Multiple sequence alignment - TraesCS1D01G133600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G133600 chr1D 100.000 6498 0 0 1 6498 163129264 163135761 0.000000e+00 12000.0
1 TraesCS1D01G133600 chr1D 91.803 305 21 4 529 830 95951010 95950707 7.790000e-114 422.0
2 TraesCS1D01G133600 chr1D 91.205 307 25 2 530 834 493486421 493486115 3.620000e-112 416.0
3 TraesCS1D01G133600 chr1D 93.458 107 6 1 1699 1805 463381904 463382009 2.430000e-34 158.0
4 TraesCS1D01G133600 chr1D 92.523 107 7 1 1700 1806 452344571 452344676 1.130000e-32 152.0
5 TraesCS1D01G133600 chr1D 87.356 87 11 0 444 530 163128739 163128653 4.150000e-17 100.0
6 TraesCS1D01G133600 chr1D 97.222 36 1 0 3657 3692 10615344 10615309 1.960000e-05 62.1
7 TraesCS1D01G133600 chr1B 96.655 2810 75 8 2775 5571 217722649 217725452 0.000000e+00 4650.0
8 TraesCS1D01G133600 chr1B 95.580 1267 29 11 860 2123 217694084 217695326 0.000000e+00 2004.0
9 TraesCS1D01G133600 chr1B 93.874 555 11 5 2220 2773 217722000 217722532 0.000000e+00 815.0
10 TraesCS1D01G133600 chr1B 97.170 106 3 0 2119 2224 217720650 217720755 5.180000e-41 180.0
11 TraesCS1D01G133600 chr1B 79.528 254 45 6 3654 3904 376614966 376615215 2.410000e-39 174.0
12 TraesCS1D01G133600 chr1B 97.674 86 2 0 5561 5646 217725415 217725500 1.460000e-31 148.0
13 TraesCS1D01G133600 chr1B 73.946 261 65 3 3654 3912 266927513 266927254 1.150000e-17 102.0
14 TraesCS1D01G133600 chr1B 82.500 80 13 1 3664 3742 327484061 327484140 1.170000e-07 69.4
15 TraesCS1D01G133600 chrUn 97.471 2491 53 5 859 3344 107360088 107357603 0.000000e+00 4242.0
16 TraesCS1D01G133600 chrUn 97.496 1358 29 4 3562 4916 107355033 107356388 0.000000e+00 2314.0
17 TraesCS1D01G133600 chrUn 96.911 518 10 4 4913 5426 107355048 107354533 0.000000e+00 863.0
18 TraesCS1D01G133600 chrUn 97.925 241 4 1 3337 3577 107356624 107356385 3.620000e-112 416.0
19 TraesCS1D01G133600 chrUn 98.684 152 1 1 5421 5571 107342853 107342702 1.070000e-67 268.0
20 TraesCS1D01G133600 chrUn 98.837 86 1 0 5561 5646 107342739 107342654 3.140000e-33 154.0
21 TraesCS1D01G133600 chr2A 89.253 884 61 8 5646 6498 19352531 19351651 0.000000e+00 1075.0
22 TraesCS1D01G133600 chr2A 87.413 143 15 3 1700 1841 746354889 746355029 1.880000e-35 161.0
23 TraesCS1D01G133600 chr2A 77.165 254 54 4 3659 3910 566592038 566591787 1.890000e-30 145.0
24 TraesCS1D01G133600 chr2B 88.940 877 63 17 5646 6492 461572557 461573429 0.000000e+00 1051.0
25 TraesCS1D01G133600 chr2B 86.437 870 100 12 5640 6498 295532978 295533840 0.000000e+00 937.0
26 TraesCS1D01G133600 chr2B 87.348 577 65 7 5924 6498 735927861 735928431 0.000000e+00 654.0
27 TraesCS1D01G133600 chr2B 75.600 250 53 7 3659 3904 755625981 755625736 4.120000e-22 117.0
28 TraesCS1D01G133600 chr4A 88.763 881 68 13 5646 6498 719416109 719415232 0.000000e+00 1050.0
29 TraesCS1D01G133600 chr4A 93.578 109 6 1 1697 1805 150653310 150653417 1.880000e-35 161.0
30 TraesCS1D01G133600 chr5A 88.699 876 76 13 5643 6498 502534276 502535148 0.000000e+00 1048.0
31 TraesCS1D01G133600 chr5A 88.514 888 66 18 5643 6498 219247587 219246704 0.000000e+00 1042.0
32 TraesCS1D01G133600 chr5A 87.882 883 68 22 5646 6498 2861093 2860220 0.000000e+00 1002.0
33 TraesCS1D01G133600 chr5A 94.340 106 5 1 1697 1801 505768813 505768708 1.880000e-35 161.0
34 TraesCS1D01G133600 chr5A 90.244 41 3 1 2176 2215 579241960 579242000 1.200000e-02 52.8
35 TraesCS1D01G133600 chr2D 87.819 862 89 13 5646 6498 21472448 21471594 0.000000e+00 996.0
36 TraesCS1D01G133600 chr2D 91.824 318 22 4 527 841 561320884 561321200 2.150000e-119 440.0
37 TraesCS1D01G133600 chr2D 92.434 304 21 2 529 830 94946851 94946548 3.600000e-117 433.0
38 TraesCS1D01G133600 chr2D 91.640 311 24 2 525 833 512926226 512925916 4.660000e-116 429.0
39 TraesCS1D01G133600 chr2D 92.105 304 22 2 529 830 448611456 448611153 1.670000e-115 427.0
40 TraesCS1D01G133600 chr2D 91.150 113 8 2 1693 1805 157450250 157450360 1.130000e-32 152.0
41 TraesCS1D01G133600 chr2D 86.429 140 16 3 1700 1837 640202488 640202626 4.060000e-32 150.0
42 TraesCS1D01G133600 chr2D 90.991 111 8 2 1696 1805 288620642 288620533 1.460000e-31 148.0
43 TraesCS1D01G133600 chr2D 75.984 254 59 2 3660 3912 638340872 638340620 5.290000e-26 130.0
44 TraesCS1D01G133600 chr5D 87.472 886 74 20 5645 6498 317228688 317227808 0.000000e+00 987.0
45 TraesCS1D01G133600 chr5D 92.079 303 23 1 529 830 447952720 447952418 6.020000e-115 425.0
46 TraesCS1D01G133600 chr5D 91.776 304 23 2 529 830 183935637 183935940 7.790000e-114 422.0
47 TraesCS1D01G133600 chr5D 91.531 307 25 1 529 834 268836383 268836077 7.790000e-114 422.0
48 TraesCS1D01G133600 chr5D 91.776 304 23 2 529 830 303021744 303021441 7.790000e-114 422.0
49 TraesCS1D01G133600 chr5D 92.523 107 7 1 1699 1805 406167736 406167631 1.130000e-32 152.0
50 TraesCS1D01G133600 chr5D 74.699 249 55 7 3660 3904 28664895 28665139 3.200000e-18 104.0
51 TraesCS1D01G133600 chr5D 73.384 263 53 13 3654 3912 286167686 286167935 1.500000e-11 82.4
52 TraesCS1D01G133600 chr7D 87.203 883 79 13 5646 6498 50086585 50085707 0.000000e+00 974.0
53 TraesCS1D01G133600 chr7D 86.534 854 100 13 5644 6490 19321294 19322139 0.000000e+00 926.0
54 TraesCS1D01G133600 chr7D 91.290 310 25 2 523 830 209720269 209720578 7.790000e-114 422.0
55 TraesCS1D01G133600 chr7D 91.290 310 25 2 529 836 478554991 478554682 7.790000e-114 422.0
56 TraesCS1D01G133600 chr5B 88.696 575 54 11 5927 6498 487914956 487914390 0.000000e+00 691.0
57 TraesCS1D01G133600 chr5B 80.816 245 41 4 3663 3904 18065189 18065430 3.090000e-43 187.0
58 TraesCS1D01G133600 chr5B 93.458 107 6 1 1700 1806 539314443 539314338 2.430000e-34 158.0
59 TraesCS1D01G133600 chr5B 75.984 254 57 4 3653 3904 367465980 367466231 1.900000e-25 128.0
60 TraesCS1D01G133600 chr7A 88.153 574 60 7 5927 6498 646933308 646932741 0.000000e+00 676.0
61 TraesCS1D01G133600 chr7A 77.404 208 46 1 3653 3859 55891370 55891577 8.850000e-24 122.0
62 TraesCS1D01G133600 chr6B 89.811 530 45 4 1 530 388408136 388408656 0.000000e+00 671.0
63 TraesCS1D01G133600 chr6B 92.035 113 6 3 1696 1806 147089609 147089498 8.720000e-34 156.0
64 TraesCS1D01G133600 chr6B 84.564 149 14 8 1700 1841 173969392 173969246 8.790000e-29 139.0
65 TraesCS1D01G133600 chr6B 85.882 85 12 0 446 530 388407589 388407505 2.500000e-14 91.6
66 TraesCS1D01G133600 chr3D 86.811 599 46 19 5928 6498 573830383 573830976 7.110000e-179 638.0
67 TraesCS1D01G133600 chr3D 92.763 304 20 2 529 830 386221390 386221087 7.740000e-119 438.0
68 TraesCS1D01G133600 chr3D 92.233 309 22 2 529 835 467323581 467323889 2.780000e-118 436.0
69 TraesCS1D01G133600 chr3D 92.105 304 22 2 529 830 472360085 472360388 1.670000e-115 427.0
70 TraesCS1D01G133600 chr3D 91.776 304 23 2 529 830 462332718 462333021 7.790000e-114 422.0
71 TraesCS1D01G133600 chr3D 93.458 107 5 2 1700 1805 401307317 401307212 2.430000e-34 158.0
72 TraesCS1D01G133600 chr3D 93.396 106 6 1 1700 1805 149764623 149764727 8.720000e-34 156.0
73 TraesCS1D01G133600 chr3D 93.333 105 7 0 1700 1804 375721194 375721090 8.720000e-34 156.0
74 TraesCS1D01G133600 chr3D 93.396 106 6 1 1700 1805 537154863 537154759 8.720000e-34 156.0
75 TraesCS1D01G133600 chr3D 76.923 247 53 3 3660 3904 595682375 595682619 3.160000e-28 137.0
76 TraesCS1D01G133600 chr3D 75.294 255 59 4 3660 3912 599447086 599446834 1.140000e-22 119.0
77 TraesCS1D01G133600 chr6D 91.935 310 23 2 523 830 408547623 408547932 3.600000e-117 433.0
78 TraesCS1D01G133600 chr6D 90.968 310 26 2 527 834 13098548 13098857 3.620000e-112 416.0
79 TraesCS1D01G133600 chr6D 91.118 304 25 2 529 830 128324452 128324149 1.690000e-110 411.0
80 TraesCS1D01G133600 chr6D 90.789 304 26 2 529 830 160040502 160040199 7.850000e-109 405.0
81 TraesCS1D01G133600 chr6D 90.789 304 26 2 529 830 268433408 268433105 7.850000e-109 405.0
82 TraesCS1D01G133600 chr6D 90.789 304 26 2 529 830 276003358 276003661 7.850000e-109 405.0
83 TraesCS1D01G133600 chr6D 90.970 299 26 1 531 828 173397984 173397686 1.010000e-107 401.0
84 TraesCS1D01G133600 chr6D 90.461 304 27 2 529 830 216368953 216369256 3.650000e-107 399.0
85 TraesCS1D01G133600 chr6D 90.492 305 26 3 529 830 252716719 252716415 3.650000e-107 399.0
86 TraesCS1D01G133600 chr6D 90.461 304 27 2 529 830 271805646 271805949 3.650000e-107 399.0
87 TraesCS1D01G133600 chr6D 93.396 106 6 1 1700 1805 351233596 351233492 8.720000e-34 156.0
88 TraesCS1D01G133600 chr6D 92.453 106 7 1 1700 1805 21051971 21052075 4.060000e-32 150.0
89 TraesCS1D01G133600 chr6D 92.453 106 7 1 1700 1805 178849199 178849303 4.060000e-32 150.0
90 TraesCS1D01G133600 chr6D 90.991 111 8 2 1692 1801 90112407 90112298 1.460000e-31 148.0
91 TraesCS1D01G133600 chr6D 91.667 108 8 1 1698 1805 141446538 141446432 1.460000e-31 148.0
92 TraesCS1D01G133600 chr6D 91.667 108 7 2 1699 1805 143705328 143705222 1.460000e-31 148.0
93 TraesCS1D01G133600 chr6D 90.351 114 9 2 1693 1805 293177411 293177299 1.460000e-31 148.0
94 TraesCS1D01G133600 chr6D 91.589 107 7 2 1700 1805 431000016 431000121 5.250000e-31 147.0
95 TraesCS1D01G133600 chr6D 91.589 107 7 2 1699 1805 431160667 431160771 5.250000e-31 147.0
96 TraesCS1D01G133600 chr6D 90.179 112 10 1 1694 1805 211672598 211672708 1.890000e-30 145.0
97 TraesCS1D01G133600 chr1A 91.693 313 24 2 530 840 68157345 68157033 3.600000e-117 433.0
98 TraesCS1D01G133600 chr1A 78.808 151 18 10 2123 2261 527172888 527172740 8.970000e-14 89.8
99 TraesCS1D01G133600 chr4D 91.640 311 22 4 529 836 484999818 484999509 1.670000e-115 427.0
100 TraesCS1D01G133600 chr4D 91.776 304 23 2 529 830 170340822 170341125 7.790000e-114 422.0
101 TraesCS1D01G133600 chr4D 91.290 310 25 2 529 836 223922904 223922595 7.790000e-114 422.0
102 TraesCS1D01G133600 chr4D 91.447 304 24 2 529 830 371002509 371002812 3.620000e-112 416.0
103 TraesCS1D01G133600 chr4D 90.968 310 26 2 523 830 421824559 421824868 3.620000e-112 416.0
104 TraesCS1D01G133600 chr4D 91.475 305 23 3 528 830 504893397 504893700 3.620000e-112 416.0
105 TraesCS1D01G133600 chr4D 94.175 103 6 0 1699 1801 163791336 163791438 2.430000e-34 158.0
106 TraesCS1D01G133600 chr4D 93.396 106 6 1 1700 1805 64390632 64390528 8.720000e-34 156.0
107 TraesCS1D01G133600 chr4D 91.892 111 7 2 1696 1805 243613440 243613331 3.140000e-33 154.0
108 TraesCS1D01G133600 chr4D 100.000 29 0 0 3655 3683 6207650 6207678 3.000000e-03 54.7
109 TraesCS1D01G133600 chr3A 95.283 106 4 1 1700 1805 726768968 726769072 4.030000e-37 167.0
110 TraesCS1D01G133600 chr6A 76.695 236 52 2 3660 3893 577006711 577006945 1.900000e-25 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G133600 chr1D 163129264 163135761 6497 False 12000.000000 12000 100.000000 1 6498 1 chr1D.!!$F1 6497
1 TraesCS1D01G133600 chr1B 217694084 217695326 1242 False 2004.000000 2004 95.580000 860 2123 1 chr1B.!!$F1 1263
2 TraesCS1D01G133600 chr1B 217720650 217725500 4850 False 1448.250000 4650 96.343250 2119 5646 4 chr1B.!!$F4 3527
3 TraesCS1D01G133600 chrUn 107355033 107356388 1355 False 2314.000000 2314 97.496000 3562 4916 1 chrUn.!!$F1 1354
4 TraesCS1D01G133600 chrUn 107354533 107360088 5555 True 1840.333333 4242 97.435667 859 5426 3 chrUn.!!$R2 4567
5 TraesCS1D01G133600 chr2A 19351651 19352531 880 True 1075.000000 1075 89.253000 5646 6498 1 chr2A.!!$R1 852
6 TraesCS1D01G133600 chr2B 461572557 461573429 872 False 1051.000000 1051 88.940000 5646 6492 1 chr2B.!!$F2 846
7 TraesCS1D01G133600 chr2B 295532978 295533840 862 False 937.000000 937 86.437000 5640 6498 1 chr2B.!!$F1 858
8 TraesCS1D01G133600 chr2B 735927861 735928431 570 False 654.000000 654 87.348000 5924 6498 1 chr2B.!!$F3 574
9 TraesCS1D01G133600 chr4A 719415232 719416109 877 True 1050.000000 1050 88.763000 5646 6498 1 chr4A.!!$R1 852
10 TraesCS1D01G133600 chr5A 502534276 502535148 872 False 1048.000000 1048 88.699000 5643 6498 1 chr5A.!!$F1 855
11 TraesCS1D01G133600 chr5A 219246704 219247587 883 True 1042.000000 1042 88.514000 5643 6498 1 chr5A.!!$R2 855
12 TraesCS1D01G133600 chr5A 2860220 2861093 873 True 1002.000000 1002 87.882000 5646 6498 1 chr5A.!!$R1 852
13 TraesCS1D01G133600 chr2D 21471594 21472448 854 True 996.000000 996 87.819000 5646 6498 1 chr2D.!!$R1 852
14 TraesCS1D01G133600 chr5D 317227808 317228688 880 True 987.000000 987 87.472000 5645 6498 1 chr5D.!!$R3 853
15 TraesCS1D01G133600 chr7D 50085707 50086585 878 True 974.000000 974 87.203000 5646 6498 1 chr7D.!!$R1 852
16 TraesCS1D01G133600 chr7D 19321294 19322139 845 False 926.000000 926 86.534000 5644 6490 1 chr7D.!!$F1 846
17 TraesCS1D01G133600 chr5B 487914390 487914956 566 True 691.000000 691 88.696000 5927 6498 1 chr5B.!!$R1 571
18 TraesCS1D01G133600 chr7A 646932741 646933308 567 True 676.000000 676 88.153000 5927 6498 1 chr7A.!!$R1 571
19 TraesCS1D01G133600 chr6B 388408136 388408656 520 False 671.000000 671 89.811000 1 530 1 chr6B.!!$F1 529
20 TraesCS1D01G133600 chr3D 573830383 573830976 593 False 638.000000 638 86.811000 5928 6498 1 chr3D.!!$F5 570

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
337 338 0.179282 CGTTTCTGCGCGTGTAAGAC 60.179 55.000 8.43 0.0 0.00 3.01 F
394 395 0.245539 TCTCCCGTTCGTGGTCAATC 59.754 55.000 0.00 0.0 0.00 2.67 F
405 406 0.251297 TGGTCAATCTGTGGGGCAAG 60.251 55.000 0.00 0.0 0.00 4.01 F
592 593 0.252197 AACCGTGGGATTAGAGTGGC 59.748 55.000 0.00 0.0 0.00 5.01 F
1194 1198 0.391597 TCCACCTGGTTTCGTGACTC 59.608 55.000 0.00 0.0 36.34 3.36 F
2535 3788 3.188460 ACTTGCAACCATTATGTGTCGTC 59.812 43.478 0.00 0.0 0.00 4.20 F
3133 4502 0.305617 GCCAAAGCACAAAAAGCTGC 59.694 50.000 0.00 0.0 42.53 5.25 F
4593 7874 1.921869 AAGTAATGTGGCGGAGGGGG 61.922 60.000 0.00 0.0 0.00 5.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1194 1198 1.581602 CAAAGTTCAAACGCACAACCG 59.418 47.619 0.00 0.0 0.00 4.44 R
1667 1671 5.071923 GGCTACTTGAACCTATCCCTACATT 59.928 44.000 0.00 0.0 0.00 2.71 R
2026 2030 6.944290 CAGATGGAGAAGATTGGGCAATATAA 59.056 38.462 0.00 0.0 0.00 0.98 R
2565 3818 5.163540 ACCAAGTAGCTAGTATGTTTCTCGG 60.164 44.000 0.35 0.0 0.00 4.63 R
2614 3868 0.249398 ACCTGGCAACTGTATCGGAC 59.751 55.000 0.00 0.0 37.61 4.79 R
4006 7284 1.741706 CAAATGCTCGAGTGCTGGAAT 59.258 47.619 15.13 0.0 0.00 3.01 R
5030 8311 0.927537 TCGAATATTGTGAAGCCGCG 59.072 50.000 0.00 0.0 0.00 6.46 R
6020 9321 0.320374 TCGACCACGGCATTCTTCTT 59.680 50.000 0.00 0.0 40.21 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.406002 ATTTGGTCGGCGTTGAGGGT 62.406 55.000 6.85 0.00 0.00 4.34
35 36 3.998672 GGTCGGCGTTGAGGGTGA 61.999 66.667 6.85 0.00 0.00 4.02
56 57 1.389609 CCATGCATGGTGAAGGAGCC 61.390 60.000 33.68 0.00 43.05 4.70
64 65 3.003173 TGAAGGAGCCCTGGGTCG 61.003 66.667 15.56 0.00 42.90 4.79
121 122 4.400251 ACCTGGACGGGGAGGAGG 62.400 72.222 0.00 0.00 36.97 4.30
125 126 4.862823 GGACGGGGAGGAGGGGAG 62.863 77.778 0.00 0.00 0.00 4.30
126 127 4.077180 GACGGGGAGGAGGGGAGT 62.077 72.222 0.00 0.00 0.00 3.85
145 146 1.945394 GTAGCCGAGGTCTTCATCGTA 59.055 52.381 2.07 0.00 44.68 3.43
168 169 3.785859 GGTGAGGGGCGCATCAGA 61.786 66.667 19.01 0.00 0.00 3.27
230 231 0.820871 CAGGGAGGAAGAAGGAGACG 59.179 60.000 0.00 0.00 0.00 4.18
277 278 1.604378 CCCTCAGCGACTTGGGATT 59.396 57.895 0.00 0.00 42.11 3.01
280 281 1.339055 CCTCAGCGACTTGGGATTGAA 60.339 52.381 0.00 0.00 0.00 2.69
283 284 1.466167 CAGCGACTTGGGATTGAACTG 59.534 52.381 0.00 0.00 0.00 3.16
337 338 0.179282 CGTTTCTGCGCGTGTAAGAC 60.179 55.000 8.43 0.00 0.00 3.01
338 339 1.137513 GTTTCTGCGCGTGTAAGACT 58.862 50.000 8.43 0.00 0.00 3.24
347 348 2.798499 CGCGTGTAAGACTAAGGGGATG 60.798 54.545 0.00 0.00 0.00 3.51
394 395 0.245539 TCTCCCGTTCGTGGTCAATC 59.754 55.000 0.00 0.00 0.00 2.67
404 405 0.539438 GTGGTCAATCTGTGGGGCAA 60.539 55.000 0.00 0.00 0.00 4.52
405 406 0.251297 TGGTCAATCTGTGGGGCAAG 60.251 55.000 0.00 0.00 0.00 4.01
409 410 0.331278 CAATCTGTGGGGCAAGGGTA 59.669 55.000 0.00 0.00 0.00 3.69
423 424 7.403231 TGGGGCAAGGGTATTTTGATAATTTTA 59.597 33.333 0.00 0.00 0.00 1.52
455 456 2.363683 CCTGACAGAGGGCAAAGAATC 58.636 52.381 3.32 0.00 38.36 2.52
466 467 4.533311 AGGGCAAAGAATCAATGTTCCAAT 59.467 37.500 0.00 0.00 0.00 3.16
470 471 7.064966 GGGCAAAGAATCAATGTTCCAATTAAG 59.935 37.037 0.00 0.00 0.00 1.85
485 486 7.346751 TCCAATTAAGGAGTGGCAAATTATC 57.653 36.000 0.00 0.00 43.20 1.75
530 531 7.201548 GGCAAATTATCAAAGTGCAATGTAAGG 60.202 37.037 0.00 0.00 0.00 2.69
531 532 7.201548 GCAAATTATCAAAGTGCAATGTAAGGG 60.202 37.037 0.00 0.00 0.00 3.95
532 533 3.874392 ATCAAAGTGCAATGTAAGGGC 57.126 42.857 0.00 0.00 0.00 5.19
533 534 1.892474 TCAAAGTGCAATGTAAGGGCC 59.108 47.619 0.00 0.00 0.00 5.80
534 535 1.895131 CAAAGTGCAATGTAAGGGCCT 59.105 47.619 0.00 0.00 0.00 5.19
535 536 3.088532 CAAAGTGCAATGTAAGGGCCTA 58.911 45.455 6.41 0.00 0.00 3.93
536 537 3.669939 AAGTGCAATGTAAGGGCCTAT 57.330 42.857 6.41 0.00 0.00 2.57
537 538 3.669939 AGTGCAATGTAAGGGCCTATT 57.330 42.857 6.41 0.00 0.00 1.73
538 539 3.981212 AGTGCAATGTAAGGGCCTATTT 58.019 40.909 6.41 0.00 0.00 1.40
539 540 3.701040 AGTGCAATGTAAGGGCCTATTTG 59.299 43.478 6.41 9.74 0.00 2.32
540 541 3.699038 GTGCAATGTAAGGGCCTATTTGA 59.301 43.478 6.41 0.00 0.00 2.69
541 542 4.342092 GTGCAATGTAAGGGCCTATTTGAT 59.658 41.667 6.41 0.00 0.00 2.57
542 543 4.961730 TGCAATGTAAGGGCCTATTTGATT 59.038 37.500 6.41 0.00 0.00 2.57
543 544 5.068987 TGCAATGTAAGGGCCTATTTGATTC 59.931 40.000 6.41 0.00 0.00 2.52
544 545 5.762045 CAATGTAAGGGCCTATTTGATTCG 58.238 41.667 6.41 0.00 0.00 3.34
545 546 4.497291 TGTAAGGGCCTATTTGATTCGT 57.503 40.909 6.41 0.00 0.00 3.85
546 547 5.617528 TGTAAGGGCCTATTTGATTCGTA 57.382 39.130 6.41 0.00 0.00 3.43
547 548 5.607477 TGTAAGGGCCTATTTGATTCGTAG 58.393 41.667 6.41 0.00 0.00 3.51
548 549 3.771577 AGGGCCTATTTGATTCGTAGG 57.228 47.619 2.82 5.62 38.39 3.18
549 550 3.314693 AGGGCCTATTTGATTCGTAGGA 58.685 45.455 2.82 0.00 37.73 2.94
550 551 3.910627 AGGGCCTATTTGATTCGTAGGAT 59.089 43.478 2.82 0.00 37.73 3.24
551 552 4.351111 AGGGCCTATTTGATTCGTAGGATT 59.649 41.667 2.82 0.00 37.73 3.01
552 553 5.070685 GGGCCTATTTGATTCGTAGGATTT 58.929 41.667 0.84 0.00 37.73 2.17
553 554 5.181433 GGGCCTATTTGATTCGTAGGATTTC 59.819 44.000 0.84 0.00 37.73 2.17
554 555 5.181433 GGCCTATTTGATTCGTAGGATTTCC 59.819 44.000 0.00 0.00 37.73 3.13
555 556 5.763204 GCCTATTTGATTCGTAGGATTTCCA 59.237 40.000 11.59 0.00 37.73 3.53
556 557 6.262273 GCCTATTTGATTCGTAGGATTTCCAA 59.738 38.462 11.59 0.00 37.73 3.53
557 558 7.201785 GCCTATTTGATTCGTAGGATTTCCAAA 60.202 37.037 11.59 0.00 37.73 3.28
558 559 8.682710 CCTATTTGATTCGTAGGATTTCCAAAA 58.317 33.333 0.00 0.00 37.73 2.44
560 561 8.931385 ATTTGATTCGTAGGATTTCCAAAATG 57.069 30.769 0.00 0.00 38.89 2.32
561 562 5.890334 TGATTCGTAGGATTTCCAAAATGC 58.110 37.500 0.00 0.00 38.89 3.56
562 563 4.349663 TTCGTAGGATTTCCAAAATGCG 57.650 40.909 0.00 0.00 38.89 4.73
563 564 2.680841 TCGTAGGATTTCCAAAATGCGG 59.319 45.455 0.00 0.00 38.89 5.69
564 565 2.223479 CGTAGGATTTCCAAAATGCGGG 60.223 50.000 0.00 0.00 38.89 6.13
565 566 2.230130 AGGATTTCCAAAATGCGGGA 57.770 45.000 0.00 0.00 38.89 5.14
566 567 2.534990 AGGATTTCCAAAATGCGGGAA 58.465 42.857 0.00 0.00 41.27 3.97
567 568 3.106827 AGGATTTCCAAAATGCGGGAAT 58.893 40.909 0.00 0.00 42.44 3.01
568 569 4.285863 AGGATTTCCAAAATGCGGGAATA 58.714 39.130 0.00 0.00 42.44 1.75
569 570 4.342092 AGGATTTCCAAAATGCGGGAATAG 59.658 41.667 0.00 0.00 42.44 1.73
570 571 4.501400 GGATTTCCAAAATGCGGGAATAGG 60.501 45.833 0.00 0.00 42.44 2.57
571 572 3.374042 TTCCAAAATGCGGGAATAGGA 57.626 42.857 0.00 0.00 38.23 2.94
572 573 3.374042 TCCAAAATGCGGGAATAGGAA 57.626 42.857 0.00 0.00 0.00 3.36
573 574 3.702792 TCCAAAATGCGGGAATAGGAAA 58.297 40.909 0.00 0.00 0.00 3.13
574 575 4.090090 TCCAAAATGCGGGAATAGGAAAA 58.910 39.130 0.00 0.00 0.00 2.29
575 576 4.081917 TCCAAAATGCGGGAATAGGAAAAC 60.082 41.667 0.00 0.00 0.00 2.43
576 577 4.180817 CAAAATGCGGGAATAGGAAAACC 58.819 43.478 0.00 0.00 0.00 3.27
577 578 1.675552 ATGCGGGAATAGGAAAACCG 58.324 50.000 0.00 0.00 46.78 4.44
578 579 0.325602 TGCGGGAATAGGAAAACCGT 59.674 50.000 0.00 0.00 45.85 4.83
579 580 0.730840 GCGGGAATAGGAAAACCGTG 59.269 55.000 0.00 0.00 45.85 4.94
580 581 1.375551 CGGGAATAGGAAAACCGTGG 58.624 55.000 0.00 0.00 39.70 4.94
581 582 1.758936 GGGAATAGGAAAACCGTGGG 58.241 55.000 0.00 0.00 0.00 4.61
582 583 1.282738 GGGAATAGGAAAACCGTGGGA 59.717 52.381 0.00 0.00 0.00 4.37
583 584 2.092049 GGGAATAGGAAAACCGTGGGAT 60.092 50.000 0.00 0.00 0.00 3.85
584 585 3.626475 GGGAATAGGAAAACCGTGGGATT 60.626 47.826 0.00 0.00 0.00 3.01
585 586 4.385532 GGGAATAGGAAAACCGTGGGATTA 60.386 45.833 0.00 0.00 0.00 1.75
586 587 4.820173 GGAATAGGAAAACCGTGGGATTAG 59.180 45.833 0.00 0.00 0.00 1.73
587 588 5.397109 GGAATAGGAAAACCGTGGGATTAGA 60.397 44.000 0.00 0.00 0.00 2.10
588 589 3.629142 AGGAAAACCGTGGGATTAGAG 57.371 47.619 0.00 0.00 0.00 2.43
589 590 2.910977 AGGAAAACCGTGGGATTAGAGT 59.089 45.455 0.00 0.00 0.00 3.24
590 591 3.007635 GGAAAACCGTGGGATTAGAGTG 58.992 50.000 0.00 0.00 0.00 3.51
591 592 2.781681 AAACCGTGGGATTAGAGTGG 57.218 50.000 0.00 0.00 0.00 4.00
592 593 0.252197 AACCGTGGGATTAGAGTGGC 59.748 55.000 0.00 0.00 0.00 5.01
593 594 0.907704 ACCGTGGGATTAGAGTGGCA 60.908 55.000 0.00 0.00 0.00 4.92
594 595 0.469917 CCGTGGGATTAGAGTGGCAT 59.530 55.000 0.00 0.00 0.00 4.40
595 596 1.586422 CGTGGGATTAGAGTGGCATG 58.414 55.000 0.00 0.00 0.00 4.06
596 597 1.134401 CGTGGGATTAGAGTGGCATGT 60.134 52.381 0.00 0.00 0.00 3.21
597 598 2.565841 GTGGGATTAGAGTGGCATGTC 58.434 52.381 0.00 0.00 0.00 3.06
598 599 2.092968 GTGGGATTAGAGTGGCATGTCA 60.093 50.000 0.00 0.00 0.00 3.58
599 600 2.779430 TGGGATTAGAGTGGCATGTCAT 59.221 45.455 1.89 0.00 0.00 3.06
600 601 3.181451 TGGGATTAGAGTGGCATGTCATC 60.181 47.826 1.89 2.36 0.00 2.92
601 602 3.072184 GGGATTAGAGTGGCATGTCATCT 59.928 47.826 1.89 10.10 0.00 2.90
602 603 4.445448 GGGATTAGAGTGGCATGTCATCTT 60.445 45.833 1.89 0.00 0.00 2.40
603 604 4.514441 GGATTAGAGTGGCATGTCATCTTG 59.486 45.833 1.89 0.00 0.00 3.02
604 605 4.824479 TTAGAGTGGCATGTCATCTTGA 57.176 40.909 1.89 0.00 0.00 3.02
605 606 3.708403 AGAGTGGCATGTCATCTTGAA 57.292 42.857 1.89 0.00 0.00 2.69
606 607 4.232188 AGAGTGGCATGTCATCTTGAAT 57.768 40.909 1.89 0.00 0.00 2.57
607 608 4.197750 AGAGTGGCATGTCATCTTGAATC 58.802 43.478 1.89 0.00 0.00 2.52
608 609 3.285484 AGTGGCATGTCATCTTGAATCC 58.715 45.455 1.89 0.00 0.00 3.01
609 610 3.053842 AGTGGCATGTCATCTTGAATCCT 60.054 43.478 1.89 0.00 0.00 3.24
610 611 4.164796 AGTGGCATGTCATCTTGAATCCTA 59.835 41.667 1.89 0.00 0.00 2.94
611 612 4.274459 GTGGCATGTCATCTTGAATCCTAC 59.726 45.833 1.89 0.00 0.00 3.18
612 613 4.080413 TGGCATGTCATCTTGAATCCTACA 60.080 41.667 0.00 0.00 0.00 2.74
613 614 4.514441 GGCATGTCATCTTGAATCCTACAG 59.486 45.833 0.00 0.00 0.00 2.74
614 615 5.363101 GCATGTCATCTTGAATCCTACAGA 58.637 41.667 0.00 0.00 0.00 3.41
615 616 5.819379 GCATGTCATCTTGAATCCTACAGAA 59.181 40.000 0.00 0.00 0.00 3.02
616 617 6.485984 GCATGTCATCTTGAATCCTACAGAAT 59.514 38.462 0.00 0.00 0.00 2.40
617 618 7.013083 GCATGTCATCTTGAATCCTACAGAATT 59.987 37.037 0.00 0.00 0.00 2.17
618 619 7.854557 TGTCATCTTGAATCCTACAGAATTG 57.145 36.000 0.00 0.00 0.00 2.32
619 620 7.397221 TGTCATCTTGAATCCTACAGAATTGT 58.603 34.615 0.00 0.00 41.39 2.71
620 621 8.539544 TGTCATCTTGAATCCTACAGAATTGTA 58.460 33.333 0.00 0.00 38.76 2.41
621 622 9.553064 GTCATCTTGAATCCTACAGAATTGTAT 57.447 33.333 0.00 0.00 39.00 2.29
622 623 9.551734 TCATCTTGAATCCTACAGAATTGTATG 57.448 33.333 0.00 0.00 39.00 2.39
623 624 9.551734 CATCTTGAATCCTACAGAATTGTATGA 57.448 33.333 0.00 0.00 39.00 2.15
624 625 9.775854 ATCTTGAATCCTACAGAATTGTATGAG 57.224 33.333 0.00 0.00 37.68 2.90
625 626 8.762645 TCTTGAATCCTACAGAATTGTATGAGT 58.237 33.333 0.00 0.00 37.68 3.41
626 627 8.722480 TTGAATCCTACAGAATTGTATGAGTG 57.278 34.615 0.00 0.00 37.68 3.51
627 628 7.851228 TGAATCCTACAGAATTGTATGAGTGT 58.149 34.615 0.00 0.00 37.68 3.55
628 629 8.321353 TGAATCCTACAGAATTGTATGAGTGTT 58.679 33.333 0.00 0.00 37.68 3.32
629 630 9.167311 GAATCCTACAGAATTGTATGAGTGTTT 57.833 33.333 0.00 0.00 37.68 2.83
630 631 7.905604 TCCTACAGAATTGTATGAGTGTTTG 57.094 36.000 0.00 0.00 39.00 2.93
631 632 7.676004 TCCTACAGAATTGTATGAGTGTTTGA 58.324 34.615 0.00 0.00 39.00 2.69
632 633 8.321353 TCCTACAGAATTGTATGAGTGTTTGAT 58.679 33.333 0.00 0.00 39.00 2.57
633 634 8.950210 CCTACAGAATTGTATGAGTGTTTGATT 58.050 33.333 0.00 0.00 39.00 2.57
634 635 9.764870 CTACAGAATTGTATGAGTGTTTGATTG 57.235 33.333 0.00 0.00 39.00 2.67
635 636 8.169977 ACAGAATTGTATGAGTGTTTGATTGT 57.830 30.769 0.00 0.00 35.25 2.71
636 637 8.077991 ACAGAATTGTATGAGTGTTTGATTGTG 58.922 33.333 0.00 0.00 35.25 3.33
637 638 7.061441 CAGAATTGTATGAGTGTTTGATTGTGC 59.939 37.037 0.00 0.00 0.00 4.57
638 639 5.764487 TTGTATGAGTGTTTGATTGTGCA 57.236 34.783 0.00 0.00 0.00 4.57
639 640 5.963176 TGTATGAGTGTTTGATTGTGCAT 57.037 34.783 0.00 0.00 0.00 3.96
640 641 7.446001 TTGTATGAGTGTTTGATTGTGCATA 57.554 32.000 0.00 0.00 0.00 3.14
641 642 7.075674 TGTATGAGTGTTTGATTGTGCATAG 57.924 36.000 0.00 0.00 0.00 2.23
642 643 5.571784 ATGAGTGTTTGATTGTGCATAGG 57.428 39.130 0.00 0.00 0.00 2.57
643 644 4.650734 TGAGTGTTTGATTGTGCATAGGA 58.349 39.130 0.00 0.00 0.00 2.94
644 645 5.069318 TGAGTGTTTGATTGTGCATAGGAA 58.931 37.500 0.00 0.00 0.00 3.36
645 646 5.534278 TGAGTGTTTGATTGTGCATAGGAAA 59.466 36.000 0.00 0.00 0.00 3.13
646 647 6.040278 TGAGTGTTTGATTGTGCATAGGAAAA 59.960 34.615 0.00 0.00 0.00 2.29
647 648 6.815089 AGTGTTTGATTGTGCATAGGAAAAA 58.185 32.000 0.00 0.00 0.00 1.94
648 649 6.701400 AGTGTTTGATTGTGCATAGGAAAAAC 59.299 34.615 0.00 0.00 0.00 2.43
649 650 5.689514 TGTTTGATTGTGCATAGGAAAAACG 59.310 36.000 0.00 0.00 0.00 3.60
650 651 5.446143 TTGATTGTGCATAGGAAAAACGT 57.554 34.783 0.00 0.00 0.00 3.99
651 652 6.561737 TTGATTGTGCATAGGAAAAACGTA 57.438 33.333 0.00 0.00 0.00 3.57
652 653 6.176975 TGATTGTGCATAGGAAAAACGTAG 57.823 37.500 0.00 0.00 0.00 3.51
653 654 5.123186 TGATTGTGCATAGGAAAAACGTAGG 59.877 40.000 0.00 0.00 0.00 3.18
654 655 4.274602 TGTGCATAGGAAAAACGTAGGA 57.725 40.909 0.00 0.00 0.00 2.94
655 656 4.839121 TGTGCATAGGAAAAACGTAGGAT 58.161 39.130 0.00 0.00 0.00 3.24
656 657 5.250200 TGTGCATAGGAAAAACGTAGGATT 58.750 37.500 0.00 0.00 0.00 3.01
657 658 5.123186 TGTGCATAGGAAAAACGTAGGATTG 59.877 40.000 0.00 0.00 0.00 2.67
658 659 5.123344 GTGCATAGGAAAAACGTAGGATTGT 59.877 40.000 0.00 0.00 0.00 2.71
659 660 5.708230 TGCATAGGAAAAACGTAGGATTGTT 59.292 36.000 0.00 0.00 0.00 2.83
660 661 6.207810 TGCATAGGAAAAACGTAGGATTGTTT 59.792 34.615 0.00 0.00 39.84 2.83
661 662 6.745907 GCATAGGAAAAACGTAGGATTGTTTC 59.254 38.462 0.00 0.00 37.31 2.78
662 663 7.574217 GCATAGGAAAAACGTAGGATTGTTTCA 60.574 37.037 0.00 0.00 37.31 2.69
663 664 6.702716 AGGAAAAACGTAGGATTGTTTCAA 57.297 33.333 0.00 0.00 37.31 2.69
664 665 7.102847 AGGAAAAACGTAGGATTGTTTCAAA 57.897 32.000 0.00 0.00 37.31 2.69
665 666 7.200455 AGGAAAAACGTAGGATTGTTTCAAAG 58.800 34.615 0.00 0.00 37.31 2.77
666 667 7.067737 AGGAAAAACGTAGGATTGTTTCAAAGA 59.932 33.333 0.00 0.00 37.31 2.52
667 668 7.378728 GGAAAAACGTAGGATTGTTTCAAAGAG 59.621 37.037 0.00 0.00 37.31 2.85
668 669 5.941948 AACGTAGGATTGTTTCAAAGAGG 57.058 39.130 0.00 0.00 0.00 3.69
669 670 4.969484 ACGTAGGATTGTTTCAAAGAGGT 58.031 39.130 0.00 0.00 0.00 3.85
670 671 5.374071 ACGTAGGATTGTTTCAAAGAGGTT 58.626 37.500 0.00 0.00 0.00 3.50
671 672 5.826208 ACGTAGGATTGTTTCAAAGAGGTTT 59.174 36.000 0.00 0.00 0.00 3.27
672 673 6.142817 CGTAGGATTGTTTCAAAGAGGTTTG 58.857 40.000 0.00 0.00 43.96 2.93
680 681 2.833794 TCAAAGAGGTTTGAGTGGACG 58.166 47.619 0.00 0.00 45.82 4.79
681 682 1.873591 CAAAGAGGTTTGAGTGGACGG 59.126 52.381 0.00 0.00 45.22 4.79
682 683 1.420430 AAGAGGTTTGAGTGGACGGA 58.580 50.000 0.00 0.00 0.00 4.69
683 684 1.420430 AGAGGTTTGAGTGGACGGAA 58.580 50.000 0.00 0.00 0.00 4.30
684 685 1.766496 AGAGGTTTGAGTGGACGGAAA 59.234 47.619 0.00 0.00 0.00 3.13
685 686 2.372172 AGAGGTTTGAGTGGACGGAAAT 59.628 45.455 0.00 0.00 0.00 2.17
686 687 3.146847 GAGGTTTGAGTGGACGGAAATT 58.853 45.455 0.00 0.00 0.00 1.82
687 688 3.562182 AGGTTTGAGTGGACGGAAATTT 58.438 40.909 0.00 0.00 0.00 1.82
688 689 3.568430 AGGTTTGAGTGGACGGAAATTTC 59.432 43.478 9.83 9.83 0.00 2.17
689 690 3.305131 GGTTTGAGTGGACGGAAATTTCC 60.305 47.826 24.90 24.90 44.05 3.13
690 691 3.502123 TTGAGTGGACGGAAATTTCCT 57.498 42.857 29.85 19.04 45.33 3.36
691 692 4.627284 TTGAGTGGACGGAAATTTCCTA 57.373 40.909 29.85 13.99 45.33 2.94
692 693 4.837093 TGAGTGGACGGAAATTTCCTAT 57.163 40.909 29.85 20.08 45.33 2.57
693 694 4.513442 TGAGTGGACGGAAATTTCCTATG 58.487 43.478 29.85 19.17 45.33 2.23
694 695 4.224147 TGAGTGGACGGAAATTTCCTATGA 59.776 41.667 29.85 12.38 45.33 2.15
695 696 5.174037 AGTGGACGGAAATTTCCTATGAA 57.826 39.130 29.85 12.54 45.33 2.57
696 697 5.566469 AGTGGACGGAAATTTCCTATGAAA 58.434 37.500 29.85 11.61 45.33 2.69
714 715 9.635520 CCTATGAAATCTAATGCAAATGAATCC 57.364 33.333 0.00 0.00 0.00 3.01
748 749 9.621629 AAATTCATATGGTTTACAATCCTACGA 57.378 29.630 2.13 0.00 0.00 3.43
749 750 9.621629 AATTCATATGGTTTACAATCCTACGAA 57.378 29.630 2.13 0.00 0.00 3.85
750 751 9.793259 ATTCATATGGTTTACAATCCTACGAAT 57.207 29.630 2.13 0.00 0.00 3.34
751 752 8.827177 TCATATGGTTTACAATCCTACGAATC 57.173 34.615 2.13 0.00 0.00 2.52
752 753 8.425703 TCATATGGTTTACAATCCTACGAATCA 58.574 33.333 2.13 0.00 0.00 2.57
753 754 9.051679 CATATGGTTTACAATCCTACGAATCAA 57.948 33.333 0.00 0.00 0.00 2.57
754 755 7.931578 ATGGTTTACAATCCTACGAATCAAA 57.068 32.000 0.00 0.00 0.00 2.69
755 756 7.136289 TGGTTTACAATCCTACGAATCAAAC 57.864 36.000 0.00 0.00 0.00 2.93
756 757 6.711194 TGGTTTACAATCCTACGAATCAAACA 59.289 34.615 0.00 0.00 0.00 2.83
757 758 7.228906 TGGTTTACAATCCTACGAATCAAACAA 59.771 33.333 0.00 0.00 0.00 2.83
758 759 7.749126 GGTTTACAATCCTACGAATCAAACAAG 59.251 37.037 0.00 0.00 0.00 3.16
759 760 5.296813 ACAATCCTACGAATCAAACAAGC 57.703 39.130 0.00 0.00 0.00 4.01
760 761 4.156008 ACAATCCTACGAATCAAACAAGCC 59.844 41.667 0.00 0.00 0.00 4.35
761 762 3.410631 TCCTACGAATCAAACAAGCCA 57.589 42.857 0.00 0.00 0.00 4.75
762 763 3.071479 TCCTACGAATCAAACAAGCCAC 58.929 45.455 0.00 0.00 0.00 5.01
763 764 2.811431 CCTACGAATCAAACAAGCCACA 59.189 45.455 0.00 0.00 0.00 4.17
764 765 3.440173 CCTACGAATCAAACAAGCCACAT 59.560 43.478 0.00 0.00 0.00 3.21
765 766 4.634004 CCTACGAATCAAACAAGCCACATA 59.366 41.667 0.00 0.00 0.00 2.29
766 767 4.685169 ACGAATCAAACAAGCCACATAG 57.315 40.909 0.00 0.00 0.00 2.23
767 768 3.440173 ACGAATCAAACAAGCCACATAGG 59.560 43.478 0.00 0.00 41.84 2.57
768 769 3.689161 CGAATCAAACAAGCCACATAGGA 59.311 43.478 0.00 0.00 41.22 2.94
769 770 4.155826 CGAATCAAACAAGCCACATAGGAA 59.844 41.667 0.00 0.00 41.22 3.36
770 771 5.335583 CGAATCAAACAAGCCACATAGGAAA 60.336 40.000 0.00 0.00 41.22 3.13
771 772 6.418057 AATCAAACAAGCCACATAGGAAAA 57.582 33.333 0.00 0.00 41.22 2.29
772 773 5.860941 TCAAACAAGCCACATAGGAAAAA 57.139 34.783 0.00 0.00 41.22 1.94
773 774 6.418057 TCAAACAAGCCACATAGGAAAAAT 57.582 33.333 0.00 0.00 41.22 1.82
774 775 6.825610 TCAAACAAGCCACATAGGAAAAATT 58.174 32.000 0.00 0.00 41.22 1.82
775 776 6.928492 TCAAACAAGCCACATAGGAAAAATTC 59.072 34.615 0.00 0.00 41.22 2.17
828 829 7.951530 TTGAGAATCCTTTGAATCAAAAAGC 57.048 32.000 9.85 0.00 32.75 3.51
829 830 6.458210 TGAGAATCCTTTGAATCAAAAAGCC 58.542 36.000 9.85 0.00 32.75 4.35
830 831 5.473039 AGAATCCTTTGAATCAAAAAGCCG 58.527 37.500 9.85 0.00 32.75 5.52
831 832 4.871933 ATCCTTTGAATCAAAAAGCCGT 57.128 36.364 9.85 0.00 32.75 5.68
832 833 5.975693 ATCCTTTGAATCAAAAAGCCGTA 57.024 34.783 9.85 0.00 32.75 4.02
833 834 5.776173 TCCTTTGAATCAAAAAGCCGTAA 57.224 34.783 9.85 0.00 32.75 3.18
834 835 5.768317 TCCTTTGAATCAAAAAGCCGTAAG 58.232 37.500 9.85 0.00 32.75 2.34
835 836 5.300792 TCCTTTGAATCAAAAAGCCGTAAGT 59.699 36.000 9.85 0.00 32.75 2.24
836 837 5.983118 CCTTTGAATCAAAAAGCCGTAAGTT 59.017 36.000 9.85 0.00 32.75 2.66
837 838 6.074356 CCTTTGAATCAAAAAGCCGTAAGTTG 60.074 38.462 9.85 0.00 32.75 3.16
838 839 5.508200 TGAATCAAAAAGCCGTAAGTTGT 57.492 34.783 0.00 0.00 0.00 3.32
839 840 5.277825 TGAATCAAAAAGCCGTAAGTTGTG 58.722 37.500 0.00 0.00 0.00 3.33
840 841 3.701532 TCAAAAAGCCGTAAGTTGTGG 57.298 42.857 0.00 0.00 0.00 4.17
849 850 3.971150 CCGTAAGTTGTGGCAAAAATCA 58.029 40.909 0.00 0.00 0.00 2.57
850 851 4.363999 CCGTAAGTTGTGGCAAAAATCAA 58.636 39.130 0.00 0.00 0.00 2.57
851 852 4.806247 CCGTAAGTTGTGGCAAAAATCAAA 59.194 37.500 0.00 0.00 0.00 2.69
852 853 5.465056 CCGTAAGTTGTGGCAAAAATCAAAT 59.535 36.000 0.00 0.00 0.00 2.32
853 854 6.354080 CGTAAGTTGTGGCAAAAATCAAATG 58.646 36.000 0.00 0.00 0.00 2.32
854 855 4.816786 AGTTGTGGCAAAAATCAAATGC 57.183 36.364 0.00 0.00 39.33 3.56
1194 1198 0.391597 TCCACCTGGTTTCGTGACTC 59.608 55.000 0.00 0.00 36.34 3.36
1297 1301 5.796935 CCTCTTGCAATATCTTGTTTGTTCG 59.203 40.000 0.00 0.00 34.69 3.95
1590 1594 3.342377 TGAACAACACTTCACTGTCCA 57.658 42.857 0.00 0.00 0.00 4.02
1667 1671 4.099266 AGCTGCCACTAAAATGTGTTTTCA 59.901 37.500 0.00 0.00 38.44 2.69
1987 1991 5.574443 GCAAGTTTGAACTGATATTTCTGGC 59.426 40.000 0.00 0.00 39.66 4.85
2026 2030 4.422073 TTAATCCGGATGAGTGCTGAAT 57.578 40.909 19.95 0.00 0.00 2.57
2215 2219 5.594317 GGAGTGTTGAAATATATTGCCCACT 59.406 40.000 18.89 18.89 32.42 4.00
2535 3788 3.188460 ACTTGCAACCATTATGTGTCGTC 59.812 43.478 0.00 0.00 0.00 4.20
2613 3867 9.262358 GGTTATTCTTATAGAGTTGCTAGGTTG 57.738 37.037 0.00 0.00 31.33 3.77
2614 3868 9.262358 GTTATTCTTATAGAGTTGCTAGGTTGG 57.738 37.037 0.00 0.00 31.33 3.77
2615 3869 6.869206 TTCTTATAGAGTTGCTAGGTTGGT 57.131 37.500 0.00 0.00 31.33 3.67
2616 3870 6.466885 TCTTATAGAGTTGCTAGGTTGGTC 57.533 41.667 0.00 0.00 31.33 4.02
2667 3921 7.938140 ATAGTTGCCAGCTTTTCTAATACAA 57.062 32.000 0.00 0.00 0.00 2.41
2822 4191 4.811557 GCCGAGATTTCTAATACTGTTGCT 59.188 41.667 0.00 0.00 0.00 3.91
2965 4334 7.147302 ACACCCTTGCTAGGTTTTCTGATATAT 60.147 37.037 13.38 0.00 40.19 0.86
3000 4369 5.598417 AGTTTCCTCAAAAGCAATTACCAGT 59.402 36.000 0.00 0.00 0.00 4.00
3133 4502 0.305617 GCCAAAGCACAAAAAGCTGC 59.694 50.000 0.00 0.00 42.53 5.25
3250 4623 7.093354 TGTTCAAAATTTTATTAGCATCGCCA 58.907 30.769 2.44 0.00 0.00 5.69
3803 7073 7.865706 ATTCATCATAAGGCGTAGTTTCTTT 57.134 32.000 0.00 0.00 0.00 2.52
4221 7500 2.076863 GCTACCTGTGTTGTGGATGAC 58.923 52.381 0.00 0.00 0.00 3.06
4292 7572 2.679639 CGCTATCACCTGTAGGGCAAAA 60.680 50.000 2.53 0.00 40.27 2.44
4293 7573 3.352648 GCTATCACCTGTAGGGCAAAAA 58.647 45.455 2.53 0.00 40.27 1.94
4294 7574 3.954258 GCTATCACCTGTAGGGCAAAAAT 59.046 43.478 2.53 0.00 40.27 1.82
4335 7615 5.466819 CATCTTTCAGCAAATGTCACATGT 58.533 37.500 0.00 0.00 0.00 3.21
4530 7811 7.443879 TCAAGTGCATTCTTGTACATTGAGTTA 59.556 33.333 14.65 0.00 43.44 2.24
4593 7874 1.921869 AAGTAATGTGGCGGAGGGGG 61.922 60.000 0.00 0.00 0.00 5.40
4647 7928 2.508526 CCAAAGAGAGTGAAACAGGGG 58.491 52.381 0.00 0.00 41.43 4.79
4998 8279 7.337942 ACATCTTTGGTTCAGTTGAGAATATCC 59.662 37.037 0.00 0.00 0.00 2.59
5030 8311 6.560253 TGTTTCAATTAGGTTCAAGAGAGC 57.440 37.500 0.00 0.00 0.00 4.09
5138 8419 6.513180 TGTAAGTCGAGACATGTTTCTTTCT 58.487 36.000 13.91 6.85 0.00 2.52
5221 8502 4.556233 TCAGTTGAGTTGTACATTCTCGG 58.444 43.478 17.66 10.76 0.00 4.63
5228 8513 5.872617 TGAGTTGTACATTCTCGGGTTTATG 59.127 40.000 17.66 0.00 0.00 1.90
5369 8654 1.266718 GCGGATCACAGCAACAAAGAA 59.733 47.619 0.00 0.00 37.19 2.52
5542 8827 4.961438 ACTTGAAAGAATTGGCATGGTT 57.039 36.364 0.00 0.00 0.00 3.67
5543 8828 4.634199 ACTTGAAAGAATTGGCATGGTTG 58.366 39.130 0.00 0.00 0.00 3.77
5544 8829 4.101430 ACTTGAAAGAATTGGCATGGTTGT 59.899 37.500 0.00 0.00 0.00 3.32
5545 8830 4.255833 TGAAAGAATTGGCATGGTTGTC 57.744 40.909 0.00 0.00 0.00 3.18
5546 8831 3.896888 TGAAAGAATTGGCATGGTTGTCT 59.103 39.130 0.00 0.00 0.00 3.41
5547 8832 4.344679 TGAAAGAATTGGCATGGTTGTCTT 59.655 37.500 0.00 0.00 0.00 3.01
5548 8833 3.947910 AGAATTGGCATGGTTGTCTTG 57.052 42.857 0.00 0.00 0.00 3.02
5549 8834 2.564062 AGAATTGGCATGGTTGTCTTGG 59.436 45.455 0.00 0.00 0.00 3.61
5550 8835 2.014010 ATTGGCATGGTTGTCTTGGT 57.986 45.000 0.00 0.00 0.00 3.67
5551 8836 2.666272 TTGGCATGGTTGTCTTGGTA 57.334 45.000 0.00 0.00 0.00 3.25
5552 8837 2.897271 TGGCATGGTTGTCTTGGTAT 57.103 45.000 0.00 0.00 0.00 2.73
5553 8838 4.308526 TTGGCATGGTTGTCTTGGTATA 57.691 40.909 0.00 0.00 0.00 1.47
5554 8839 4.308526 TGGCATGGTTGTCTTGGTATAA 57.691 40.909 0.00 0.00 0.00 0.98
5555 8840 4.667573 TGGCATGGTTGTCTTGGTATAAA 58.332 39.130 0.00 0.00 0.00 1.40
5556 8841 5.080337 TGGCATGGTTGTCTTGGTATAAAA 58.920 37.500 0.00 0.00 0.00 1.52
5557 8842 5.047660 TGGCATGGTTGTCTTGGTATAAAAC 60.048 40.000 0.00 0.00 0.00 2.43
5558 8843 5.092781 GCATGGTTGTCTTGGTATAAAACG 58.907 41.667 0.00 0.00 0.00 3.60
5559 8844 5.106475 GCATGGTTGTCTTGGTATAAAACGA 60.106 40.000 0.00 0.00 0.00 3.85
5560 8845 6.404293 GCATGGTTGTCTTGGTATAAAACGAT 60.404 38.462 0.00 0.00 0.00 3.73
5561 8846 6.489127 TGGTTGTCTTGGTATAAAACGATG 57.511 37.500 0.00 0.00 0.00 3.84
5562 8847 5.413213 TGGTTGTCTTGGTATAAAACGATGG 59.587 40.000 0.00 0.00 0.00 3.51
5563 8848 5.329493 GTTGTCTTGGTATAAAACGATGGC 58.671 41.667 0.00 0.00 0.00 4.40
5564 8849 4.839121 TGTCTTGGTATAAAACGATGGCT 58.161 39.130 0.00 0.00 0.00 4.75
5565 8850 5.250200 TGTCTTGGTATAAAACGATGGCTT 58.750 37.500 0.00 0.00 0.00 4.35
5566 8851 5.123186 TGTCTTGGTATAAAACGATGGCTTG 59.877 40.000 0.00 0.00 0.00 4.01
5567 8852 4.638421 TCTTGGTATAAAACGATGGCTTGG 59.362 41.667 0.00 0.00 0.00 3.61
5568 8853 3.958018 TGGTATAAAACGATGGCTTGGT 58.042 40.909 0.00 0.00 0.00 3.67
5609 8894 1.754201 GCTTGGTTGGAACTGGAAGGT 60.754 52.381 0.00 0.00 39.30 3.50
5654 8939 5.705609 TCCTTTTTGGATGTGTTAGAAGC 57.294 39.130 0.00 0.00 40.56 3.86
5656 8941 4.023193 CCTTTTTGGATGTGTTAGAAGCGT 60.023 41.667 0.00 0.00 38.35 5.07
5672 8959 0.036388 GCGTGAGAGGGATTTGGTGA 60.036 55.000 0.00 0.00 0.00 4.02
5676 8965 3.375299 CGTGAGAGGGATTTGGTGAAATC 59.625 47.826 0.00 0.00 44.74 2.17
5694 8986 5.048782 TGAAATCGTTGTTATTGCTTGAGCT 60.049 36.000 4.44 0.00 42.66 4.09
5715 9007 5.069251 AGCTTCGTGGGCATATATATAGGAC 59.931 44.000 8.56 5.11 0.00 3.85
5777 9070 7.989947 ATTCCTAGTCTAACCTATGTTTCCA 57.010 36.000 0.00 0.00 35.87 3.53
5779 9072 7.989947 TCCTAGTCTAACCTATGTTTCCAAT 57.010 36.000 0.00 0.00 35.87 3.16
5780 9073 8.019656 TCCTAGTCTAACCTATGTTTCCAATC 57.980 38.462 0.00 0.00 35.87 2.67
5921 9221 1.053835 TGGAGTTGTGGCTGGAGTGA 61.054 55.000 0.00 0.00 0.00 3.41
5948 9249 1.544691 GACGAGGTTGCTCAAGTAGGA 59.455 52.381 0.00 0.00 0.00 2.94
5980 9281 2.442188 GCCGTTTGTCGAGGTAGCG 61.442 63.158 0.00 0.00 42.86 4.26
6001 9302 0.614979 AGAGCGTATGGTGGTGGAGT 60.615 55.000 0.00 0.00 0.00 3.85
6020 9321 2.108514 CGTGGTCGAGGTAGCCGTA 61.109 63.158 0.00 0.00 39.71 4.02
6021 9322 1.647545 CGTGGTCGAGGTAGCCGTAA 61.648 60.000 0.00 0.00 39.71 3.18
6082 9383 3.358076 GAGGAAGTCGCCGTGGAGG 62.358 68.421 0.00 0.00 44.97 4.30
6134 9462 1.803289 GCCGGGAAGAAGATGTTGC 59.197 57.895 2.18 0.00 0.00 4.17
6196 9524 3.923864 TGGACGAAGGCACGCACT 61.924 61.111 0.00 0.00 36.70 4.40
6269 9597 2.281761 CGCACCAGGCTTCCAAGT 60.282 61.111 0.00 0.00 41.67 3.16
6338 9667 1.517832 GCATGCGTAGACTGGGACT 59.482 57.895 0.00 0.00 0.00 3.85
6452 9783 0.672711 GCCCTTGGTTGTCGGAGTAC 60.673 60.000 0.00 0.00 0.00 2.73
6458 9789 1.408340 TGGTTGTCGGAGTACACGAAA 59.592 47.619 13.18 6.52 42.55 3.46
6473 9804 2.150397 CGAAATGGTCGGGGTAGATC 57.850 55.000 0.00 0.00 46.45 2.75
6474 9805 1.687123 CGAAATGGTCGGGGTAGATCT 59.313 52.381 0.00 0.00 46.45 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 1.644786 CCCTCAACGCCGACCAAATC 61.645 60.000 0.00 0.00 0.00 2.17
25 26 0.682209 ATGCATGGCTCACCCTCAAC 60.682 55.000 0.00 0.00 33.59 3.18
27 28 1.077285 CATGCATGGCTCACCCTCA 60.077 57.895 19.40 0.00 33.59 3.86
47 48 3.003173 CGACCCAGGGCTCCTTCA 61.003 66.667 4.91 0.00 0.00 3.02
49 50 3.003763 GTCGACCCAGGGCTCCTT 61.004 66.667 4.91 0.00 0.00 3.36
64 65 4.609247 CGGATCGAGGTCGCCGTC 62.609 72.222 9.47 1.83 39.17 4.79
102 103 3.596799 TCCTCCCCGTCCAGGTCA 61.597 66.667 0.00 0.00 38.74 4.02
103 104 2.760385 CTCCTCCCCGTCCAGGTC 60.760 72.222 0.00 0.00 38.74 3.85
121 122 0.683504 TGAAGACCTCGGCTACTCCC 60.684 60.000 0.00 0.00 0.00 4.30
122 123 1.338655 GATGAAGACCTCGGCTACTCC 59.661 57.143 0.00 0.00 0.00 3.85
123 124 1.002251 CGATGAAGACCTCGGCTACTC 60.002 57.143 0.00 0.00 32.24 2.59
124 125 1.025812 CGATGAAGACCTCGGCTACT 58.974 55.000 0.00 0.00 32.24 2.57
125 126 0.739561 ACGATGAAGACCTCGGCTAC 59.260 55.000 0.00 0.00 38.19 3.58
126 127 2.158856 TCTACGATGAAGACCTCGGCTA 60.159 50.000 0.00 0.00 38.19 3.93
166 167 0.394625 GACGACCTGGGCTACTCTCT 60.395 60.000 0.00 0.00 0.00 3.10
168 169 1.749638 CGACGACCTGGGCTACTCT 60.750 63.158 0.00 0.00 0.00 3.24
215 216 1.331399 CCCCCGTCTCCTTCTTCCTC 61.331 65.000 0.00 0.00 0.00 3.71
218 219 1.990614 AGCCCCCGTCTCCTTCTTC 60.991 63.158 0.00 0.00 0.00 2.87
219 220 2.122954 AGCCCCCGTCTCCTTCTT 59.877 61.111 0.00 0.00 0.00 2.52
220 221 2.685380 CAGCCCCCGTCTCCTTCT 60.685 66.667 0.00 0.00 0.00 2.85
266 267 2.289694 ACTCCAGTTCAATCCCAAGTCG 60.290 50.000 0.00 0.00 0.00 4.18
277 278 2.649034 GACGGCGACTCCAGTTCA 59.351 61.111 16.62 0.00 34.01 3.18
280 281 3.374402 CTGGACGGCGACTCCAGT 61.374 66.667 28.72 0.98 44.23 4.00
283 284 2.799371 CTACTGGACGGCGACTCC 59.201 66.667 16.62 12.35 0.00 3.85
307 308 1.901650 GCAGAAACGCCAGAAGACGG 61.902 60.000 0.00 0.00 0.00 4.79
347 348 2.511600 CGTTCACATCCCGGGCTC 60.512 66.667 18.49 0.00 0.00 4.70
359 360 4.415332 GAGGCGGTCGCTCGTTCA 62.415 66.667 15.04 0.00 41.60 3.18
381 382 1.156736 CCCACAGATTGACCACGAAC 58.843 55.000 0.00 0.00 0.00 3.95
394 395 1.550072 CAAAATACCCTTGCCCCACAG 59.450 52.381 0.00 0.00 0.00 3.66
404 405 9.722317 TCCCACATAAAATTATCAAAATACCCT 57.278 29.630 0.00 0.00 0.00 4.34
405 406 9.758651 GTCCCACATAAAATTATCAAAATACCC 57.241 33.333 0.00 0.00 0.00 3.69
409 410 8.386012 TGGGTCCCACATAAAATTATCAAAAT 57.614 30.769 6.47 0.00 0.00 1.82
442 443 3.511146 TGGAACATTGATTCTTTGCCCTC 59.489 43.478 0.00 0.00 0.00 4.30
451 452 7.260603 CCACTCCTTAATTGGAACATTGATTC 58.739 38.462 0.00 0.00 39.30 2.52
455 456 4.220382 TGCCACTCCTTAATTGGAACATTG 59.780 41.667 0.00 0.00 39.30 2.82
466 467 9.249053 TGTATTTGATAATTTGCCACTCCTTAA 57.751 29.630 0.00 0.00 0.00 1.85
470 471 8.416329 AGATTGTATTTGATAATTTGCCACTCC 58.584 33.333 0.00 0.00 0.00 3.85
514 515 1.895131 AGGCCCTTACATTGCACTTTG 59.105 47.619 0.00 0.00 0.00 2.77
530 531 5.181433 GGAAATCCTACGAATCAAATAGGCC 59.819 44.000 0.00 0.00 36.23 5.19
531 532 5.763204 TGGAAATCCTACGAATCAAATAGGC 59.237 40.000 0.44 0.00 36.23 3.93
532 533 7.801716 TTGGAAATCCTACGAATCAAATAGG 57.198 36.000 0.44 0.00 37.42 2.57
535 536 7.492344 GCATTTTGGAAATCCTACGAATCAAAT 59.508 33.333 0.44 0.00 36.82 2.32
536 537 6.811170 GCATTTTGGAAATCCTACGAATCAAA 59.189 34.615 0.44 0.00 36.82 2.69
537 538 6.329496 GCATTTTGGAAATCCTACGAATCAA 58.671 36.000 0.44 0.00 36.82 2.57
538 539 5.448496 CGCATTTTGGAAATCCTACGAATCA 60.448 40.000 0.44 0.00 36.82 2.57
539 540 4.970003 CGCATTTTGGAAATCCTACGAATC 59.030 41.667 0.44 0.00 36.82 2.52
540 541 4.202010 CCGCATTTTGGAAATCCTACGAAT 60.202 41.667 0.44 0.00 36.82 3.34
541 542 3.127895 CCGCATTTTGGAAATCCTACGAA 59.872 43.478 0.44 0.00 36.82 3.85
542 543 2.680841 CCGCATTTTGGAAATCCTACGA 59.319 45.455 0.44 0.00 36.82 3.43
543 544 2.223479 CCCGCATTTTGGAAATCCTACG 60.223 50.000 0.44 0.00 36.82 3.51
544 545 3.020984 TCCCGCATTTTGGAAATCCTAC 58.979 45.455 0.44 0.00 36.82 3.18
545 546 3.374042 TCCCGCATTTTGGAAATCCTA 57.626 42.857 0.44 0.00 36.82 2.94
546 547 2.230130 TCCCGCATTTTGGAAATCCT 57.770 45.000 0.44 0.00 36.82 3.24
547 548 3.541996 ATTCCCGCATTTTGGAAATCC 57.458 42.857 0.00 0.00 43.50 3.01
548 549 4.340950 TCCTATTCCCGCATTTTGGAAATC 59.659 41.667 0.00 0.00 43.50 2.17
549 550 4.285863 TCCTATTCCCGCATTTTGGAAAT 58.714 39.130 0.00 0.00 43.50 2.17
550 551 3.702792 TCCTATTCCCGCATTTTGGAAA 58.297 40.909 0.00 0.00 43.50 3.13
551 552 3.374042 TCCTATTCCCGCATTTTGGAA 57.626 42.857 0.00 0.00 44.34 3.53
552 553 3.374042 TTCCTATTCCCGCATTTTGGA 57.626 42.857 0.00 0.00 0.00 3.53
553 554 4.180817 GTTTTCCTATTCCCGCATTTTGG 58.819 43.478 0.00 0.00 0.00 3.28
554 555 4.180817 GGTTTTCCTATTCCCGCATTTTG 58.819 43.478 0.00 0.00 36.94 2.44
555 556 3.119280 CGGTTTTCCTATTCCCGCATTTT 60.119 43.478 0.00 0.00 37.95 1.82
556 557 2.425668 CGGTTTTCCTATTCCCGCATTT 59.574 45.455 0.00 0.00 37.95 2.32
557 558 2.021457 CGGTTTTCCTATTCCCGCATT 58.979 47.619 0.00 0.00 37.95 3.56
558 559 1.064979 ACGGTTTTCCTATTCCCGCAT 60.065 47.619 0.00 0.00 42.29 4.73
559 560 0.325602 ACGGTTTTCCTATTCCCGCA 59.674 50.000 0.00 0.00 42.29 5.69
560 561 0.730840 CACGGTTTTCCTATTCCCGC 59.269 55.000 0.00 0.00 42.29 6.13
561 562 1.375551 CCACGGTTTTCCTATTCCCG 58.624 55.000 0.00 0.00 44.06 5.14
562 563 1.282738 TCCCACGGTTTTCCTATTCCC 59.717 52.381 0.00 0.00 37.95 3.97
563 564 2.793288 TCCCACGGTTTTCCTATTCC 57.207 50.000 0.00 0.00 37.95 3.01
564 565 5.677567 TCTAATCCCACGGTTTTCCTATTC 58.322 41.667 0.00 0.00 37.95 1.75
565 566 5.191124 ACTCTAATCCCACGGTTTTCCTATT 59.809 40.000 0.00 0.00 37.95 1.73
566 567 4.720273 ACTCTAATCCCACGGTTTTCCTAT 59.280 41.667 0.00 0.00 37.95 2.57
567 568 4.081309 CACTCTAATCCCACGGTTTTCCTA 60.081 45.833 0.00 0.00 37.95 2.94
568 569 2.910977 ACTCTAATCCCACGGTTTTCCT 59.089 45.455 0.00 0.00 37.95 3.36
569 570 3.007635 CACTCTAATCCCACGGTTTTCC 58.992 50.000 0.00 0.00 0.00 3.13
570 571 3.007635 CCACTCTAATCCCACGGTTTTC 58.992 50.000 0.00 0.00 0.00 2.29
571 572 2.878526 GCCACTCTAATCCCACGGTTTT 60.879 50.000 0.00 0.00 0.00 2.43
572 573 1.339727 GCCACTCTAATCCCACGGTTT 60.340 52.381 0.00 0.00 0.00 3.27
573 574 0.252197 GCCACTCTAATCCCACGGTT 59.748 55.000 0.00 0.00 0.00 4.44
574 575 0.907704 TGCCACTCTAATCCCACGGT 60.908 55.000 0.00 0.00 0.00 4.83
575 576 0.469917 ATGCCACTCTAATCCCACGG 59.530 55.000 0.00 0.00 0.00 4.94
576 577 1.134401 ACATGCCACTCTAATCCCACG 60.134 52.381 0.00 0.00 0.00 4.94
577 578 2.092968 TGACATGCCACTCTAATCCCAC 60.093 50.000 0.00 0.00 0.00 4.61
578 579 2.195727 TGACATGCCACTCTAATCCCA 58.804 47.619 0.00 0.00 0.00 4.37
579 580 3.072184 AGATGACATGCCACTCTAATCCC 59.928 47.826 0.00 0.00 0.00 3.85
580 581 4.348863 AGATGACATGCCACTCTAATCC 57.651 45.455 0.00 0.00 0.00 3.01
581 582 5.363101 TCAAGATGACATGCCACTCTAATC 58.637 41.667 0.00 0.00 0.00 1.75
582 583 5.363562 TCAAGATGACATGCCACTCTAAT 57.636 39.130 0.00 0.00 0.00 1.73
583 584 4.824479 TCAAGATGACATGCCACTCTAA 57.176 40.909 0.00 0.00 0.00 2.10
584 585 4.824479 TTCAAGATGACATGCCACTCTA 57.176 40.909 0.00 0.00 0.00 2.43
585 586 3.708403 TTCAAGATGACATGCCACTCT 57.292 42.857 0.00 0.00 0.00 3.24
586 587 3.314635 GGATTCAAGATGACATGCCACTC 59.685 47.826 0.00 0.00 0.00 3.51
587 588 3.053842 AGGATTCAAGATGACATGCCACT 60.054 43.478 0.00 0.00 0.00 4.00
588 589 3.285484 AGGATTCAAGATGACATGCCAC 58.715 45.455 0.00 0.00 0.00 5.01
589 590 3.657398 AGGATTCAAGATGACATGCCA 57.343 42.857 0.00 0.00 0.00 4.92
590 591 4.454678 TGTAGGATTCAAGATGACATGCC 58.545 43.478 0.00 0.00 0.00 4.40
591 592 5.363101 TCTGTAGGATTCAAGATGACATGC 58.637 41.667 0.00 0.00 0.00 4.06
592 593 8.343366 CAATTCTGTAGGATTCAAGATGACATG 58.657 37.037 0.00 0.00 0.00 3.21
593 594 8.051535 ACAATTCTGTAGGATTCAAGATGACAT 58.948 33.333 0.00 0.00 32.54 3.06
594 595 7.397221 ACAATTCTGTAGGATTCAAGATGACA 58.603 34.615 0.00 0.00 32.54 3.58
595 596 7.856145 ACAATTCTGTAGGATTCAAGATGAC 57.144 36.000 0.00 0.00 32.54 3.06
596 597 9.551734 CATACAATTCTGTAGGATTCAAGATGA 57.448 33.333 0.00 0.00 41.36 2.92
597 598 9.551734 TCATACAATTCTGTAGGATTCAAGATG 57.448 33.333 0.00 0.00 42.36 2.90
598 599 9.775854 CTCATACAATTCTGTAGGATTCAAGAT 57.224 33.333 0.65 0.00 45.17 2.40
599 600 8.762645 ACTCATACAATTCTGTAGGATTCAAGA 58.237 33.333 0.65 0.00 45.17 3.02
600 601 8.824781 CACTCATACAATTCTGTAGGATTCAAG 58.175 37.037 0.65 0.00 45.17 3.02
601 602 8.321353 ACACTCATACAATTCTGTAGGATTCAA 58.679 33.333 0.65 0.00 45.17 2.69
602 603 7.851228 ACACTCATACAATTCTGTAGGATTCA 58.149 34.615 0.65 0.00 45.17 2.57
603 604 8.723942 AACACTCATACAATTCTGTAGGATTC 57.276 34.615 0.65 0.00 45.17 2.52
604 605 8.950210 CAAACACTCATACAATTCTGTAGGATT 58.050 33.333 0.65 0.00 45.17 3.01
605 606 8.321353 TCAAACACTCATACAATTCTGTAGGAT 58.679 33.333 0.65 0.00 45.17 3.24
606 607 7.676004 TCAAACACTCATACAATTCTGTAGGA 58.324 34.615 0.39 0.39 44.38 2.94
607 608 7.905604 TCAAACACTCATACAATTCTGTAGG 57.094 36.000 0.00 0.00 41.33 3.18
608 609 9.764870 CAATCAAACACTCATACAATTCTGTAG 57.235 33.333 0.00 0.00 41.33 2.74
609 610 9.283768 ACAATCAAACACTCATACAATTCTGTA 57.716 29.630 0.00 0.00 42.22 2.74
610 611 8.077991 CACAATCAAACACTCATACAATTCTGT 58.922 33.333 0.00 0.00 39.75 3.41
611 612 7.061441 GCACAATCAAACACTCATACAATTCTG 59.939 37.037 0.00 0.00 0.00 3.02
612 613 7.086376 GCACAATCAAACACTCATACAATTCT 58.914 34.615 0.00 0.00 0.00 2.40
613 614 6.862608 TGCACAATCAAACACTCATACAATTC 59.137 34.615 0.00 0.00 0.00 2.17
614 615 6.747125 TGCACAATCAAACACTCATACAATT 58.253 32.000 0.00 0.00 0.00 2.32
615 616 6.330004 TGCACAATCAAACACTCATACAAT 57.670 33.333 0.00 0.00 0.00 2.71
616 617 5.764487 TGCACAATCAAACACTCATACAA 57.236 34.783 0.00 0.00 0.00 2.41
617 618 5.963176 ATGCACAATCAAACACTCATACA 57.037 34.783 0.00 0.00 0.00 2.29
618 619 6.316140 TCCTATGCACAATCAAACACTCATAC 59.684 38.462 0.00 0.00 0.00 2.39
619 620 6.413892 TCCTATGCACAATCAAACACTCATA 58.586 36.000 0.00 0.00 0.00 2.15
620 621 5.255687 TCCTATGCACAATCAAACACTCAT 58.744 37.500 0.00 0.00 0.00 2.90
621 622 4.650734 TCCTATGCACAATCAAACACTCA 58.349 39.130 0.00 0.00 0.00 3.41
622 623 5.627499 TTCCTATGCACAATCAAACACTC 57.373 39.130 0.00 0.00 0.00 3.51
623 624 6.403866 TTTTCCTATGCACAATCAAACACT 57.596 33.333 0.00 0.00 0.00 3.55
624 625 6.345723 CGTTTTTCCTATGCACAATCAAACAC 60.346 38.462 0.00 0.00 0.00 3.32
625 626 5.689514 CGTTTTTCCTATGCACAATCAAACA 59.310 36.000 0.00 0.00 0.00 2.83
626 627 5.689961 ACGTTTTTCCTATGCACAATCAAAC 59.310 36.000 0.00 0.00 0.00 2.93
627 628 5.837437 ACGTTTTTCCTATGCACAATCAAA 58.163 33.333 0.00 0.00 0.00 2.69
628 629 5.446143 ACGTTTTTCCTATGCACAATCAA 57.554 34.783 0.00 0.00 0.00 2.57
629 630 5.123186 CCTACGTTTTTCCTATGCACAATCA 59.877 40.000 0.00 0.00 0.00 2.57
630 631 5.353123 TCCTACGTTTTTCCTATGCACAATC 59.647 40.000 0.00 0.00 0.00 2.67
631 632 5.250200 TCCTACGTTTTTCCTATGCACAAT 58.750 37.500 0.00 0.00 0.00 2.71
632 633 4.643463 TCCTACGTTTTTCCTATGCACAA 58.357 39.130 0.00 0.00 0.00 3.33
633 634 4.274602 TCCTACGTTTTTCCTATGCACA 57.725 40.909 0.00 0.00 0.00 4.57
634 635 5.123344 ACAATCCTACGTTTTTCCTATGCAC 59.877 40.000 0.00 0.00 0.00 4.57
635 636 5.250200 ACAATCCTACGTTTTTCCTATGCA 58.750 37.500 0.00 0.00 0.00 3.96
636 637 5.813080 ACAATCCTACGTTTTTCCTATGC 57.187 39.130 0.00 0.00 0.00 3.14
637 638 7.812648 TGAAACAATCCTACGTTTTTCCTATG 58.187 34.615 0.00 0.00 35.53 2.23
638 639 7.989416 TGAAACAATCCTACGTTTTTCCTAT 57.011 32.000 0.00 0.00 35.53 2.57
639 640 7.804843 TTGAAACAATCCTACGTTTTTCCTA 57.195 32.000 0.00 0.00 35.53 2.94
640 641 6.702716 TTGAAACAATCCTACGTTTTTCCT 57.297 33.333 0.00 0.00 35.53 3.36
641 642 7.197703 TCTTTGAAACAATCCTACGTTTTTCC 58.802 34.615 0.00 0.00 35.53 3.13
642 643 7.378728 CCTCTTTGAAACAATCCTACGTTTTTC 59.621 37.037 0.00 0.00 35.53 2.29
643 644 7.147966 ACCTCTTTGAAACAATCCTACGTTTTT 60.148 33.333 0.00 0.00 35.53 1.94
644 645 6.320418 ACCTCTTTGAAACAATCCTACGTTTT 59.680 34.615 0.00 0.00 35.53 2.43
645 646 5.826208 ACCTCTTTGAAACAATCCTACGTTT 59.174 36.000 0.00 0.00 38.02 3.60
646 647 5.374071 ACCTCTTTGAAACAATCCTACGTT 58.626 37.500 0.00 0.00 0.00 3.99
647 648 4.969484 ACCTCTTTGAAACAATCCTACGT 58.031 39.130 0.00 0.00 0.00 3.57
648 649 5.941948 AACCTCTTTGAAACAATCCTACG 57.058 39.130 0.00 0.00 0.00 3.51
649 650 7.013369 ACTCAAACCTCTTTGAAACAATCCTAC 59.987 37.037 0.00 0.00 44.18 3.18
650 651 7.013274 CACTCAAACCTCTTTGAAACAATCCTA 59.987 37.037 0.00 0.00 44.18 2.94
651 652 5.893824 ACTCAAACCTCTTTGAAACAATCCT 59.106 36.000 0.00 0.00 44.18 3.24
652 653 5.979517 CACTCAAACCTCTTTGAAACAATCC 59.020 40.000 0.00 0.00 44.18 3.01
653 654 5.979517 CCACTCAAACCTCTTTGAAACAATC 59.020 40.000 0.00 0.00 44.18 2.67
654 655 5.656416 TCCACTCAAACCTCTTTGAAACAAT 59.344 36.000 0.00 0.00 44.18 2.71
655 656 5.013547 TCCACTCAAACCTCTTTGAAACAA 58.986 37.500 0.00 0.00 44.18 2.83
656 657 4.398044 GTCCACTCAAACCTCTTTGAAACA 59.602 41.667 0.00 0.00 44.18 2.83
657 658 4.495844 CGTCCACTCAAACCTCTTTGAAAC 60.496 45.833 0.00 0.00 44.18 2.78
658 659 3.625764 CGTCCACTCAAACCTCTTTGAAA 59.374 43.478 0.00 0.00 44.18 2.69
659 660 3.202906 CGTCCACTCAAACCTCTTTGAA 58.797 45.455 0.00 0.00 44.18 2.69
660 661 2.484770 CCGTCCACTCAAACCTCTTTGA 60.485 50.000 0.00 0.00 42.93 2.69
661 662 1.873591 CCGTCCACTCAAACCTCTTTG 59.126 52.381 0.00 0.00 38.56 2.77
662 663 1.766496 TCCGTCCACTCAAACCTCTTT 59.234 47.619 0.00 0.00 0.00 2.52
663 664 1.420430 TCCGTCCACTCAAACCTCTT 58.580 50.000 0.00 0.00 0.00 2.85
664 665 1.420430 TTCCGTCCACTCAAACCTCT 58.580 50.000 0.00 0.00 0.00 3.69
665 666 2.249844 TTTCCGTCCACTCAAACCTC 57.750 50.000 0.00 0.00 0.00 3.85
666 667 2.951229 ATTTCCGTCCACTCAAACCT 57.049 45.000 0.00 0.00 0.00 3.50
667 668 3.305131 GGAAATTTCCGTCCACTCAAACC 60.305 47.826 21.15 0.00 37.65 3.27
668 669 3.897325 GGAAATTTCCGTCCACTCAAAC 58.103 45.455 21.15 0.00 37.65 2.93
688 689 9.635520 GGATTCATTTGCATTAGATTTCATAGG 57.364 33.333 0.00 0.00 0.00 2.57
722 723 9.621629 TCGTAGGATTGTAAACCATATGAATTT 57.378 29.630 3.65 7.17 0.00 1.82
723 724 9.621629 TTCGTAGGATTGTAAACCATATGAATT 57.378 29.630 3.65 1.30 0.00 2.17
724 725 9.793259 ATTCGTAGGATTGTAAACCATATGAAT 57.207 29.630 3.65 0.00 0.00 2.57
725 726 9.268268 GATTCGTAGGATTGTAAACCATATGAA 57.732 33.333 3.65 0.00 0.00 2.57
726 727 8.425703 TGATTCGTAGGATTGTAAACCATATGA 58.574 33.333 3.65 0.00 0.00 2.15
727 728 8.601845 TGATTCGTAGGATTGTAAACCATATG 57.398 34.615 0.00 0.00 0.00 1.78
728 729 9.621629 TTTGATTCGTAGGATTGTAAACCATAT 57.378 29.630 0.00 0.00 0.00 1.78
729 730 8.885722 GTTTGATTCGTAGGATTGTAAACCATA 58.114 33.333 0.00 0.00 0.00 2.74
730 731 7.392113 TGTTTGATTCGTAGGATTGTAAACCAT 59.608 33.333 0.00 0.00 0.00 3.55
731 732 6.711194 TGTTTGATTCGTAGGATTGTAAACCA 59.289 34.615 0.00 0.00 0.00 3.67
732 733 7.136289 TGTTTGATTCGTAGGATTGTAAACC 57.864 36.000 0.00 0.00 0.00 3.27
733 734 7.270579 GCTTGTTTGATTCGTAGGATTGTAAAC 59.729 37.037 0.00 0.00 0.00 2.01
734 735 7.302524 GCTTGTTTGATTCGTAGGATTGTAAA 58.697 34.615 0.00 0.00 0.00 2.01
735 736 6.128117 GGCTTGTTTGATTCGTAGGATTGTAA 60.128 38.462 0.00 0.00 0.00 2.41
736 737 5.353123 GGCTTGTTTGATTCGTAGGATTGTA 59.647 40.000 0.00 0.00 0.00 2.41
737 738 4.156008 GGCTTGTTTGATTCGTAGGATTGT 59.844 41.667 0.00 0.00 0.00 2.71
738 739 4.155826 TGGCTTGTTTGATTCGTAGGATTG 59.844 41.667 0.00 0.00 0.00 2.67
739 740 4.156008 GTGGCTTGTTTGATTCGTAGGATT 59.844 41.667 0.00 0.00 0.00 3.01
740 741 3.689649 GTGGCTTGTTTGATTCGTAGGAT 59.310 43.478 0.00 0.00 0.00 3.24
741 742 3.071479 GTGGCTTGTTTGATTCGTAGGA 58.929 45.455 0.00 0.00 0.00 2.94
742 743 2.811431 TGTGGCTTGTTTGATTCGTAGG 59.189 45.455 0.00 0.00 0.00 3.18
743 744 4.685169 ATGTGGCTTGTTTGATTCGTAG 57.315 40.909 0.00 0.00 0.00 3.51
744 745 4.634004 CCTATGTGGCTTGTTTGATTCGTA 59.366 41.667 0.00 0.00 0.00 3.43
745 746 3.440173 CCTATGTGGCTTGTTTGATTCGT 59.560 43.478 0.00 0.00 0.00 3.85
746 747 3.689161 TCCTATGTGGCTTGTTTGATTCG 59.311 43.478 0.00 0.00 35.26 3.34
747 748 5.643379 TTCCTATGTGGCTTGTTTGATTC 57.357 39.130 0.00 0.00 35.26 2.52
748 749 6.418057 TTTTCCTATGTGGCTTGTTTGATT 57.582 33.333 0.00 0.00 35.26 2.57
749 750 6.418057 TTTTTCCTATGTGGCTTGTTTGAT 57.582 33.333 0.00 0.00 35.26 2.57
750 751 5.860941 TTTTTCCTATGTGGCTTGTTTGA 57.139 34.783 0.00 0.00 35.26 2.69
751 752 6.147656 GGAATTTTTCCTATGTGGCTTGTTTG 59.852 38.462 0.00 0.00 46.57 2.93
752 753 6.230472 GGAATTTTTCCTATGTGGCTTGTTT 58.770 36.000 0.00 0.00 46.57 2.83
753 754 5.793817 GGAATTTTTCCTATGTGGCTTGTT 58.206 37.500 0.00 0.00 46.57 2.83
754 755 5.405935 GGAATTTTTCCTATGTGGCTTGT 57.594 39.130 0.00 0.00 46.57 3.16
802 803 8.829612 GCTTTTTGATTCAAAGGATTCTCAAAA 58.170 29.630 11.41 0.00 39.49 2.44
803 804 7.442062 GGCTTTTTGATTCAAAGGATTCTCAAA 59.558 33.333 11.41 0.64 34.72 2.69
804 805 6.930722 GGCTTTTTGATTCAAAGGATTCTCAA 59.069 34.615 11.41 1.26 34.72 3.02
805 806 6.458210 GGCTTTTTGATTCAAAGGATTCTCA 58.542 36.000 11.41 0.00 34.72 3.27
806 807 5.574443 CGGCTTTTTGATTCAAAGGATTCTC 59.426 40.000 11.41 0.39 34.72 2.87
807 808 5.011023 ACGGCTTTTTGATTCAAAGGATTCT 59.989 36.000 11.41 0.00 34.72 2.40
808 809 5.230182 ACGGCTTTTTGATTCAAAGGATTC 58.770 37.500 11.41 2.87 34.72 2.52
809 810 5.213891 ACGGCTTTTTGATTCAAAGGATT 57.786 34.783 11.41 0.00 34.72 3.01
810 811 4.871933 ACGGCTTTTTGATTCAAAGGAT 57.128 36.364 11.41 0.00 34.72 3.24
811 812 5.300792 ACTTACGGCTTTTTGATTCAAAGGA 59.699 36.000 11.41 4.92 34.72 3.36
812 813 5.528870 ACTTACGGCTTTTTGATTCAAAGG 58.471 37.500 11.41 9.88 34.72 3.11
813 814 6.475402 ACAACTTACGGCTTTTTGATTCAAAG 59.525 34.615 11.41 3.23 34.72 2.77
814 815 6.254589 CACAACTTACGGCTTTTTGATTCAAA 59.745 34.615 7.74 7.74 0.00 2.69
815 816 5.746245 CACAACTTACGGCTTTTTGATTCAA 59.254 36.000 0.00 0.00 0.00 2.69
816 817 5.277825 CACAACTTACGGCTTTTTGATTCA 58.722 37.500 0.00 0.00 0.00 2.57
817 818 4.679654 CCACAACTTACGGCTTTTTGATTC 59.320 41.667 0.00 0.00 0.00 2.52
818 819 4.616953 CCACAACTTACGGCTTTTTGATT 58.383 39.130 0.00 0.00 0.00 2.57
819 820 3.552068 GCCACAACTTACGGCTTTTTGAT 60.552 43.478 0.00 0.00 42.78 2.57
820 821 2.223618 GCCACAACTTACGGCTTTTTGA 60.224 45.455 0.00 0.00 42.78 2.69
821 822 2.124122 GCCACAACTTACGGCTTTTTG 58.876 47.619 0.00 0.00 42.78 2.44
822 823 1.751924 TGCCACAACTTACGGCTTTTT 59.248 42.857 0.00 0.00 46.39 1.94
823 824 1.394618 TGCCACAACTTACGGCTTTT 58.605 45.000 0.00 0.00 46.39 2.27
824 825 1.394618 TTGCCACAACTTACGGCTTT 58.605 45.000 0.00 0.00 46.39 3.51
825 826 1.394618 TTTGCCACAACTTACGGCTT 58.605 45.000 0.00 0.00 46.39 4.35
826 827 1.394618 TTTTGCCACAACTTACGGCT 58.605 45.000 0.00 0.00 46.39 5.52
827 828 2.211353 TTTTTGCCACAACTTACGGC 57.789 45.000 0.00 0.00 46.43 5.68
828 829 3.971150 TGATTTTTGCCACAACTTACGG 58.029 40.909 0.00 0.00 0.00 4.02
829 830 5.957910 TTTGATTTTTGCCACAACTTACG 57.042 34.783 0.00 0.00 0.00 3.18
830 831 6.135400 GCATTTGATTTTTGCCACAACTTAC 58.865 36.000 0.00 0.00 0.00 2.34
831 832 6.297694 GCATTTGATTTTTGCCACAACTTA 57.702 33.333 0.00 0.00 0.00 2.24
832 833 5.172460 GCATTTGATTTTTGCCACAACTT 57.828 34.783 0.00 0.00 0.00 2.66
833 834 4.816786 GCATTTGATTTTTGCCACAACT 57.183 36.364 0.00 0.00 0.00 3.16
840 841 3.339253 AGAGGGGCATTTGATTTTTGC 57.661 42.857 0.00 0.00 35.64 3.68
841 842 7.607223 TGAAATAAGAGGGGCATTTGATTTTTG 59.393 33.333 0.00 0.00 0.00 2.44
842 843 7.688343 TGAAATAAGAGGGGCATTTGATTTTT 58.312 30.769 0.00 0.00 0.00 1.94
843 844 7.180766 TCTGAAATAAGAGGGGCATTTGATTTT 59.819 33.333 0.00 0.00 0.00 1.82
844 845 6.669154 TCTGAAATAAGAGGGGCATTTGATTT 59.331 34.615 0.00 0.00 0.00 2.17
845 846 6.197168 TCTGAAATAAGAGGGGCATTTGATT 58.803 36.000 0.00 0.00 0.00 2.57
846 847 5.769835 TCTGAAATAAGAGGGGCATTTGAT 58.230 37.500 0.00 0.00 0.00 2.57
847 848 5.191727 TCTGAAATAAGAGGGGCATTTGA 57.808 39.130 0.00 0.00 0.00 2.69
848 849 5.010415 GGATCTGAAATAAGAGGGGCATTTG 59.990 44.000 0.00 0.00 0.00 2.32
849 850 5.143369 GGATCTGAAATAAGAGGGGCATTT 58.857 41.667 0.00 0.00 0.00 2.32
850 851 4.734266 GGATCTGAAATAAGAGGGGCATT 58.266 43.478 0.00 0.00 0.00 3.56
851 852 3.244700 CGGATCTGAAATAAGAGGGGCAT 60.245 47.826 0.00 0.00 0.00 4.40
852 853 2.104792 CGGATCTGAAATAAGAGGGGCA 59.895 50.000 0.00 0.00 0.00 5.36
853 854 2.551071 CCGGATCTGAAATAAGAGGGGC 60.551 54.545 2.08 0.00 0.00 5.80
854 855 2.039084 CCCGGATCTGAAATAAGAGGGG 59.961 54.545 0.73 0.00 32.21 4.79
855 856 2.706190 ACCCGGATCTGAAATAAGAGGG 59.294 50.000 0.73 0.00 35.98 4.30
856 857 3.643792 AGACCCGGATCTGAAATAAGAGG 59.356 47.826 0.00 0.00 0.00 3.69
857 858 4.946478 AGACCCGGATCTGAAATAAGAG 57.054 45.455 0.00 0.00 0.00 2.85
969 970 1.118356 CCGGATCCCCTCTCCTTCAG 61.118 65.000 6.06 0.00 0.00 3.02
1194 1198 1.581602 CAAAGTTCAAACGCACAACCG 59.418 47.619 0.00 0.00 0.00 4.44
1297 1301 6.038271 ACGAATGCAGACCAAAGAATAATACC 59.962 38.462 0.00 0.00 0.00 2.73
1590 1594 7.546667 CAGTAAATTTATTTGCCATGCTTCAGT 59.453 33.333 0.31 0.00 33.61 3.41
1667 1671 5.071923 GGCTACTTGAACCTATCCCTACATT 59.928 44.000 0.00 0.00 0.00 2.71
1987 1991 9.594038 CCGGATTAATGTAAAGATAAAACATCG 57.406 33.333 0.00 0.00 32.80 3.84
2026 2030 6.944290 CAGATGGAGAAGATTGGGCAATATAA 59.056 38.462 0.00 0.00 0.00 0.98
2565 3818 5.163540 ACCAAGTAGCTAGTATGTTTCTCGG 60.164 44.000 0.35 0.00 0.00 4.63
2613 3867 0.462047 CCTGGCAACTGTATCGGACC 60.462 60.000 0.00 0.00 37.61 4.46
2614 3868 0.249398 ACCTGGCAACTGTATCGGAC 59.751 55.000 0.00 0.00 37.61 4.79
2615 3869 0.981183 AACCTGGCAACTGTATCGGA 59.019 50.000 0.00 0.00 37.61 4.55
2616 3870 2.684001 TAACCTGGCAACTGTATCGG 57.316 50.000 0.00 0.00 37.61 4.18
2667 3921 7.438160 GGTATTTGCTTTAGAAAAACTTGCAGT 59.562 33.333 0.00 0.00 32.98 4.40
2822 4191 7.501225 AGCCAGTACTTGCTTTAAAAGAACTTA 59.499 33.333 15.42 0.00 32.94 2.24
2965 4334 6.404293 GCTTTTGAGGAAACTGTCAACTACAA 60.404 38.462 0.00 0.00 44.43 2.41
3000 4369 4.960938 AGTTGATAGCTGCATCGGATAAA 58.039 39.130 1.02 0.00 0.00 1.40
3098 4467 3.228017 GCCCTCTACTCCGGGAGC 61.228 72.222 23.84 5.15 43.44 4.70
3250 4623 7.148641 CGTGGTATGAGTATAAGAGATTGCTT 58.851 38.462 0.00 0.00 0.00 3.91
4006 7284 1.741706 CAAATGCTCGAGTGCTGGAAT 59.258 47.619 15.13 0.00 0.00 3.01
4221 7500 3.457610 AAACAAGTTGCACCTTCCATG 57.542 42.857 1.81 0.00 0.00 3.66
4272 7552 2.710096 TTTGCCCTACAGGTGATAGC 57.290 50.000 0.00 0.00 38.26 2.97
4292 7572 6.426587 AGATGCAACCAACAGTATTAGGATT 58.573 36.000 0.00 0.00 0.00 3.01
4293 7573 6.006275 AGATGCAACCAACAGTATTAGGAT 57.994 37.500 0.00 0.00 0.00 3.24
4294 7574 5.435686 AGATGCAACCAACAGTATTAGGA 57.564 39.130 0.00 0.00 0.00 2.94
4561 7842 5.572896 GCCACATTACTTCAACAAGCATAAC 59.427 40.000 0.00 0.00 32.09 1.89
4593 7874 3.492337 AGATACCGGACCAGAAGAGATC 58.508 50.000 9.46 0.00 0.00 2.75
4647 7928 3.090532 ACCCGCTTCCTGGATCCC 61.091 66.667 9.90 0.00 0.00 3.85
4979 8260 4.536090 ACCAGGATATTCTCAACTGAACCA 59.464 41.667 0.00 0.00 0.00 3.67
4998 8279 9.757227 TTGAACCTAATTGAAACAAATAACCAG 57.243 29.630 0.00 0.00 0.00 4.00
5030 8311 0.927537 TCGAATATTGTGAAGCCGCG 59.072 50.000 0.00 0.00 0.00 6.46
5221 8502 8.918202 TGTTGATACCCTGATAATCATAAACC 57.082 34.615 0.00 0.00 30.17 3.27
5228 8513 8.902540 TGTACAATGTTGATACCCTGATAATC 57.097 34.615 0.00 0.00 0.00 1.75
5330 8615 4.740822 GGTGGCGGGCTTGTGGAT 62.741 66.667 2.38 0.00 0.00 3.41
5529 8814 2.299867 ACCAAGACAACCATGCCAATTC 59.700 45.455 0.00 0.00 0.00 2.17
5542 8827 4.839121 AGCCATCGTTTTATACCAAGACA 58.161 39.130 0.00 0.00 0.00 3.41
5543 8828 5.448632 CCAAGCCATCGTTTTATACCAAGAC 60.449 44.000 0.00 0.00 0.00 3.01
5544 8829 4.638421 CCAAGCCATCGTTTTATACCAAGA 59.362 41.667 0.00 0.00 0.00 3.02
5545 8830 4.398044 ACCAAGCCATCGTTTTATACCAAG 59.602 41.667 0.00 0.00 0.00 3.61
5546 8831 4.337145 ACCAAGCCATCGTTTTATACCAA 58.663 39.130 0.00 0.00 0.00 3.67
5547 8832 3.958018 ACCAAGCCATCGTTTTATACCA 58.042 40.909 0.00 0.00 0.00 3.25
5548 8833 4.157105 ACAACCAAGCCATCGTTTTATACC 59.843 41.667 0.00 0.00 0.00 2.73
5549 8834 5.123344 AGACAACCAAGCCATCGTTTTATAC 59.877 40.000 0.00 0.00 0.00 1.47
5550 8835 5.250200 AGACAACCAAGCCATCGTTTTATA 58.750 37.500 0.00 0.00 0.00 0.98
5551 8836 4.079253 AGACAACCAAGCCATCGTTTTAT 58.921 39.130 0.00 0.00 0.00 1.40
5552 8837 3.482436 AGACAACCAAGCCATCGTTTTA 58.518 40.909 0.00 0.00 0.00 1.52
5553 8838 2.306847 AGACAACCAAGCCATCGTTTT 58.693 42.857 0.00 0.00 0.00 2.43
5554 8839 1.981256 AGACAACCAAGCCATCGTTT 58.019 45.000 0.00 0.00 0.00 3.60
5555 8840 1.608590 CAAGACAACCAAGCCATCGTT 59.391 47.619 0.00 0.00 0.00 3.85
5556 8841 1.238439 CAAGACAACCAAGCCATCGT 58.762 50.000 0.00 0.00 0.00 3.73
5557 8842 0.523072 CCAAGACAACCAAGCCATCG 59.477 55.000 0.00 0.00 0.00 3.84
5558 8843 1.620822 ACCAAGACAACCAAGCCATC 58.379 50.000 0.00 0.00 0.00 3.51
5559 8844 2.969821 TACCAAGACAACCAAGCCAT 57.030 45.000 0.00 0.00 0.00 4.40
5560 8845 2.969821 ATACCAAGACAACCAAGCCA 57.030 45.000 0.00 0.00 0.00 4.75
5561 8846 5.466819 GTTTTATACCAAGACAACCAAGCC 58.533 41.667 0.00 0.00 0.00 4.35
5562 8847 5.049267 TCGTTTTATACCAAGACAACCAAGC 60.049 40.000 0.00 0.00 0.00 4.01
5563 8848 6.548441 TCGTTTTATACCAAGACAACCAAG 57.452 37.500 0.00 0.00 0.00 3.61
5564 8849 6.072397 CCATCGTTTTATACCAAGACAACCAA 60.072 38.462 0.00 0.00 0.00 3.67
5565 8850 5.413213 CCATCGTTTTATACCAAGACAACCA 59.587 40.000 0.00 0.00 0.00 3.67
5566 8851 5.675323 GCCATCGTTTTATACCAAGACAACC 60.675 44.000 0.00 0.00 0.00 3.77
5567 8852 5.123344 AGCCATCGTTTTATACCAAGACAAC 59.877 40.000 0.00 0.00 0.00 3.32
5568 8853 5.250200 AGCCATCGTTTTATACCAAGACAA 58.750 37.500 0.00 0.00 0.00 3.18
5609 8894 6.093495 GGATCGACATTCCATTACACTTTCAA 59.907 38.462 0.00 0.00 33.21 2.69
5654 8939 2.472695 TTCACCAAATCCCTCTCACG 57.527 50.000 0.00 0.00 0.00 4.35
5656 8941 3.009033 ACGATTTCACCAAATCCCTCTCA 59.991 43.478 0.00 0.00 43.59 3.27
5672 8959 5.376854 AGCTCAAGCAATAACAACGATTT 57.623 34.783 4.59 0.00 45.16 2.17
5676 8965 3.155998 CGAAGCTCAAGCAATAACAACG 58.844 45.455 4.59 0.00 45.16 4.10
5694 8986 7.120716 TGTAGTCCTATATATATGCCCACGAA 58.879 38.462 5.44 0.00 0.00 3.85
5715 9007 7.335422 GCCTTGTATCCCAAATAGATCATGTAG 59.665 40.741 0.00 0.00 31.20 2.74
5732 9025 7.500559 AGGAATTATTCTGACTTGCCTTGTATC 59.499 37.037 4.87 0.00 0.00 2.24
5733 9026 7.349598 AGGAATTATTCTGACTTGCCTTGTAT 58.650 34.615 4.87 0.00 0.00 2.29
5902 9200 1.053835 TCACTCCAGCCACAACTCCA 61.054 55.000 0.00 0.00 0.00 3.86
5980 9281 1.144057 CCACCACCATACGCTCTCC 59.856 63.158 0.00 0.00 0.00 3.71
5990 9291 2.445085 ACCACGACTCCACCACCA 60.445 61.111 0.00 0.00 0.00 4.17
6001 9302 2.520465 TACGGCTACCTCGACCACGA 62.520 60.000 0.00 0.00 46.56 4.35
6020 9321 0.320374 TCGACCACGGCATTCTTCTT 59.680 50.000 0.00 0.00 40.21 2.52
6021 9322 0.537188 ATCGACCACGGCATTCTTCT 59.463 50.000 0.00 0.00 40.21 2.85
6096 9397 3.307906 ACCACTAACTCGGCGCCA 61.308 61.111 28.98 12.94 0.00 5.69
6207 9535 3.387091 TCTACGCATGCCCGGTGT 61.387 61.111 13.15 6.24 0.00 4.16
6437 9768 1.031235 TCGTGTACTCCGACAACCAA 58.969 50.000 4.44 0.00 0.00 3.67
6458 9789 0.477204 TCGAGATCTACCCCGACCAT 59.523 55.000 0.00 0.00 0.00 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.