Multiple sequence alignment - TraesCS1D01G132100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G132100 chr1D 100.000 7989 0 0 1 7989 156013435 156005447 0.000000e+00 14717.0
1 TraesCS1D01G132100 chr1D 99.822 1125 2 0 4471 5595 138256161 138257285 0.000000e+00 2067.0
2 TraesCS1D01G132100 chr1D 97.365 873 19 3 4737 5609 67426364 67425496 0.000000e+00 1482.0
3 TraesCS1D01G132100 chr1D 97.471 870 18 3 4737 5606 72874186 72875051 0.000000e+00 1482.0
4 TraesCS1D01G132100 chr1D 95.078 833 38 2 7160 7989 170574513 170573681 0.000000e+00 1308.0
5 TraesCS1D01G132100 chr1D 94.089 829 45 2 7162 7989 326138521 326137696 0.000000e+00 1256.0
6 TraesCS1D01G132100 chr1D 79.379 1901 282 85 1449 3298 204794987 204793146 0.000000e+00 1238.0
7 TraesCS1D01G132100 chr1D 93.261 831 53 3 7160 7989 306212807 306211979 0.000000e+00 1221.0
8 TraesCS1D01G132100 chr1D 77.516 1908 267 81 1451 3298 458349997 458348192 0.000000e+00 998.0
9 TraesCS1D01G132100 chr1D 99.187 492 3 1 3970 4460 138256424 138256915 0.000000e+00 885.0
10 TraesCS1D01G132100 chr1D 99.387 489 2 1 3973 4460 156008699 156008211 0.000000e+00 885.0
11 TraesCS1D01G132100 chr1D 97.600 500 8 3 3961 4460 67426373 67425878 0.000000e+00 854.0
12 TraesCS1D01G132100 chr1D 79.209 1289 193 47 2039 3298 453301997 453303239 0.000000e+00 826.0
13 TraesCS1D01G132100 chr1D 86.816 713 66 13 2127 2837 486141719 486142405 0.000000e+00 771.0
14 TraesCS1D01G132100 chr1D 88.376 628 58 10 1447 2063 107651627 107652250 0.000000e+00 741.0
15 TraesCS1D01G132100 chr1D 94.409 465 26 0 1 465 306213272 306212808 0.000000e+00 715.0
16 TraesCS1D01G132100 chr1D 94.397 464 26 0 2 465 343198412 343198875 0.000000e+00 713.0
17 TraesCS1D01G132100 chr1D 94.194 465 27 0 1 465 397160346 397159882 0.000000e+00 710.0
18 TraesCS1D01G132100 chr1D 86.613 620 69 10 1447 2063 414397284 414397892 0.000000e+00 673.0
19 TraesCS1D01G132100 chr1D 84.770 499 48 17 2809 3298 486142344 486142823 7.250000e-130 475.0
20 TraesCS1D01G132100 chr1D 86.234 385 39 8 2917 3298 433906200 433905827 9.650000e-109 405.0
21 TraesCS1D01G132100 chr1D 93.305 239 14 1 4500 4736 158781638 158781400 1.280000e-92 351.0
22 TraesCS1D01G132100 chr1D 87.826 115 10 4 4471 4583 476064723 476064611 1.810000e-26 132.0
23 TraesCS1D01G132100 chr1D 83.333 144 16 5 3788 3925 403278996 403278855 8.420000e-25 126.0
24 TraesCS1D01G132100 chr1D 98.214 56 1 0 743 798 403280611 403280556 1.830000e-16 99.0
25 TraesCS1D01G132100 chr2D 89.650 1884 129 31 1451 3304 400489626 400487779 0.000000e+00 2338.0
26 TraesCS1D01G132100 chr2D 99.911 1125 1 0 4471 5595 314790824 314791948 0.000000e+00 2073.0
27 TraesCS1D01G132100 chr2D 89.633 1389 104 17 1451 2819 334150546 334151914 0.000000e+00 1731.0
28 TraesCS1D01G132100 chr2D 87.751 1396 120 30 1445 2812 556411324 556409952 0.000000e+00 1583.0
29 TraesCS1D01G132100 chr2D 93.269 832 52 4 7160 7989 232621206 232620377 0.000000e+00 1223.0
30 TraesCS1D01G132100 chr2D 93.261 831 52 4 7160 7989 339039410 339038583 0.000000e+00 1221.0
31 TraesCS1D01G132100 chr2D 91.019 746 60 6 2559 3303 313460961 313461700 0.000000e+00 1000.0
32 TraesCS1D01G132100 chr2D 99.187 492 3 1 3970 4460 314791087 314791578 0.000000e+00 885.0
33 TraesCS1D01G132100 chr2D 95.269 465 22 0 1 465 141498804 141499268 0.000000e+00 737.0
34 TraesCS1D01G132100 chr2D 94.421 466 25 1 1 465 331625157 331625622 0.000000e+00 715.0
35 TraesCS1D01G132100 chr2D 82.073 357 41 16 455 798 574660713 574660367 4.720000e-72 283.0
36 TraesCS1D01G132100 chr2D 96.040 101 3 1 4471 4571 589328716 589328815 6.410000e-36 163.0
37 TraesCS1D01G132100 chr2D 92.647 68 5 0 5697 5764 106235741 106235674 1.830000e-16 99.0
38 TraesCS1D01G132100 chr2D 100.000 28 0 0 462 489 577119917 577119944 1.400000e-02 52.8
39 TraesCS1D01G132100 chr5D 89.530 1853 130 27 1451 3298 218029609 218031402 0.000000e+00 2289.0
40 TraesCS1D01G132100 chr5D 89.400 1717 132 18 1451 3142 485778282 485779973 0.000000e+00 2117.0
41 TraesCS1D01G132100 chr5D 87.114 1878 155 33 1451 3301 119911923 119913740 0.000000e+00 2047.0
42 TraesCS1D01G132100 chr5D 91.368 1425 104 10 1444 2862 440906580 440905169 0.000000e+00 1932.0
43 TraesCS1D01G132100 chr5D 87.655 1369 122 18 1480 2824 480017545 480016200 0.000000e+00 1548.0
44 TraesCS1D01G132100 chr5D 98.142 861 15 1 4736 5596 247277746 247278605 0.000000e+00 1500.0
45 TraesCS1D01G132100 chr5D 98.142 861 15 1 4736 5596 247302652 247303511 0.000000e+00 1500.0
46 TraesCS1D01G132100 chr5D 97.232 867 21 3 4734 5599 314196214 314195350 0.000000e+00 1465.0
47 TraesCS1D01G132100 chr5D 86.453 1277 100 24 2043 3298 81316903 81318127 0.000000e+00 1332.0
48 TraesCS1D01G132100 chr5D 86.328 1258 128 17 2042 3294 10519336 10518118 0.000000e+00 1330.0
49 TraesCS1D01G132100 chr5D 93.622 831 52 1 7160 7989 211322304 211321474 0.000000e+00 1240.0
50 TraesCS1D01G132100 chr5D 87.942 821 70 15 2017 2835 199076357 199077150 0.000000e+00 941.0
51 TraesCS1D01G132100 chr5D 86.839 851 72 16 2450 3298 8803693 8802881 0.000000e+00 915.0
52 TraesCS1D01G132100 chr5D 97.546 489 11 1 3972 4460 128657470 128656983 0.000000e+00 835.0
53 TraesCS1D01G132100 chr5D 94.624 465 24 1 1 465 283546212 283545749 0.000000e+00 719.0
54 TraesCS1D01G132100 chr5D 88.591 596 60 6 1445 2037 81316334 81316924 0.000000e+00 717.0
55 TraesCS1D01G132100 chr5D 94.409 465 26 0 1 465 265031200 265030736 0.000000e+00 715.0
56 TraesCS1D01G132100 chr5D 94.206 466 26 1 1 465 360733101 360733566 0.000000e+00 710.0
57 TraesCS1D01G132100 chr5D 90.605 479 26 6 6047 6506 556285567 556285089 1.140000e-172 617.0
58 TraesCS1D01G132100 chr5D 92.806 417 29 1 6090 6506 79990123 79990538 3.190000e-168 603.0
59 TraesCS1D01G132100 chr5D 88.347 472 39 12 2835 3298 291899004 291899467 3.260000e-153 553.0
60 TraesCS1D01G132100 chr5D 93.605 172 10 1 4566 4736 449356280 449356451 1.030000e-63 255.0
61 TraesCS1D01G132100 chr5D 90.551 127 5 5 4471 4596 286266071 286266191 2.310000e-35 161.0
62 TraesCS1D01G132100 chr5D 94.521 73 4 0 6614 6686 419906253 419906181 6.550000e-21 113.0
63 TraesCS1D01G132100 chr5D 94.521 73 4 0 6614 6686 434298354 434298426 6.550000e-21 113.0
64 TraesCS1D01G132100 chr5D 92.647 68 5 0 5697 5764 384074318 384074385 1.830000e-16 99.0
65 TraesCS1D01G132100 chr5D 91.176 68 6 0 5697 5764 297792196 297792129 8.540000e-15 93.5
66 TraesCS1D01G132100 chr5D 85.333 75 8 2 731 804 445869295 445869367 3.090000e-09 75.0
67 TraesCS1D01G132100 chr3A 88.854 1893 157 21 1448 3304 22042140 22044014 0.000000e+00 2278.0
68 TraesCS1D01G132100 chr3A 88.128 1870 183 21 1451 3299 568157264 568155413 0.000000e+00 2187.0
69 TraesCS1D01G132100 chr3A 80.172 116 17 6 686 798 716910937 716910825 1.850000e-11 82.4
70 TraesCS1D01G132100 chr7A 88.794 1874 175 15 1451 3298 581014013 581015877 0.000000e+00 2265.0
71 TraesCS1D01G132100 chr7A 88.927 1445 128 17 1451 2876 549559616 549561047 0.000000e+00 1753.0
72 TraesCS1D01G132100 chr7A 93.797 403 25 0 6090 6492 397427037 397426635 2.470000e-169 606.0
73 TraesCS1D01G132100 chr7A 91.279 172 14 1 4566 4736 276906485 276906314 4.820000e-57 233.0
74 TraesCS1D01G132100 chr7A 83.893 149 15 4 981 1122 736552335 736552189 5.030000e-27 134.0
75 TraesCS1D01G132100 chr4D 87.901 1901 151 21 1449 3298 509423944 509422072 0.000000e+00 2163.0
76 TraesCS1D01G132100 chr4D 93.397 833 51 3 7160 7989 314451060 314451891 0.000000e+00 1230.0
77 TraesCS1D01G132100 chr4D 87.642 793 67 10 2050 2824 53497580 53498359 0.000000e+00 893.0
78 TraesCS1D01G132100 chr4D 81.228 1140 137 28 1747 2837 23220167 23219056 0.000000e+00 848.0
79 TraesCS1D01G132100 chr4D 95.269 465 22 0 1 465 89938299 89938763 0.000000e+00 737.0
80 TraesCS1D01G132100 chr4D 94.194 465 27 0 1 465 297670338 297670802 0.000000e+00 710.0
81 TraesCS1D01G132100 chr4D 94.168 463 27 0 3 465 152841936 152841474 0.000000e+00 706.0
82 TraesCS1D01G132100 chr4D 94.004 467 26 1 1 465 322054876 322055342 0.000000e+00 706.0
83 TraesCS1D01G132100 chr4D 93.978 465 28 0 1 465 93862953 93862489 0.000000e+00 704.0
84 TraesCS1D01G132100 chr4D 93.978 465 27 1 1 465 248241225 248241688 0.000000e+00 702.0
85 TraesCS1D01G132100 chr4D 93.978 465 26 2 1 465 248248438 248248900 0.000000e+00 702.0
86 TraesCS1D01G132100 chr4D 93.763 465 29 0 1 465 235266911 235266447 0.000000e+00 699.0
87 TraesCS1D01G132100 chr4D 93.763 465 29 0 1 465 370011524 370011060 0.000000e+00 699.0
88 TraesCS1D01G132100 chr4D 74.892 1625 292 81 1724 3298 384676186 384677744 1.130000e-177 634.0
89 TraesCS1D01G132100 chr4D 89.770 479 30 6 6047 6506 347173434 347172956 5.340000e-166 595.0
90 TraesCS1D01G132100 chr4D 85.606 396 41 4 2904 3298 53498630 53499010 1.250000e-107 401.0
91 TraesCS1D01G132100 chr4D 83.914 373 52 8 2931 3298 461799062 461798693 4.590000e-92 350.0
92 TraesCS1D01G132100 chr4D 83.777 376 50 10 2931 3298 431394332 431394704 5.930000e-91 346.0
93 TraesCS1D01G132100 chr4D 95.858 169 6 1 4566 4734 26617991 26618158 1.020000e-68 272.0
94 TraesCS1D01G132100 chr4D 95.322 171 8 0 4566 4736 26625928 26626098 1.020000e-68 272.0
95 TraesCS1D01G132100 chr2A 87.420 1868 196 25 1449 3298 118394202 118396048 0.000000e+00 2111.0
96 TraesCS1D01G132100 chr4A 86.593 1902 193 21 1451 3307 576049921 576048037 0.000000e+00 2043.0
97 TraesCS1D01G132100 chr4A 95.238 42 2 0 1081 1122 422761944 422761903 5.170000e-07 67.6
98 TraesCS1D01G132100 chr3D 86.568 1824 166 28 1506 3298 375701655 375703430 0.000000e+00 1938.0
99 TraesCS1D01G132100 chr3D 97.685 864 17 3 4734 5597 67921706 67922566 0.000000e+00 1482.0
100 TraesCS1D01G132100 chr3D 97.229 866 20 4 4736 5601 65491039 65491900 0.000000e+00 1463.0
101 TraesCS1D01G132100 chr3D 91.581 1069 75 11 2234 3298 613814997 613813940 0.000000e+00 1461.0
102 TraesCS1D01G132100 chr3D 93.141 831 55 2 7160 7989 448713458 448712629 0.000000e+00 1218.0
103 TraesCS1D01G132100 chr3D 94.840 562 28 1 2291 2851 22293347 22293908 0.000000e+00 876.0
104 TraesCS1D01G132100 chr3D 96.414 502 16 2 3959 4460 65491027 65491526 0.000000e+00 826.0
105 TraesCS1D01G132100 chr3D 91.554 592 35 9 1451 2037 22292467 22293048 0.000000e+00 802.0
106 TraesCS1D01G132100 chr3D 95.054 465 23 0 1 465 57126403 57125939 0.000000e+00 732.0
107 TraesCS1D01G132100 chr3D 89.463 484 30 8 6043 6506 584380557 584380075 6.900000e-165 592.0
108 TraesCS1D01G132100 chr3D 87.992 483 43 12 2827 3298 551389635 551390113 2.520000e-154 556.0
109 TraesCS1D01G132100 chr3D 93.909 197 11 1 2042 2238 22293026 22293221 6.060000e-76 296.0
110 TraesCS1D01G132100 chr3D 90.083 121 10 2 4471 4590 159670820 159670701 1.070000e-33 156.0
111 TraesCS1D01G132100 chr3D 92.647 68 5 0 5697 5764 70730227 70730294 1.830000e-16 99.0
112 TraesCS1D01G132100 chr3D 92.647 68 5 0 5697 5764 443946191 443946258 1.830000e-16 99.0
113 TraesCS1D01G132100 chr3D 81.739 115 17 4 686 798 546268246 546268134 8.540000e-15 93.5
114 TraesCS1D01G132100 chr1A 89.323 1433 124 19 1451 2866 559781065 559782485 0.000000e+00 1772.0
115 TraesCS1D01G132100 chr1A 87.753 1135 108 13 1449 2573 212026469 212027582 0.000000e+00 1297.0
116 TraesCS1D01G132100 chr1A 81.034 116 16 6 686 798 536679980 536680092 3.970000e-13 87.9
117 TraesCS1D01G132100 chr6D 89.225 1290 88 15 2015 3298 226018964 226017720 0.000000e+00 1565.0
118 TraesCS1D01G132100 chr6D 93.502 831 51 3 7160 7989 310360630 310359802 0.000000e+00 1232.0
119 TraesCS1D01G132100 chr6D 78.193 1926 292 83 1449 3298 396461546 396463419 0.000000e+00 1112.0
120 TraesCS1D01G132100 chr6D 81.771 1355 182 45 1445 2764 346560011 346561335 0.000000e+00 1074.0
121 TraesCS1D01G132100 chr6D 84.866 859 98 16 1451 2284 347766664 347765813 0.000000e+00 837.0
122 TraesCS1D01G132100 chr6D 96.982 497 14 1 3965 4460 39364898 39365394 0.000000e+00 833.0
123 TraesCS1D01G132100 chr6D 96.614 502 14 3 3961 4460 212109818 212109318 0.000000e+00 830.0
124 TraesCS1D01G132100 chr6D 75.650 1655 281 81 1724 3298 7660483 7658871 0.000000e+00 712.0
125 TraesCS1D01G132100 chr6D 88.455 589 55 9 1451 2038 97245899 97246475 0.000000e+00 699.0
126 TraesCS1D01G132100 chr6D 93.750 464 28 1 1 463 358551703 358552166 0.000000e+00 695.0
127 TraesCS1D01G132100 chr6D 93.548 465 29 1 1 465 297129565 297129102 0.000000e+00 691.0
128 TraesCS1D01G132100 chr6D 93.290 462 31 0 4 465 146117267 146116806 0.000000e+00 682.0
129 TraesCS1D01G132100 chr6D 93.133 466 30 2 1 465 192725359 192725823 0.000000e+00 682.0
130 TraesCS1D01G132100 chr6D 93.118 465 32 0 1 465 357937434 357937898 0.000000e+00 682.0
131 TraesCS1D01G132100 chr6D 93.261 460 31 0 1 460 87453411 87452952 0.000000e+00 678.0
132 TraesCS1D01G132100 chr6D 92.903 465 33 0 1 465 271869865 271870329 0.000000e+00 676.0
133 TraesCS1D01G132100 chr6D 92.903 465 33 0 1 465 417676482 417676018 0.000000e+00 676.0
134 TraesCS1D01G132100 chr6D 92.903 465 32 1 1 465 350388028 350388491 0.000000e+00 675.0
135 TraesCS1D01G132100 chr6D 86.731 618 69 7 1451 2064 427755133 427754525 0.000000e+00 675.0
136 TraesCS1D01G132100 chr6D 92.437 476 28 6 1447 1916 80474144 80473671 0.000000e+00 673.0
137 TraesCS1D01G132100 chr6D 86.252 611 74 6 1451 2057 427756806 427756202 0.000000e+00 654.0
138 TraesCS1D01G132100 chr6D 80.021 931 132 34 2383 3306 291391959 291391076 2.430000e-179 640.0
139 TraesCS1D01G132100 chr6D 85.434 611 78 8 1451 2057 427758322 427757719 6.810000e-175 625.0
140 TraesCS1D01G132100 chr6D 78.325 1015 162 28 1721 2710 27467613 27466632 3.190000e-168 603.0
141 TraesCS1D01G132100 chr6D 84.304 618 73 15 1449 2063 342074362 342073766 4.160000e-162 582.0
142 TraesCS1D01G132100 chr6D 83.065 620 92 11 1449 2063 107953828 107954439 1.170000e-152 551.0
143 TraesCS1D01G132100 chr6D 76.893 1030 188 42 2127 3136 50608854 50609853 9.120000e-149 538.0
144 TraesCS1D01G132100 chr6D 77.743 966 151 46 2363 3298 438097813 438098744 1.180000e-147 534.0
145 TraesCS1D01G132100 chr6D 78.492 902 126 43 2421 3298 126843897 126843040 5.490000e-146 529.0
146 TraesCS1D01G132100 chr6D 80.884 701 100 20 2127 2821 355867917 355868589 9.190000e-144 521.0
147 TraesCS1D01G132100 chr6D 78.686 624 110 16 2150 2764 107976304 107976913 2.090000e-105 394.0
148 TraesCS1D01G132100 chr6D 84.110 365 46 9 2941 3298 431278614 431278255 7.680000e-90 342.0
149 TraesCS1D01G132100 chr6D 84.884 344 42 10 2959 3298 346561530 346561867 9.930000e-89 339.0
150 TraesCS1D01G132100 chr6D 84.507 355 41 13 2953 3298 446862367 446862716 9.930000e-89 339.0
151 TraesCS1D01G132100 chr6D 80.220 455 79 10 2321 2771 314623898 314624345 1.660000e-86 331.0
152 TraesCS1D01G132100 chr6D 82.597 362 57 5 2464 2821 315994189 315993830 1.670000e-81 315.0
153 TraesCS1D01G132100 chr6D 84.568 324 43 6 2980 3298 367290442 367290763 1.670000e-81 315.0
154 TraesCS1D01G132100 chr6D 82.058 379 47 16 2931 3298 351984734 351985102 3.620000e-78 303.0
155 TraesCS1D01G132100 chr6D 96.933 163 5 0 4574 4736 434965886 434966048 2.840000e-69 274.0
156 TraesCS1D01G132100 chr7D 98.050 872 15 2 4725 5595 56834732 56835602 0.000000e+00 1515.0
157 TraesCS1D01G132100 chr7D 93.373 830 51 3 7161 7989 271559723 271558897 0.000000e+00 1225.0
158 TraesCS1D01G132100 chr7D 98.377 493 6 2 3970 4460 56834741 56835233 0.000000e+00 865.0
159 TraesCS1D01G132100 chr7D 86.667 690 77 11 1449 2132 220294706 220295386 0.000000e+00 750.0
160 TraesCS1D01G132100 chr7D 91.042 480 23 7 6047 6506 577331328 577330849 1.460000e-176 630.0
161 TraesCS1D01G132100 chr7D 89.876 484 28 8 6043 6506 65765695 65765213 3.190000e-168 603.0
162 TraesCS1D01G132100 chr7D 89.463 484 30 8 6043 6506 435181297 435181779 6.900000e-165 592.0
163 TraesCS1D01G132100 chr7D 89.098 266 7 3 4471 4736 211655294 211655051 2.160000e-80 311.0
164 TraesCS1D01G132100 chr7D 89.113 248 5 5 4490 4736 211647009 211646783 1.010000e-73 289.0
165 TraesCS1D01G132100 chr7D 86.555 238 12 5 6289 6506 609065083 609064846 2.230000e-60 244.0
166 TraesCS1D01G132100 chr7D 90.265 113 8 3 4471 4581 533652444 533652555 2.320000e-30 145.0
167 TraesCS1D01G132100 chr7D 95.890 73 3 0 6614 6686 609064838 609064766 1.410000e-22 119.0
168 TraesCS1D01G132100 chr7D 81.507 146 18 4 981 1119 631811231 631811374 2.360000e-20 111.0
169 TraesCS1D01G132100 chr7D 92.308 78 4 2 6610 6686 65765208 65765132 8.480000e-20 110.0
170 TraesCS1D01G132100 chr7D 92.308 78 4 2 6610 6686 435181784 435181860 8.480000e-20 110.0
171 TraesCS1D01G132100 chr7D 92.647 68 5 0 5697 5764 37276430 37276497 1.830000e-16 99.0
172 TraesCS1D01G132100 chr6A 85.961 1218 132 13 1578 2772 387212076 387210875 0.000000e+00 1266.0
173 TraesCS1D01G132100 chr6A 88.641 898 83 10 2046 2938 615475880 615474997 0.000000e+00 1075.0
174 TraesCS1D01G132100 chr6A 89.396 745 64 8 1447 2185 578531651 578532386 0.000000e+00 924.0
175 TraesCS1D01G132100 chr6A 86.402 478 54 10 2827 3298 578532382 578532854 5.530000e-141 512.0
176 TraesCS1D01G132100 chr6A 94.152 171 9 1 4566 4736 237194180 237194349 7.950000e-65 259.0
177 TraesCS1D01G132100 chr6A 81.667 120 12 6 5697 5814 47673059 47672948 3.070000e-14 91.6
178 TraesCS1D01G132100 chr6A 81.481 108 14 6 694 798 545340893 545340789 5.140000e-12 84.2
179 TraesCS1D01G132100 chr5A 89.227 919 67 15 6264 7161 33900878 33901785 0.000000e+00 1120.0
180 TraesCS1D01G132100 chr5A 87.462 981 78 21 461 1440 33887581 33888517 0.000000e+00 1088.0
181 TraesCS1D01G132100 chr5A 93.151 584 19 3 5682 6263 33895127 33895691 0.000000e+00 837.0
182 TraesCS1D01G132100 chr5A 87.302 693 39 17 3301 3972 33894473 33895137 0.000000e+00 747.0
183 TraesCS1D01G132100 chr5A 92.650 517 33 4 939 1452 33893952 33894466 0.000000e+00 739.0
184 TraesCS1D01G132100 chr5A 84.114 491 45 10 461 945 33893015 33893478 2.050000e-120 444.0
185 TraesCS1D01G132100 chr5A 85.870 92 12 1 714 804 435002883 435002792 6.600000e-16 97.1
186 TraesCS1D01G132100 chr5A 81.739 115 17 4 686 798 268046054 268045942 8.540000e-15 93.5
187 TraesCS1D01G132100 chr5B 94.624 465 25 0 1 465 321790490 321790026 0.000000e+00 721.0
188 TraesCS1D01G132100 chr5B 81.667 120 12 6 5697 5814 197195109 197194998 3.070000e-14 91.6
189 TraesCS1D01G132100 chr5B 81.667 120 12 6 5697 5814 246275953 246275842 3.070000e-14 91.6
190 TraesCS1D01G132100 chr1B 94.409 465 26 0 1 465 346718142 346718606 0.000000e+00 715.0
191 TraesCS1D01G132100 chr1B 92.647 68 5 0 5697 5764 424526465 424526532 1.830000e-16 99.0
192 TraesCS1D01G132100 chr1B 81.667 120 12 6 5697 5814 519438230 519438119 3.070000e-14 91.6
193 TraesCS1D01G132100 chr1B 80.172 116 17 6 686 798 576225471 576225583 1.850000e-11 82.4
194 TraesCS1D01G132100 chr1B 87.143 70 7 2 731 799 36923282 36923350 2.390000e-10 78.7
195 TraesCS1D01G132100 chr3B 90.909 418 37 1 6090 6506 290617108 290617525 1.950000e-155 560.0
196 TraesCS1D01G132100 chr3B 86.498 237 13 3 6289 6506 16179423 16179187 8.010000e-60 243.0
197 TraesCS1D01G132100 chr3B 95.890 73 3 0 6614 6686 16179179 16179107 1.410000e-22 119.0
198 TraesCS1D01G132100 chr3B 95.890 73 3 0 6614 6686 240760151 240760079 1.410000e-22 119.0
199 TraesCS1D01G132100 chr3B 94.521 73 4 0 6614 6686 280586490 280586562 6.550000e-21 113.0
200 TraesCS1D01G132100 chr3B 86.250 80 9 2 718 796 801077290 801077212 1.430000e-12 86.1
201 TraesCS1D01G132100 chr7B 86.920 237 12 3 6289 6506 709130046 709130282 1.720000e-61 248.0
202 TraesCS1D01G132100 chr7B 86.498 237 13 3 6289 6506 616913890 616914126 8.010000e-60 243.0
203 TraesCS1D01G132100 chr7B 86.441 118 14 2 1003 1119 743383222 743383338 2.340000e-25 128.0
204 TraesCS1D01G132100 chr7B 95.890 73 3 0 6614 6686 613374028 613373956 1.410000e-22 119.0
205 TraesCS1D01G132100 chr4B 86.498 237 13 4 6289 6506 548861566 548861330 8.010000e-60 243.0
206 TraesCS1D01G132100 chr4B 84.783 138 14 4 3788 3919 184600539 184600675 1.810000e-26 132.0
207 TraesCS1D01G132100 chr4B 92.157 51 4 0 5934 5984 655327939 655327889 1.110000e-08 73.1
208 TraesCS1D01G132100 chr2B 86.498 237 13 3 6289 6506 29004747 29004511 8.010000e-60 243.0
209 TraesCS1D01G132100 chr2B 80.342 117 15 8 686 798 576568479 576568591 1.850000e-11 82.4
210 TraesCS1D01G132100 chr2B 100.000 28 0 0 462 489 766559277 766559304 1.400000e-02 52.8
211 TraesCS1D01G132100 chr6B 81.034 116 16 6 686 798 48062854 48062966 3.970000e-13 87.9
212 TraesCS1D01G132100 chr6B 81.250 112 15 6 690 798 48054467 48054575 1.430000e-12 86.1
213 TraesCS1D01G132100 chr6B 90.000 60 3 2 746 804 218975100 218975043 3.090000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G132100 chr1D 156005447 156013435 7988 True 14717.000000 14717 100.000000 1 7989 1 chr1D.!!$R1 7988
1 TraesCS1D01G132100 chr1D 72874186 72875051 865 False 1482.000000 1482 97.471000 4737 5606 1 chr1D.!!$F1 869
2 TraesCS1D01G132100 chr1D 138256161 138257285 1124 False 1476.000000 2067 99.504500 3970 5595 2 chr1D.!!$F6 1625
3 TraesCS1D01G132100 chr1D 170573681 170574513 832 True 1308.000000 1308 95.078000 7160 7989 1 chr1D.!!$R4 829
4 TraesCS1D01G132100 chr1D 326137696 326138521 825 True 1256.000000 1256 94.089000 7162 7989 1 chr1D.!!$R6 827
5 TraesCS1D01G132100 chr1D 204793146 204794987 1841 True 1238.000000 1238 79.379000 1449 3298 1 chr1D.!!$R5 1849
6 TraesCS1D01G132100 chr1D 67425496 67426373 877 True 1168.000000 1482 97.482500 3961 5609 2 chr1D.!!$R11 1648
7 TraesCS1D01G132100 chr1D 458348192 458349997 1805 True 998.000000 998 77.516000 1451 3298 1 chr1D.!!$R9 1847
8 TraesCS1D01G132100 chr1D 306211979 306213272 1293 True 968.000000 1221 93.835000 1 7989 2 chr1D.!!$R12 7988
9 TraesCS1D01G132100 chr1D 453301997 453303239 1242 False 826.000000 826 79.209000 2039 3298 1 chr1D.!!$F5 1259
10 TraesCS1D01G132100 chr1D 107651627 107652250 623 False 741.000000 741 88.376000 1447 2063 1 chr1D.!!$F2 616
11 TraesCS1D01G132100 chr1D 414397284 414397892 608 False 673.000000 673 86.613000 1447 2063 1 chr1D.!!$F4 616
12 TraesCS1D01G132100 chr1D 486141719 486142823 1104 False 623.000000 771 85.793000 2127 3298 2 chr1D.!!$F7 1171
13 TraesCS1D01G132100 chr2D 400487779 400489626 1847 True 2338.000000 2338 89.650000 1451 3304 1 chr2D.!!$R4 1853
14 TraesCS1D01G132100 chr2D 334150546 334151914 1368 False 1731.000000 1731 89.633000 1451 2819 1 chr2D.!!$F4 1368
15 TraesCS1D01G132100 chr2D 556409952 556411324 1372 True 1583.000000 1583 87.751000 1445 2812 1 chr2D.!!$R5 1367
16 TraesCS1D01G132100 chr2D 314790824 314791948 1124 False 1479.000000 2073 99.549000 3970 5595 2 chr2D.!!$F7 1625
17 TraesCS1D01G132100 chr2D 232620377 232621206 829 True 1223.000000 1223 93.269000 7160 7989 1 chr2D.!!$R2 829
18 TraesCS1D01G132100 chr2D 339038583 339039410 827 True 1221.000000 1221 93.261000 7160 7989 1 chr2D.!!$R3 829
19 TraesCS1D01G132100 chr2D 313460961 313461700 739 False 1000.000000 1000 91.019000 2559 3303 1 chr2D.!!$F2 744
20 TraesCS1D01G132100 chr5D 218029609 218031402 1793 False 2289.000000 2289 89.530000 1451 3298 1 chr5D.!!$F4 1847
21 TraesCS1D01G132100 chr5D 485778282 485779973 1691 False 2117.000000 2117 89.400000 1451 3142 1 chr5D.!!$F14 1691
22 TraesCS1D01G132100 chr5D 119911923 119913740 1817 False 2047.000000 2047 87.114000 1451 3301 1 chr5D.!!$F2 1850
23 TraesCS1D01G132100 chr5D 440905169 440906580 1411 True 1932.000000 1932 91.368000 1444 2862 1 chr5D.!!$R10 1418
24 TraesCS1D01G132100 chr5D 480016200 480017545 1345 True 1548.000000 1548 87.655000 1480 2824 1 chr5D.!!$R11 1344
25 TraesCS1D01G132100 chr5D 247277746 247278605 859 False 1500.000000 1500 98.142000 4736 5596 1 chr5D.!!$F5 860
26 TraesCS1D01G132100 chr5D 247302652 247303511 859 False 1500.000000 1500 98.142000 4736 5596 1 chr5D.!!$F6 860
27 TraesCS1D01G132100 chr5D 314195350 314196214 864 True 1465.000000 1465 97.232000 4734 5599 1 chr5D.!!$R8 865
28 TraesCS1D01G132100 chr5D 10518118 10519336 1218 True 1330.000000 1330 86.328000 2042 3294 1 chr5D.!!$R2 1252
29 TraesCS1D01G132100 chr5D 211321474 211322304 830 True 1240.000000 1240 93.622000 7160 7989 1 chr5D.!!$R4 829
30 TraesCS1D01G132100 chr5D 81316334 81318127 1793 False 1024.500000 1332 87.522000 1445 3298 2 chr5D.!!$F15 1853
31 TraesCS1D01G132100 chr5D 199076357 199077150 793 False 941.000000 941 87.942000 2017 2835 1 chr5D.!!$F3 818
32 TraesCS1D01G132100 chr5D 8802881 8803693 812 True 915.000000 915 86.839000 2450 3298 1 chr5D.!!$R1 848
33 TraesCS1D01G132100 chr3A 22042140 22044014 1874 False 2278.000000 2278 88.854000 1448 3304 1 chr3A.!!$F1 1856
34 TraesCS1D01G132100 chr3A 568155413 568157264 1851 True 2187.000000 2187 88.128000 1451 3299 1 chr3A.!!$R1 1848
35 TraesCS1D01G132100 chr7A 581014013 581015877 1864 False 2265.000000 2265 88.794000 1451 3298 1 chr7A.!!$F2 1847
36 TraesCS1D01G132100 chr7A 549559616 549561047 1431 False 1753.000000 1753 88.927000 1451 2876 1 chr7A.!!$F1 1425
37 TraesCS1D01G132100 chr4D 509422072 509423944 1872 True 2163.000000 2163 87.901000 1449 3298 1 chr4D.!!$R8 1849
38 TraesCS1D01G132100 chr4D 314451060 314451891 831 False 1230.000000 1230 93.397000 7160 7989 1 chr4D.!!$F7 829
39 TraesCS1D01G132100 chr4D 23219056 23220167 1111 True 848.000000 848 81.228000 1747 2837 1 chr4D.!!$R1 1090
40 TraesCS1D01G132100 chr4D 53497580 53499010 1430 False 647.000000 893 86.624000 2050 3298 2 chr4D.!!$F11 1248
41 TraesCS1D01G132100 chr4D 384676186 384677744 1558 False 634.000000 634 74.892000 1724 3298 1 chr4D.!!$F9 1574
42 TraesCS1D01G132100 chr2A 118394202 118396048 1846 False 2111.000000 2111 87.420000 1449 3298 1 chr2A.!!$F1 1849
43 TraesCS1D01G132100 chr4A 576048037 576049921 1884 True 2043.000000 2043 86.593000 1451 3307 1 chr4A.!!$R2 1856
44 TraesCS1D01G132100 chr3D 375701655 375703430 1775 False 1938.000000 1938 86.568000 1506 3298 1 chr3D.!!$F3 1792
45 TraesCS1D01G132100 chr3D 67921706 67922566 860 False 1482.000000 1482 97.685000 4734 5597 1 chr3D.!!$F1 863
46 TraesCS1D01G132100 chr3D 613813940 613814997 1057 True 1461.000000 1461 91.581000 2234 3298 1 chr3D.!!$R6 1064
47 TraesCS1D01G132100 chr3D 448712629 448713458 829 True 1218.000000 1218 93.141000 7160 7989 1 chr3D.!!$R3 829
48 TraesCS1D01G132100 chr3D 65491027 65491900 873 False 1144.500000 1463 96.821500 3959 5601 2 chr3D.!!$F7 1642
49 TraesCS1D01G132100 chr3D 22292467 22293908 1441 False 658.000000 876 93.434333 1451 2851 3 chr3D.!!$F6 1400
50 TraesCS1D01G132100 chr1A 559781065 559782485 1420 False 1772.000000 1772 89.323000 1451 2866 1 chr1A.!!$F3 1415
51 TraesCS1D01G132100 chr1A 212026469 212027582 1113 False 1297.000000 1297 87.753000 1449 2573 1 chr1A.!!$F1 1124
52 TraesCS1D01G132100 chr6D 226017720 226018964 1244 True 1565.000000 1565 89.225000 2015 3298 1 chr6D.!!$R8 1283
53 TraesCS1D01G132100 chr6D 310359802 310360630 828 True 1232.000000 1232 93.502000 7160 7989 1 chr6D.!!$R11 829
54 TraesCS1D01G132100 chr6D 396461546 396463419 1873 False 1112.000000 1112 78.193000 1449 3298 1 chr6D.!!$F15 1849
55 TraesCS1D01G132100 chr6D 347765813 347766664 851 True 837.000000 837 84.866000 1451 2284 1 chr6D.!!$R14 833
56 TraesCS1D01G132100 chr6D 212109318 212109818 500 True 830.000000 830 96.614000 3961 4460 1 chr6D.!!$R7 499
57 TraesCS1D01G132100 chr6D 7658871 7660483 1612 True 712.000000 712 75.650000 1724 3298 1 chr6D.!!$R1 1574
58 TraesCS1D01G132100 chr6D 346560011 346561867 1856 False 706.500000 1074 83.327500 1445 3298 2 chr6D.!!$F19 1853
59 TraesCS1D01G132100 chr6D 97245899 97246475 576 False 699.000000 699 88.455000 1451 2038 1 chr6D.!!$F3 587
60 TraesCS1D01G132100 chr6D 427754525 427758322 3797 True 651.333333 675 86.139000 1451 2064 3 chr6D.!!$R17 613
61 TraesCS1D01G132100 chr6D 291391076 291391959 883 True 640.000000 640 80.021000 2383 3306 1 chr6D.!!$R9 923
62 TraesCS1D01G132100 chr6D 27466632 27467613 981 True 603.000000 603 78.325000 1721 2710 1 chr6D.!!$R2 989
63 TraesCS1D01G132100 chr6D 342073766 342074362 596 True 582.000000 582 84.304000 1449 2063 1 chr6D.!!$R13 614
64 TraesCS1D01G132100 chr6D 107953828 107954439 611 False 551.000000 551 83.065000 1449 2063 1 chr6D.!!$F4 614
65 TraesCS1D01G132100 chr6D 50608854 50609853 999 False 538.000000 538 76.893000 2127 3136 1 chr6D.!!$F2 1009
66 TraesCS1D01G132100 chr6D 438097813 438098744 931 False 534.000000 534 77.743000 2363 3298 1 chr6D.!!$F17 935
67 TraesCS1D01G132100 chr6D 126843040 126843897 857 True 529.000000 529 78.492000 2421 3298 1 chr6D.!!$R5 877
68 TraesCS1D01G132100 chr6D 355867917 355868589 672 False 521.000000 521 80.884000 2127 2821 1 chr6D.!!$F11 694
69 TraesCS1D01G132100 chr6D 107976304 107976913 609 False 394.000000 394 78.686000 2150 2764 1 chr6D.!!$F5 614
70 TraesCS1D01G132100 chr7D 271558897 271559723 826 True 1225.000000 1225 93.373000 7161 7989 1 chr7D.!!$R3 828
71 TraesCS1D01G132100 chr7D 56834732 56835602 870 False 1190.000000 1515 98.213500 3970 5595 2 chr7D.!!$F5 1625
72 TraesCS1D01G132100 chr7D 220294706 220295386 680 False 750.000000 750 86.667000 1449 2132 1 chr7D.!!$F2 683
73 TraesCS1D01G132100 chr7D 65765132 65765695 563 True 356.500000 603 91.092000 6043 6686 2 chr7D.!!$R5 643
74 TraesCS1D01G132100 chr7D 435181297 435181860 563 False 351.000000 592 90.885500 6043 6686 2 chr7D.!!$F6 643
75 TraesCS1D01G132100 chr6A 387210875 387212076 1201 True 1266.000000 1266 85.961000 1578 2772 1 chr6A.!!$R2 1194
76 TraesCS1D01G132100 chr6A 615474997 615475880 883 True 1075.000000 1075 88.641000 2046 2938 1 chr6A.!!$R4 892
77 TraesCS1D01G132100 chr6A 578531651 578532854 1203 False 718.000000 924 87.899000 1447 3298 2 chr6A.!!$F2 1851
78 TraesCS1D01G132100 chr5A 33900878 33901785 907 False 1120.000000 1120 89.227000 6264 7161 1 chr5A.!!$F2 897
79 TraesCS1D01G132100 chr5A 33887581 33888517 936 False 1088.000000 1088 87.462000 461 1440 1 chr5A.!!$F1 979
80 TraesCS1D01G132100 chr5A 33893015 33895691 2676 False 691.750000 837 89.304250 461 6263 4 chr5A.!!$F3 5802

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
887 889 0.036765 GGCACCGGAGACACACATAA 60.037 55.000 9.46 0.0 0.00 1.90 F
1416 1903 0.322456 CCAGCGAACAAAGATCCCCA 60.322 55.000 0.00 0.0 0.00 4.96 F
1859 5723 1.154282 GTCATCGTCGTCGCTGTCA 60.154 57.895 5.86 0.0 35.19 3.58 F
2215 6282 1.334384 GGAAGAGGAGTGGGAGGAGC 61.334 65.000 0.00 0.0 0.00 4.70 F
4051 8526 0.038801 GAGCTTGCTCAGTTTTGCCC 60.039 55.000 16.71 0.0 0.00 5.36 F
4090 8565 0.035056 CCCTCGAATGCCCTTTGACT 60.035 55.000 0.00 0.0 0.00 3.41 F
4091 8566 1.089920 CCTCGAATGCCCTTTGACTG 58.910 55.000 0.00 0.0 0.00 3.51 F
4219 8694 1.337167 GCATTCAGGACAAAAGCACCC 60.337 52.381 0.00 0.0 0.00 4.61 F
4220 8695 2.242043 CATTCAGGACAAAAGCACCCT 58.758 47.619 0.00 0.0 0.00 4.34 F
5910 11150 2.276732 TGGAGCCTTTCTTGTTCTGG 57.723 50.000 0.00 0.0 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1859 5723 0.103208 GAGGCATCGTTGTCCTCGAT 59.897 55.000 16.12 0.0 46.70 3.59 R
2684 6890 0.736325 GCGTACATGCTGTTCGAGGT 60.736 55.000 15.52 0.0 42.49 3.85 R
3196 7645 1.064060 CCTAGAAGCCCAATTTTCGCG 59.936 52.381 0.00 0.0 0.00 5.87 R
4071 8546 0.035056 AGTCAAAGGGCATTCGAGGG 60.035 55.000 0.00 0.0 0.00 4.30 R
5839 11079 3.072330 TCCATAGAACTTGCTCCACAACA 59.928 43.478 0.00 0.0 33.68 3.33 R
5840 11080 3.674997 TCCATAGAACTTGCTCCACAAC 58.325 45.455 0.00 0.0 33.68 3.32 R
5841 11081 3.869912 GCTCCATAGAACTTGCTCCACAA 60.870 47.826 0.00 0.0 36.62 3.33 R
5888 11128 3.944015 CCAGAACAAGAAAGGCTCCATAG 59.056 47.826 0.00 0.0 0.00 2.23 R
5986 11227 5.650283 AGAAAGAAGAGAGAAGAGAGGGAA 58.350 41.667 0.00 0.0 0.00 3.97 R
7114 12408 0.257616 GGGGAAATCCATCCGACCAA 59.742 55.000 1.22 0.0 40.62 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.794103 TGAAGCTGCTAGAATTGCCAA 58.206 42.857 0.90 0.00 0.00 4.52
61 62 7.282224 CCCGATGAAAAAGATAAACATAGACCA 59.718 37.037 0.00 0.00 0.00 4.02
85 86 0.111061 TTGGCATGCCTGTTGTCTCT 59.889 50.000 35.53 0.00 36.94 3.10
97 98 4.697352 CCTGTTGTCTCTGTCAAAATAGGG 59.303 45.833 0.00 0.00 0.00 3.53
103 104 5.429762 TGTCTCTGTCAAAATAGGGGATCAT 59.570 40.000 0.00 0.00 0.00 2.45
105 106 6.261826 GTCTCTGTCAAAATAGGGGATCATTG 59.738 42.308 0.00 0.00 0.00 2.82
150 151 1.124462 GCTAGCGTGAGTGCTATTCG 58.876 55.000 0.00 0.00 45.79 3.34
155 156 2.157668 AGCGTGAGTGCTATTCGTTTTG 59.842 45.455 0.00 0.00 45.14 2.44
304 305 9.762381 TTGTGTGGGAAAATAAAATATCCTACT 57.238 29.630 8.33 0.00 42.16 2.57
329 330 2.067365 ACTTGTTCTTGGTTCCCCAC 57.933 50.000 0.00 0.00 41.67 4.61
344 345 3.909732 TCCCCACAAGATGACTTTTGTT 58.090 40.909 0.00 0.00 35.46 2.83
373 374 8.617290 TTATCTTTGGTAGACCTTTCTTGAAC 57.383 34.615 0.00 0.00 35.19 3.18
379 380 2.835027 AGACCTTTCTTGAACACCGTC 58.165 47.619 0.00 0.00 0.00 4.79
385 386 1.234821 TCTTGAACACCGTCAATGCC 58.765 50.000 0.00 0.00 36.92 4.40
398 399 5.650266 ACCGTCAATGCCAAAATAGATTGTA 59.350 36.000 0.00 0.00 0.00 2.41
401 402 7.250569 CGTCAATGCCAAAATAGATTGTAAGT 58.749 34.615 0.00 0.00 0.00 2.24
416 417 5.721876 TTGTAAGTAACAAACTGTCGGTG 57.278 39.130 0.00 0.00 45.11 4.94
488 489 2.764572 CCCTCTGTACCGAAATGTAGGT 59.235 50.000 0.00 0.00 44.08 3.08
489 490 3.197116 CCCTCTGTACCGAAATGTAGGTT 59.803 47.826 0.00 0.00 41.63 3.50
509 510 4.756135 GGTTGTTAAAGGATTCCACGTACA 59.244 41.667 5.29 1.42 0.00 2.90
518 519 3.930848 GGATTCCACGTACAAATCTCGTT 59.069 43.478 13.29 0.00 35.62 3.85
591 592 3.005539 GCTGCTCACCTCCCTCCA 61.006 66.667 0.00 0.00 0.00 3.86
600 601 1.772156 CCTCCCTCCAAGATCCCCC 60.772 68.421 0.00 0.00 0.00 5.40
631 632 2.829458 CCTCTCCTCCCCGTCGTC 60.829 72.222 0.00 0.00 0.00 4.20
633 634 3.972971 CTCTCCTCCCCGTCGTCGT 62.973 68.421 0.71 0.00 35.01 4.34
683 685 2.004120 TCGGCCTCTCCTCTCCTCT 61.004 63.158 0.00 0.00 0.00 3.69
688 690 0.465460 CCTCTCCTCTCCTCTCACCG 60.465 65.000 0.00 0.00 0.00 4.94
701 703 1.949847 CTCACCGCGTCTTCTCCCAT 61.950 60.000 4.92 0.00 0.00 4.00
728 730 1.540435 CCAAAAATCCACCACCCGGG 61.540 60.000 22.25 22.25 44.81 5.73
827 829 3.421394 TCTCCCTCTCTCTCTCTCTCT 57.579 52.381 0.00 0.00 0.00 3.10
830 832 3.309296 TCCCTCTCTCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
831 833 3.051803 TCCCTCTCTCTCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
832 834 3.323403 CCCTCTCTCTCTCTCTCTCTCTC 59.677 56.522 0.00 0.00 0.00 3.20
833 835 4.222336 CCTCTCTCTCTCTCTCTCTCTCT 58.778 52.174 0.00 0.00 0.00 3.10
834 836 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
835 837 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
836 838 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
837 839 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
838 840 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
839 841 3.885901 TCTCTCTCTCTCTCTCTCTCTCG 59.114 52.174 0.00 0.00 0.00 4.04
840 842 2.362397 TCTCTCTCTCTCTCTCTCTCGC 59.638 54.545 0.00 0.00 0.00 5.03
841 843 2.363680 CTCTCTCTCTCTCTCTCTCGCT 59.636 54.545 0.00 0.00 0.00 4.93
842 844 2.766263 TCTCTCTCTCTCTCTCTCGCTT 59.234 50.000 0.00 0.00 0.00 4.68
843 845 3.126831 CTCTCTCTCTCTCTCTCGCTTC 58.873 54.545 0.00 0.00 0.00 3.86
844 846 2.499693 TCTCTCTCTCTCTCTCGCTTCA 59.500 50.000 0.00 0.00 0.00 3.02
853 855 2.939756 CTCTCTCGCTTCAGTGCTACTA 59.060 50.000 0.00 0.00 0.00 1.82
860 862 1.246056 TTCAGTGCTACTACGGCGGT 61.246 55.000 13.24 2.37 0.00 5.68
885 887 2.347490 GGCACCGGAGACACACAT 59.653 61.111 9.46 0.00 0.00 3.21
886 888 1.594833 GGCACCGGAGACACACATA 59.405 57.895 9.46 0.00 0.00 2.29
887 889 0.036765 GGCACCGGAGACACACATAA 60.037 55.000 9.46 0.00 0.00 1.90
888 890 1.406887 GGCACCGGAGACACACATAAT 60.407 52.381 9.46 0.00 0.00 1.28
891 893 4.127171 GCACCGGAGACACACATAATAAT 58.873 43.478 9.46 0.00 0.00 1.28
946 1433 3.454573 CCCCACCGTCGGATTCGA 61.455 66.667 20.51 0.00 43.86 3.71
959 1446 1.141053 GGATTCGAAGGCTACCATGGT 59.859 52.381 23.55 23.55 0.00 3.55
1026 1513 4.408821 GGCTCCGATGCCCACACA 62.409 66.667 7.30 0.00 46.82 3.72
1027 1514 2.821366 GCTCCGATGCCCACACAG 60.821 66.667 0.00 0.00 0.00 3.66
1056 1543 3.960313 AGGGGCCAACTCCTCCCT 61.960 66.667 4.39 0.00 44.43 4.20
1057 1544 3.412408 GGGGCCAACTCCTCCCTC 61.412 72.222 4.39 0.00 39.95 4.30
1153 1640 3.220658 TCTCCGGTGCACGTGTCA 61.221 61.111 18.38 12.78 42.24 3.58
1162 1649 2.664851 CACGTGTCACCGGCATGT 60.665 61.111 7.58 0.00 36.62 3.21
1182 1669 3.044305 GCTTCGCCGCTTCACACT 61.044 61.111 0.00 0.00 0.00 3.55
1307 1794 4.612536 CGGCGATGCGAATTGCCC 62.613 66.667 26.57 10.90 46.18 5.36
1319 1806 3.993614 ATTGCCCGCGCCATTCTCA 62.994 57.895 0.00 0.00 0.00 3.27
1349 1836 0.956633 TTAGCTCGTTCACCGTCAGT 59.043 50.000 0.00 0.00 37.94 3.41
1356 1843 3.145422 TTCACCGTCAGTGCGCTCA 62.145 57.895 9.73 0.00 46.81 4.26
1361 1848 1.446792 CGTCAGTGCGCTCAATCCT 60.447 57.895 9.73 0.00 0.00 3.24
1381 1868 1.587043 TACAGCGAACAGAGCGAGCT 61.587 55.000 0.00 0.00 40.04 4.09
1415 1902 0.322546 ACCAGCGAACAAAGATCCCC 60.323 55.000 0.00 0.00 0.00 4.81
1416 1903 0.322456 CCAGCGAACAAAGATCCCCA 60.322 55.000 0.00 0.00 0.00 4.96
1417 1904 1.683011 CCAGCGAACAAAGATCCCCAT 60.683 52.381 0.00 0.00 0.00 4.00
1418 1905 2.094675 CAGCGAACAAAGATCCCCATT 58.905 47.619 0.00 0.00 0.00 3.16
1759 5563 2.435586 ATCCTCGTCGTCGTCGGT 60.436 61.111 11.74 0.00 38.33 4.69
1859 5723 1.154282 GTCATCGTCGTCGCTGTCA 60.154 57.895 5.86 0.00 35.19 3.58
1886 5751 1.682684 AACGATGCCTCCCTCGTCT 60.683 57.895 0.00 0.00 46.59 4.18
2215 6282 1.334384 GGAAGAGGAGTGGGAGGAGC 61.334 65.000 0.00 0.00 0.00 4.70
2419 6601 4.308458 CACTGTTCCACCGGCCGA 62.308 66.667 30.73 2.40 0.00 5.54
2684 6890 1.450669 GGAGGCGCCGGAATGTTTA 60.451 57.895 23.20 0.00 0.00 2.01
2929 7356 2.950617 TTTATAGCCGCCGGGGAGGA 62.951 60.000 21.95 4.26 45.00 3.71
3130 7578 1.540435 AAAACCATTTCGCCCGGCAT 61.540 50.000 10.77 0.00 0.00 4.40
3299 7753 2.178890 GCTCGGCTGGAGATGCTTG 61.179 63.158 9.12 0.00 46.23 4.01
3321 7775 2.083774 CAATGCCTTGGCTTACTTCGA 58.916 47.619 13.18 0.00 0.00 3.71
3325 7779 3.531538 TGCCTTGGCTTACTTCGATTAG 58.468 45.455 13.18 0.00 0.00 1.73
3326 7780 2.288186 GCCTTGGCTTACTTCGATTAGC 59.712 50.000 4.11 0.00 0.00 3.09
3356 7810 3.457012 ACCAGGGTGTAGTGTTTACTGTT 59.543 43.478 0.00 0.00 37.78 3.16
3395 7849 4.873817 TCCAAGCAGAATCAACAACATTG 58.126 39.130 0.00 0.00 0.00 2.82
3418 7891 2.838202 TGCTTGGGCTTAGTAGCTTACT 59.162 45.455 0.00 0.00 46.90 2.24
3502 7975 9.482627 CTTATTACTTAGTGGCTTCTTGGATAG 57.517 37.037 0.00 0.00 0.00 2.08
3513 7986 3.845781 TCTTGGATAGGATCAAGCACC 57.154 47.619 0.00 0.00 39.92 5.01
3531 8004 1.533711 CCATTGGGGCCTCTACCAG 59.466 63.158 3.07 0.00 38.16 4.00
3538 8011 1.694693 GGGGCCTCTACCAGGTAATCA 60.695 57.143 0.84 0.00 45.61 2.57
3541 8014 2.772515 GGCCTCTACCAGGTAATCAACT 59.227 50.000 0.00 0.00 45.61 3.16
3566 8039 3.405831 CTCTCTGTCATCAACCAAGCAA 58.594 45.455 0.00 0.00 0.00 3.91
3569 8042 3.286353 TCTGTCATCAACCAAGCAACAA 58.714 40.909 0.00 0.00 0.00 2.83
3571 8044 2.223456 TGTCATCAACCAAGCAACAACG 60.223 45.455 0.00 0.00 0.00 4.10
3572 8045 2.032799 GTCATCAACCAAGCAACAACGA 59.967 45.455 0.00 0.00 0.00 3.85
3580 8053 3.074412 CCAAGCAACAACGATACTCCTT 58.926 45.455 0.00 0.00 0.00 3.36
3583 8056 3.740115 AGCAACAACGATACTCCTTTGT 58.260 40.909 0.00 0.00 33.59 2.83
3595 8068 7.228706 ACGATACTCCTTTGTCAACATTTCTTT 59.771 33.333 0.00 0.00 0.00 2.52
3627 8100 9.959749 TTAACATTTCTTCAGTAATCAACCAAC 57.040 29.630 0.00 0.00 0.00 3.77
3635 8108 1.885887 GTAATCAACCAACCAGCAGCA 59.114 47.619 0.00 0.00 0.00 4.41
3669 8144 5.893824 AGGGTCAACATTTCTTCAGAGTTTT 59.106 36.000 0.00 0.00 0.00 2.43
3716 8191 5.107607 GCTTTAGTTGTCGTTCGATTCAGAA 60.108 40.000 0.00 0.00 0.00 3.02
3725 8200 5.960105 GTCGTTCGATTCAGAATTTCAATCC 59.040 40.000 0.00 0.00 32.25 3.01
3747 8222 0.394216 TATTGTGCTTGCAGGGCGAT 60.394 50.000 0.00 1.11 0.00 4.58
3762 8237 4.760047 GATGCCGACGGTGGTGCT 62.760 66.667 16.73 0.00 0.00 4.40
3763 8238 4.329545 ATGCCGACGGTGGTGCTT 62.330 61.111 16.73 0.00 0.00 3.91
3766 8241 3.345808 CCGACGGTGGTGCTTGTG 61.346 66.667 5.48 0.00 0.00 3.33
3767 8242 3.345808 CGACGGTGGTGCTTGTGG 61.346 66.667 0.00 0.00 0.00 4.17
3768 8243 2.203153 GACGGTGGTGCTTGTGGT 60.203 61.111 0.00 0.00 0.00 4.16
3769 8244 2.515991 ACGGTGGTGCTTGTGGTG 60.516 61.111 0.00 0.00 0.00 4.17
3770 8245 2.515991 CGGTGGTGCTTGTGGTGT 60.516 61.111 0.00 0.00 0.00 4.16
3771 8246 2.118404 CGGTGGTGCTTGTGGTGTT 61.118 57.895 0.00 0.00 0.00 3.32
3772 8247 1.437160 GGTGGTGCTTGTGGTGTTG 59.563 57.895 0.00 0.00 0.00 3.33
3773 8248 1.319614 GGTGGTGCTTGTGGTGTTGT 61.320 55.000 0.00 0.00 0.00 3.32
3774 8249 1.384525 GTGGTGCTTGTGGTGTTGTA 58.615 50.000 0.00 0.00 0.00 2.41
3775 8250 1.333619 GTGGTGCTTGTGGTGTTGTAG 59.666 52.381 0.00 0.00 0.00 2.74
3776 8251 0.951558 GGTGCTTGTGGTGTTGTAGG 59.048 55.000 0.00 0.00 0.00 3.18
3777 8252 1.675552 GTGCTTGTGGTGTTGTAGGT 58.324 50.000 0.00 0.00 0.00 3.08
3778 8253 1.602377 GTGCTTGTGGTGTTGTAGGTC 59.398 52.381 0.00 0.00 0.00 3.85
3779 8254 1.488812 TGCTTGTGGTGTTGTAGGTCT 59.511 47.619 0.00 0.00 0.00 3.85
3780 8255 2.092646 TGCTTGTGGTGTTGTAGGTCTT 60.093 45.455 0.00 0.00 0.00 3.01
3781 8256 2.290641 GCTTGTGGTGTTGTAGGTCTTG 59.709 50.000 0.00 0.00 0.00 3.02
3782 8257 1.961793 TGTGGTGTTGTAGGTCTTGC 58.038 50.000 0.00 0.00 0.00 4.01
3796 8271 5.153950 AGGTCTTGCTGTAGTTTTAGAGG 57.846 43.478 0.00 0.00 0.00 3.69
3798 8273 4.930405 GGTCTTGCTGTAGTTTTAGAGGTC 59.070 45.833 0.00 0.00 0.00 3.85
3804 8279 6.461640 TGCTGTAGTTTTAGAGGTCTTAACC 58.538 40.000 0.00 0.00 46.87 2.85
3847 8322 2.417933 AGTAGCAAGCAAGCTGATTTCG 59.582 45.455 12.54 0.00 46.11 3.46
3860 8335 4.569966 AGCTGATTTCGAGTAGCAATTCTG 59.430 41.667 12.58 0.00 38.59 3.02
3897 8372 6.901300 TCTTCTCTTCTGGAGTAGTATAGCA 58.099 40.000 0.00 0.00 42.40 3.49
3966 8441 5.935789 GCACTTGTAGACACCCACTAAATTA 59.064 40.000 0.00 0.00 0.00 1.40
3967 8442 6.428771 GCACTTGTAGACACCCACTAAATTAA 59.571 38.462 0.00 0.00 0.00 1.40
3968 8443 7.040961 GCACTTGTAGACACCCACTAAATTAAA 60.041 37.037 0.00 0.00 0.00 1.52
3969 8444 9.010029 CACTTGTAGACACCCACTAAATTAAAT 57.990 33.333 0.00 0.00 0.00 1.40
3970 8445 9.582648 ACTTGTAGACACCCACTAAATTAAATT 57.417 29.630 0.00 0.00 0.00 1.82
3973 8448 9.675464 TGTAGACACCCACTAAATTAAATTAGG 57.325 33.333 13.55 1.45 37.24 2.69
3974 8449 9.117183 GTAGACACCCACTAAATTAAATTAGGG 57.883 37.037 13.55 9.84 37.24 3.53
3975 8450 7.935405 AGACACCCACTAAATTAAATTAGGGA 58.065 34.615 13.18 0.00 38.34 4.20
3976 8451 7.832685 AGACACCCACTAAATTAAATTAGGGAC 59.167 37.037 13.18 5.58 38.34 4.46
3977 8452 7.471890 ACACCCACTAAATTAAATTAGGGACA 58.528 34.615 13.18 0.00 38.34 4.02
3978 8453 7.951245 ACACCCACTAAATTAAATTAGGGACAA 59.049 33.333 13.18 0.00 38.34 3.18
3979 8454 8.977412 CACCCACTAAATTAAATTAGGGACAAT 58.023 33.333 13.18 0.00 38.34 2.71
3980 8455 9.555411 ACCCACTAAATTAAATTAGGGACAATT 57.445 29.630 13.18 0.00 38.34 2.32
3981 8456 9.816354 CCCACTAAATTAAATTAGGGACAATTG 57.184 33.333 13.18 3.24 38.34 2.32
3982 8457 9.313118 CCACTAAATTAAATTAGGGACAATTGC 57.687 33.333 13.18 0.00 38.34 3.56
3983 8458 9.868277 CACTAAATTAAATTAGGGACAATTGCA 57.132 29.630 13.55 0.00 38.34 4.08
3991 8466 8.560355 AAATTAGGGACAATTGCATTTTTACC 57.440 30.769 5.05 1.15 0.00 2.85
3992 8467 4.551702 AGGGACAATTGCATTTTTACCC 57.448 40.909 5.05 10.58 35.53 3.69
3993 8468 3.263170 AGGGACAATTGCATTTTTACCCC 59.737 43.478 5.05 12.57 35.87 4.95
3994 8469 3.263170 GGGACAATTGCATTTTTACCCCT 59.737 43.478 5.05 0.00 0.00 4.79
3995 8470 4.468153 GGGACAATTGCATTTTTACCCCTA 59.532 41.667 5.05 0.00 0.00 3.53
3996 8471 5.395214 GGGACAATTGCATTTTTACCCCTAG 60.395 44.000 5.05 0.00 0.00 3.02
3997 8472 5.186992 GGACAATTGCATTTTTACCCCTAGT 59.813 40.000 5.05 0.00 0.00 2.57
3998 8473 6.295632 GGACAATTGCATTTTTACCCCTAGTT 60.296 38.462 5.05 0.00 0.00 2.24
3999 8474 6.463360 ACAATTGCATTTTTACCCCTAGTTG 58.537 36.000 5.05 0.00 0.00 3.16
4000 8475 5.675684 ATTGCATTTTTACCCCTAGTTGG 57.324 39.130 0.00 0.00 0.00 3.77
4001 8476 4.120946 TGCATTTTTACCCCTAGTTGGT 57.879 40.909 6.45 6.45 39.97 3.67
4002 8477 4.484912 TGCATTTTTACCCCTAGTTGGTT 58.515 39.130 6.51 0.00 37.31 3.67
4003 8478 4.525100 TGCATTTTTACCCCTAGTTGGTTC 59.475 41.667 6.51 0.00 37.31 3.62
4004 8479 4.081862 GCATTTTTACCCCTAGTTGGTTCC 60.082 45.833 6.51 0.00 37.31 3.62
4005 8480 5.330233 CATTTTTACCCCTAGTTGGTTCCT 58.670 41.667 6.51 0.00 37.31 3.36
4006 8481 6.486941 CATTTTTACCCCTAGTTGGTTCCTA 58.513 40.000 6.51 0.00 37.31 2.94
4007 8482 5.503634 TTTTACCCCTAGTTGGTTCCTAC 57.496 43.478 6.51 0.00 37.31 3.18
4008 8483 1.962558 ACCCCTAGTTGGTTCCTACC 58.037 55.000 0.30 0.00 45.26 3.18
4009 8484 1.210538 CCCCTAGTTGGTTCCTACCC 58.789 60.000 0.30 0.00 44.35 3.69
4010 8485 1.556238 CCCCTAGTTGGTTCCTACCCA 60.556 57.143 0.30 0.00 44.35 4.51
4011 8486 2.488836 CCCTAGTTGGTTCCTACCCAT 58.511 52.381 0.30 0.00 44.35 4.00
4012 8487 2.172717 CCCTAGTTGGTTCCTACCCATG 59.827 54.545 0.30 0.00 44.35 3.66
4013 8488 2.172717 CCTAGTTGGTTCCTACCCATGG 59.827 54.545 4.14 4.14 44.35 3.66
4014 8489 0.999712 AGTTGGTTCCTACCCATGGG 59.000 55.000 30.23 30.23 44.35 4.00
4033 8508 3.994204 GGTTTTGCCCTTACTTTTCGA 57.006 42.857 0.00 0.00 0.00 3.71
4034 8509 3.897325 GGTTTTGCCCTTACTTTTCGAG 58.103 45.455 0.00 0.00 0.00 4.04
4035 8510 3.305964 GTTTTGCCCTTACTTTTCGAGC 58.694 45.455 0.00 0.00 0.00 5.03
4036 8511 2.561478 TTGCCCTTACTTTTCGAGCT 57.439 45.000 0.00 0.00 0.00 4.09
4037 8512 2.561478 TGCCCTTACTTTTCGAGCTT 57.439 45.000 0.00 0.00 0.00 3.74
4038 8513 2.151202 TGCCCTTACTTTTCGAGCTTG 58.849 47.619 0.00 0.00 0.00 4.01
4039 8514 1.135660 GCCCTTACTTTTCGAGCTTGC 60.136 52.381 0.00 0.00 0.00 4.01
4040 8515 2.427506 CCCTTACTTTTCGAGCTTGCT 58.572 47.619 0.00 0.00 0.00 3.91
4041 8516 2.416893 CCCTTACTTTTCGAGCTTGCTC 59.583 50.000 12.20 12.20 0.00 4.26
4042 8517 3.067106 CCTTACTTTTCGAGCTTGCTCA 58.933 45.455 20.59 6.97 0.00 4.26
4043 8518 3.124297 CCTTACTTTTCGAGCTTGCTCAG 59.876 47.826 20.59 13.08 0.00 3.35
4044 8519 2.246719 ACTTTTCGAGCTTGCTCAGT 57.753 45.000 20.59 13.64 0.00 3.41
4045 8520 2.565841 ACTTTTCGAGCTTGCTCAGTT 58.434 42.857 20.59 1.73 0.00 3.16
4046 8521 2.945668 ACTTTTCGAGCTTGCTCAGTTT 59.054 40.909 20.59 0.00 0.00 2.66
4047 8522 3.378427 ACTTTTCGAGCTTGCTCAGTTTT 59.622 39.130 20.59 0.00 0.00 2.43
4048 8523 3.338818 TTTCGAGCTTGCTCAGTTTTG 57.661 42.857 20.59 5.26 0.00 2.44
4049 8524 0.588252 TCGAGCTTGCTCAGTTTTGC 59.412 50.000 20.59 0.00 0.00 3.68
4050 8525 0.386478 CGAGCTTGCTCAGTTTTGCC 60.386 55.000 20.59 0.00 0.00 4.52
4051 8526 0.038801 GAGCTTGCTCAGTTTTGCCC 60.039 55.000 16.71 0.00 0.00 5.36
4052 8527 0.468771 AGCTTGCTCAGTTTTGCCCT 60.469 50.000 0.00 0.00 0.00 5.19
4053 8528 0.390492 GCTTGCTCAGTTTTGCCCTT 59.610 50.000 0.00 0.00 0.00 3.95
4054 8529 1.613437 GCTTGCTCAGTTTTGCCCTTA 59.387 47.619 0.00 0.00 0.00 2.69
4055 8530 2.608016 GCTTGCTCAGTTTTGCCCTTAC 60.608 50.000 0.00 0.00 0.00 2.34
4056 8531 2.656947 TGCTCAGTTTTGCCCTTACT 57.343 45.000 0.00 0.00 0.00 2.24
4057 8532 2.944129 TGCTCAGTTTTGCCCTTACTT 58.056 42.857 0.00 0.00 0.00 2.24
4058 8533 3.295973 TGCTCAGTTTTGCCCTTACTTT 58.704 40.909 0.00 0.00 0.00 2.66
4059 8534 3.704061 TGCTCAGTTTTGCCCTTACTTTT 59.296 39.130 0.00 0.00 0.00 2.27
4060 8535 4.161377 TGCTCAGTTTTGCCCTTACTTTTT 59.839 37.500 0.00 0.00 0.00 1.94
4061 8536 4.745125 GCTCAGTTTTGCCCTTACTTTTTC 59.255 41.667 0.00 0.00 0.00 2.29
4062 8537 5.270893 TCAGTTTTGCCCTTACTTTTTCC 57.729 39.130 0.00 0.00 0.00 3.13
4063 8538 4.048504 CAGTTTTGCCCTTACTTTTTCCG 58.951 43.478 0.00 0.00 0.00 4.30
4064 8539 3.702548 AGTTTTGCCCTTACTTTTTCCGT 59.297 39.130 0.00 0.00 0.00 4.69
4065 8540 3.994204 TTTGCCCTTACTTTTTCCGTC 57.006 42.857 0.00 0.00 0.00 4.79
4066 8541 2.642154 TGCCCTTACTTTTTCCGTCA 57.358 45.000 0.00 0.00 0.00 4.35
4067 8542 3.149005 TGCCCTTACTTTTTCCGTCAT 57.851 42.857 0.00 0.00 0.00 3.06
4068 8543 2.817258 TGCCCTTACTTTTTCCGTCATG 59.183 45.455 0.00 0.00 0.00 3.07
4069 8544 2.163613 GCCCTTACTTTTTCCGTCATGG 59.836 50.000 0.00 0.00 40.09 3.66
4070 8545 3.418047 CCCTTACTTTTTCCGTCATGGT 58.582 45.455 0.00 0.00 39.52 3.55
4071 8546 3.439129 CCCTTACTTTTTCCGTCATGGTC 59.561 47.826 0.00 0.00 39.52 4.02
4072 8547 3.439129 CCTTACTTTTTCCGTCATGGTCC 59.561 47.826 0.00 0.00 39.52 4.46
4073 8548 1.905637 ACTTTTTCCGTCATGGTCCC 58.094 50.000 0.00 0.00 39.52 4.46
4074 8549 1.423921 ACTTTTTCCGTCATGGTCCCT 59.576 47.619 0.00 0.00 39.52 4.20
4075 8550 2.084546 CTTTTTCCGTCATGGTCCCTC 58.915 52.381 0.00 0.00 39.52 4.30
4076 8551 0.036765 TTTTCCGTCATGGTCCCTCG 60.037 55.000 0.00 0.00 39.52 4.63
4077 8552 0.901114 TTTCCGTCATGGTCCCTCGA 60.901 55.000 0.00 0.00 39.52 4.04
4078 8553 0.901114 TTCCGTCATGGTCCCTCGAA 60.901 55.000 0.00 0.00 39.52 3.71
4079 8554 0.686441 TCCGTCATGGTCCCTCGAAT 60.686 55.000 0.00 0.00 39.52 3.34
4080 8555 0.530650 CCGTCATGGTCCCTCGAATG 60.531 60.000 0.00 0.00 0.00 2.67
4081 8556 1.154205 CGTCATGGTCCCTCGAATGC 61.154 60.000 0.00 0.00 0.00 3.56
4082 8557 0.815615 GTCATGGTCCCTCGAATGCC 60.816 60.000 0.00 0.00 0.00 4.40
4083 8558 1.526917 CATGGTCCCTCGAATGCCC 60.527 63.158 0.00 0.00 0.00 5.36
4084 8559 1.694169 ATGGTCCCTCGAATGCCCT 60.694 57.895 0.00 0.00 0.00 5.19
4085 8560 1.281925 ATGGTCCCTCGAATGCCCTT 61.282 55.000 0.00 0.00 0.00 3.95
4086 8561 1.303282 GGTCCCTCGAATGCCCTTT 59.697 57.895 0.00 0.00 0.00 3.11
4087 8562 1.032114 GGTCCCTCGAATGCCCTTTG 61.032 60.000 0.00 0.00 0.00 2.77
4088 8563 0.035439 GTCCCTCGAATGCCCTTTGA 60.035 55.000 0.00 0.00 0.00 2.69
4089 8564 0.035439 TCCCTCGAATGCCCTTTGAC 60.035 55.000 0.00 0.00 0.00 3.18
4090 8565 0.035056 CCCTCGAATGCCCTTTGACT 60.035 55.000 0.00 0.00 0.00 3.41
4091 8566 1.089920 CCTCGAATGCCCTTTGACTG 58.910 55.000 0.00 0.00 0.00 3.51
4092 8567 1.611673 CCTCGAATGCCCTTTGACTGT 60.612 52.381 0.00 0.00 0.00 3.55
4093 8568 2.154462 CTCGAATGCCCTTTGACTGTT 58.846 47.619 0.00 0.00 0.00 3.16
4094 8569 2.554032 CTCGAATGCCCTTTGACTGTTT 59.446 45.455 0.00 0.00 0.00 2.83
4095 8570 2.293122 TCGAATGCCCTTTGACTGTTTG 59.707 45.455 0.00 0.00 0.00 2.93
4096 8571 2.293122 CGAATGCCCTTTGACTGTTTGA 59.707 45.455 0.00 0.00 0.00 2.69
4097 8572 3.642705 GAATGCCCTTTGACTGTTTGAC 58.357 45.455 0.00 0.00 0.00 3.18
4098 8573 1.398692 TGCCCTTTGACTGTTTGACC 58.601 50.000 0.00 0.00 0.00 4.02
4099 8574 1.341482 TGCCCTTTGACTGTTTGACCA 60.341 47.619 0.00 0.00 0.00 4.02
4100 8575 1.754226 GCCCTTTGACTGTTTGACCAA 59.246 47.619 0.00 0.00 0.00 3.67
4101 8576 2.167487 GCCCTTTGACTGTTTGACCAAA 59.833 45.455 0.00 0.00 0.00 3.28
4102 8577 3.368948 GCCCTTTGACTGTTTGACCAAAA 60.369 43.478 0.00 0.00 31.33 2.44
4120 8595 9.936759 TGACCAAAACTTTGAAAATTCTTAACT 57.063 25.926 3.72 0.00 40.55 2.24
4189 8664 9.503427 GTTCAGATAAACATTACCTTTATGTGC 57.497 33.333 0.00 0.00 35.94 4.57
4190 8665 8.800370 TCAGATAAACATTACCTTTATGTGCA 57.200 30.769 0.00 0.00 35.94 4.57
4191 8666 9.407380 TCAGATAAACATTACCTTTATGTGCAT 57.593 29.630 0.00 0.00 35.94 3.96
4199 8674 9.970395 ACATTACCTTTATGTGCATATCATTTG 57.030 29.630 0.00 0.00 35.03 2.32
4200 8675 8.918658 CATTACCTTTATGTGCATATCATTTGC 58.081 33.333 0.00 0.00 40.55 3.68
4209 8684 5.190992 TGCATATCATTTGCATTCAGGAC 57.809 39.130 0.00 0.00 44.73 3.85
4210 8685 4.645588 TGCATATCATTTGCATTCAGGACA 59.354 37.500 0.00 0.00 44.73 4.02
4211 8686 5.127356 TGCATATCATTTGCATTCAGGACAA 59.873 36.000 0.00 0.00 44.73 3.18
4212 8687 6.044046 GCATATCATTTGCATTCAGGACAAA 58.956 36.000 0.00 0.00 39.90 2.83
4213 8688 6.535865 GCATATCATTTGCATTCAGGACAAAA 59.464 34.615 0.00 0.00 39.90 2.44
4214 8689 7.254319 GCATATCATTTGCATTCAGGACAAAAG 60.254 37.037 0.00 0.00 39.90 2.27
4215 8690 4.309099 TCATTTGCATTCAGGACAAAAGC 58.691 39.130 0.00 0.00 36.90 3.51
4216 8691 3.815856 TTTGCATTCAGGACAAAAGCA 57.184 38.095 0.00 0.00 30.75 3.91
4217 8692 2.798976 TGCATTCAGGACAAAAGCAC 57.201 45.000 0.00 0.00 0.00 4.40
4218 8693 1.340889 TGCATTCAGGACAAAAGCACC 59.659 47.619 0.00 0.00 0.00 5.01
4219 8694 1.337167 GCATTCAGGACAAAAGCACCC 60.337 52.381 0.00 0.00 0.00 4.61
4220 8695 2.242043 CATTCAGGACAAAAGCACCCT 58.758 47.619 0.00 0.00 0.00 4.34
4221 8696 2.452600 TTCAGGACAAAAGCACCCTT 57.547 45.000 0.00 0.00 0.00 3.95
4222 8697 2.452600 TCAGGACAAAAGCACCCTTT 57.547 45.000 0.00 0.00 42.93 3.11
4223 8698 3.586470 TCAGGACAAAAGCACCCTTTA 57.414 42.857 0.00 0.00 40.30 1.85
4224 8699 3.904717 TCAGGACAAAAGCACCCTTTAA 58.095 40.909 0.00 0.00 40.30 1.52
4225 8700 4.282496 TCAGGACAAAAGCACCCTTTAAA 58.718 39.130 0.00 0.00 40.30 1.52
4226 8701 4.098807 TCAGGACAAAAGCACCCTTTAAAC 59.901 41.667 0.00 0.00 40.30 2.01
4227 8702 4.099419 CAGGACAAAAGCACCCTTTAAACT 59.901 41.667 0.00 0.00 40.30 2.66
4228 8703 5.300792 CAGGACAAAAGCACCCTTTAAACTA 59.699 40.000 0.00 0.00 40.30 2.24
4229 8704 5.301045 AGGACAAAAGCACCCTTTAAACTAC 59.699 40.000 0.00 0.00 40.30 2.73
4230 8705 5.508489 GGACAAAAGCACCCTTTAAACTACC 60.508 44.000 0.00 0.00 40.30 3.18
4231 8706 5.205821 ACAAAAGCACCCTTTAAACTACCT 58.794 37.500 0.00 0.00 40.30 3.08
4232 8707 5.068591 ACAAAAGCACCCTTTAAACTACCTG 59.931 40.000 0.00 0.00 40.30 4.00
4233 8708 4.717279 AAGCACCCTTTAAACTACCTGA 57.283 40.909 0.00 0.00 0.00 3.86
4234 8709 4.287766 AGCACCCTTTAAACTACCTGAG 57.712 45.455 0.00 0.00 0.00 3.35
4235 8710 3.009143 AGCACCCTTTAAACTACCTGAGG 59.991 47.826 0.00 0.00 0.00 3.86
4236 8711 3.244805 GCACCCTTTAAACTACCTGAGGT 60.245 47.826 10.00 10.00 40.16 3.85
4237 8712 4.019950 GCACCCTTTAAACTACCTGAGGTA 60.020 45.833 11.47 11.47 37.09 3.08
4238 8713 5.513614 GCACCCTTTAAACTACCTGAGGTAA 60.514 44.000 13.13 0.00 37.76 2.85
4239 8714 6.718294 CACCCTTTAAACTACCTGAGGTAAT 58.282 40.000 13.13 0.00 37.76 1.89
4240 8715 7.173032 CACCCTTTAAACTACCTGAGGTAATT 58.827 38.462 13.13 6.12 37.76 1.40
4241 8716 8.323567 CACCCTTTAAACTACCTGAGGTAATTA 58.676 37.037 13.13 11.72 37.76 1.40
4242 8717 8.893560 ACCCTTTAAACTACCTGAGGTAATTAA 58.106 33.333 13.13 16.31 37.76 1.40
4243 8718 9.916360 CCCTTTAAACTACCTGAGGTAATTAAT 57.084 33.333 20.78 6.31 37.76 1.40
4315 8790 9.800433 TCATGAATAAAAATTACATGCGAATGT 57.200 25.926 14.84 14.84 38.39 2.71
4328 8803 6.486657 CATGCGAATGTATGTGATGTTTTC 57.513 37.500 0.00 0.00 33.95 2.29
4329 8804 5.878332 TGCGAATGTATGTGATGTTTTCT 57.122 34.783 0.00 0.00 0.00 2.52
4330 8805 5.630061 TGCGAATGTATGTGATGTTTTCTG 58.370 37.500 0.00 0.00 0.00 3.02
4331 8806 5.411053 TGCGAATGTATGTGATGTTTTCTGA 59.589 36.000 0.00 0.00 0.00 3.27
4332 8807 6.072783 TGCGAATGTATGTGATGTTTTCTGAA 60.073 34.615 0.00 0.00 0.00 3.02
4333 8808 6.249260 GCGAATGTATGTGATGTTTTCTGAAC 59.751 38.462 0.00 0.00 0.00 3.18
4334 8809 7.297391 CGAATGTATGTGATGTTTTCTGAACA 58.703 34.615 0.00 0.00 34.31 3.18
4335 8810 7.964559 CGAATGTATGTGATGTTTTCTGAACAT 59.035 33.333 4.22 4.22 42.98 2.71
4345 8820 8.674263 GATGTTTTCTGAACATCCAGATATCT 57.326 34.615 16.97 0.00 46.55 1.98
4346 8821 9.118300 GATGTTTTCTGAACATCCAGATATCTT 57.882 33.333 16.97 0.00 46.55 2.40
4352 8827 8.613060 TCTGAACATCCAGATATCTTATTTGC 57.387 34.615 1.33 0.00 38.18 3.68
4353 8828 8.212995 TCTGAACATCCAGATATCTTATTTGCA 58.787 33.333 1.33 0.00 38.18 4.08
4354 8829 8.929260 TGAACATCCAGATATCTTATTTGCAT 57.071 30.769 1.33 0.00 0.00 3.96
4355 8830 9.358406 TGAACATCCAGATATCTTATTTGCATT 57.642 29.630 1.33 0.00 0.00 3.56
4367 8842 8.679288 ATCTTATTTGCATTTTTCTGAGTTCG 57.321 30.769 0.00 0.00 0.00 3.95
4368 8843 7.648142 TCTTATTTGCATTTTTCTGAGTTCGT 58.352 30.769 0.00 0.00 0.00 3.85
4369 8844 8.779303 TCTTATTTGCATTTTTCTGAGTTCGTA 58.221 29.630 0.00 0.00 0.00 3.43
4370 8845 9.559958 CTTATTTGCATTTTTCTGAGTTCGTAT 57.440 29.630 0.00 0.00 0.00 3.06
4371 8846 9.554724 TTATTTGCATTTTTCTGAGTTCGTATC 57.445 29.630 0.00 0.00 0.00 2.24
4372 8847 6.552859 TTGCATTTTTCTGAGTTCGTATCA 57.447 33.333 0.00 0.00 0.00 2.15
4373 8848 6.741992 TGCATTTTTCTGAGTTCGTATCAT 57.258 33.333 0.00 0.00 0.00 2.45
4374 8849 6.775088 TGCATTTTTCTGAGTTCGTATCATC 58.225 36.000 0.00 0.00 0.00 2.92
4375 8850 6.595326 TGCATTTTTCTGAGTTCGTATCATCT 59.405 34.615 0.00 0.00 0.00 2.90
4376 8851 7.119699 TGCATTTTTCTGAGTTCGTATCATCTT 59.880 33.333 0.00 0.00 0.00 2.40
4377 8852 7.427606 GCATTTTTCTGAGTTCGTATCATCTTG 59.572 37.037 0.00 0.00 0.00 3.02
4378 8853 7.962964 TTTTTCTGAGTTCGTATCATCTTGT 57.037 32.000 0.00 0.00 0.00 3.16
4379 8854 7.962964 TTTTCTGAGTTCGTATCATCTTGTT 57.037 32.000 0.00 0.00 0.00 2.83
4380 8855 9.483916 TTTTTCTGAGTTCGTATCATCTTGTTA 57.516 29.630 0.00 0.00 0.00 2.41
4381 8856 9.653287 TTTTCTGAGTTCGTATCATCTTGTTAT 57.347 29.630 0.00 0.00 0.00 1.89
4382 8857 8.634475 TTCTGAGTTCGTATCATCTTGTTATG 57.366 34.615 0.00 0.00 0.00 1.90
4383 8858 7.996385 TCTGAGTTCGTATCATCTTGTTATGA 58.004 34.615 0.00 0.00 40.07 2.15
4384 8859 8.466798 TCTGAGTTCGTATCATCTTGTTATGAA 58.533 33.333 0.00 0.00 39.25 2.57
4385 8860 9.254133 CTGAGTTCGTATCATCTTGTTATGAAT 57.746 33.333 0.00 0.00 39.25 2.57
4386 8861 9.034544 TGAGTTCGTATCATCTTGTTATGAATG 57.965 33.333 0.00 0.00 39.25 2.67
4387 8862 8.948631 AGTTCGTATCATCTTGTTATGAATGT 57.051 30.769 0.00 0.00 39.25 2.71
4388 8863 9.383519 AGTTCGTATCATCTTGTTATGAATGTT 57.616 29.630 0.00 0.00 39.25 2.71
4389 8864 9.638300 GTTCGTATCATCTTGTTATGAATGTTC 57.362 33.333 0.00 0.00 39.25 3.18
4390 8865 9.599866 TTCGTATCATCTTGTTATGAATGTTCT 57.400 29.630 0.00 0.00 39.25 3.01
4395 8870 8.996024 TCATCTTGTTATGAATGTTCTAACGA 57.004 30.769 0.00 1.42 32.97 3.85
4396 8871 8.869897 TCATCTTGTTATGAATGTTCTAACGAC 58.130 33.333 0.00 0.00 32.97 4.34
4397 8872 8.873830 CATCTTGTTATGAATGTTCTAACGACT 58.126 33.333 0.00 0.00 0.00 4.18
4398 8873 8.827177 TCTTGTTATGAATGTTCTAACGACTT 57.173 30.769 0.00 0.00 0.00 3.01
4399 8874 9.268268 TCTTGTTATGAATGTTCTAACGACTTT 57.732 29.630 0.00 0.00 0.00 2.66
4400 8875 9.318041 CTTGTTATGAATGTTCTAACGACTTTG 57.682 33.333 0.00 0.00 0.00 2.77
4401 8876 8.596271 TGTTATGAATGTTCTAACGACTTTGA 57.404 30.769 0.00 0.00 0.00 2.69
4402 8877 8.492748 TGTTATGAATGTTCTAACGACTTTGAC 58.507 33.333 0.00 0.00 0.00 3.18
4403 8878 5.917541 TGAATGTTCTAACGACTTTGACC 57.082 39.130 0.00 0.00 0.00 4.02
4404 8879 5.361427 TGAATGTTCTAACGACTTTGACCA 58.639 37.500 0.00 0.00 0.00 4.02
4405 8880 5.995282 TGAATGTTCTAACGACTTTGACCAT 59.005 36.000 0.00 0.00 0.00 3.55
4406 8881 6.485313 TGAATGTTCTAACGACTTTGACCATT 59.515 34.615 0.00 0.00 30.63 3.16
4407 8882 7.658167 TGAATGTTCTAACGACTTTGACCATTA 59.342 33.333 0.00 0.00 29.00 1.90
4408 8883 8.561738 AATGTTCTAACGACTTTGACCATTAT 57.438 30.769 0.00 0.00 27.72 1.28
4409 8884 7.972832 TGTTCTAACGACTTTGACCATTATT 57.027 32.000 0.00 0.00 0.00 1.40
4410 8885 8.385898 TGTTCTAACGACTTTGACCATTATTT 57.614 30.769 0.00 0.00 0.00 1.40
4411 8886 8.286800 TGTTCTAACGACTTTGACCATTATTTG 58.713 33.333 0.00 0.00 0.00 2.32
4434 8909 9.959749 TTTGGAAACTTCATAACAAGTTGATAC 57.040 29.630 10.54 0.00 44.28 2.24
4435 8910 7.802738 TGGAAACTTCATAACAAGTTGATACG 58.197 34.615 10.54 0.00 44.28 3.06
4436 8911 7.658167 TGGAAACTTCATAACAAGTTGATACGA 59.342 33.333 10.54 0.00 44.28 3.43
4437 8912 8.500773 GGAAACTTCATAACAAGTTGATACGAA 58.499 33.333 10.54 5.69 44.28 3.85
4438 8913 9.314501 GAAACTTCATAACAAGTTGATACGAAC 57.685 33.333 10.54 0.00 44.28 3.95
4439 8914 8.603242 AACTTCATAACAAGTTGATACGAACT 57.397 30.769 10.54 0.00 43.57 3.01
4440 8915 8.240883 ACTTCATAACAAGTTGATACGAACTC 57.759 34.615 10.54 0.00 35.01 3.01
4441 8916 7.870954 ACTTCATAACAAGTTGATACGAACTCA 59.129 33.333 10.54 0.00 35.01 3.41
4442 8917 7.812309 TCATAACAAGTTGATACGAACTCAG 57.188 36.000 10.54 0.00 35.01 3.35
4443 8918 7.599171 TCATAACAAGTTGATACGAACTCAGA 58.401 34.615 10.54 0.00 35.01 3.27
4444 8919 8.085909 TCATAACAAGTTGATACGAACTCAGAA 58.914 33.333 10.54 0.00 35.01 3.02
4445 8920 8.708742 CATAACAAGTTGATACGAACTCAGAAA 58.291 33.333 10.54 0.00 35.01 2.52
4446 8921 7.548196 AACAAGTTGATACGAACTCAGAAAA 57.452 32.000 10.54 0.00 35.01 2.29
4447 8922 7.548196 ACAAGTTGATACGAACTCAGAAAAA 57.452 32.000 10.54 0.00 35.01 1.94
4448 8923 8.154649 ACAAGTTGATACGAACTCAGAAAAAT 57.845 30.769 10.54 0.00 35.01 1.82
4449 8924 8.070171 ACAAGTTGATACGAACTCAGAAAAATG 58.930 33.333 10.54 0.00 35.01 2.32
4450 8925 6.603095 AGTTGATACGAACTCAGAAAAATGC 58.397 36.000 0.00 0.00 29.85 3.56
4451 8926 6.204688 AGTTGATACGAACTCAGAAAAATGCA 59.795 34.615 0.00 0.00 29.85 3.96
4452 8927 6.552859 TGATACGAACTCAGAAAAATGCAA 57.447 33.333 0.00 0.00 0.00 4.08
4453 8928 6.964908 TGATACGAACTCAGAAAAATGCAAA 58.035 32.000 0.00 0.00 0.00 3.68
4454 8929 7.592938 TGATACGAACTCAGAAAAATGCAAAT 58.407 30.769 0.00 0.00 0.00 2.32
4455 8930 8.726068 TGATACGAACTCAGAAAAATGCAAATA 58.274 29.630 0.00 0.00 0.00 1.40
4456 8931 9.554724 GATACGAACTCAGAAAAATGCAAATAA 57.445 29.630 0.00 0.00 0.00 1.40
4457 8932 7.858052 ACGAACTCAGAAAAATGCAAATAAG 57.142 32.000 0.00 0.00 0.00 1.73
4458 8933 7.648142 ACGAACTCAGAAAAATGCAAATAAGA 58.352 30.769 0.00 0.00 0.00 2.10
4459 8934 8.299570 ACGAACTCAGAAAAATGCAAATAAGAT 58.700 29.630 0.00 0.00 0.00 2.40
5823 11063 3.221771 TGTTGCTGCTTAACTCCATGTT 58.778 40.909 0.00 0.00 42.31 2.71
5824 11064 3.636300 TGTTGCTGCTTAACTCCATGTTT 59.364 39.130 0.00 0.00 39.89 2.83
5825 11065 4.824537 TGTTGCTGCTTAACTCCATGTTTA 59.175 37.500 0.00 0.00 39.89 2.01
5826 11066 5.476599 TGTTGCTGCTTAACTCCATGTTTAT 59.523 36.000 0.00 0.00 39.89 1.40
5827 11067 6.015519 TGTTGCTGCTTAACTCCATGTTTATT 60.016 34.615 0.00 0.00 39.89 1.40
5828 11068 6.588719 TGCTGCTTAACTCCATGTTTATTT 57.411 33.333 0.00 0.00 39.89 1.40
5829 11069 6.991938 TGCTGCTTAACTCCATGTTTATTTT 58.008 32.000 0.00 0.00 39.89 1.82
5830 11070 7.441017 TGCTGCTTAACTCCATGTTTATTTTT 58.559 30.769 0.00 0.00 39.89 1.94
5831 11071 7.384660 TGCTGCTTAACTCCATGTTTATTTTTG 59.615 33.333 0.00 0.00 39.89 2.44
5832 11072 7.384932 GCTGCTTAACTCCATGTTTATTTTTGT 59.615 33.333 0.00 0.00 39.89 2.83
5833 11073 9.906660 CTGCTTAACTCCATGTTTATTTTTGTA 57.093 29.630 0.00 0.00 39.89 2.41
5834 11074 9.685828 TGCTTAACTCCATGTTTATTTTTGTAC 57.314 29.630 0.00 0.00 39.89 2.90
5835 11075 9.908152 GCTTAACTCCATGTTTATTTTTGTACT 57.092 29.630 0.00 0.00 39.89 2.73
5838 11078 8.472007 AACTCCATGTTTATTTTTGTACTCCA 57.528 30.769 0.00 0.00 34.84 3.86
5839 11079 8.650143 ACTCCATGTTTATTTTTGTACTCCAT 57.350 30.769 0.00 0.00 0.00 3.41
5840 11080 8.522830 ACTCCATGTTTATTTTTGTACTCCATG 58.477 33.333 0.00 0.00 0.00 3.66
5841 11081 8.415950 TCCATGTTTATTTTTGTACTCCATGT 57.584 30.769 0.00 0.00 0.00 3.21
5888 11128 4.846779 TCTTGTTTATGGGTTGCTGAAC 57.153 40.909 0.00 0.00 0.00 3.18
5910 11150 2.276732 TGGAGCCTTTCTTGTTCTGG 57.723 50.000 0.00 0.00 0.00 3.86
5923 11163 7.476540 TTCTTGTTCTGGAGTAGTATTGCTA 57.523 36.000 0.00 0.00 0.00 3.49
6167 11408 2.642311 TGGGAGCACTCTTTGTTATCCA 59.358 45.455 0.00 0.00 34.16 3.41
6213 11454 3.073209 TGGGTACATGGCTTGTCTTGTTA 59.927 43.478 9.52 0.00 39.87 2.41
6408 11669 3.469008 AGTACTGTACTGTTGCAGCAA 57.531 42.857 19.09 2.83 38.97 3.91
6501 11767 7.446625 GGATTCATTCCTTCTTATGCAGTGTAT 59.553 37.037 0.00 0.00 41.78 2.29
6506 11772 8.554528 CATTCCTTCTTATGCAGTGTATTGTAG 58.445 37.037 0.00 0.00 0.00 2.74
6527 11793 5.568620 AGTCCACATTTGTCTACTCCTTT 57.431 39.130 0.00 0.00 0.00 3.11
6545 11811 4.410228 TCCTTTAGCTCTAGGTGCATCAAT 59.590 41.667 12.42 0.00 33.15 2.57
6549 11815 7.255977 CCTTTAGCTCTAGGTGCATCAATACTA 60.256 40.741 0.00 0.00 0.00 1.82
6567 11833 7.724061 TCAATACTAGTTGCTTCCTTCCTTTTT 59.276 33.333 0.00 0.00 0.00 1.94
6573 11839 7.220741 AGTTGCTTCCTTCCTTTTTATTCTC 57.779 36.000 0.00 0.00 0.00 2.87
6579 11845 7.342026 GCTTCCTTCCTTTTTATTCTCCCAATA 59.658 37.037 0.00 0.00 0.00 1.90
6602 11876 1.126846 GGTTGCTTTCGATGAGTGACG 59.873 52.381 0.00 0.00 0.00 4.35
6610 11884 0.171231 CGATGAGTGACGGAGAGCAA 59.829 55.000 0.00 0.00 0.00 3.91
6618 11892 3.961408 AGTGACGGAGAGCAATAATAGGT 59.039 43.478 0.00 0.00 0.00 3.08
6691 11966 7.961351 TGTTTCCAAATCAATACTCCAACATT 58.039 30.769 0.00 0.00 0.00 2.71
6841 12118 7.928307 TTGTTTCCAAATCATTTGTTTCCAA 57.072 28.000 9.31 4.38 38.98 3.53
6862 12139 0.251787 AATTCACCTGCCCAACTCCC 60.252 55.000 0.00 0.00 0.00 4.30
6863 12140 2.484287 ATTCACCTGCCCAACTCCCG 62.484 60.000 0.00 0.00 0.00 5.14
6886 12163 2.672996 GCGGCAAGGAAGGAGCAA 60.673 61.111 0.00 0.00 0.00 3.91
6908 12185 2.610859 GGGGGAGGAGAAGCACCA 60.611 66.667 0.00 0.00 0.00 4.17
6909 12186 2.231380 GGGGGAGGAGAAGCACCAA 61.231 63.158 0.00 0.00 0.00 3.67
6921 12198 2.281484 CACCAACGACCCTGGGTG 60.281 66.667 26.16 17.59 44.17 4.61
6936 12213 4.785453 GTGGGGAAGGAGCAGCGG 62.785 72.222 0.00 0.00 0.00 5.52
6953 12233 1.691219 GGTGGGGGAGAAGCATCAA 59.309 57.895 0.00 0.00 0.00 2.57
6962 12242 0.976641 AGAAGCATCAACGACCCTGA 59.023 50.000 0.00 0.00 0.00 3.86
6972 12252 2.427245 CGACCCTGAGCGGAGGATT 61.427 63.158 5.67 0.00 34.69 3.01
6984 12264 0.729690 GGAGGATTTGCTCGAGTTGC 59.270 55.000 15.13 0.48 0.00 4.17
7011 12291 1.112315 CAGAGGATCGAGGACCTGGG 61.112 65.000 12.24 0.00 42.67 4.45
7012 12292 1.834822 GAGGATCGAGGACCTGGGG 60.835 68.421 12.24 0.00 36.57 4.96
7055 12349 2.722201 GGCGGAGGTGGAAGACGAT 61.722 63.158 0.00 0.00 0.00 3.73
7060 12354 2.017559 GAGGTGGAAGACGATCGGGG 62.018 65.000 20.98 0.00 0.00 5.73
7068 12362 2.835431 ACGATCGGGGAGCAGAGG 60.835 66.667 20.98 0.00 0.00 3.69
7071 12365 1.467678 CGATCGGGGAGCAGAGGATT 61.468 60.000 7.38 0.00 0.00 3.01
7082 12376 4.450053 GAGCAGAGGATTCAAATGTAGCT 58.550 43.478 0.00 0.00 0.00 3.32
7087 12381 2.582636 AGGATTCAAATGTAGCTGGGGT 59.417 45.455 0.00 0.00 0.00 4.95
7091 12385 5.010012 GGATTCAAATGTAGCTGGGGTAATG 59.990 44.000 0.00 0.00 0.00 1.90
7097 12391 1.068741 GTAGCTGGGGTAATGAGGTCG 59.931 57.143 0.00 0.00 0.00 4.79
7105 12399 1.279846 GGTAATGAGGTCGTTTCCCCA 59.720 52.381 0.00 0.00 0.00 4.96
7114 12408 2.626266 GGTCGTTTCCCCAATTTTCACT 59.374 45.455 0.00 0.00 0.00 3.41
7123 12417 2.825532 CCCAATTTTCACTTGGTCGGAT 59.174 45.455 1.77 0.00 41.35 4.18
7131 12425 2.017049 CACTTGGTCGGATGGATTTCC 58.983 52.381 0.00 0.00 0.00 3.13
7143 12437 1.279846 TGGATTTCCCCAACGACCTAC 59.720 52.381 0.00 0.00 32.31 3.18
7149 12443 1.979308 TCCCCAACGACCTACATTTCA 59.021 47.619 0.00 0.00 0.00 2.69
7151 12445 2.027561 CCCCAACGACCTACATTTCAGA 60.028 50.000 0.00 0.00 0.00 3.27
7172 12466 3.644966 ACGGAGGGAAAGCATCATAAA 57.355 42.857 0.00 0.00 0.00 1.40
7266 12561 8.462016 AGAACAATATTTGCTAGACCATGAAAC 58.538 33.333 0.00 0.00 0.00 2.78
7692 12991 6.114187 TGAAATACTGAAGCTTCTGGAAGA 57.886 37.500 29.77 16.35 44.68 2.87
7821 13120 2.229784 CCCAAAGAATTGTCACTGGCTC 59.770 50.000 0.00 0.00 34.60 4.70
7921 13220 5.618056 TGCTAGAAAGATTGACAAAGCAG 57.382 39.130 4.71 0.00 34.05 4.24
7925 13224 6.128063 GCTAGAAAGATTGACAAAGCAGACAT 60.128 38.462 0.00 0.00 0.00 3.06
7982 13283 5.071788 TCTCAAATACCTGTCTCACAACCTT 59.928 40.000 0.00 0.00 0.00 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.496010 GCAATTCTAGCAGCTTCATCACAG 60.496 45.833 0.00 0.00 0.00 3.66
33 34 8.674607 GTCTATGTTTATCTTTTTCATCGGGTT 58.325 33.333 0.00 0.00 0.00 4.11
61 62 0.390124 CAACAGGCATGCCAACAACT 59.610 50.000 37.18 14.13 38.92 3.16
85 86 8.058235 TGATAACAATGATCCCCTATTTTGACA 58.942 33.333 0.00 0.00 0.00 3.58
97 98 8.849168 TCACATAAACCATGATAACAATGATCC 58.151 33.333 0.00 0.00 38.10 3.36
105 106 9.669353 CAGCTAAATCACATAAACCATGATAAC 57.331 33.333 0.00 0.00 38.10 1.89
124 125 1.996292 CACTCACGCTAGCAGCTAAA 58.004 50.000 16.45 0.00 39.60 1.85
125 126 0.458543 GCACTCACGCTAGCAGCTAA 60.459 55.000 16.45 0.00 39.60 3.09
240 241 1.820519 CAATCCCAAGTGGTGTGATGG 59.179 52.381 0.00 0.00 34.77 3.51
344 345 7.510675 AGAAAGGTCTACCAAAGATAATGGA 57.489 36.000 1.26 0.00 41.28 3.41
373 374 4.637483 ATCTATTTTGGCATTGACGGTG 57.363 40.909 0.00 0.00 0.00 4.94
379 380 9.853555 TGTTACTTACAATCTATTTTGGCATTG 57.146 29.630 0.00 0.00 32.64 2.82
398 399 5.422145 ACTTACACCGACAGTTTGTTACTT 58.578 37.500 0.00 0.00 33.85 2.24
401 402 6.403418 CCAAAACTTACACCGACAGTTTGTTA 60.403 38.462 0.00 0.00 39.34 2.41
409 410 3.263489 TCACCAAAACTTACACCGACA 57.737 42.857 0.00 0.00 0.00 4.35
416 417 6.650807 TCATGAGACTCATCACCAAAACTTAC 59.349 38.462 15.24 0.00 34.28 2.34
488 489 6.939132 TTTGTACGTGGAATCCTTTAACAA 57.061 33.333 0.00 4.02 0.00 2.83
489 490 6.938030 AGATTTGTACGTGGAATCCTTTAACA 59.062 34.615 0.00 0.00 31.70 2.41
579 580 0.326618 GGGATCTTGGAGGGAGGTGA 60.327 60.000 0.00 0.00 0.00 4.02
600 601 1.726533 GAGAGGCCGGTTACGAGAGG 61.727 65.000 1.90 0.00 44.60 3.69
627 628 1.447489 GAGGAGAGACCGACGACGA 60.447 63.158 9.28 0.00 44.74 4.20
629 630 2.114051 GGGAGGAGAGACCGACGAC 61.114 68.421 0.00 0.00 44.74 4.34
631 632 2.829458 GGGGAGGAGAGACCGACG 60.829 72.222 0.00 0.00 44.74 5.12
633 634 2.944954 TGGGGGAGGAGAGACCGA 60.945 66.667 0.00 0.00 44.74 4.69
663 664 3.213402 GGAGAGGAGAGGCCGACG 61.213 72.222 0.00 0.00 43.43 5.12
664 665 1.826487 GAGGAGAGGAGAGGCCGAC 60.826 68.421 0.00 0.00 43.43 4.79
665 666 1.990160 GAGAGGAGAGGAGAGGCCGA 61.990 65.000 0.00 0.00 43.43 5.54
683 685 1.982395 ATGGGAGAAGACGCGGTGA 60.982 57.895 12.47 0.00 0.00 4.02
688 690 2.514824 GGCCATGGGAGAAGACGC 60.515 66.667 15.13 0.00 0.00 5.19
712 714 2.283604 GCCCGGGTGGTGGATTTT 60.284 61.111 24.63 0.00 36.04 1.82
728 730 5.915196 GCCTAAAATATTGATCTTTGGACGC 59.085 40.000 0.00 0.00 0.00 5.19
798 800 3.436243 AGAGAGAGGGAGAAAACGTGAT 58.564 45.455 0.00 0.00 0.00 3.06
827 829 2.355197 CACTGAAGCGAGAGAGAGAGA 58.645 52.381 0.00 0.00 0.00 3.10
830 832 0.810648 AGCACTGAAGCGAGAGAGAG 59.189 55.000 0.00 0.00 40.15 3.20
831 833 1.740585 GTAGCACTGAAGCGAGAGAGA 59.259 52.381 0.00 0.00 40.15 3.10
832 834 1.742831 AGTAGCACTGAAGCGAGAGAG 59.257 52.381 0.00 0.00 40.15 3.20
833 835 1.827681 AGTAGCACTGAAGCGAGAGA 58.172 50.000 0.00 0.00 40.15 3.10
834 836 2.537931 CGTAGTAGCACTGAAGCGAGAG 60.538 54.545 0.00 0.00 40.15 3.20
835 837 1.397343 CGTAGTAGCACTGAAGCGAGA 59.603 52.381 0.00 0.00 40.15 4.04
836 838 1.532090 CCGTAGTAGCACTGAAGCGAG 60.532 57.143 0.00 0.00 40.15 5.03
837 839 0.450583 CCGTAGTAGCACTGAAGCGA 59.549 55.000 0.00 0.00 40.15 4.93
838 840 1.140407 GCCGTAGTAGCACTGAAGCG 61.140 60.000 0.00 0.00 40.15 4.68
839 841 1.140407 CGCCGTAGTAGCACTGAAGC 61.140 60.000 0.00 0.00 0.00 3.86
840 842 0.525668 CCGCCGTAGTAGCACTGAAG 60.526 60.000 0.00 0.00 0.00 3.02
841 843 1.246056 ACCGCCGTAGTAGCACTGAA 61.246 55.000 0.00 0.00 0.00 3.02
842 844 1.676635 ACCGCCGTAGTAGCACTGA 60.677 57.895 0.00 0.00 0.00 3.41
843 845 1.516386 CACCGCCGTAGTAGCACTG 60.516 63.158 0.00 0.00 0.00 3.66
844 846 2.707849 CCACCGCCGTAGTAGCACT 61.708 63.158 0.00 0.00 0.00 4.40
868 870 0.036765 TTATGTGTGTCTCCGGTGCC 60.037 55.000 0.00 0.00 0.00 5.01
870 872 7.207383 TCTTATTATTATGTGTGTCTCCGGTG 58.793 38.462 0.00 0.00 0.00 4.94
871 873 7.356089 TCTTATTATTATGTGTGTCTCCGGT 57.644 36.000 0.00 0.00 0.00 5.28
891 893 8.660295 TGTAGTTCCCATACTTCTTCTTCTTA 57.340 34.615 0.00 0.00 0.00 2.10
904 906 2.241176 CCCTGCCTTTGTAGTTCCCATA 59.759 50.000 0.00 0.00 0.00 2.74
913 915 2.349755 GGACGCCCTGCCTTTGTA 59.650 61.111 0.00 0.00 0.00 2.41
959 1446 4.485834 AATACGACGCGCGAGGCA 62.486 61.111 39.36 18.42 44.57 4.75
973 1460 0.271927 ATGGAGGAGCCCCCAGAATA 59.728 55.000 0.00 0.00 35.67 1.75
1016 1503 1.601171 GAGAGCTCTGTGTGGGCAT 59.399 57.895 23.91 0.00 0.00 4.40
1025 1512 3.847602 CCCTGCCGGAGAGCTCTG 61.848 72.222 23.91 8.22 35.77 3.35
1067 1554 1.716826 GGAGAGGAAGACGACGCGAT 61.717 60.000 15.93 0.00 0.00 4.58
1153 1640 2.434884 CGAAGCTCACATGCCGGT 60.435 61.111 1.90 0.00 0.00 5.28
1233 1720 0.107654 ACCTAACAGGGCGAATCAGC 60.108 55.000 0.00 0.00 40.58 4.26
1298 1785 4.191950 AATGGCGCGGGCAATTCG 62.192 61.111 26.61 0.00 38.45 3.34
1307 1794 2.792290 CGACACTGAGAATGGCGCG 61.792 63.158 0.00 0.00 42.62 6.86
1319 1806 3.243336 GAACGAGCTAACAATCGACACT 58.757 45.455 1.13 0.00 41.40 3.55
1349 1836 1.083806 CGCTGTAAGGATTGAGCGCA 61.084 55.000 11.47 0.00 46.32 6.09
1356 1843 2.622436 GCTCTGTTCGCTGTAAGGATT 58.378 47.619 0.00 0.00 0.00 3.01
1361 1848 0.732880 GCTCGCTCTGTTCGCTGTAA 60.733 55.000 0.00 0.00 0.00 2.41
1381 1868 1.478510 GCTGGTAGCAGCTCAGAGTTA 59.521 52.381 33.89 0.00 44.31 2.24
1415 1902 4.328983 AGTTGCAAATCGGTCGTACTAATG 59.671 41.667 0.00 0.00 0.00 1.90
1416 1903 4.501071 AGTTGCAAATCGGTCGTACTAAT 58.499 39.130 0.00 0.00 0.00 1.73
1417 1904 3.916761 AGTTGCAAATCGGTCGTACTAA 58.083 40.909 0.00 0.00 0.00 2.24
1418 1905 3.581024 AGTTGCAAATCGGTCGTACTA 57.419 42.857 0.00 0.00 0.00 1.82
1759 5563 1.283029 CCATCAAGAAGGAGAAGGCCA 59.717 52.381 5.01 0.00 0.00 5.36
1859 5723 0.103208 GAGGCATCGTTGTCCTCGAT 59.897 55.000 16.12 0.00 46.70 3.59
2215 6282 2.126580 GTCGTCCTCGTCCCGTTG 60.127 66.667 0.00 0.00 38.33 4.10
2684 6890 0.736325 GCGTACATGCTGTTCGAGGT 60.736 55.000 15.52 0.00 42.49 3.85
2793 7018 2.485835 CCGACGAACCTCTCCTCTCTAT 60.486 54.545 0.00 0.00 0.00 1.98
2824 7055 1.752683 GCCGAACCTCTCTGTCTCTA 58.247 55.000 0.00 0.00 0.00 2.43
2851 7099 2.014574 GCCGTGCTCTCTGTCTCTCTA 61.015 57.143 0.00 0.00 0.00 2.43
2897 7244 1.260825 GCTATAAAAAGCGTCGCCCTC 59.739 52.381 14.86 0.00 31.76 4.30
2929 7356 2.741092 CCGCCCTGTGTACACACT 59.259 61.111 24.62 0.00 46.55 3.55
3196 7645 1.064060 CCTAGAAGCCCAATTTTCGCG 59.936 52.381 0.00 0.00 0.00 5.87
3299 7753 2.159517 CGAAGTAAGCCAAGGCATTGTC 60.160 50.000 14.40 0.00 44.88 3.18
3321 7775 6.844917 ACTACACCCTGGTAATAAGAGCTAAT 59.155 38.462 0.00 0.00 0.00 1.73
3325 7779 4.161754 ACACTACACCCTGGTAATAAGAGC 59.838 45.833 0.00 0.00 0.00 4.09
3326 7780 5.934402 ACACTACACCCTGGTAATAAGAG 57.066 43.478 0.00 0.00 0.00 2.85
3356 7810 5.105106 TGCTTGGAGATCGTGGAATAAACTA 60.105 40.000 0.00 0.00 0.00 2.24
3395 7849 2.781911 GCTACTAAGCCCAAGCACC 58.218 57.895 0.00 0.00 43.40 5.01
3482 7955 4.362677 TCCTATCCAAGAAGCCACTAAGT 58.637 43.478 0.00 0.00 0.00 2.24
3502 7975 2.508361 CCCAATGGGTGCTTGATCC 58.492 57.895 10.91 0.00 38.25 3.36
3513 7986 1.533711 CTGGTAGAGGCCCCAATGG 59.466 63.158 0.00 0.00 37.09 3.16
3531 8004 4.081972 TGACAGAGAGCTCAGTTGATTACC 60.082 45.833 17.77 0.00 29.15 2.85
3538 8011 3.306641 GGTTGATGACAGAGAGCTCAGTT 60.307 47.826 17.77 0.00 29.15 3.16
3541 8014 2.250924 TGGTTGATGACAGAGAGCTCA 58.749 47.619 17.77 0.00 0.00 4.26
3566 8039 4.699637 TGTTGACAAAGGAGTATCGTTGT 58.300 39.130 0.00 0.00 43.22 3.32
3569 8042 6.231211 AGAAATGTTGACAAAGGAGTATCGT 58.769 36.000 0.00 0.00 34.37 3.73
3571 8044 7.809806 CCAAAGAAATGTTGACAAAGGAGTATC 59.190 37.037 0.00 0.00 0.00 2.24
3572 8045 7.287696 ACCAAAGAAATGTTGACAAAGGAGTAT 59.712 33.333 0.00 0.00 0.00 2.12
3580 8053 7.872993 TGTTAACAACCAAAGAAATGTTGACAA 59.127 29.630 5.64 0.00 44.20 3.18
3583 8056 9.442047 AAATGTTAACAACCAAAGAAATGTTGA 57.558 25.926 13.23 0.00 41.38 3.18
3595 8068 9.126151 TGATTACTGAAGAAATGTTAACAACCA 57.874 29.630 13.23 4.01 0.00 3.67
3689 8164 4.647291 ATCGAACGACAACTAAAGCAAG 57.353 40.909 0.00 0.00 0.00 4.01
3716 8191 7.350744 TGCAAGCACAATATAGGATTGAAAT 57.649 32.000 4.36 0.00 33.51 2.17
3725 8200 1.265095 CGCCCTGCAAGCACAATATAG 59.735 52.381 8.92 0.00 0.00 1.31
3762 8237 2.092646 AGCAAGACCTACAACACCACAA 60.093 45.455 0.00 0.00 0.00 3.33
3763 8238 1.488812 AGCAAGACCTACAACACCACA 59.511 47.619 0.00 0.00 0.00 4.17
3764 8239 1.873591 CAGCAAGACCTACAACACCAC 59.126 52.381 0.00 0.00 0.00 4.16
3765 8240 1.488812 ACAGCAAGACCTACAACACCA 59.511 47.619 0.00 0.00 0.00 4.17
3766 8241 2.256117 ACAGCAAGACCTACAACACC 57.744 50.000 0.00 0.00 0.00 4.16
3767 8242 3.991367 ACTACAGCAAGACCTACAACAC 58.009 45.455 0.00 0.00 0.00 3.32
3768 8243 4.682778 AACTACAGCAAGACCTACAACA 57.317 40.909 0.00 0.00 0.00 3.33
3769 8244 6.927381 TCTAAAACTACAGCAAGACCTACAAC 59.073 38.462 0.00 0.00 0.00 3.32
3770 8245 7.058023 TCTAAAACTACAGCAAGACCTACAA 57.942 36.000 0.00 0.00 0.00 2.41
3771 8246 6.295123 CCTCTAAAACTACAGCAAGACCTACA 60.295 42.308 0.00 0.00 0.00 2.74
3772 8247 6.100668 CCTCTAAAACTACAGCAAGACCTAC 58.899 44.000 0.00 0.00 0.00 3.18
3773 8248 5.778750 ACCTCTAAAACTACAGCAAGACCTA 59.221 40.000 0.00 0.00 0.00 3.08
3774 8249 4.593634 ACCTCTAAAACTACAGCAAGACCT 59.406 41.667 0.00 0.00 0.00 3.85
3775 8250 4.895961 ACCTCTAAAACTACAGCAAGACC 58.104 43.478 0.00 0.00 0.00 3.85
3776 8251 5.785243 AGACCTCTAAAACTACAGCAAGAC 58.215 41.667 0.00 0.00 0.00 3.01
3777 8252 6.420913 AAGACCTCTAAAACTACAGCAAGA 57.579 37.500 0.00 0.00 0.00 3.02
3778 8253 7.117956 GGTTAAGACCTCTAAAACTACAGCAAG 59.882 40.741 0.00 0.00 42.99 4.01
3779 8254 6.932960 GGTTAAGACCTCTAAAACTACAGCAA 59.067 38.462 0.00 0.00 42.99 3.91
3780 8255 6.461640 GGTTAAGACCTCTAAAACTACAGCA 58.538 40.000 0.00 0.00 42.99 4.41
3781 8256 5.575995 CGGTTAAGACCTCTAAAACTACAGC 59.424 44.000 0.00 0.00 44.20 4.40
3782 8257 6.917533 TCGGTTAAGACCTCTAAAACTACAG 58.082 40.000 0.00 0.00 44.20 2.74
3810 8285 9.509956 TGCTTGCTACTCCTAATTAACTAAAAA 57.490 29.630 0.00 0.00 0.00 1.94
3811 8286 9.509956 TTGCTTGCTACTCCTAATTAACTAAAA 57.490 29.630 0.00 0.00 0.00 1.52
3812 8287 9.162764 CTTGCTTGCTACTCCTAATTAACTAAA 57.837 33.333 0.00 0.00 0.00 1.85
3813 8288 7.280205 GCTTGCTTGCTACTCCTAATTAACTAA 59.720 37.037 0.00 0.00 0.00 2.24
3814 8289 6.761714 GCTTGCTTGCTACTCCTAATTAACTA 59.238 38.462 0.00 0.00 0.00 2.24
3827 8302 2.416547 TCGAAATCAGCTTGCTTGCTAC 59.583 45.455 3.87 0.00 41.98 3.58
3847 8322 5.297029 GGAATTGGTACCAGAATTGCTACTC 59.703 44.000 18.60 2.07 29.85 2.59
3860 8335 5.877564 CAGAAGAGAAGAAGGAATTGGTACC 59.122 44.000 4.43 4.43 0.00 3.34
3897 8372 4.588528 AGAAGAGAACAAGAGAGAGCAAGT 59.411 41.667 0.00 0.00 0.00 3.16
3966 8441 7.609918 GGGTAAAAATGCAATTGTCCCTAATTT 59.390 33.333 7.40 3.29 36.10 1.82
3967 8442 7.109501 GGGTAAAAATGCAATTGTCCCTAATT 58.890 34.615 7.40 0.00 36.10 1.40
3968 8443 6.352651 GGGGTAAAAATGCAATTGTCCCTAAT 60.353 38.462 16.31 0.00 36.10 1.73
3969 8444 5.046231 GGGGTAAAAATGCAATTGTCCCTAA 60.046 40.000 16.31 0.00 36.10 2.69
3970 8445 4.468153 GGGGTAAAAATGCAATTGTCCCTA 59.532 41.667 16.31 0.00 36.10 3.53
3971 8446 3.263170 GGGGTAAAAATGCAATTGTCCCT 59.737 43.478 16.31 0.00 36.10 4.20
3972 8447 3.263170 AGGGGTAAAAATGCAATTGTCCC 59.737 43.478 7.40 11.28 36.10 4.46
3973 8448 4.551702 AGGGGTAAAAATGCAATTGTCC 57.448 40.909 7.40 0.00 36.10 4.02
3974 8449 6.280855 ACTAGGGGTAAAAATGCAATTGTC 57.719 37.500 7.40 0.07 36.10 3.18
3975 8450 6.463360 CAACTAGGGGTAAAAATGCAATTGT 58.537 36.000 7.40 0.00 36.10 2.71
3976 8451 5.874261 CCAACTAGGGGTAAAAATGCAATTG 59.126 40.000 0.00 0.00 36.10 2.32
3977 8452 5.546110 ACCAACTAGGGGTAAAAATGCAATT 59.454 36.000 6.57 0.00 43.89 2.32
3978 8453 5.090845 ACCAACTAGGGGTAAAAATGCAAT 58.909 37.500 6.57 0.00 43.89 3.56
3979 8454 4.484912 ACCAACTAGGGGTAAAAATGCAA 58.515 39.130 6.57 0.00 43.89 4.08
3980 8455 4.120946 ACCAACTAGGGGTAAAAATGCA 57.879 40.909 6.57 0.00 43.89 3.96
3981 8456 4.081862 GGAACCAACTAGGGGTAAAAATGC 60.082 45.833 8.59 0.00 43.89 3.56
3982 8457 5.330233 AGGAACCAACTAGGGGTAAAAATG 58.670 41.667 8.59 0.00 43.89 2.32
3983 8458 5.610429 AGGAACCAACTAGGGGTAAAAAT 57.390 39.130 8.59 0.00 43.89 1.82
3984 8459 5.222109 GGTAGGAACCAACTAGGGGTAAAAA 60.222 44.000 8.59 0.00 45.98 1.94
3985 8460 4.289410 GGTAGGAACCAACTAGGGGTAAAA 59.711 45.833 8.59 0.00 45.98 1.52
3986 8461 3.845992 GGTAGGAACCAACTAGGGGTAAA 59.154 47.826 8.59 0.00 45.98 2.01
3987 8462 3.453868 GGTAGGAACCAACTAGGGGTAA 58.546 50.000 8.59 0.00 45.98 2.85
3988 8463 3.120468 GGTAGGAACCAACTAGGGGTA 57.880 52.381 8.59 0.00 45.98 3.69
3989 8464 1.962558 GGTAGGAACCAACTAGGGGT 58.037 55.000 2.70 2.70 45.98 4.95
4013 8488 3.855895 GCTCGAAAAGTAAGGGCAAAACC 60.856 47.826 0.00 0.00 37.93 3.27
4014 8489 3.004419 AGCTCGAAAAGTAAGGGCAAAAC 59.996 43.478 0.00 0.00 0.00 2.43
4015 8490 3.219281 AGCTCGAAAAGTAAGGGCAAAA 58.781 40.909 0.00 0.00 0.00 2.44
4016 8491 2.858745 AGCTCGAAAAGTAAGGGCAAA 58.141 42.857 0.00 0.00 0.00 3.68
4017 8492 2.552315 CAAGCTCGAAAAGTAAGGGCAA 59.448 45.455 0.00 0.00 0.00 4.52
4018 8493 2.151202 CAAGCTCGAAAAGTAAGGGCA 58.849 47.619 0.00 0.00 0.00 5.36
4019 8494 1.135660 GCAAGCTCGAAAAGTAAGGGC 60.136 52.381 0.00 0.00 0.00 5.19
4020 8495 2.416893 GAGCAAGCTCGAAAAGTAAGGG 59.583 50.000 6.28 0.00 33.06 3.95
4021 8496 3.067106 TGAGCAAGCTCGAAAAGTAAGG 58.933 45.455 16.45 0.00 45.48 2.69
4022 8497 3.743396 ACTGAGCAAGCTCGAAAAGTAAG 59.257 43.478 16.45 8.52 45.48 2.34
4023 8498 3.728845 ACTGAGCAAGCTCGAAAAGTAA 58.271 40.909 16.45 0.00 45.48 2.24
4024 8499 3.386768 ACTGAGCAAGCTCGAAAAGTA 57.613 42.857 16.45 0.00 45.48 2.24
4025 8500 2.246719 ACTGAGCAAGCTCGAAAAGT 57.753 45.000 16.45 11.37 45.48 2.66
4026 8501 3.615849 AAACTGAGCAAGCTCGAAAAG 57.384 42.857 16.45 10.78 45.48 2.27
4027 8502 3.694734 CAAAACTGAGCAAGCTCGAAAA 58.305 40.909 16.45 0.00 45.48 2.29
4028 8503 2.541588 GCAAAACTGAGCAAGCTCGAAA 60.542 45.455 16.45 0.00 45.48 3.46
4029 8504 1.002468 GCAAAACTGAGCAAGCTCGAA 60.002 47.619 16.45 0.09 45.48 3.71
4030 8505 0.588252 GCAAAACTGAGCAAGCTCGA 59.412 50.000 16.45 5.93 45.48 4.04
4031 8506 0.386478 GGCAAAACTGAGCAAGCTCG 60.386 55.000 16.45 13.26 45.48 5.03
4032 8507 0.038801 GGGCAAAACTGAGCAAGCTC 60.039 55.000 14.90 14.90 43.01 4.09
4033 8508 0.468771 AGGGCAAAACTGAGCAAGCT 60.469 50.000 0.00 0.00 0.00 3.74
4034 8509 0.390492 AAGGGCAAAACTGAGCAAGC 59.610 50.000 0.00 0.00 0.00 4.01
4035 8510 2.887152 AGTAAGGGCAAAACTGAGCAAG 59.113 45.455 0.00 0.00 0.00 4.01
4036 8511 2.944129 AGTAAGGGCAAAACTGAGCAA 58.056 42.857 0.00 0.00 0.00 3.91
4037 8512 2.656947 AGTAAGGGCAAAACTGAGCA 57.343 45.000 0.00 0.00 0.00 4.26
4038 8513 4.322080 AAAAGTAAGGGCAAAACTGAGC 57.678 40.909 0.00 0.00 0.00 4.26
4039 8514 5.289595 GGAAAAAGTAAGGGCAAAACTGAG 58.710 41.667 0.00 0.00 0.00 3.35
4040 8515 4.202070 CGGAAAAAGTAAGGGCAAAACTGA 60.202 41.667 0.00 0.00 0.00 3.41
4041 8516 4.048504 CGGAAAAAGTAAGGGCAAAACTG 58.951 43.478 0.00 0.00 0.00 3.16
4042 8517 3.702548 ACGGAAAAAGTAAGGGCAAAACT 59.297 39.130 0.00 0.00 0.00 2.66
4043 8518 4.046462 GACGGAAAAAGTAAGGGCAAAAC 58.954 43.478 0.00 0.00 0.00 2.43
4044 8519 3.700038 TGACGGAAAAAGTAAGGGCAAAA 59.300 39.130 0.00 0.00 0.00 2.44
4045 8520 3.288964 TGACGGAAAAAGTAAGGGCAAA 58.711 40.909 0.00 0.00 0.00 3.68
4046 8521 2.933573 TGACGGAAAAAGTAAGGGCAA 58.066 42.857 0.00 0.00 0.00 4.52
4047 8522 2.642154 TGACGGAAAAAGTAAGGGCA 57.358 45.000 0.00 0.00 0.00 5.36
4048 8523 2.163613 CCATGACGGAAAAAGTAAGGGC 59.836 50.000 0.00 0.00 36.56 5.19
4049 8524 3.418047 ACCATGACGGAAAAAGTAAGGG 58.582 45.455 0.00 0.00 38.63 3.95
4050 8525 3.439129 GGACCATGACGGAAAAAGTAAGG 59.561 47.826 0.00 0.00 38.63 2.69
4051 8526 3.439129 GGGACCATGACGGAAAAAGTAAG 59.561 47.826 0.00 0.00 38.63 2.34
4052 8527 3.073356 AGGGACCATGACGGAAAAAGTAA 59.927 43.478 0.00 0.00 38.63 2.24
4053 8528 2.640826 AGGGACCATGACGGAAAAAGTA 59.359 45.455 0.00 0.00 38.63 2.24
4054 8529 1.423921 AGGGACCATGACGGAAAAAGT 59.576 47.619 0.00 0.00 38.63 2.66
4055 8530 2.084546 GAGGGACCATGACGGAAAAAG 58.915 52.381 0.00 0.00 38.63 2.27
4056 8531 1.609580 CGAGGGACCATGACGGAAAAA 60.610 52.381 0.00 0.00 38.63 1.94
4057 8532 0.036765 CGAGGGACCATGACGGAAAA 60.037 55.000 0.00 0.00 38.63 2.29
4058 8533 0.901114 TCGAGGGACCATGACGGAAA 60.901 55.000 0.00 0.00 38.63 3.13
4059 8534 0.901114 TTCGAGGGACCATGACGGAA 60.901 55.000 0.00 0.00 38.63 4.30
4060 8535 0.686441 ATTCGAGGGACCATGACGGA 60.686 55.000 0.00 0.00 38.63 4.69
4061 8536 0.530650 CATTCGAGGGACCATGACGG 60.531 60.000 0.00 0.00 42.50 4.79
4062 8537 1.154205 GCATTCGAGGGACCATGACG 61.154 60.000 0.00 0.00 0.00 4.35
4063 8538 0.815615 GGCATTCGAGGGACCATGAC 60.816 60.000 0.00 0.00 0.00 3.06
4064 8539 1.526887 GGCATTCGAGGGACCATGA 59.473 57.895 0.00 0.00 0.00 3.07
4065 8540 1.526917 GGGCATTCGAGGGACCATG 60.527 63.158 5.47 0.00 0.00 3.66
4066 8541 1.281925 AAGGGCATTCGAGGGACCAT 61.282 55.000 12.29 0.00 0.00 3.55
4067 8542 1.497309 AAAGGGCATTCGAGGGACCA 61.497 55.000 12.29 0.00 0.00 4.02
4068 8543 1.032114 CAAAGGGCATTCGAGGGACC 61.032 60.000 2.15 2.15 0.00 4.46
4069 8544 0.035439 TCAAAGGGCATTCGAGGGAC 60.035 55.000 0.00 0.00 0.00 4.46
4070 8545 0.035439 GTCAAAGGGCATTCGAGGGA 60.035 55.000 0.00 0.00 0.00 4.20
4071 8546 0.035056 AGTCAAAGGGCATTCGAGGG 60.035 55.000 0.00 0.00 0.00 4.30
4072 8547 1.089920 CAGTCAAAGGGCATTCGAGG 58.910 55.000 0.00 0.00 0.00 4.63
4073 8548 1.813513 ACAGTCAAAGGGCATTCGAG 58.186 50.000 0.00 0.00 0.00 4.04
4074 8549 2.270352 AACAGTCAAAGGGCATTCGA 57.730 45.000 0.00 0.00 0.00 3.71
4075 8550 2.293122 TCAAACAGTCAAAGGGCATTCG 59.707 45.455 0.00 0.00 0.00 3.34
4076 8551 3.552890 GGTCAAACAGTCAAAGGGCATTC 60.553 47.826 0.00 0.00 0.00 2.67
4077 8552 2.365293 GGTCAAACAGTCAAAGGGCATT 59.635 45.455 0.00 0.00 0.00 3.56
4078 8553 1.963515 GGTCAAACAGTCAAAGGGCAT 59.036 47.619 0.00 0.00 0.00 4.40
4079 8554 1.341482 TGGTCAAACAGTCAAAGGGCA 60.341 47.619 0.00 0.00 0.00 5.36
4080 8555 1.398692 TGGTCAAACAGTCAAAGGGC 58.601 50.000 0.00 0.00 0.00 5.19
4081 8556 4.081697 AGTTTTGGTCAAACAGTCAAAGGG 60.082 41.667 0.00 0.00 46.55 3.95
4082 8557 5.072040 AGTTTTGGTCAAACAGTCAAAGG 57.928 39.130 0.00 0.00 46.55 3.11
4083 8558 6.644592 TCAAAGTTTTGGTCAAACAGTCAAAG 59.355 34.615 4.89 0.00 46.55 2.77
4084 8559 6.516718 TCAAAGTTTTGGTCAAACAGTCAAA 58.483 32.000 4.89 0.00 46.55 2.69
4085 8560 6.090483 TCAAAGTTTTGGTCAAACAGTCAA 57.910 33.333 4.89 0.00 46.55 3.18
4086 8561 5.713792 TCAAAGTTTTGGTCAAACAGTCA 57.286 34.783 4.89 0.00 46.55 3.41
4087 8562 7.414814 TTTTCAAAGTTTTGGTCAAACAGTC 57.585 32.000 4.89 0.00 46.55 3.51
4088 8563 7.977789 ATTTTCAAAGTTTTGGTCAAACAGT 57.022 28.000 4.89 0.00 46.55 3.55
4089 8564 8.720562 AGAATTTTCAAAGTTTTGGTCAAACAG 58.279 29.630 4.89 0.00 46.55 3.16
4090 8565 8.614469 AGAATTTTCAAAGTTTTGGTCAAACA 57.386 26.923 4.89 0.00 46.55 2.83
4094 8569 9.936759 AGTTAAGAATTTTCAAAGTTTTGGTCA 57.063 25.926 4.89 0.00 38.66 4.02
4163 8638 9.503427 GCACATAAAGGTAATGTTTATCTGAAC 57.497 33.333 0.00 0.00 35.39 3.18
4164 8639 9.237187 TGCACATAAAGGTAATGTTTATCTGAA 57.763 29.630 0.00 0.00 35.39 3.02
4165 8640 8.800370 TGCACATAAAGGTAATGTTTATCTGA 57.200 30.769 0.00 0.00 35.39 3.27
4173 8648 9.970395 CAAATGATATGCACATAAAGGTAATGT 57.030 29.630 0.00 0.00 38.08 2.71
4174 8649 8.918658 GCAAATGATATGCACATAAAGGTAATG 58.081 33.333 0.00 0.00 43.29 1.90
4188 8663 5.190992 TGTCCTGAATGCAAATGATATGC 57.809 39.130 0.00 0.00 44.08 3.14
4189 8664 7.254319 GCTTTTGTCCTGAATGCAAATGATATG 60.254 37.037 0.00 0.00 33.00 1.78
4190 8665 6.759827 GCTTTTGTCCTGAATGCAAATGATAT 59.240 34.615 0.00 0.00 33.00 1.63
4191 8666 6.101332 GCTTTTGTCCTGAATGCAAATGATA 58.899 36.000 0.00 0.00 33.00 2.15
4192 8667 4.933400 GCTTTTGTCCTGAATGCAAATGAT 59.067 37.500 0.00 0.00 33.00 2.45
4193 8668 4.202233 TGCTTTTGTCCTGAATGCAAATGA 60.202 37.500 0.00 0.00 35.20 2.57
4194 8669 4.059511 TGCTTTTGTCCTGAATGCAAATG 58.940 39.130 0.00 0.00 35.20 2.32
4195 8670 4.060205 GTGCTTTTGTCCTGAATGCAAAT 58.940 39.130 0.00 0.00 38.40 2.32
4196 8671 3.456280 GTGCTTTTGTCCTGAATGCAAA 58.544 40.909 0.00 0.00 38.40 3.68
4197 8672 2.224018 GGTGCTTTTGTCCTGAATGCAA 60.224 45.455 0.00 0.00 38.40 4.08
4198 8673 1.340889 GGTGCTTTTGTCCTGAATGCA 59.659 47.619 0.00 0.00 35.59 3.96
4199 8674 1.337167 GGGTGCTTTTGTCCTGAATGC 60.337 52.381 0.00 0.00 0.00 3.56
4200 8675 2.242043 AGGGTGCTTTTGTCCTGAATG 58.758 47.619 0.00 0.00 0.00 2.67
4201 8676 2.683211 AGGGTGCTTTTGTCCTGAAT 57.317 45.000 0.00 0.00 0.00 2.57
4202 8677 2.452600 AAGGGTGCTTTTGTCCTGAA 57.547 45.000 0.00 0.00 0.00 3.02
4203 8678 2.452600 AAAGGGTGCTTTTGTCCTGA 57.547 45.000 0.00 0.00 0.00 3.86
4204 8679 4.099419 AGTTTAAAGGGTGCTTTTGTCCTG 59.901 41.667 0.00 0.00 0.00 3.86
4205 8680 4.286707 AGTTTAAAGGGTGCTTTTGTCCT 58.713 39.130 0.00 0.00 0.00 3.85
4206 8681 4.665833 AGTTTAAAGGGTGCTTTTGTCC 57.334 40.909 0.00 0.00 0.00 4.02
4207 8682 5.301045 AGGTAGTTTAAAGGGTGCTTTTGTC 59.699 40.000 0.00 0.00 0.00 3.18
4208 8683 5.068591 CAGGTAGTTTAAAGGGTGCTTTTGT 59.931 40.000 0.00 0.00 0.00 2.83
4209 8684 5.300792 TCAGGTAGTTTAAAGGGTGCTTTTG 59.699 40.000 0.00 0.00 0.00 2.44
4210 8685 5.451354 TCAGGTAGTTTAAAGGGTGCTTTT 58.549 37.500 0.00 0.00 0.00 2.27
4211 8686 5.056553 TCAGGTAGTTTAAAGGGTGCTTT 57.943 39.130 0.00 0.00 0.00 3.51
4212 8687 4.506802 CCTCAGGTAGTTTAAAGGGTGCTT 60.507 45.833 0.00 0.00 0.00 3.91
4213 8688 3.009143 CCTCAGGTAGTTTAAAGGGTGCT 59.991 47.826 0.00 0.00 0.00 4.40
4214 8689 3.244805 ACCTCAGGTAGTTTAAAGGGTGC 60.245 47.826 0.00 0.00 32.11 5.01
4215 8690 4.635699 ACCTCAGGTAGTTTAAAGGGTG 57.364 45.455 0.00 0.00 32.11 4.61
4216 8691 6.964876 ATTACCTCAGGTAGTTTAAAGGGT 57.035 37.500 3.09 0.00 39.52 4.34
4217 8692 9.916360 ATTAATTACCTCAGGTAGTTTAAAGGG 57.084 33.333 16.30 0.00 39.52 3.95
4289 8764 9.800433 ACATTCGCATGTAATTTTTATTCATGA 57.200 25.926 0.00 0.00 42.24 3.07
4297 8772 9.022915 CATCACATACATTCGCATGTAATTTTT 57.977 29.630 11.87 0.00 46.76 1.94
4298 8773 8.190122 ACATCACATACATTCGCATGTAATTTT 58.810 29.630 11.87 0.00 46.76 1.82
4299 8774 7.706159 ACATCACATACATTCGCATGTAATTT 58.294 30.769 11.87 0.00 46.76 1.82
4300 8775 7.263100 ACATCACATACATTCGCATGTAATT 57.737 32.000 11.87 0.00 46.76 1.40
4301 8776 6.866010 ACATCACATACATTCGCATGTAAT 57.134 33.333 11.87 1.22 46.76 1.89
4302 8777 6.676237 AACATCACATACATTCGCATGTAA 57.324 33.333 11.87 0.00 46.76 2.41
4304 8779 5.565592 AAACATCACATACATTCGCATGT 57.434 34.783 5.87 5.87 46.07 3.21
4305 8780 6.195798 CAGAAAACATCACATACATTCGCATG 59.804 38.462 0.00 0.00 36.34 4.06
4306 8781 6.093909 TCAGAAAACATCACATACATTCGCAT 59.906 34.615 0.00 0.00 0.00 4.73
4307 8782 5.411053 TCAGAAAACATCACATACATTCGCA 59.589 36.000 0.00 0.00 0.00 5.10
4308 8783 5.868257 TCAGAAAACATCACATACATTCGC 58.132 37.500 0.00 0.00 0.00 4.70
4309 8784 7.297391 TGTTCAGAAAACATCACATACATTCG 58.703 34.615 0.00 0.00 0.00 3.34
4326 8801 9.060347 GCAAATAAGATATCTGGATGTTCAGAA 57.940 33.333 5.86 0.00 45.54 3.02
4327 8802 8.212995 TGCAAATAAGATATCTGGATGTTCAGA 58.787 33.333 5.86 0.00 46.32 3.27
4328 8803 8.387190 TGCAAATAAGATATCTGGATGTTCAG 57.613 34.615 5.86 0.00 36.17 3.02
4329 8804 8.929260 ATGCAAATAAGATATCTGGATGTTCA 57.071 30.769 5.86 0.00 0.00 3.18
4341 8816 9.773328 CGAACTCAGAAAAATGCAAATAAGATA 57.227 29.630 0.00 0.00 0.00 1.98
4342 8817 8.299570 ACGAACTCAGAAAAATGCAAATAAGAT 58.700 29.630 0.00 0.00 0.00 2.40
4343 8818 7.648142 ACGAACTCAGAAAAATGCAAATAAGA 58.352 30.769 0.00 0.00 0.00 2.10
4344 8819 7.858052 ACGAACTCAGAAAAATGCAAATAAG 57.142 32.000 0.00 0.00 0.00 1.73
4345 8820 9.554724 GATACGAACTCAGAAAAATGCAAATAA 57.445 29.630 0.00 0.00 0.00 1.40
4346 8821 8.726068 TGATACGAACTCAGAAAAATGCAAATA 58.274 29.630 0.00 0.00 0.00 1.40
4347 8822 7.592938 TGATACGAACTCAGAAAAATGCAAAT 58.407 30.769 0.00 0.00 0.00 2.32
4348 8823 6.964908 TGATACGAACTCAGAAAAATGCAAA 58.035 32.000 0.00 0.00 0.00 3.68
4349 8824 6.552859 TGATACGAACTCAGAAAAATGCAA 57.447 33.333 0.00 0.00 0.00 4.08
4350 8825 6.595326 AGATGATACGAACTCAGAAAAATGCA 59.405 34.615 0.00 0.00 0.00 3.96
4351 8826 7.009568 AGATGATACGAACTCAGAAAAATGC 57.990 36.000 0.00 0.00 0.00 3.56
4352 8827 8.446273 ACAAGATGATACGAACTCAGAAAAATG 58.554 33.333 0.00 0.00 0.00 2.32
4353 8828 8.553459 ACAAGATGATACGAACTCAGAAAAAT 57.447 30.769 0.00 0.00 0.00 1.82
4354 8829 7.962964 ACAAGATGATACGAACTCAGAAAAA 57.037 32.000 0.00 0.00 0.00 1.94
4355 8830 7.962964 AACAAGATGATACGAACTCAGAAAA 57.037 32.000 0.00 0.00 0.00 2.29
4356 8831 9.087424 CATAACAAGATGATACGAACTCAGAAA 57.913 33.333 0.00 0.00 0.00 2.52
4357 8832 8.466798 TCATAACAAGATGATACGAACTCAGAA 58.533 33.333 0.00 0.00 30.75 3.02
4358 8833 7.996385 TCATAACAAGATGATACGAACTCAGA 58.004 34.615 0.00 0.00 30.75 3.27
4359 8834 8.634475 TTCATAACAAGATGATACGAACTCAG 57.366 34.615 0.00 0.00 35.77 3.35
4360 8835 9.034544 CATTCATAACAAGATGATACGAACTCA 57.965 33.333 0.00 0.00 35.77 3.41
4361 8836 9.035607 ACATTCATAACAAGATGATACGAACTC 57.964 33.333 0.00 0.00 35.77 3.01
4362 8837 8.948631 ACATTCATAACAAGATGATACGAACT 57.051 30.769 0.00 0.00 35.77 3.01
4363 8838 9.638300 GAACATTCATAACAAGATGATACGAAC 57.362 33.333 0.00 0.00 35.77 3.95
4364 8839 9.599866 AGAACATTCATAACAAGATGATACGAA 57.400 29.630 0.00 0.00 35.77 3.85
4369 8844 9.599866 TCGTTAGAACATTCATAACAAGATGAT 57.400 29.630 11.26 0.00 35.77 2.45
4370 8845 8.869897 GTCGTTAGAACATTCATAACAAGATGA 58.130 33.333 11.26 0.00 33.96 2.92
4371 8846 8.873830 AGTCGTTAGAACATTCATAACAAGATG 58.126 33.333 11.26 0.00 31.25 2.90
4372 8847 9.436957 AAGTCGTTAGAACATTCATAACAAGAT 57.563 29.630 11.26 0.00 31.25 2.40
4373 8848 8.827177 AAGTCGTTAGAACATTCATAACAAGA 57.173 30.769 11.26 0.00 31.25 3.02
4374 8849 9.318041 CAAAGTCGTTAGAACATTCATAACAAG 57.682 33.333 11.26 0.00 31.25 3.16
4375 8850 9.047371 TCAAAGTCGTTAGAACATTCATAACAA 57.953 29.630 11.26 0.00 31.25 2.83
4376 8851 8.492748 GTCAAAGTCGTTAGAACATTCATAACA 58.507 33.333 11.26 1.95 31.25 2.41
4377 8852 7.955864 GGTCAAAGTCGTTAGAACATTCATAAC 59.044 37.037 0.00 0.62 0.00 1.89
4378 8853 7.658167 TGGTCAAAGTCGTTAGAACATTCATAA 59.342 33.333 0.00 0.00 0.00 1.90
4379 8854 7.156000 TGGTCAAAGTCGTTAGAACATTCATA 58.844 34.615 0.00 0.00 0.00 2.15
4380 8855 5.995282 TGGTCAAAGTCGTTAGAACATTCAT 59.005 36.000 0.00 0.00 0.00 2.57
4381 8856 5.361427 TGGTCAAAGTCGTTAGAACATTCA 58.639 37.500 0.00 0.00 0.00 2.57
4382 8857 5.917541 TGGTCAAAGTCGTTAGAACATTC 57.082 39.130 0.00 0.00 0.00 2.67
4383 8858 6.877611 AATGGTCAAAGTCGTTAGAACATT 57.122 33.333 0.00 0.00 41.98 2.71
4384 8859 8.561738 AATAATGGTCAAAGTCGTTAGAACAT 57.438 30.769 0.00 0.00 39.93 2.71
4385 8860 7.972832 AATAATGGTCAAAGTCGTTAGAACA 57.027 32.000 0.00 0.00 31.48 3.18
4386 8861 7.749126 CCAAATAATGGTCAAAGTCGTTAGAAC 59.251 37.037 0.00 0.00 44.85 3.01
4387 8862 7.812648 CCAAATAATGGTCAAAGTCGTTAGAA 58.187 34.615 0.00 0.00 44.85 2.10
4388 8863 7.372451 CCAAATAATGGTCAAAGTCGTTAGA 57.628 36.000 0.00 0.00 44.85 2.10
4402 8877 9.927668 ACTTGTTATGAAGTTTCCAAATAATGG 57.072 29.630 0.00 0.00 40.88 3.16
4408 8883 9.959749 GTATCAACTTGTTATGAAGTTTCCAAA 57.040 29.630 0.00 0.00 42.33 3.28
4409 8884 8.286800 CGTATCAACTTGTTATGAAGTTTCCAA 58.713 33.333 0.00 0.00 42.33 3.53
4410 8885 7.658167 TCGTATCAACTTGTTATGAAGTTTCCA 59.342 33.333 0.00 0.00 42.33 3.53
4411 8886 8.025243 TCGTATCAACTTGTTATGAAGTTTCC 57.975 34.615 0.00 0.00 42.33 3.13
4412 8887 9.314501 GTTCGTATCAACTTGTTATGAAGTTTC 57.685 33.333 12.09 1.99 42.33 2.78
4413 8888 9.052759 AGTTCGTATCAACTTGTTATGAAGTTT 57.947 29.630 12.09 3.17 42.33 2.66
4414 8889 8.603242 AGTTCGTATCAACTTGTTATGAAGTT 57.397 30.769 12.09 0.00 45.17 2.66
4415 8890 7.870954 TGAGTTCGTATCAACTTGTTATGAAGT 59.129 33.333 15.86 15.86 36.71 3.01
4416 8891 8.239681 TGAGTTCGTATCAACTTGTTATGAAG 57.760 34.615 12.09 0.00 36.71 3.02
4417 8892 8.085909 TCTGAGTTCGTATCAACTTGTTATGAA 58.914 33.333 9.20 9.20 36.71 2.57
4418 8893 7.599171 TCTGAGTTCGTATCAACTTGTTATGA 58.401 34.615 0.00 0.00 36.71 2.15
4419 8894 7.812309 TCTGAGTTCGTATCAACTTGTTATG 57.188 36.000 0.00 0.00 36.71 1.90
4420 8895 8.827177 TTTCTGAGTTCGTATCAACTTGTTAT 57.173 30.769 0.00 0.00 36.71 1.89
4421 8896 8.651391 TTTTCTGAGTTCGTATCAACTTGTTA 57.349 30.769 0.00 0.00 36.71 2.41
4422 8897 7.548196 TTTTCTGAGTTCGTATCAACTTGTT 57.452 32.000 0.00 0.00 36.71 2.83
4423 8898 7.548196 TTTTTCTGAGTTCGTATCAACTTGT 57.452 32.000 0.00 0.00 36.71 3.16
4424 8899 7.059945 GCATTTTTCTGAGTTCGTATCAACTTG 59.940 37.037 0.00 0.00 36.71 3.16
4425 8900 7.078228 GCATTTTTCTGAGTTCGTATCAACTT 58.922 34.615 0.00 0.00 36.71 2.66
4426 8901 6.204688 TGCATTTTTCTGAGTTCGTATCAACT 59.795 34.615 0.00 0.00 39.43 3.16
4427 8902 6.370593 TGCATTTTTCTGAGTTCGTATCAAC 58.629 36.000 0.00 0.00 0.00 3.18
4428 8903 6.552859 TGCATTTTTCTGAGTTCGTATCAA 57.447 33.333 0.00 0.00 0.00 2.57
4429 8904 6.552859 TTGCATTTTTCTGAGTTCGTATCA 57.447 33.333 0.00 0.00 0.00 2.15
4430 8905 9.554724 TTATTTGCATTTTTCTGAGTTCGTATC 57.445 29.630 0.00 0.00 0.00 2.24
4431 8906 9.559958 CTTATTTGCATTTTTCTGAGTTCGTAT 57.440 29.630 0.00 0.00 0.00 3.06
4432 8907 8.779303 TCTTATTTGCATTTTTCTGAGTTCGTA 58.221 29.630 0.00 0.00 0.00 3.43
4433 8908 7.648142 TCTTATTTGCATTTTTCTGAGTTCGT 58.352 30.769 0.00 0.00 0.00 3.85
4434 8909 8.679288 ATCTTATTTGCATTTTTCTGAGTTCG 57.321 30.769 0.00 0.00 0.00 3.95
5412 10652 9.635520 ATGAACTCAGAAAAATGCAAATAAGAG 57.364 29.630 0.00 0.00 0.00 2.85
5691 10931 9.546428 CTCCATGAAAATTAACTGAAAAGGTTT 57.454 29.630 0.00 0.00 0.00 3.27
5692 10932 8.704668 ACTCCATGAAAATTAACTGAAAAGGTT 58.295 29.630 0.00 0.00 0.00 3.50
5693 10933 8.250143 ACTCCATGAAAATTAACTGAAAAGGT 57.750 30.769 0.00 0.00 0.00 3.50
5694 10934 9.626045 GTACTCCATGAAAATTAACTGAAAAGG 57.374 33.333 0.00 0.00 0.00 3.11
5837 11077 4.142534 CCATAGAACTTGCTCCACAACATG 60.143 45.833 0.00 0.00 33.68 3.21
5838 11078 4.012374 CCATAGAACTTGCTCCACAACAT 58.988 43.478 0.00 0.00 33.68 2.71
5839 11079 3.072330 TCCATAGAACTTGCTCCACAACA 59.928 43.478 0.00 0.00 33.68 3.33
5840 11080 3.674997 TCCATAGAACTTGCTCCACAAC 58.325 45.455 0.00 0.00 33.68 3.32
5841 11081 3.869912 GCTCCATAGAACTTGCTCCACAA 60.870 47.826 0.00 0.00 36.62 3.33
5888 11128 3.944015 CCAGAACAAGAAAGGCTCCATAG 59.056 47.826 0.00 0.00 0.00 2.23
5980 11221 7.754624 AGAAGAGAGAAGAGAGGGAAATTTTT 58.245 34.615 0.00 0.00 0.00 1.94
5984 11225 6.730507 AGAAAGAAGAGAGAAGAGAGGGAAAT 59.269 38.462 0.00 0.00 0.00 2.17
5986 11227 5.650283 AGAAAGAAGAGAGAAGAGAGGGAA 58.350 41.667 0.00 0.00 0.00 3.97
6088 11329 8.991783 AGCAGTACTGGATAGTGTATTAACTA 57.008 34.615 23.95 0.00 37.78 2.24
6213 11454 9.643693 CTAATCCAGTTTCAAACTTGCAAATAT 57.356 29.630 0.00 0.00 40.46 1.28
6292 11533 7.561722 ACTCCAAGATGCTACTCTAACTATCAA 59.438 37.037 0.00 0.00 0.00 2.57
6387 11648 4.304110 GTTGCTGCAACAGTACAGTACTA 58.696 43.478 33.76 0.00 43.09 1.82
6408 11669 6.042781 TGAAGGAGTATTCAGTTTACACCTGT 59.957 38.462 1.44 0.00 38.99 4.00
6413 11674 8.486210 AGCATATGAAGGAGTATTCAGTTTACA 58.514 33.333 6.97 0.00 42.20 2.41
6501 11767 5.542635 AGGAGTAGACAAATGTGGACTACAA 59.457 40.000 18.24 0.00 43.77 2.41
6506 11772 5.351740 GCTAAAGGAGTAGACAAATGTGGAC 59.648 44.000 0.00 0.00 0.00 4.02
6527 11793 6.307776 ACTAGTATTGATGCACCTAGAGCTA 58.692 40.000 0.00 0.00 31.66 3.32
6545 11811 9.227777 GAATAAAAAGGAAGGAAGCAACTAGTA 57.772 33.333 0.00 0.00 0.00 1.82
6549 11815 6.209589 GGAGAATAAAAAGGAAGGAAGCAACT 59.790 38.462 0.00 0.00 0.00 3.16
6579 11845 3.189287 GTCACTCATCGAAAGCAACCATT 59.811 43.478 0.00 0.00 0.00 3.16
6602 11876 6.706270 TCGAAAATGACCTATTATTGCTCTCC 59.294 38.462 0.00 0.00 0.00 3.71
6635 11910 6.612456 TCCTCCAATGCTGATAAATTTTGGAT 59.388 34.615 0.00 0.00 41.13 3.41
6651 11926 5.664294 TGGAAACAATCAATCCTCCAATG 57.336 39.130 0.00 0.00 37.44 2.82
6717 11992 5.427157 TCAATAAGTTGGGCAGGTGAGTATA 59.573 40.000 0.00 0.00 35.99 1.47
6815 12091 8.152309 TGGAAACAAATGATTTGGAAACAATC 57.848 30.769 20.69 8.42 44.88 2.67
6841 12118 1.970640 GGAGTTGGGCAGGTGAATTTT 59.029 47.619 0.00 0.00 0.00 1.82
6865 12142 4.722700 TCCTTCCTTGCCGCTGCC 62.723 66.667 0.00 0.00 36.33 4.85
6866 12143 3.130160 CTCCTTCCTTGCCGCTGC 61.130 66.667 0.00 0.00 38.26 5.25
6867 12144 3.130160 GCTCCTTCCTTGCCGCTG 61.130 66.667 0.00 0.00 0.00 5.18
6868 12145 3.196207 TTGCTCCTTCCTTGCCGCT 62.196 57.895 0.00 0.00 0.00 5.52
6869 12146 2.672996 TTGCTCCTTCCTTGCCGC 60.673 61.111 0.00 0.00 0.00 6.53
6870 12147 2.680913 CGTTGCTCCTTCCTTGCCG 61.681 63.158 0.00 0.00 0.00 5.69
6871 12148 2.335712 CCGTTGCTCCTTCCTTGCC 61.336 63.158 0.00 0.00 0.00 4.52
6895 12172 0.670854 GGTCGTTGGTGCTTCTCCTC 60.671 60.000 0.00 0.00 0.00 3.71
6896 12173 1.371558 GGTCGTTGGTGCTTCTCCT 59.628 57.895 0.00 0.00 0.00 3.69
6921 12198 4.785453 CACCGCTGCTCCTTCCCC 62.785 72.222 0.00 0.00 0.00 4.81
6936 12213 1.026718 CGTTGATGCTTCTCCCCCAC 61.027 60.000 0.88 0.00 0.00 4.61
6937 12214 1.198094 TCGTTGATGCTTCTCCCCCA 61.198 55.000 0.88 0.00 0.00 4.96
6953 12233 3.663815 ATCCTCCGCTCAGGGTCGT 62.664 63.158 0.00 0.00 41.52 4.34
6962 12242 1.142748 CTCGAGCAAATCCTCCGCT 59.857 57.895 0.00 0.00 39.12 5.52
6984 12264 1.456518 TCGATCCTCTGCCCTCAGG 60.457 63.158 0.00 0.00 40.69 3.86
7032 12326 3.672295 CTTCCACCTCCGCCTCTGC 62.672 68.421 0.00 0.00 0.00 4.26
7033 12327 1.984570 TCTTCCACCTCCGCCTCTG 60.985 63.158 0.00 0.00 0.00 3.35
7034 12328 1.985116 GTCTTCCACCTCCGCCTCT 60.985 63.158 0.00 0.00 0.00 3.69
7035 12329 2.579738 GTCTTCCACCTCCGCCTC 59.420 66.667 0.00 0.00 0.00 4.70
7036 12330 3.382832 CGTCTTCCACCTCCGCCT 61.383 66.667 0.00 0.00 0.00 5.52
7037 12331 2.630592 GATCGTCTTCCACCTCCGCC 62.631 65.000 0.00 0.00 0.00 6.13
7038 12332 1.227002 GATCGTCTTCCACCTCCGC 60.227 63.158 0.00 0.00 0.00 5.54
7039 12333 1.064296 CGATCGTCTTCCACCTCCG 59.936 63.158 7.03 0.00 0.00 4.63
7040 12334 1.437986 CCGATCGTCTTCCACCTCC 59.562 63.158 15.09 0.00 0.00 4.30
7041 12335 1.437986 CCCGATCGTCTTCCACCTC 59.562 63.158 15.09 0.00 0.00 3.85
7055 12349 0.617535 TTGAATCCTCTGCTCCCCGA 60.618 55.000 0.00 0.00 0.00 5.14
7060 12354 4.272991 CAGCTACATTTGAATCCTCTGCTC 59.727 45.833 0.00 0.00 0.00 4.26
7068 12362 5.827797 TCATTACCCCAGCTACATTTGAATC 59.172 40.000 0.00 0.00 0.00 2.52
7071 12365 4.385199 CCTCATTACCCCAGCTACATTTGA 60.385 45.833 0.00 0.00 0.00 2.69
7082 12376 1.279846 GGAAACGACCTCATTACCCCA 59.720 52.381 0.00 0.00 0.00 4.96
7087 12381 4.310022 AATTGGGGAAACGACCTCATTA 57.690 40.909 0.00 0.00 40.37 1.90
7091 12385 2.888414 TGAAAATTGGGGAAACGACCTC 59.112 45.455 0.00 0.00 0.00 3.85
7105 12399 3.761897 TCCATCCGACCAAGTGAAAATT 58.238 40.909 0.00 0.00 0.00 1.82
7114 12408 0.257616 GGGGAAATCCATCCGACCAA 59.742 55.000 1.22 0.00 40.62 3.67
7123 12417 1.279846 GTAGGTCGTTGGGGAAATCCA 59.720 52.381 1.22 0.00 37.91 3.41
7131 12425 3.328382 TCTGAAATGTAGGTCGTTGGG 57.672 47.619 0.00 0.00 0.00 4.12
7143 12437 2.162408 GCTTTCCCTCCGTTCTGAAATG 59.838 50.000 0.00 0.00 0.00 2.32
7149 12443 0.984230 TGATGCTTTCCCTCCGTTCT 59.016 50.000 0.00 0.00 0.00 3.01
7151 12445 3.644966 TTATGATGCTTTCCCTCCGTT 57.355 42.857 0.00 0.00 0.00 4.44
7204 12498 2.738846 AGCACGACAATAGAAGCAAGTG 59.261 45.455 0.00 0.00 0.00 3.16
7205 12499 2.996621 GAGCACGACAATAGAAGCAAGT 59.003 45.455 0.00 0.00 0.00 3.16
7378 12677 6.968263 TTTAATTCAAACACAGGATCACCA 57.032 33.333 0.00 0.00 38.94 4.17
7406 12705 6.246420 AGCATATTTCAAAGTGTCTGTCAC 57.754 37.500 0.00 0.00 46.46 3.67
7409 12708 8.798859 AGATAAGCATATTTCAAAGTGTCTGT 57.201 30.769 0.00 0.00 0.00 3.41
7726 13025 6.038161 CAGGAACACAATGAACAAGACTTACA 59.962 38.462 0.00 0.00 0.00 2.41
7786 13085 9.320295 ACAATTCTTTGGGGAATAAGTTCATTA 57.680 29.630 0.00 0.00 37.15 1.90
7853 13152 8.371699 AGGGTAATGATCATTTCTAGTAGCTTC 58.628 37.037 25.26 5.21 32.50 3.86
7867 13166 4.591321 AAAAGGCAGAGGGTAATGATCA 57.409 40.909 0.00 0.00 0.00 2.92
7921 13220 5.710099 TCCATCAAGGAAACCAAAGTATGTC 59.290 40.000 0.00 0.00 45.65 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.