 197 3.002371 CTGGCTTCCTCCCCTTCC 58.998 66.667 0.00 0.00 0.00 3.46
197 198 0.983378 TAGCTGGCTTCCTCCCCTTC 60.983 60.000 0.00 0.00 0.00 3.46
198 199 0.985490 CTAGCTGGCTTCCTCCCCTT 60.985 60.000 0.00 0.00 0.00 3.95
199 200 1.383803 CTAGCTGGCTTCCTCCCCT 60.384 63.158 0.00 0.00 0.00 4.79
200 201 1.383248 TCTAGCTGGCTTCCTCCCC 60.383 63.158 0.00 0.00 0.00 4.81
201 202 0.689412 ACTCTAGCTGGCTTCCTCCC 60.689 60.000 0.00 0.00 0.00 4.30
202 203 0.750249 GACTCTAGCTGGCTTCCTCC 59.250 60.000 0.00 0.00 0.00 4.30
203 204 1.681264 GAGACTCTAGCTGGCTTCCTC 59.319 57.143 0.00 0.00 0.00 3.71
204 205 1.006519 TGAGACTCTAGCTGGCTTCCT 59.993 52.381 3.68 0.00 0.00 3.36
205 206 1.136110 GTGAGACTCTAGCTGGCTTCC 59.864 57.143 3.68 0.00 0.00 3.46
206 207 1.136110 GGTGAGACTCTAGCTGGCTTC 59.864 57.143 3.68 0.00 0.00 3.86
207 208 1.190643 GGTGAGACTCTAGCTGGCTT 58.809 55.000 3.68 0.00 0.00 4.35
208 209 0.334676 AGGTGAGACTCTAGCTGGCT 59.665 55.000 3.68 0.00 0.00 4.75
209 210 0.459489 CAGGTGAGACTCTAGCTGGC 59.541 60.000 18.53 0.00 38.42 4.85
210 211 0.459489 GCAGGTGAGACTCTAGCTGG 59.541 60.000 23.42 0.00 41.42 4.85
211 212 1.180907 TGCAGGTGAGACTCTAGCTG 58.819 55.000 20.48 20.48 43.34 4.24
212 213 1.548269 GTTGCAGGTGAGACTCTAGCT 59.452 52.381 3.68 0.00 0.00 3.32
213 214 1.404851 GGTTGCAGGTGAGACTCTAGC 60.405 57.143 3.68 3.41 0.00 3.42
214 215 1.135257 CGGTTGCAGGTGAGACTCTAG 60.135 57.143 3.68 0.00 0.00 2.43
215 216 0.888619 CGGTTGCAGGTGAGACTCTA 59.111 55.000 3.68 0.00 0.00 2.43
216 217 1.668294 CGGTTGCAGGTGAGACTCT 59.332 57.895 3.68 0.00 0.00 3.24
217 218 1.374758 CCGGTTGCAGGTGAGACTC 60.375 63.158 0.00 0.00 0.00 3.36
218 219 1.407656 TTCCGGTTGCAGGTGAGACT 61.408 55.000 0.00 0.00 0.00 3.24
219 220 0.321653 ATTCCGGTTGCAGGTGAGAC 60.322 55.000 0.00 0.00 0.00 3.36
220 221 0.321564 CATTCCGGTTGCAGGTGAGA 60.322 55.000 0.00 0.00 0.00 3.27
221 222 1.308069 CCATTCCGGTTGCAGGTGAG 61.308 60.000 0.00 0.00 0.00 3.51
222 223 1.303236 CCATTCCGGTTGCAGGTGA 60.303 57.895 0.00 0.00 0.00 4.02
223 224 2.993471 GCCATTCCGGTTGCAGGTG 61.993 63.158 0.00 0.00 36.97 4.00
224 225 2.676471 GCCATTCCGGTTGCAGGT 60.676 61.111 0.00 0.00 36.97 4.00
225 226 2.216750 CTTGCCATTCCGGTTGCAGG 62.217 60.000 0.00 3.18 36.97 4.85
226 227 1.213537 CTTGCCATTCCGGTTGCAG 59.786 57.895 0.00 0.00 36.97 4.41
227 228 2.274645 CCTTGCCATTCCGGTTGCA 61.275 57.895 0.00 3.42 36.97 4.08
228 229 2.573340 CCTTGCCATTCCGGTTGC 59.427 61.111 0.00 0.40 36.97 4.17
229 230 3.005540 GCCCTTGCCATTCCGGTTG 62.006 63.158 0.00 0.05 36.97 3.77
230 231 2.679996 GCCCTTGCCATTCCGGTT 60.680 61.111 0.00 0.00 36.97 4.44
232 233 4.794648 TCGCCCTTGCCATTCCGG 62.795 66.667 0.00 0.00 38.11 5.14
233 234 3.508840 GTCGCCCTTGCCATTCCG 61.509 66.667 0.00 0.00 0.00 4.30
234 235 2.361104 TGTCGCCCTTGCCATTCC 60.361 61.111 0.00 0.00 0.00 3.01
235 236 3.056313 GCTGTCGCCCTTGCCATTC 62.056 63.158 0.00 0.00 0.00 2.67
236 237 3.064324 GCTGTCGCCCTTGCCATT 61.064 61.111 0.00 0.00 0.00 3.16
240 241 4.090057 GTTCGCTGTCGCCCTTGC 62.090 66.667 0.00 0.00 35.26 4.01
241 242 3.777925 CGTTCGCTGTCGCCCTTG 61.778 66.667 0.00 0.00 35.26 3.61
264 265 4.742201 TCGAGCTTGCCGACCTGC 62.742 66.667 0.00 0.00 0.00 4.85
283 284 2.105528 TTCGTTATCTCGGCCGCC 59.894 61.111 23.51 0.00 0.00 6.13
284 285 2.574222 CGTTCGTTATCTCGGCCGC 61.574 63.158 23.51 3.78 0.00 6.53
285 286 2.574222 GCGTTCGTTATCTCGGCCG 61.574 63.158 22.12 22.12 0.00 6.13
286 287 2.235699 GGCGTTCGTTATCTCGGCC 61.236 63.158 0.00 0.00 41.64 6.13
287 288 2.574222 CGGCGTTCGTTATCTCGGC 61.574 63.158 0.00 0.00 43.44 5.54
288 289 1.942712 CCGGCGTTCGTTATCTCGG 60.943 63.158 6.01 0.00 37.11 4.63
289 290 2.574222 GCCGGCGTTCGTTATCTCG 61.574 63.158 12.58 0.00 37.11 4.04
290 291 2.574222 CGCCGGCGTTCGTTATCTC 61.574 63.158 39.71 0.00 37.11 2.75
291 292 2.581409 CGCCGGCGTTCGTTATCT 60.581 61.111 39.71 0.00 37.11 1.98
292 293 3.623330 CCGCCGGCGTTCGTTATC 61.623 66.667 43.12 2.88 37.81 1.75
309 310 2.348888 ATCTTTGCTGGCCTGCTGC 61.349 57.895 31.50 17.69 40.16 5.25
310 311 1.511305 CATCTTTGCTGGCCTGCTG 59.489 57.895 31.50 21.61 0.00 4.41
311 312 1.681327 CCATCTTTGCTGGCCTGCT 60.681 57.895 31.50 11.56 0.00 4.24
312 313 1.941999 GACCATCTTTGCTGGCCTGC 61.942 60.000 26.46 26.46 37.27 4.85
313 314 1.651240 CGACCATCTTTGCTGGCCTG 61.651 60.000 3.32 4.26 37.27 4.85
314 315 1.377725 CGACCATCTTTGCTGGCCT 60.378 57.895 3.32 0.00 37.27 5.19
315 316 2.409870 CCGACCATCTTTGCTGGCC 61.410 63.158 0.00 0.00 37.27 5.36
316 317 2.409870 CCCGACCATCTTTGCTGGC 61.410 63.158 0.00 0.00 37.27 4.85
317 318 1.750399 CCCCGACCATCTTTGCTGG 60.750 63.158 0.00 0.00 39.80 4.85
318 319 1.750399 CCCCCGACCATCTTTGCTG 60.750 63.158 0.00 0.00 0.00 4.41
319 320 2.677228 CCCCCGACCATCTTTGCT 59.323 61.111 0.00 0.00 0.00 3.91
320 321 3.140814 GCCCCCGACCATCTTTGC 61.141 66.667 0.00 0.00 0.00 3.68
321 322 1.750399 CTGCCCCCGACCATCTTTG 60.750 63.158 0.00 0.00 0.00 2.77
322 323 2.677228 CTGCCCCCGACCATCTTT 59.323 61.111 0.00 0.00 0.00 2.52
323 324 4.115199 GCTGCCCCCGACCATCTT 62.115 66.667 0.00 0.00 0.00 2.40
340 341 3.039202 GATTTGCTGCCACCGTCGG 62.039 63.158 10.48 10.48 0.00 4.79
341 342 2.480555 GATTTGCTGCCACCGTCG 59.519 61.111 0.00 0.00 0.00 5.12
342 343 2.480555 CGATTTGCTGCCACCGTC 59.519 61.111 0.00 0.00 0.00 4.79
343 344 3.055719 CCGATTTGCTGCCACCGT 61.056 61.111 0.00 0.00 0.00 4.83
344 345 4.481112 GCCGATTTGCTGCCACCG 62.481 66.667 0.00 0.00 0.00 4.94
345 346 3.346631 CTGCCGATTTGCTGCCACC 62.347 63.158 0.00 0.00 0.00 4.61
346 347 2.180017 CTGCCGATTTGCTGCCAC 59.820 61.111 0.00 0.00 0.00 5.01
347 348 2.033911 TCTGCCGATTTGCTGCCA 59.966 55.556 0.00 0.00 0.00 4.92
348 349 1.099879 ATCTCTGCCGATTTGCTGCC 61.100 55.000 0.00 0.00 0.00 4.85
349 350 0.029035 CATCTCTGCCGATTTGCTGC 59.971 55.000 0.00 0.00 0.00 5.25
350 351 0.661552 CCATCTCTGCCGATTTGCTG 59.338 55.000 0.00 0.00 0.00 4.41
351 352 1.099879 GCCATCTCTGCCGATTTGCT 61.100 55.000 0.00 0.00 0.00 3.91
352 353 1.358046 GCCATCTCTGCCGATTTGC 59.642 57.895 0.00 0.00 0.00 3.68
353 354 2.028130 GGCCATCTCTGCCGATTTG 58.972 57.895 0.00 0.00 39.48 2.32
354 355 4.567318 GGCCATCTCTGCCGATTT 57.433 55.556 0.00 0.00 39.48 2.17
388 389 4.803426 CTCCGTCGGTCTGCTGCC 62.803 72.222 11.88 0.00 0.00 4.85
389 390 3.069980 ATCTCCGTCGGTCTGCTGC 62.070 63.158 11.88 0.00 0.00 5.25
390 391 1.226802 CATCTCCGTCGGTCTGCTG 60.227 63.158 11.88 1.60 0.00 4.41
391 392 2.418910 CCATCTCCGTCGGTCTGCT 61.419 63.158 11.88 0.00 0.00 4.24
392 393 2.105128 CCATCTCCGTCGGTCTGC 59.895 66.667 11.88 0.00 0.00 4.26
393 394 0.458543 CAACCATCTCCGTCGGTCTG 60.459 60.000 11.88 7.28 30.91 3.51
394 395 1.605058 CCAACCATCTCCGTCGGTCT 61.605 60.000 11.88 0.00 30.91 3.85
395 396 1.153628 CCAACCATCTCCGTCGGTC 60.154 63.158 11.88 0.00 30.91 4.79
396 397 2.656069 CCCAACCATCTCCGTCGGT 61.656 63.158 11.88 0.00 33.32 4.69
397 398 2.186903 CCCAACCATCTCCGTCGG 59.813 66.667 4.39 4.39 0.00 4.79
398 399 2.186903 CCCCAACCATCTCCGTCG 59.813 66.667 0.00 0.00 0.00 5.12
399 400 2.590092 CCCCCAACCATCTCCGTC 59.410 66.667 0.00 0.00 0.00 4.79
400 401 3.728373 GCCCCCAACCATCTCCGT 61.728 66.667 0.00 0.00 0.00 4.69
401 402 3.704231 CTGCCCCCAACCATCTCCG 62.704 68.421 0.00 0.00 0.00 4.63
402 403 2.276740 CTGCCCCCAACCATCTCC 59.723 66.667 0.00 0.00 0.00 3.71
403 404 2.440980 GCTGCCCCCAACCATCTC 60.441 66.667 0.00 0.00 0.00 2.75
404 405 4.066139 GGCTGCCCCCAACCATCT 62.066 66.667 7.66 0.00 0.00 2.90
405 406 4.380945 TGGCTGCCCCCAACCATC 62.381 66.667 17.53 0.00 32.42 3.51
406 407 4.387343 CTGGCTGCCCCCAACCAT 62.387 66.667 17.53 0.00 36.66 3.55
421 422 4.093952 CTCTGTTTGCCGCCGCTG 62.094 66.667 0.00 0.00 35.36 5.18
422 423 3.612247 ATCTCTGTTTGCCGCCGCT 62.612 57.895 0.00 0.00 35.36 5.52
423 424 3.100862 GATCTCTGTTTGCCGCCGC 62.101 63.158 0.00 0.00 0.00 6.53
424 425 2.802667 CGATCTCTGTTTGCCGCCG 61.803 63.158 0.00 0.00 0.00 6.46
425 426 1.696832 GACGATCTCTGTTTGCCGCC 61.697 60.000 0.00 0.00 0.00 6.13
426 427 1.710339 GACGATCTCTGTTTGCCGC 59.290 57.895 0.00 0.00 0.00 6.53
427 428 1.413767 CCGACGATCTCTGTTTGCCG 61.414 60.000 0.00 0.00 0.00 5.69
428 429 1.084370 CCCGACGATCTCTGTTTGCC 61.084 60.000 0.00 0.00 0.00 4.52
429 430 0.108804 TCCCGACGATCTCTGTTTGC 60.109 55.000 0.00 0.00 0.00 3.68
430 431 1.914634 CTCCCGACGATCTCTGTTTG 58.085 55.000 0.00 0.00 0.00 2.93
431 432 0.173708 GCTCCCGACGATCTCTGTTT 59.826 55.000 0.00 0.00 0.00 2.83
432 433 0.965866 TGCTCCCGACGATCTCTGTT 60.966 55.000 0.00 0.00 0.00 3.16
433 434 1.378646 TGCTCCCGACGATCTCTGT 60.379 57.895 0.00 0.00 0.00 3.41
434 435 1.358402 CTGCTCCCGACGATCTCTG 59.642 63.158 0.00 0.00 0.00 3.35
435 436 2.485795 GCTGCTCCCGACGATCTCT 61.486 63.158 0.00 0.00 0.00 3.10
436 437 2.026879 GCTGCTCCCGACGATCTC 59.973 66.667 0.00 0.00 0.00 2.75
437 438 3.893763 CGCTGCTCCCGACGATCT 61.894 66.667 0.00 0.00 0.00 2.75
442 443 3.567797 GATTGCGCTGCTCCCGAC 61.568 66.667 9.73 0.00 0.00 4.79
443 444 4.081185 TGATTGCGCTGCTCCCGA 62.081 61.111 9.73 0.00 0.00 5.14
444 445 3.570638 CTGATTGCGCTGCTCCCG 61.571 66.667 9.73 0.00 0.00 5.14
445 446 1.525535 ATCTGATTGCGCTGCTCCC 60.526 57.895 9.73 0.00 0.00 4.30
446 447 1.647629 CATCTGATTGCGCTGCTCC 59.352 57.895 9.73 0.00 0.00 4.70
447 448 1.094073 ACCATCTGATTGCGCTGCTC 61.094 55.000 9.73 3.02 0.00 4.26
448 449 0.679002 AACCATCTGATTGCGCTGCT 60.679 50.000 9.73 0.00 0.00 4.24
449 450 0.524816 CAACCATCTGATTGCGCTGC 60.525 55.000 9.73 0.00 0.00 5.25
450 451 0.099968 CCAACCATCTGATTGCGCTG 59.900 55.000 9.73 0.00 0.00 5.18
451 452 1.033746 CCCAACCATCTGATTGCGCT 61.034 55.000 9.73 0.00 0.00 5.92
452 453 1.315257 ACCCAACCATCTGATTGCGC 61.315 55.000 0.00 0.00 0.00 6.09
453 454 1.135315 CAACCCAACCATCTGATTGCG 60.135 52.381 0.00 0.00 0.00 4.85
454 455 2.094545 GTCAACCCAACCATCTGATTGC 60.095 50.000 0.00 0.00 0.00 3.56
455 456 2.493278 GGTCAACCCAACCATCTGATTG 59.507 50.000 0.00 0.00 36.75 2.67
456 457 2.807676 GGTCAACCCAACCATCTGATT 58.192 47.619 0.00 0.00 36.75 2.57
457 458 2.514458 GGTCAACCCAACCATCTGAT 57.486 50.000 0.00 0.00 36.75 2.90
469 470 0.544697 ATGGGTCATACGGGTCAACC 59.455 55.000 0.00 0.00 0.00 3.77
470 471 1.805120 CGATGGGTCATACGGGTCAAC 60.805 57.143 0.00 0.00 0.00 3.18
471 472 0.462375 CGATGGGTCATACGGGTCAA 59.538 55.000 0.00 0.00 0.00 3.18
472 473 1.396607 CCGATGGGTCATACGGGTCA 61.397 60.000 0.00 0.00 41.41 4.02
473 474 1.366366 CCGATGGGTCATACGGGTC 59.634 63.158 0.00 0.00 41.41 4.46
474 475 3.546009 CCGATGGGTCATACGGGT 58.454 61.111 0.00 0.00 41.41 5.28
503 504 2.989055 AAACGGGTCAGTGCAGTCGG 62.989 60.000 5.49 0.00 0.00 4.79
504 505 0.319211 TAAACGGGTCAGTGCAGTCG 60.319 55.000 0.00 0.00 0.00 4.18
505 506 1.732259 CATAAACGGGTCAGTGCAGTC 59.268 52.381 0.00 0.00 0.00 3.51
506 507 1.346395 TCATAAACGGGTCAGTGCAGT 59.654 47.619 0.00 0.00 0.00 4.40
507 508 1.732259 GTCATAAACGGGTCAGTGCAG 59.268 52.381 0.00 0.00 0.00 4.41
508 509 1.346395 AGTCATAAACGGGTCAGTGCA 59.654 47.619 0.00 0.00 0.00 4.57
509 510 2.000447 GAGTCATAAACGGGTCAGTGC 59.000 52.381 0.00 0.00 0.00 4.40
510 511 3.313012 TGAGTCATAAACGGGTCAGTG 57.687 47.619 0.00 0.00 0.00 3.66
511 512 3.306780 CCTTGAGTCATAAACGGGTCAGT 60.307 47.826 0.00 0.00 0.00 3.41
512 513 3.262420 CCTTGAGTCATAAACGGGTCAG 58.738 50.000 0.00 0.00 0.00 3.51
513 514 2.614481 GCCTTGAGTCATAAACGGGTCA 60.614 50.000 0.00 0.00 0.00 4.02
514 515 2.007608 GCCTTGAGTCATAAACGGGTC 58.992 52.381 0.00 0.00 0.00 4.46
515 516 1.339727 GGCCTTGAGTCATAAACGGGT 60.340 52.381 0.00 0.00 0.00 5.28
516 517 1.339631 TGGCCTTGAGTCATAAACGGG 60.340 52.381 3.32 0.00 0.00 5.28
517 518 2.107950 TGGCCTTGAGTCATAAACGG 57.892 50.000 3.32 0.00 0.00 4.44
518 519 2.161609 GGTTGGCCTTGAGTCATAAACG 59.838 50.000 3.32 0.00 0.00 3.60
519 520 2.492088 GGGTTGGCCTTGAGTCATAAAC 59.508 50.000 3.32 0.00 34.45 2.01
520 521 2.109128 TGGGTTGGCCTTGAGTCATAAA 59.891 45.455 3.32 0.00 34.45 1.40
521 522 1.707989 TGGGTTGGCCTTGAGTCATAA 59.292 47.619 3.32 0.00 34.45 1.90
522 523 1.004277 GTGGGTTGGCCTTGAGTCATA 59.996 52.381 3.32 0.00 34.45 2.15
523 524 0.251341 GTGGGTTGGCCTTGAGTCAT 60.251 55.000 3.32 0.00 34.45 3.06
524 525 1.150536 GTGGGTTGGCCTTGAGTCA 59.849 57.895 3.32 0.00 34.45 3.41
525 526 1.603739 GGTGGGTTGGCCTTGAGTC 60.604 63.158 3.32 0.00 34.45 3.36
526 527 2.084930 AGGTGGGTTGGCCTTGAGT 61.085 57.895 3.32 0.00 34.45 3.41
527 528 1.604593 CAGGTGGGTTGGCCTTGAG 60.605 63.158 3.32 0.00 31.73 3.02
528 529 2.520458 CAGGTGGGTTGGCCTTGA 59.480 61.111 3.32 0.00 31.73 3.02
529 530 2.601367 CCAGGTGGGTTGGCCTTG 60.601 66.667 3.32 0.00 31.73 3.61
534 535 1.533753 AATGTGCCAGGTGGGTTGG 60.534 57.895 0.00 0.00 39.65 3.77
535 536 1.667151 CAATGTGCCAGGTGGGTTG 59.333 57.895 0.00 0.00 39.65 3.77
536 537 1.533753 CCAATGTGCCAGGTGGGTT 60.534 57.895 0.00 0.00 39.65 4.11
537 538 2.118076 CCAATGTGCCAGGTGGGT 59.882 61.111 0.00 0.00 39.65 4.51
538 539 3.384532 GCCAATGTGCCAGGTGGG 61.385 66.667 0.00 0.00 40.85 4.61
546 547 0.527565 AAATGTCGAGGCCAATGTGC 59.472 50.000 5.01 0.00 0.00 4.57
547 548 2.598589 CAAAATGTCGAGGCCAATGTG 58.401 47.619 5.01 0.00 0.00 3.21
548 549 1.545582 CCAAAATGTCGAGGCCAATGT 59.454 47.619 5.01 0.00 0.00 2.71
549 550 1.135024 CCCAAAATGTCGAGGCCAATG 60.135 52.381 5.01 0.00 0.00 2.82
550 551 1.185315 CCCAAAATGTCGAGGCCAAT 58.815 50.000 5.01 0.00 0.00 3.16
551 552 1.531739 GCCCAAAATGTCGAGGCCAA 61.532 55.000 5.01 0.00 37.66 4.52
552 553 1.976474 GCCCAAAATGTCGAGGCCA 60.976 57.895 5.01 0.00 37.66 5.36
553 554 2.885113 GCCCAAAATGTCGAGGCC 59.115 61.111 0.00 0.00 37.66 5.19
554 555 2.885113 GGCCCAAAATGTCGAGGC 59.115 61.111 0.00 1.14 43.09 4.70
555 556 2.406616 CCGGCCCAAAATGTCGAGG 61.407 63.158 0.00 0.00 0.00 4.63
556 557 2.406616 CCCGGCCCAAAATGTCGAG 61.407 63.158 0.00 0.00 0.00 4.04
557 558 2.360600 CCCGGCCCAAAATGTCGA 60.361 61.111 0.00 0.00 0.00 4.20
558 559 2.675075 ACCCGGCCCAAAATGTCG 60.675 61.111 0.00 0.00 0.00 4.35
559 560 1.595093 CTGACCCGGCCCAAAATGTC 61.595 60.000 0.00 0.00 0.00 3.06
560 561 1.606313 CTGACCCGGCCCAAAATGT 60.606 57.895 0.00 0.00 0.00 2.71
561 562 1.606313 ACTGACCCGGCCCAAAATG 60.606 57.895 0.00 0.00 0.00 2.32
562 563 1.606313 CACTGACCCGGCCCAAAAT 60.606 57.895 0.00 0.00 0.00 1.82
563 564 2.203422 CACTGACCCGGCCCAAAA 60.203 61.111 0.00 0.00 0.00 2.44
564 565 3.172106 TCACTGACCCGGCCCAAA 61.172 61.111 0.00 0.00 0.00 3.28
565 566 3.948719 GTCACTGACCCGGCCCAA 61.949 66.667 0.00 0.00 0.00 4.12
574 575 2.032681 GCCCACTGGGTCACTGAC 59.967 66.667 16.03 0.00 46.51 3.51
593 594 4.815108 GTGGGAATGGGCCGGGTC 62.815 72.222 2.18 0.00 0.00 4.46
595 596 4.060667 AAGTGGGAATGGGCCGGG 62.061 66.667 2.18 0.00 0.00 5.73
596 597 2.755469 CAAGTGGGAATGGGCCGG 60.755 66.667 0.00 0.00 0.00 6.13
597 598 2.046285 GTCAAGTGGGAATGGGCCG 61.046 63.158 0.00 0.00 0.00 6.13
598 599 0.324645 ATGTCAAGTGGGAATGGGCC 60.325 55.000 0.00 0.00 0.00 5.80
599 600 2.024414 GTATGTCAAGTGGGAATGGGC 58.976 52.381 0.00 0.00 0.00 5.36
600 601 3.364460 TGTATGTCAAGTGGGAATGGG 57.636 47.619 0.00 0.00 0.00 4.00
601 602 3.443681 GGTTGTATGTCAAGTGGGAATGG 59.556 47.826 0.00 0.00 36.66 3.16
602 603 3.126858 CGGTTGTATGTCAAGTGGGAATG 59.873 47.826 0.00 0.00 36.66 2.67
603 604 3.343617 CGGTTGTATGTCAAGTGGGAAT 58.656 45.455 0.00 0.00 36.66 3.01
604 605 2.551287 CCGGTTGTATGTCAAGTGGGAA 60.551 50.000 0.00 0.00 36.66 3.97
605 606 1.002659 CCGGTTGTATGTCAAGTGGGA 59.997 52.381 0.00 0.00 36.66 4.37
606 607 1.271163 ACCGGTTGTATGTCAAGTGGG 60.271 52.381 0.00 0.00 36.44 4.61
607 608 1.804151 CACCGGTTGTATGTCAAGTGG 59.196 52.381 2.97 0.00 36.66 4.00
608 609 1.804151 CCACCGGTTGTATGTCAAGTG 59.196 52.381 2.97 0.00 36.66 3.16
609 610 1.418637 ACCACCGGTTGTATGTCAAGT 59.581 47.619 10.06 0.00 36.66 3.16
610 611 1.804151 CACCACCGGTTGTATGTCAAG 59.196 52.381 11.54 0.00 36.66 3.02
611 612 1.416772 TCACCACCGGTTGTATGTCAA 59.583 47.619 11.54 0.00 31.02 3.18
614 615 1.543871 GGTTCACCACCGGTTGTATGT 60.544 52.381 11.54 0.00 35.12 2.29
640 641 7.201983 GGGGGAAAAAGATACCACTACTACTAG 60.202 44.444 0.00 0.00 0.00 2.57
642 643 5.427806 GGGGGAAAAAGATACCACTACTACT 59.572 44.000 0.00 0.00 0.00 2.57
643 644 5.190330 TGGGGGAAAAAGATACCACTACTAC 59.810 44.000 0.00 0.00 0.00 2.73
651 652 1.475280 GCGTTGGGGGAAAAAGATACC 59.525 52.381 0.00 0.00 0.00 2.73
652 653 1.475280 GGCGTTGGGGGAAAAAGATAC 59.525 52.381 0.00 0.00 0.00 2.24
653 654 1.617533 GGGCGTTGGGGGAAAAAGATA 60.618 52.381 0.00 0.00 0.00 1.98
654 655 0.902984 GGGCGTTGGGGGAAAAAGAT 60.903 55.000 0.00 0.00 0.00 2.40
655 656 1.532078 GGGCGTTGGGGGAAAAAGA 60.532 57.895 0.00 0.00 0.00 2.52
656 657 2.579657 GGGGCGTTGGGGGAAAAAG 61.580 63.158 0.00 0.00 0.00 2.27
657 658 2.524640 GGGGCGTTGGGGGAAAAA 60.525 61.111 0.00 0.00 0.00 1.94
696 697 0.815734 ATGTCAAATGCCAGCTCAGC 59.184 50.000 0.00 0.00 0.00 4.26
733 734 1.132689 ACAGGGAGAAGAAGACTGGGT 60.133 52.381 0.00 0.00 33.63 4.51
828 834 1.323235 CGAAGAACATGCACGCGATTA 59.677 47.619 15.93 0.00 0.00 1.75
1043 1049 4.920112 CAACGGTGGTGGTCGGCA 62.920 66.667 0.00 0.00 0.00 5.69
1129 1135 4.753662 CCTCGACTCCCCGGTGGA 62.754 72.222 10.78 10.78 42.41 4.02
1237 1243 3.391382 GACGACCTCCACCCCCTG 61.391 72.222 0.00 0.00 0.00 4.45
1482 1488 0.389817 CGGTGCTGACGAAGAATCCA 60.390 55.000 0.00 0.00 0.00 3.41
1627 1633 8.044060 TGTCCACTTCAAAGAATCATATCAAC 57.956 34.615 0.00 0.00 0.00 3.18
1741 1751 1.066002 CAAGGTTCAGTGCAACACCTG 59.934 52.381 7.87 2.36 39.71 4.00
1818 1828 3.963383 ATGAAGTCGTGAAAACACCAC 57.037 42.857 0.00 0.00 0.00 4.16
1865 1875 2.082437 CTTATTGCGGAGACAGCGCG 62.082 60.000 0.00 0.00 37.44 6.86
1887 1897 0.255890 GCCTTATTCCTGACCTGCCA 59.744 55.000 0.00 0.00 0.00 4.92
1897 1907 0.251341 ATCCATGCCCGCCTTATTCC 60.251 55.000 0.00 0.00 0.00 3.01
2116 2134 6.057321 TGTGATACCCTTAAGGACGATTTT 57.943 37.500 23.74 0.19 39.89 1.82
2300 2318 7.011857 GGCCATGCTATCTCTGTTATTAATAGC 59.988 40.741 0.00 2.57 43.18 2.97
2378 2396 1.102154 CACACAAACCAGGTTGAGCA 58.898 50.000 5.30 0.00 32.59 4.26
2432 2451 4.792804 GCTCCTCACAGCCAGCCC 62.793 72.222 0.00 0.00 32.76 5.19
2635 2713 4.487948 AGACACGCATTGGATCAAAAATG 58.512 39.130 9.49 9.49 36.95 2.32
2685 2763 6.597614 CAAAAGACAAGAGAGTGAATGCTAC 58.402 40.000 0.00 0.00 0.00 3.58
3026 3111 1.213296 AAGGTGTAGCCGATGGGAAT 58.787 50.000 0.00 0.00 43.70 3.01
3205 3290 1.077930 GCTGGCTCAGAATCAGGCA 60.078 57.895 6.40 0.00 43.74 4.75
3234 3319 2.230660 GCTGCTTACAGGTTGAAAGGT 58.769 47.619 0.00 0.00 44.63 3.50
3245 3330 1.374631 CGCTGACTGGCTGCTTACA 60.375 57.895 10.75 0.00 39.10 2.41
3413 3498 4.386652 GCAAATGGACAACACACATCATTC 59.613 41.667 0.00 0.00 0.00 2.67
3436 3521 1.102978 CCAGACGGGGGCTTATTTTG 58.897 55.000 0.00 0.00 0.00 2.44
3450 3535 4.200092 AGAAAAACTCACAGGTTCCAGAC 58.800 43.478 0.00 0.00 0.00 3.51
3460 3545 5.125257 TCACAGCAATCAAGAAAAACTCACA 59.875 36.000 0.00 0.00 0.00 3.58
3526 3611 7.276438 GCAGATGATGTTATTCGATGTAGCATA 59.724 37.037 7.38 0.00 0.00 3.14
3578 3663 7.644157 CCTTAAGTTCAGAAAACAAAGTAGCAC 59.356 37.037 0.97 0.00 0.00 4.40
3601 3686 0.255033 GGATAACCGAACAGGCCCTT 59.745 55.000 0.00 0.00 46.52 3.95
3602 3687 0.912487 TGGATAACCGAACAGGCCCT 60.912 55.000 0.00 0.00 46.52 5.19
3603 3688 0.746923 GTGGATAACCGAACAGGCCC 60.747 60.000 0.00 0.00 46.52 5.80
3604 3689 0.252197 AGTGGATAACCGAACAGGCC 59.748 55.000 0.00 0.00 46.52 5.19
3605 3690 1.369625 CAGTGGATAACCGAACAGGC 58.630 55.000 0.00 0.00 46.52 4.85
3607 3692 1.066143 AGCCAGTGGATAACCGAACAG 60.066 52.381 15.20 0.00 39.42 3.16
3608 3693 0.981183 AGCCAGTGGATAACCGAACA 59.019 50.000 15.20 0.00 39.42 3.18
3609 3694 1.653151 GAGCCAGTGGATAACCGAAC 58.347 55.000 15.20 0.00 39.42 3.95
3610 3695 0.539986 GGAGCCAGTGGATAACCGAA 59.460 55.000 15.20 0.00 39.42 4.30
3611 3696 1.672854 CGGAGCCAGTGGATAACCGA 61.673 60.000 19.90 0.00 41.09 4.69
3612 3697 1.227263 CGGAGCCAGTGGATAACCG 60.227 63.158 15.20 13.65 39.42 4.44
3613 3698 0.462047 CACGGAGCCAGTGGATAACC 60.462 60.000 15.20 3.88 36.06 2.85
3614 3699 0.535335 TCACGGAGCCAGTGGATAAC 59.465 55.000 15.20 1.95 39.86 1.89
3615 3700 1.271856 TTCACGGAGCCAGTGGATAA 58.728 50.000 15.20 0.00 39.86 1.75
3616 3701 1.271856 TTTCACGGAGCCAGTGGATA 58.728 50.000 15.20 0.00 39.86 2.59
3617 3702 0.620556 ATTTCACGGAGCCAGTGGAT 59.379 50.000 15.20 6.44 39.86 3.41
3618 3703 0.400213 AATTTCACGGAGCCAGTGGA 59.600 50.000 15.20 0.00 39.86 4.02
3619 3704 1.737793 GTAATTTCACGGAGCCAGTGG 59.262 52.381 4.20 4.20 39.86 4.00
3620 3705 2.416547 CTGTAATTTCACGGAGCCAGTG 59.583 50.000 0.00 0.00 40.71 3.66
3621 3706 2.615493 CCTGTAATTTCACGGAGCCAGT 60.615 50.000 0.00 0.00 0.00 4.00
3622 3707 2.009774 CCTGTAATTTCACGGAGCCAG 58.990 52.381 0.00 0.00 0.00 4.85
3623 3708 1.339631 CCCTGTAATTTCACGGAGCCA 60.340 52.381 0.00 0.00 0.00 4.75
3624 3709 1.065709 TCCCTGTAATTTCACGGAGCC 60.066 52.381 0.00 0.00 0.00 4.70
3625 3710 2.396590 TCCCTGTAATTTCACGGAGC 57.603 50.000 0.00 0.00 0.00 4.70
3626 3711 4.122776 CAGATCCCTGTAATTTCACGGAG 58.877 47.826 8.36 0.00 35.70 4.63
3627 3712 3.681594 GCAGATCCCTGTAATTTCACGGA 60.682 47.826 5.51 5.51 42.35 4.69
3628 3713 2.614057 GCAGATCCCTGTAATTTCACGG 59.386 50.000 0.00 0.00 42.35 4.94
3629 3714 2.285220 CGCAGATCCCTGTAATTTCACG 59.715 50.000 0.00 0.00 42.35 4.35
3630 3715 2.614057 CCGCAGATCCCTGTAATTTCAC 59.386 50.000 0.00 0.00 42.35 3.18
3631 3716 2.503765 TCCGCAGATCCCTGTAATTTCA 59.496 45.455 0.00 0.00 42.35 2.69
3632 3717 3.134458 CTCCGCAGATCCCTGTAATTTC 58.866 50.000 0.00 0.00 42.35 2.17
3633 3718 2.746472 GCTCCGCAGATCCCTGTAATTT 60.746 50.000 0.00 0.00 42.35 1.82
3634 3719 1.202698 GCTCCGCAGATCCCTGTAATT 60.203 52.381 0.00 0.00 42.35 1.40
3635 3720 0.394565 GCTCCGCAGATCCCTGTAAT 59.605 55.000 0.00 0.00 42.35 1.89
3636 3721 0.975556 TGCTCCGCAGATCCCTGTAA 60.976 55.000 0.00 0.00 42.35 2.41
3637 3722 1.381191 TGCTCCGCAGATCCCTGTA 60.381 57.895 0.00 0.00 42.35 2.74
3638 3723 2.685017 TGCTCCGCAGATCCCTGT 60.685 61.111 0.00 0.00 42.35 4.00
3639 3724 2.202987 GTGCTCCGCAGATCCCTG 60.203 66.667 0.00 0.00 40.08 4.45
3640 3725 2.589610 TAGGTGCTCCGCAGATCCCT 62.590 60.000 0.00 2.07 40.08 4.20
3641 3726 1.476007 ATAGGTGCTCCGCAGATCCC 61.476 60.000 0.00 0.00 40.08 3.85
3642 3727 0.394565 AATAGGTGCTCCGCAGATCC 59.605 55.000 0.00 0.00 40.08 3.36
3643 3728 2.246719 AAATAGGTGCTCCGCAGATC 57.753 50.000 0.00 0.00 40.08 2.75
3644 3729 2.292267 CAAAATAGGTGCTCCGCAGAT 58.708 47.619 0.00 0.00 40.08 2.90
3645 3730 1.737838 CAAAATAGGTGCTCCGCAGA 58.262 50.000 0.00 0.00 40.08 4.26
3646 3731 0.099436 GCAAAATAGGTGCTCCGCAG 59.901 55.000 0.00 0.00 40.08 5.18
3647 3732 0.607762 TGCAAAATAGGTGCTCCGCA 60.608 50.000 0.00 0.00 42.69 5.69
3648 3733 0.099436 CTGCAAAATAGGTGCTCCGC 59.901 55.000 0.00 0.00 42.69 5.54
3649 3734 0.099436 GCTGCAAAATAGGTGCTCCG 59.901 55.000 0.00 0.00 42.69 4.63
3650 3735 1.403323 GAGCTGCAAAATAGGTGCTCC 59.597 52.381 8.67 0.00 42.69 4.70
3651 3736 1.403323 GGAGCTGCAAAATAGGTGCTC 59.597 52.381 10.85 10.85 44.08 4.26
3652 3737 1.467920 GGAGCTGCAAAATAGGTGCT 58.532 50.000 0.00 0.00 42.69 4.40
3653 3738 0.099436 CGGAGCTGCAAAATAGGTGC 59.901 55.000 5.91 0.00 42.55 5.01
3701 3786 4.544689 CTCCAGACTCCGCTCGCG 62.545 72.222 0.00 0.00 39.44 5.87
3702 3787 3.444805 ACTCCAGACTCCGCTCGC 61.445 66.667 0.00 0.00 0.00 5.03
3703 3788 2.487428 CACTCCAGACTCCGCTCG 59.513 66.667 0.00 0.00 0.00 5.03
3704 3789 1.662438 CTCCACTCCAGACTCCGCTC 61.662 65.000 0.00 0.00 0.00 5.03
3705 3790 1.680651 CTCCACTCCAGACTCCGCT 60.681 63.158 0.00 0.00 0.00 5.52
3706 3791 2.716017 CCTCCACTCCAGACTCCGC 61.716 68.421 0.00 0.00 0.00 5.54
3707 3792 2.055042 CCCTCCACTCCAGACTCCG 61.055 68.421 0.00 0.00 0.00 4.63
3708 3793 0.973496 GTCCCTCCACTCCAGACTCC 60.973 65.000 0.00 0.00 0.00 3.85
3709 3794 0.040499 AGTCCCTCCACTCCAGACTC 59.960 60.000 0.00 0.00 32.42 3.36
3710 3795 0.040499 GAGTCCCTCCACTCCAGACT 59.960 60.000 0.00 0.00 40.40 3.24
3711 3796 2.585876 GAGTCCCTCCACTCCAGAC 58.414 63.158 0.00 0.00 37.43 3.51
3720 3805 1.605971 GGAGTGTTCGGAGTCCCTCC 61.606 65.000 13.71 13.71 46.44 4.30
3721 3806 1.891616 GGAGTGTTCGGAGTCCCTC 59.108 63.158 2.80 3.69 30.03 4.30
3722 3807 4.115270 GGAGTGTTCGGAGTCCCT 57.885 61.111 2.80 0.00 30.03 4.20
3723 3808 2.979649 GGGAGTGTTCGGAGTCCC 59.020 66.667 2.80 7.04 46.36 4.46
3724 3809 1.477295 CTTAGGGAGTGTTCGGAGTCC 59.523 57.143 0.00 0.00 34.99 3.85
3725 3810 2.169330 ACTTAGGGAGTGTTCGGAGTC 58.831 52.381 0.00 0.00 37.17 3.36
3726 3811 2.305858 ACTTAGGGAGTGTTCGGAGT 57.694 50.000 0.00 0.00 37.17 3.85
3727 3812 3.586892 GAAACTTAGGGAGTGTTCGGAG 58.413 50.000 0.00 0.00 39.00 4.63
3728 3813 2.301009 GGAAACTTAGGGAGTGTTCGGA 59.699 50.000 0.00 0.00 39.00 4.55
3729 3814 2.696506 GGAAACTTAGGGAGTGTTCGG 58.303 52.381 0.00 0.00 39.00 4.30
3730 3815 2.334838 CGGAAACTTAGGGAGTGTTCG 58.665 52.381 0.00 0.00 38.22 3.95
3731 3816 3.064931 CACGGAAACTTAGGGAGTGTTC 58.935 50.000 0.00 0.00 39.00 3.18
3732 3817 2.436911 ACACGGAAACTTAGGGAGTGTT 59.563 45.455 0.00 0.00 39.00 3.32
3733 3818 2.044758 ACACGGAAACTTAGGGAGTGT 58.955 47.619 0.00 0.00 39.00 3.55
3734 3819 2.806244 CAACACGGAAACTTAGGGAGTG 59.194 50.000 0.00 0.00 39.00 3.51
3735 3820 2.809299 GCAACACGGAAACTTAGGGAGT 60.809 50.000 0.00 0.00 41.47 3.85
3736 3821 1.804748 GCAACACGGAAACTTAGGGAG 59.195 52.381 0.00 0.00 0.00 4.30
3737 3822 1.418637 AGCAACACGGAAACTTAGGGA 59.581 47.619 0.00 0.00 0.00 4.20
3738 3823 1.892209 AGCAACACGGAAACTTAGGG 58.108 50.000 0.00 0.00 0.00 3.53
3739 3824 3.066203 ACAAAGCAACACGGAAACTTAGG 59.934 43.478 0.00 0.00 0.00 2.69
3740 3825 4.287238 ACAAAGCAACACGGAAACTTAG 57.713 40.909 0.00 0.00 0.00 2.18
3741 3826 4.705337 AACAAAGCAACACGGAAACTTA 57.295 36.364 0.00 0.00 0.00 2.24
3936 4184 6.187682 TGTAGACCATGATGTGTTCTAGAGA 58.812 40.000 0.00 0.00 33.14 3.10
3938 4186 6.850752 TTGTAGACCATGATGTGTTCTAGA 57.149 37.500 0.00 0.00 33.14 2.43
4006 4306 6.816140 TGTCTGAGACATATTGCGTTTAATGA 59.184 34.615 11.93 0.00 37.67 2.57
4021 4321 0.317854 CGTCAGCGTTGTCTGAGACA 60.318 55.000 11.93 11.93 43.10 3.41
4040 4340 1.706287 GAATTTGGAGGAGCGGCGTC 61.706 60.000 9.37 4.77 0.00 5.19
4043 4343 1.671328 GTAAGAATTTGGAGGAGCGGC 59.329 52.381 0.00 0.00 0.00 6.53
4117 4418 1.756375 GCGAGCAATGTAGTGAGGCG 61.756 60.000 0.00 0.00 0.00 5.52
4157 4458 3.425193 GCCAAAACTTGCAAACGATGTAG 59.575 43.478 0.00 0.00 0.00 2.74
4162 4463 0.179097 GGGCCAAAACTTGCAAACGA 60.179 50.000 4.39 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.